Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0008456

Physical Location & Seq

Genomic Coordinates Forward (+)

23871194 .. 23873166

Gene Structure 1973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG159900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCGTCCGCCGTCTTAGCGAATCGGAACGAACCCAATTGGCCACAGCAGCCCAGAGGCGGCGGCGGAGGCGGAGGATTCATGGGAAAAGTCCCTTTCTCAAACCCTAACCGTAACAACCCTAACCCTAAGACCAAATTCCAAGCTCATCATCATCATCATGCCGCCGATTTCAATGACGAGTCACCCGCCGTGACCCAGACGGCGTCCGACGACGCTTCGTCGATCAACCACCATCGGCGATCAAACACAACGAACACCGCCGCTGCCGATTTCAACCTCATTCAGTCCCAATACGTCAGCTTCAACGTCGCAACCTATTCAAGAAAAGAGCTCGTCGAGCTCAAGAATCGCCTTCTCTCTGAGCTCGACCAGATTCGTGTGCTCAAGAATCGAATCGAAGCCGGCGACTTCAATCCCAGGCCGGCCCAGCCCAAAAAGCCCAACACCACCAAGAAGATTGCTGGCTCGAAGCGGCCCTTGCCGATCGCCCCCGGCAAGGATTCGAATTCCAATTTGAAGCGATCGCATTCGGAGAATGTCAATTTGATGAAGAATTGTGGGCAGATTTTGTCCAAGCTGATGAAGCACAAGCACGCCTGGATCTTCAAAAAGCCGGTTGATGTGGTGACACTGAAGCTTCATGATTACCATGATATAATCAAGCACCCCATGGATCTGGGCACTGTCAAAATGAATCTATCCAAGAATTTGTATTCGACGCCATTGGAATTTGCTGCTGATGTGCGATTGACCTTTGAAAATGCCATGCGGTATAATCCCCGAGGCCATGATGTCTACAACTACGCCAATCAGCTTCGCTCTTTGTTTGAGGAGCTCTTCCAGCCCCTGATTGACAAATTGGGGGATGGGTTTGGTGGGGATCGAGGAGCTTCCGATGAGGAGGAATTGCAGGCCAGTTCTTGGAACCATGTTGAGCCTGAGAGGCATCCTCCTCCTCCGCCCAGGAGGGAAGACCCAATGCCCATGAAGATCGATAAGAAGACTGAGGTGGTTCGGCCCCCTCCGGCTTCAACCCCAGCTCCAGTCCCAGCCCCAGTGAGCTCATCAAATCCACCATTAGCTAATTCTCCAGTGAGGACAAGTTCGCAAGTGAAGGGGCCGCCGCAAGTGAAGCCCTTGAAGCAGCCGAAGCCAAAAGCAAAGGACCCAAACAAGAGGGATATGAGCATGGAGGAGAAGCATAAGCTGGGACTTGGGTTGCAGAGCTTGCCTCAGGAGAAAATGGAGCAAGTTGTGCAGATTATTAGAAAGAGGAATGGGCATTTAAAGCAGGATGGGGATGAGATTGAGCTTGACATTGAGGCTGTAGATACAGAAACCCTTTGGGAGCTTGATCGGCTTGTTACAAATTACAAAAAGATGGTTAGCAAGATTAAGCGTCAAGCACTGATGGGCAACAACAGCAATAGCAACATTGCTTCGAACAGAGGAGGTCAAGAGGAATTGCCTGCTAGTGAGAAAATTGATGTCTCAGCAGCAGAGCCGAAGAGGCCAAAGAAAGGGGAAGTGGGAGATGAAGATGTGGATATTGGTGATGACATGCCAATGAGCAGCTTTCCTCCGGTTGAGATTGAGAAAGATGTTGGGGGCAATGCCAGTAGTGATAATAGTTCAAGCAGCTCCGGCAGTTCAAGCAGTGGCTCCTCCTCATCAAGCGATTCAGATTCTGGCAGTTCTTCAGGGAGTGACTCGGATGATGACAACGCGCAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0007346 GO:0008150 GO:0009292 GO:0009294 GO:0009987 GO:0022622 GO:0032501 GO:0032502 GO:0044764 GO:0045787 GO:0045931 GO:0048364 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051704 GO:0051726 GO:0065007 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

