Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0012663

Physical Location & Seq

Genomic Coordinates Forward (+)

14237641 .. 14239207

Gene Structure 1567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G114700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGCTCACCATCGTTGCAATTGTCAAAGCATTTGGCATCAGCAACCTTGATAAGCCTACAAACCCTAGCAAGAAGCACTTTGTACTGGTTCATGGTTCCTGCTTTGGTGCTTGGTCATGGTACAAGCTTGTGACCTTAATGAAGTCATCTGGTCACAATGTCACTGCCATAGACCTAGCTGCTTCTGGGGTTGACCCTCAGCAGGCAAAAGATCTGCAATCAATTTCTGACTACTGCAAGCCCTTGACGGATTTCATGGCAGCTCTTGATCCTCCACATGATAAGGTCATCCTTGTTGGTCAGAGTCTTGACAGCAAATACACAAATGACCAAGGCCCAAACAATCCTCCAATCACTCTCATATTCGGCCCATTGTTCTTGGCAACAAACGTGTACCAACTCAGCCCAACTGAGGATGTAGCACTGGGCACCATGTTAATGAGACCTCAACGCTTGTTTAGTGAAGAGGACATGTGCAAAGAACTCAAGCTAACCCATGAGAATTACGAGTCGGTCAATCGGGTTTACGTCTTATCCGGCGGAGATTTGGTGGAGAAGAAGGATCTTCAACGGTGGATGATTAAGAGGAACAGGCCAAACAGTGTGGTGGAAATCACAGGATCTGATCACATGGTCATGATTTCTAAGCCATTAGAGCTGTGGGTGCATATCCAAAGAATTTCTGAGAAATATTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

233

Amino Acids

26.05

Weight (kDa)

6.65

Isoelectric Point (pI)

33.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012663)