579

Amino Acids

63.66

Weight (kDa)

7.81

Isoelectric Point (pI)

57.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	187 - 271	1.6e-21	Bromodomain
BET	PF17035	396 - 457	1.2e-21	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10550 AT5G65630
fragaria_vesca	FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150
malus_domestica	MD05G1049900.v1.1 MD10G1057000.v1.1
prunus_persica	Prupe.8G075200_v2.0.a1
pyrus_communis	pycom05g04180 pycom10g04390
rosa_chinensis	RchiOBHm_Chr6g0269471
rosa_laevigata	RLG00000013850
rosa_roxburghii	Rroxscaffold_7G00198710
rosa_rugosa	Rorug06G0048300 Rorug06G0048400
rosa_samantha	Rh6AG168300 Rh6BG173600 Rh6CG167900 Rh6DG159900
rosa_wichuraiana	Rw6G014490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	924
AccI	GTMKAC	1 cut(s)	798
AccII	CGCG	1 cut(s)	1730
AclWI	GGATC	3 cut(s)	611, 684, 891
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	4 cut(s)	137, 508, 709, 731
AcuI	CTGAAG	2 cut(s)	656, 1686
AcyI	GRCGYC	3 cut(s)	5, 206, 722
AfiI	CCNNNNNNNGG	4 cut(s)	59, 499, 924, 1523
AhdI	GACNNNNNGTC	1 cut(s)	220
AjnI	CCWGG	3 cut(s)	419, 599, 965
Alw21I	GWGCWC	6 cut(s)	336, 345, 369, 387, 840, 1067
Alw26I	GTCTC	1 cut(s)	1498
AlwI	GGATC	3 cut(s)	611, 684, 891
AlwNI	CAGNNNCTG	2 cut(s)	850, 1691
Ama87I	CYCGRG	1 cut(s)	783
AoxI	GGCC	9 cut(s)	41, 422, 426, 476, 787, 915, 1019, 1121, 1514
ApeKI	GCWGC	7 cut(s)	49, 266, 737, 1147, 1499, 1575, 1641
ApoI	RAATTY	4 cut(s)	137, 508, 709, 731
AsiSI	GCGATCGC	1 cut(s)	527
AspLEI	GCGC	1 cut(s)	1732
AspS9I	GGNCC	5 cut(s)	427, 477, 1020, 1121, 1168
AsuC2I	CCSGG	1 cut(s)	495
AsuHPI	GGTGA	3 cut(s)	177, 640, 1568
AsuII	TTCGAA	2 cut(s)	506, 1445
AvaI	CYCGRG	1 cut(s)	783
AvaII	GGWCC	1 cut(s)	1168
AxyI	CCTNAGG	1 cut(s)	1236
BaeGI	GKGCMC	1 cut(s)	686
BalI	TGGCCA	1 cut(s)	43
BanII	GRGCYC	5 cut(s)	336, 345, 369, 840, 1067
BbsI	GAAGAC	2 cut(s)	981, 1010
Bbv12I	GWGCWC	6 cut(s)	336, 345, 369, 387, 840, 1067
BbvI	GCAGC	7 cut(s)	61, 253, 724, 1159, 1511, 1587, 1653
BccI	CCATC	5 cut(s)	243, 863, 1292, 1378, 1408
BceAI	ACGGC	2 cut(s)	176, 219
BciT130I	CCWGG	3 cut(s)	421, 601, 967
BcnI	CCSGG	1 cut(s)	495
BcoDI	GTCTC	1 cut(s)	1498
BfaI	CTAG	2 cut(s)	1476, 1738
BfmI	CTRYAG	1 cut(s)	1329
BglI	GCCNNNNNGGC	2 cut(s)	946, 1513
Bme1390I	CCNGG	4 cut(s)	421, 495, 601, 967
Bme18I	GGWCC	1 cut(s)	1168
BmeRI	GACNNNNNGTC	1 cut(s)	220
BmeT110I	CYCGRG	1 cut(s)	783
BmgT120I	GGNCC	5 cut(s)	427, 477, 1020, 1121, 1168
BmiI	GGNNCC	5 cut(s)	929, 1022, 1122, 1170, 1666
BmrFI	CCNGG	4 cut(s)	421, 495, 601, 967
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	1 cut(s)	958
BmuI	ACTGGG	1 cut(s)	1052
BpiI	GAAGAC	2 cut(s)	981, 1010
BplI	GAGNNNNNCTC	4 cut(s)	937, 969, 1219, 1251
BpmI	CTGGAG	2 cut(s)	1029, 1077
Bpu14I	TTCGAA	2 cut(s)	506, 1445
BpuEI	CTTGAG	2 cut(s)	329, 371
BpuMI	CCSGG	1 cut(s)	495
Bsa29I	ATCGAT	1 cut(s)	996
BsaHI	GRCGYC	3 cut(s)	5, 206, 722
BsaJI	CCNNGG	5 cut(s)	419, 493, 672, 784, 965
BsaWI	WCCGGW	1 cut(s)	1585
BsaXI	ACNNNNNCTCC	2 cut(s)	1027, 1057
Bsc4I	CCNNNNNNNGG	4 cut(s)	59, 499, 924, 1523
Bse118I	RCCGGY	3 cut(s)	404, 424, 616
Bse1I	ACTGG	5 cut(s)	918, 1046, 1058, 1094, 1620
Bse21I	CCTNAGG	1 cut(s)	1236
Bse3DI	GCAATG	2 cut(s)	1437, 1621
BseBI	CCWGG	3 cut(s)	421, 601, 967
BseCI	ATCGAT	1 cut(s)	996
BseDI	CCNNGG	5 cut(s)	419, 493, 672, 784, 965
BseGI	GGATG	5 cut(s)	874, 949, 1303, 1309, 1723
BseLI	CCNNNNNNNGG	4 cut(s)	59, 499, 924, 1523
BseMI	GCAATG	2 cut(s)	1437, 1621
BseMII	CTCAG	5 cut(s)	354, 933, 999, 1250, 1509
BseNI	ACTGG	5 cut(s)	918, 1046, 1058, 1094, 1620
BseRI	GAGGAG	9 cut(s)	848, 903, 917, 945, 948, 1211, 1467, 1657, 1660
BseSI	GKGCMC	1 cut(s)	686
BseXI	GCAGC	7 cut(s)	61, 253, 724, 1159, 1511, 1587, 1653
BseYI	CCCAGC	4 cut(s)	429, 1039, 1051, 1210
BsgI	GTGCAG	1 cut(s)	1280
Bsh1236I	CGCG	1 cut(s)	1730
Bsh1285I	CGRYCG	2 cut(s)	489, 527
BshFI	GGCC	9 cut(s)	43, 424, 428, 478, 789, 917, 1021, 1123, 1516
BshVI	ATCGAT	1 cut(s)	996
BsiEI	CGRYCG	2 cut(s)	489, 527
BsiHKAI	GWGCWC	6 cut(s)	336, 345, 369, 387, 840, 1067
BsiHKCI	CYCGRG	1 cut(s)	783
BsiSI	CCGG	7 cut(s)	405, 425, 495, 617, 1028, 1586, 1647
BslFI	GGGAC	4 cut(s)	77, 274, 1034, 1227
BslI	CCNNNNNNNGG	4 cut(s)	59, 499, 924, 1523
BsmAI	GTCTC	1 cut(s)	1498
BsmFI	GGGAC	4 cut(s)	77, 274, 1034, 1227