Species	Orthologous Gene IDs
malus_domestica	MD05G1074300.v1.1
prunus_persica	Prupe.8G114700_v2.0.a1 Prupe.8G115000_v2.0.a1 Prupe.8G115300_v2.0.a1
pyrus_communis	pycom05g06700
rosa_chinensis	RchiOBHm_Chr4g0407461 RchiOBHm_Chr6g0259411 RchiOBHm_Chr6g0259431
rosa_laevigata	RLG00000014534
rosa_multiflora	Rmu_sc0006836.1_g000015 Rmu_ssc0000050.1_g000045
rosa_roxburghii	Rroxscaffold_7G00206700
rosa_rugosa	Rorug05G0588800 Rorug06G0097000
rosa_samantha	Rh6AG104500 Rh6BG097700 Rh6CG093600 Rh6DG087500
rosa_wichuraiana	Rw6G009030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	428
AciI	CCGC	1 cut(s)	540
AclWI	GGATC	3 cut(s)	263, 570, 628
AcsI	RAATTY	1 cut(s)	678
AfaI	GTAC	3 cut(s)	84, 122, 395
AfiI	CCNNNNNNNGG	2 cut(s)	202, 412
AflIII	ACRYGT	2 cut(s)	390, 471
AgsI	TTSAA	1 cut(s)	569
AluBI	AGCT	5 cut(s)	127, 179, 263, 490, 658
AluI	AGCT	5 cut(s)	127, 179, 263, 490, 658
Alw26I	GTCTC	1 cut(s)	436
AlwI	GGATC	3 cut(s)	263, 570, 628
AlwNI	CAGNNNCTG	1 cut(s)	623
AoxI	GGCC	3 cut(s)	334, 367, 593
ApeKI	GCWGC	2 cut(s)	179, 260
ApoI	RAATTY	1 cut(s)	678
AspS9I	GGNCC	2 cut(s)	335, 368
BaeGI	GKGCMC	1 cut(s)	431
BanI	GGYRCC	1 cut(s)	428
BbvCI	CCTCAGC	1 cut(s)	198
BbvI	GCAGC	2 cut(s)	166, 272
BccI	CCATC	1 cut(s)	17
BclI	TGATCA	1 cut(s)	625
BcoDI	GTCTC	1 cut(s)	436
BfaI	CTAG	2 cut(s)	66, 176
BglII	AGATCT	1 cut(s)	211
BisI	GCNGC	2 cut(s)	180, 261
BlsI	GCNGC	2 cut(s)	181, 262
BmgT120I	GGNCC	2 cut(s)	335, 368
BmiI	GGNNCC	2 cut(s)	97, 430
BmrI	ACTGGG	1 cut(s)	434
BmsI	GCATC	1 cut(s)	45
BmuI	ACTGGG	1 cut(s)	434
Bpu10I	CCTNAGC	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	470
BsaI	GGTCTC	1 cut(s)	436
BsaJI	CCNNGG	1 cut(s)	331
BsaXI	ACNNNNNCTCC	2 cut(s)	534, 564
Bsc4I	CCNNNNNNNGG	2 cut(s)	202, 412
Bse1I	ACTGG	2 cut(s)	90, 429
BseDI	CCNNGG	1 cut(s)	331
BseGI	GGATG	3 cut(s)	288, 421, 582
BseLI	CCNNNNNNNGG	2 cut(s)	202, 412
BseMII	CTCAG	4 cut(s)	212, 402, 415, 675
BseNI	ACTGG	2 cut(s)	90, 429
BseSI	GKGCMC	1 cut(s)	431
BseXI	GCAGC	2 cut(s)	166, 272
BshFI	GGCC	3 cut(s)	336, 369, 595
BshNI	GGYRCC	1 cut(s)	428
BsiSI	CCGG	1 cut(s)	537
BslI	CCNNNNNNNGG	2 cut(s)	202, 412
BsmAI	GTCTC	1 cut(s)	436
BsnI	GGCC	3 cut(s)	336, 369, 595
Bso31I	GGTCTC	1 cut(s)	436
Bsp1286I	GDGCHC	1 cut(s)	431
Bsp143I	GATC	5 cut(s)	211, 268, 562, 620, 625
BspACI	CCGC	1 cut(s)	540
BspANI	GGCC	3 cut(s)	336, 369, 595
BspCNI	CTCAG	4 cut(s)	211, 403, 414, 676
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	2 cut(s)	97, 430
BspPI	GGATC	3 cut(s)	263, 570, 628
BspT107I	GGYRCC	1 cut(s)	428
BspTNI	GGTCTC	1 cut(s)	436
BsrI	ACTGG	2 cut(s)	90, 429
BssECI	CCNNGG	1 cut(s)	331
BssMI	GATC	5 cut(s)	211, 268, 562, 620, 625
BssT1I	CCWWGG	1 cut(s)	331
Bst4CI	ACNGT	2 cut(s)	573, 602
Bst6I	CTCTTC	1 cut(s)	459
BstC8I	GCNNGC	2 cut(s)	204, 239
BstDEI	CTNAG	5 cut(s)	198, 401, 411, 645, 684
BstF5I	GGATG	3 cut(s)	288, 421, 582
BstKTI	GATC	5 cut(s)	214, 271, 565, 623, 628
BstMAI	GTCTC	1 cut(s)	436
BstMBI	GATC	5 cut(s)	211, 268, 562, 620, 625
BstMWI	GCNNNNNNNGC	2 cut(s)	655, 664
BstNSI	RCATGY	1 cut(s)	475
BstSLI	GKGCMC	1 cut(s)	431
BstV1I	GCAGC	2 cut(s)	166, 272
BstX2I	RGATCY	3 cut(s)	211, 562, 620
BstYI	RGATCY	3 cut(s)	211, 562, 620
BsuRI	GGCC	3 cut(s)	336, 369, 595
BtsCI	GGATG	3 cut(s)	288, 421, 582
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	3 cut(s)	162, 422, 607
Cac8I	GCNNGC	2 cut(s)	204, 239
CaiI	CAGNNNCTG	1 cut(s)	623
CciI	TCATGA	1 cut(s)	636
Cfr13I	GGNCC	2 cut(s)	335, 368
Csp6I	GTAC	3 cut(s)	83, 121, 394
CspCI	CAANNNNNGTGG	2 cut(s)	585, 620
CviAII	CATG	9 cut(s)	92, 117, 256, 278, 433, 472, 497, 631, 637
CviQI	GTAC	3 cut(s)	83, 121, 394
DdeI	CTNAG	5 cut(s)	198, 401, 411, 645, 684
DpnI	GATC	5 cut(s)	213, 270, 564, 622, 627
DpnII	GATC	5 cut(s)	211, 268, 562, 620, 625
Eam1104I	CTCTTC	1 cut(s)	459
EarI	CTCTTC	1 cut(s)	459
EciI	GGCGGA	1 cut(s)	555
Eco130I	CCWWGG	1 cut(s)	331
Eco31I	GGTCTC	1 cut(s)	436
EcoT14I	CCWWGG	1 cut(s)	331
ErhI	CCWWGG	1 cut(s)	331
FaeI	CATG	9 cut(s)	95, 120, 259, 281, 436, 475, 500, 634, 640
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FatI	CATG	9 cut(s)	91, 116, 255, 277, 432, 471, 496, 630, 636
FbaI	TGATCA	1 cut(s)	625
Fnu4HI	GCNGC	2 cut(s)	180, 261
FokI	GGATG	3 cut(s)	275, 428, 589
Fsp4HI	GCNGC	2 cut(s)	180, 261
FspBI	CTAG	2 cut(s)	66, 176
GluI	GCNGC	2 cut(s)	180, 261
HaeIII	GGCC	3 cut(s)	336, 369, 595
HapII	CCGG	1 cut(s)	537
Hin1II	CATG	9 cut(s)	95, 120, 259, 281, 436, 475, 500, 634, 640
HincII	GTYRAC	1 cut(s)	193
HindII	GTYRAC	1 cut(s)	193
HindIII	AAGCTT	1 cut(s)	125
HinfI	GANTC	2 cut(s)	304, 509
HpaII	CCGG	1 cut(s)	537
Hpy166II	GTNNAC	3 cut(s)	193, 394, 526
Hpy188I	TCNGA	4 cut(s)	229, 303, 625, 685
Hpy188III	TCNNGA	3 cut(s)	266, 308, 637
Hpy8I	GTNNAC	3 cut(s)	193, 394, 526
HpyAV	CCTTC	1 cut(s)	553
HpyCH4III	ACNGT	2 cut(s)	573, 602
HpyCH4IV	ACGT	2 cut(s)	390, 528
HpyCH4V	TGCA	5 cut(s)	17, 217, 237, 477, 667
HpyF10VI	GCNNNNNNNGC	2 cut(s)	655, 664
HpyF3I	CTNAG	5 cut(s)	198, 401, 411, 645, 684
HpySE526I	ACGT	2 cut(s)	390, 528