BsmI	GAATGC	1 cut(s)	529
BsnI	GGCC	9 cut(s)	43, 424, 428, 478, 789, 917, 1021, 1123, 1516
BsoBI	CYCGRG	1 cut(s)	783
Bsp119I	TTCGAA	2 cut(s)	506, 1445
Bsp1286I	GDGCHC	7 cut(s)	336, 345, 369, 387, 686, 840, 1067
Bsp143I	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
Bsp19I	CCATGG	1 cut(s)	672
BspANI	GGCC	9 cut(s)	43, 424, 428, 478, 789, 917, 1021, 1123, 1516
BspCNI	CTCAG	5 cut(s)	355, 934, 1000, 1249, 1508
BspDI	ATCGAT	1 cut(s)	996
BspFNI	CGCG	1 cut(s)	1730
BspHI	TCATGA	1 cut(s)	643
BspLI	GGNNCC	5 cut(s)	929, 1022, 1122, 1170, 1666
BspPI	GGATC	3 cut(s)	611, 684, 891
BspQI	GCTCTTC	1 cut(s)	845
BspT104I	TTCGAA	2 cut(s)	506, 1445
BsrDI	GCAATG	2 cut(s)	1437, 1621
BsrFI	RCCGGY	3 cut(s)	404, 424, 616
BsrI	ACTGG	5 cut(s)	918, 1046, 1058, 1094, 1620
BssAI	RCCGGY	3 cut(s)	404, 424, 616
BssECI	CCNNGG	5 cut(s)	419, 493, 672, 784, 965
BssMI	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
BssNI	GRCGYC	3 cut(s)	5, 206, 722
BssT1I	CCWWGG	1 cut(s)	672
Bst2UI	CCWGG	3 cut(s)	421, 601, 967
Bst4CI	ACNGT	2 cut(s)	113, 688
Bst6I	CTCTTC	2 cut(s)	845, 1505
BstACI	GRCGYC	3 cut(s)	5, 206, 722
BstAPI	GCANNNNNTGC	2 cut(s)	1231, 1258
BstBI	TTCGAA	2 cut(s)	506, 1445
BstC8I	GCNNGC	7 cut(s)	406, 426, 466, 597, 915, 1232, 1473
BstDEI	CTNAG	7 cut(s)	16, 129, 363, 942, 1008, 1236, 1495
BstDSI	CCRYGG	1 cut(s)	672
BstF5I	GGATG	5 cut(s)	874, 949, 1303, 1309, 1723
BstFNI	CGCG	1 cut(s)	1730
BstHHI	GCGC	1 cut(s)	1732
BstKTI	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 996, 1360
BstMAI	GTCTC	1 cut(s)	1498
BstMBI	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
BstMCI	CGRYCG	2 cut(s)	489, 527
BstNI	CCWGG	3 cut(s)	421, 601, 967
BstNSI	RCATGY	1 cut(s)	1567
BstSCI	CCNGG	4 cut(s)	419, 493, 599, 965
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	686
BstUI	CGCG	1 cut(s)	1730
BstV1I	GCAGC	7 cut(s)	61, 253, 724, 1159, 1511, 1587, 1653
BstV2I	GAAGAC	2 cut(s)	981, 1010
BstX2I	RGATCY	2 cut(s)	603, 676
BstXI	CCANNNNNNTGG	1 cut(s)	679
BstYI	RGATCY	2 cut(s)	603, 676
Bsu15I	ATCGAT	1 cut(s)	996
Bsu36I	CCTNAGG	1 cut(s)	1236
BsuRI	GGCC	9 cut(s)	43, 424, 428, 478, 789, 917, 1021, 1123, 1516
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	1 cut(s)	672
BtsCI	GGATG	5 cut(s)	874, 949, 1303, 1309, 1723
BtsI	GCAGTG	1 cut(s)	1666
BtsIMutI	CAGTG	6 cut(s)	632, 684, 1065, 1101, 1409, 1666
Cac8I	GCNNGC	7 cut(s)	406, 426, 466, 597, 915, 1232, 1473
CaiI	CAGNNNCTG	2 cut(s)	850, 1691
CciI	TCATGA	1 cut(s)	643
CfoI	GCGC	1 cut(s)	1732
Cfr10I	RCCGGY	3 cut(s)	404, 424, 616
Cfr13I	GGNCC	5 cut(s)	427, 477, 1020, 1121, 1168
ClaI	ATCGAT	1 cut(s)	996
CseI	GACGC	4 cut(s)	195, 224, 730, 1391
DdeI	CTNAG	7 cut(s)	16, 129, 363, 942, 1008, 1236, 1495
DpnI	GATC	9 cut(s)	227, 244, 488, 526, 605, 678, 885, 995, 1359
DpnII	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
DraI	TTTAAA	1 cut(s)	1290
DriI	GACNNNNNGTC	1 cut(s)	220
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	2 cut(s)	845, 1505
Eam1105I	GACNNNNNGTC	1 cut(s)	220
EarI	CTCTTC	2 cut(s)	845, 1505
EciI	GGCGGA	3 cut(s)	81, 87, 951
Ecl136II	GAGCTC	5 cut(s)	334, 343, 367, 838, 1065
Eco130I	CCWWGG	1 cut(s)	672
Eco24I	GRGCYC	5 cut(s)	336, 345, 369, 840, 1067
Eco47I	GGWCC	1 cut(s)	1168
Eco53kI	GAGCTC	5 cut(s)	334, 343, 367, 838, 1065
Eco57I	CTGAAG	2 cut(s)	656, 1686
Eco81I	CCTNAGG	1 cut(s)	1236
Eco88I	CYCGRG	1 cut(s)	783
EcoICRI	GAGCTC	5 cut(s)	334, 343, 367, 838, 1065
EcoO109I	RGGNCCY	1 cut(s)	1168
EcoRI	GAATTC	1 cut(s)	508
EcoRII	CCWGG	3 cut(s)	419, 599, 965
EcoT14I	CCWWGG	1 cut(s)	672
EcoT38I	GRGCYC	5 cut(s)	336, 345, 369, 840, 1067
ErhI	CCWWGG	1 cut(s)	672
FalI	AAGNNNNNCTT	2 cut(s)	464, 496
FaqI	GGGAC	4 cut(s)	77, 274, 1034, 1227
FauI	CCCGC	1 cut(s)	196
FblI	GTMKAC	1 cut(s)	798
FokI	GGATG	5 cut(s)	881, 936, 1310, 1316, 1730
FriOI	GRGCYC	5 cut(s)	336, 345, 369, 840, 1067
FseI	GGCCGGCC	1 cut(s)	428
FspBI	CTAG	2 cut(s)	1476, 1738
GlaI	GCGC	1 cut(s)	1731
GsaI	CCCAGC	4 cut(s)	433, 1043, 1055, 1214
GsuI	CTGGAG	2 cut(s)	1029, 1077
HaeIII	GGCC	9 cut(s)	43, 424, 428, 478, 789, 917, 1021, 1123, 1516
HapII	CCGG	7 cut(s)	405, 425, 495, 617, 1028, 1586, 1647
HgaI	GACGC	4 cut(s)	195, 224, 730, 1391
HhaI	GCGC	1 cut(s)	1732
Hin1I	GRCGYC	3 cut(s)	5, 206, 722
Hin6I	GCGC	1 cut(s)	1730
HinP1I	GCGC	1 cut(s)	1730
HindIII	AAGCTT	1 cut(s)	638
HpaII	CCGG	7 cut(s)	405, 425, 495, 617, 1028, 1586, 1647
HphI	GGTGA	3 cut(s)	177, 640, 1568
Hpy166II	GTNNAC	1 cut(s)	799