Hsp92II	CATG	9 cut(s)	95, 120, 259, 281, 436, 475, 500, 634, 640
Ksp22I	TGATCA	1 cut(s)	625
Kzo9I	GATC	5 cut(s)	211, 268, 562, 620, 625
LpnPI	CCDG	9 cut(s)	71, 112, 135, 171, 188, 410, 550, 577, 603
Lsp1109I	GCAGC	2 cut(s)	166, 272
LweI	GCATC	1 cut(s)	45
MaeI	CTAG	2 cut(s)	66, 176
MaeII	ACGT	2 cut(s)	390, 528
MaeIII	GTNAC	3 cut(s)	130, 152, 160
MalI	GATC	5 cut(s)	213, 270, 564, 622, 627
MboI	GATC	5 cut(s)	211, 268, 562, 620, 625
MboII	GAAGA	3 cut(s)	476, 557, 568
MfeI	CAATTG	1 cut(s)	18
MflI	RGATCY	3 cut(s)	211, 562, 620
MhlI	GDGCHC	1 cut(s)	431
MluCI	AATT	4 cut(s)	18, 222, 502, 678
MlyI	GAGTC	2 cut(s)	313, 518
MnlI	CCTC	7 cut(s)	207, 282, 357, 406, 456, 460, 579
MseI	TTAA	3 cut(s)	137, 437, 582
MslI	CAYNNNNRTG	2 cut(s)	437, 635
MspI	CCGG	1 cut(s)	537
MunI	CAATTG	1 cut(s)	18
MwoI	GCNNNNNNNGC	2 cut(s)	655, 664
NdeII	GATC	5 cut(s)	211, 268, 562, 620, 625
NlaIII	CATG	9 cut(s)	95, 120, 259, 281, 436, 475, 500, 634, 640
NlaIV	GGNNCC	2 cut(s)	97, 430
NmuCI	GTSAC	3 cut(s)	130, 152, 160
NspI	RCATGY	1 cut(s)	475
PagI	TCATGA	1 cut(s)	636
PciI	ACATGT	1 cut(s)	471
PkrI	GCNGC	2 cut(s)	181, 262
PleI	GAGTC	2 cut(s)	312, 517
PpsI	GAGTC	2 cut(s)	312, 517
PscI	ACATGT	1 cut(s)	471
PspN4I	GGNNCC	2 cut(s)	97, 430
PspPI	GGNCC	2 cut(s)	335, 368
PstNI	CAGNNNCTG	1 cut(s)	623
PsuI	RGATCY	3 cut(s)	211, 562, 620
RsaI	GTAC	3 cut(s)	84, 122, 395
RsaNI	GTAC	3 cut(s)	83, 121, 394
RseI	CAYNNNNRTG	2 cut(s)	437, 635
SaqAI	TTAA	3 cut(s)	137, 437, 582
SatI	GCNGC	2 cut(s)	180, 261
Sau3AI	GATC	5 cut(s)	211, 268, 562, 620, 625
Sau96I	GGNCC	2 cut(s)	335, 368
SchI	GAGTC	2 cut(s)	313, 518
SduI	GDGCHC	1 cut(s)	431
SfaNI	GCATC	1 cut(s)	45
SmiMI	CAYNNNNRTG	2 cut(s)	437, 635
SmlI	CTYRAG	1 cut(s)	485
SmoI	CTYRAG	1 cut(s)	485
Sse9I	AATT	4 cut(s)	18, 222, 502, 678
SsiI	CCGC	1 cut(s)	540
SspI	AATATT	1 cut(s)	692
SspMI	CTAG	2 cut(s)	66, 176
StyI	CCWWGG	1 cut(s)	331
TaaI	ACNGT	2 cut(s)	573, 602
TaiI	ACGT	2 cut(s)	393, 531
TaqII	GACCGA	1 cut(s)	502
TasI	AATT	4 cut(s)	18, 222, 502, 678
TatI	WGTACW	1 cut(s)	82
Tru1I	TTAA	3 cut(s)	137, 437, 582
Tru9I	TTAA	3 cut(s)	137, 437, 582
TscAI	CASTG	3 cut(s)	169, 429, 607
TseFI	GTSAC	3 cut(s)	130, 152, 160
TseI	GCWGC	2 cut(s)	179, 260
Tsp45I	GTSAC	3 cut(s)	130, 152, 160
TspDTI	ATGAA	3 cut(s)	80, 155, 244
TspGWI	ACGGA	1 cut(s)	263
TspRI	CASTG	3 cut(s)	169, 429, 607
XapI	RAATTY	1 cut(s)	678
XceI	RCATGY	1 cut(s)	475
XcmI	CCANNNNNNNNNTGG	1 cut(s)	657
XspI	CTAG	2 cut(s)	66, 176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.