Hpy188I	TCNGA	7 cut(s)	27, 211, 364, 535, 898, 1687, 1717
Hpy188III	TCNNGA	6 cut(s)	324, 346, 388, 644, 1238, 1460
Hpy8I	GTNNAC	1 cut(s)	799
Hpy99I	CGWCG	6 cut(s)	215, 218, 226, 314, 341, 724
HpyAV	CCTTC	2 cut(s)	365, 1111
HpyCH4III	ACNGT	2 cut(s)	113, 688
HpyCH4IV	ACGT	2 cut(s)	297, 309
HpyCH4V	TGCA	3 cut(s)	913, 1225, 1261
HpyF3I	CTNAG	7 cut(s)	16, 129, 363, 942, 1008, 1236, 1495
HpySE526I	ACGT	2 cut(s)	297, 309
Hsp92I	GRCGYC	3 cut(s)	5, 206, 722
HspAI	GCGC	1 cut(s)	1730
KroI	GCCGGC	2 cut(s)	404, 424
KroNI	GCCGGC	2 cut(s)	406, 426
Kzo9I	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
LguI	GCTCTTC	1 cut(s)	845
LmnI	GCTCC	7 cut(s)	835, 890, 1048, 1249, 1351, 1649, 1670
Lsp1109I	GCAGC	7 cut(s)	61, 253, 724, 1159, 1511, 1587, 1653
LweI	GCATC	1 cut(s)	958
MaeI	CTAG	2 cut(s)	1476, 1738
MaeII	ACGT	2 cut(s)	297, 309
MaeIII	GTNAC	6 cut(s)	113, 183, 193, 628, 1366, 1709
MalI	GATC	9 cut(s)	227, 244, 488, 526, 605, 678, 885, 995, 1359
MboI	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
MfeI	CAATTG	1 cut(s)	37
MflI	RGATCY	2 cut(s)	603, 676
MhlI	GDGCHC	7 cut(s)	336, 345, 369, 387, 686, 840, 1067
MlsI	TGGCCA	1 cut(s)	43
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	2 cut(s)	191, 1706
MmeI	TCCRAC	1 cut(s)	234
Mox20I	TGGCCA	1 cut(s)	43
MroNI	GCCGGC	2 cut(s)	404, 424
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	2 cut(s)	1289, 1398
MslI	CAYNNNNRTG	2 cut(s)	159, 1568
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	1 cut(s)	266
MspI	CCGG	7 cut(s)	405, 425, 495, 617, 1028, 1586, 1647
MspR9I	CCNGG	4 cut(s)	421, 495, 601, 967
MunI	CAATTG	1 cut(s)	37
Mva1269I	GAATGC	1 cut(s)	529
MvaI	CCWGG	3 cut(s)	421, 601, 967
MvnI	CGCG	1 cut(s)	1730
NaeI	GCCGGC	2 cut(s)	406, 426
NciI	CCSGG	1 cut(s)	495
NcoI	CCATGG	1 cut(s)	672
NdeII	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
NgoMIV	GCCGGC	2 cut(s)	404, 424
NlaIV	GGNNCC	5 cut(s)	929, 1022, 1122, 1170, 1666
NmuCI	GTSAC	4 cut(s)	183, 193, 628, 1709
NspI	RCATGY	1 cut(s)	1567
NspV	TTCGAA	2 cut(s)	506, 1445
PagI	TCATGA	1 cut(s)	643
PciSI	GCTCTTC	1 cut(s)	845
PcsI	WCGNNNNNNNCGW	1 cut(s)	405
PctI	GAATGC	1 cut(s)	529
PdiI	GCCGGC	2 cut(s)	406, 426
PflFI	GACNNNGTC	1 cut(s)	205
PflMI	CCANNNNNTGG	1 cut(s)	924
Ple19I	CGATCG	2 cut(s)	489, 527
PleI	GAGTC	2 cut(s)	190, 1706
PpsI	GAGTC	2 cut(s)	190, 1706
PpuMI	RGGWCCY	1 cut(s)	1168
Psp124BI	GAGCTC	5 cut(s)	336, 345, 369, 840, 1067
Psp5II	RGGWCCY	1 cut(s)	1168
Psp6I	CCWGG	3 cut(s)	419, 599, 965
PspFI	CCCAGC	4 cut(s)	429, 1039, 1051, 1210
PspGI	CCWGG	3 cut(s)	419, 599, 965
PspN4I	GGNNCC	5 cut(s)	929, 1022, 1122, 1170, 1666
PspPI	GGNCC	5 cut(s)	427, 477, 1020, 1121, 1168
PspPPI	RGGWCCY	1 cut(s)	1168
PstNI	CAGNNNCTG	2 cut(s)	850, 1691
PsuI	RGATCY	2 cut(s)	603, 676
PsyI	GACNNNGTC	1 cut(s)	205
PvuI	CGATCG	2 cut(s)	489, 527
RgaI	GCGATCGC	1 cut(s)	527
RigI	GGCCGGCC	1 cut(s)	428
RseI	CAYNNNNRTG	2 cut(s)	159, 1568
SacI	GAGCTC	5 cut(s)	336, 345, 369, 840, 1067
SapI	GCTCTTC	1 cut(s)	845
SaqAI	TTAA	2 cut(s)	1289, 1398
Sau3AI	GATC	9 cut(s)	225, 242, 486, 524, 603, 676, 883, 993, 1357
Sau96I	GGNCC	5 cut(s)	427, 477, 1020, 1121, 1168
SchI	GAGTC	2 cut(s)	191, 1706
ScrFI	CCNGG	4 cut(s)	421, 495, 601, 967
SduI	GDGCHC	7 cut(s)	336, 345, 369, 387, 686, 840, 1067
SfaAI	GCGATCGC	1 cut(s)	527
SfaNI	GCATC	1 cut(s)	958
SfcI	CTRYAG	1 cut(s)	1329
SfuI	TTCGAA	2 cut(s)	506, 1445
SgfI	GCGATCGC	1 cut(s)	527
SinI	GGWCC	1 cut(s)	1168
SmiMI	CAYNNNNRTG	2 cut(s)	159, 1568
SmlI	CTYRAG	2 cut(s)	344, 386
SmoI	CTYRAG	2 cut(s)	344, 386
SspMI	CTAG	2 cut(s)	1476, 1738
SstI	GAGCTC	5 cut(s)	336, 345, 369, 840, 1067
StyD4I	CCNGG	4 cut(s)	419, 493, 599, 965
StyI	CCWWGG	1 cut(s)	672
TaaI	ACNGT	2 cut(s)	113, 688
TaiI	ACGT	2 cut(s)	300, 312
TauI	GCSGC	7 cut(s)	63, 66, 167, 266, 478, 1126, 1129
Tru1I	TTAA	2 cut(s)	1289, 1398
Tru9I	TTAA	2 cut(s)	1289, 1398
TscAI	CASTG	6 cut(s)	639, 691, 1065, 1101, 1416, 1666
TseFI	GTSAC	4 cut(s)	183, 193, 628, 1709
TseI	GCWGC	7 cut(s)	49, 266, 737, 1147, 1499, 1575, 1641
Tsp45I	GTSAC	4 cut(s)	183, 193, 628, 1709
TspDTI	ATGAA	7 cut(s)	70, 566, 599, 632, 710, 1004, 1554
TspRI	CASTG	6 cut(s)	639, 691, 1065, 1101, 1416, 1666
Tth111I	GACNNNGTC	1 cut(s)	205
Van91I	CCANNNNNTGG	1 cut(s)	924
VpaK11BI	GGWCC	1 cut(s)	1168
XapI	RAATTY	4 cut(s)	137, 508, 709, 731
XceI	RCATGY	1 cut(s)	1567
XmiI	GTMKAC	1 cut(s)	798
XspI	CTAG	2 cut(s)	1476, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.