Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0012663

Physical Location & Seq

Genomic Coordinates Forward (+)

14246801 .. 14248411

Gene Structure 1611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G115000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 870 bp

ATGGATCAAAGAAAGAAAATTTTGATCAAATCAATCTCTACTTTGCTGATCATTCTTCTCTGTGCAGCAAATATAACAGAATCAACAAACCCTAGCAAGAAGCACTTTGTACTGGTTCATGGTTCCTGCTTTGGTGCTTGGTCATGGTACAAGCTTGTGACCTTAATGAAGTCATCTGGTCACAATGTCACTGCCATAGACCTAGCTGCTTCTGGGGTTGACCCACAGCAGGCAAAAGATCTGCAATCAATTTCTGACTACTTCAAGCCCTTGACGGATTTCATGGCAGCTCTTGATCCACCACATGATAAGGTCATCCTTGTTGGTCACAGTCTTGGTGGGTTGGCCATTTCTCATGCCATGGAAAGATTTCCAGATAAGATATCTCTAGCTGTTTTCGTCACTGCCTTAATGCCTGGCCCAACCCTCAACATCTCCACTCTTAATCAAGAGTCGTTCAGAAGACAAGGATCTCTATTAGACAGTAAATACACATATGACCAAGGCCCAAACAATCCTCCAATCACTCTCACATTCGGCCCATTGTTCTTGGCAACAAACATGTACCAACTCAGCCCAACTGAGGATGTAGCACTAGGCACCATATTAATGAGACCTCAACGCTTGTTTAGTGAAGAGGACCTGTCCAAAGAACTCAAGCTAACCCGTGAGAAATATGGGTCGGTCAATCGAGTTTACGTCTTATCCGGCGGAGATTTATTGACGGAGAAGGATCTCCAACGGTGGATGATTAAGAGGAACAGGCCAAACAGTGTGGTGGAAATCACAGGATCTGATCACATGGTCATGATTTCTAAGCCATTAGAGCTGTGGGTGCATATCCAAAGAATTTCTGAAAAATATTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

290

Amino Acids

32.33

Weight (kDa)

8.72

Isoelectric Point (pI)

42.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012663)

Species	Orthologous Gene IDs
malus_domestica	MD05G1074300.v1.1
prunus_persica	Prupe.8G114700_v2.0.a1 Prupe.8G115000_v2.0.a1 Prupe.8G115300_v2.0.a1
pyrus_communis	pycom05g06700
rosa_chinensis	RchiOBHm_Chr4g0407461 RchiOBHm_Chr6g0259411 RchiOBHm_Chr6g0259431
rosa_laevigata	RLG00000014534
rosa_multiflora	Rmu_sc0006836.1_g000015 Rmu_ssc0000050.1_g000045
rosa_roxburghii	Rroxscaffold_7G00206700
rosa_rugosa	Rorug05G0588800 Rorug06G0097000
rosa_samantha	Rh6AG104500 Rh6BG097700 Rh6CG093600 Rh6DG087500
rosa_wichuraiana	Rw6G009030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	599
AciI	CCGC	1 cut(s)	711
AclWI	GGATC	5 cut(s)	12, 290, 478, 741, 799
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	2 cut(s)	18, 849
AfaI	GTAC	3 cut(s)	111, 149, 566
AfiI	CCNNNNNNNGG	2 cut(s)	229, 583
AflIII	ACRYGT	1 cut(s)	561
AgsI	TTSAA	1 cut(s)	265
AjnI	CCWGG	1 cut(s)	415
AluBI	AGCT	6 cut(s)	154, 206, 290, 392, 661, 829
AluI	AGCT	6 cut(s)	154, 206, 290, 392, 661, 829
Alw26I	GTCTC	1 cut(s)	607
AlwI	GGATC	5 cut(s)	12, 290, 478, 741, 799
AlwNI	CAGNNNCTG	1 cut(s)	794
AoxI	GGCC	5 cut(s)	345, 418, 505, 538, 764
ApeKI	GCWGC	3 cut(s)	65, 206, 287
ApoI	RAATTY	2 cut(s)	18, 849
AseI	ATTAAT	1 cut(s)	608
Asp700I	GAANNNNTTC	1 cut(s)	369
AspS9I	GGNCC	4 cut(s)	419, 506, 539, 640
AvaII	GGWCC	1 cut(s)	640
BalI	TGGCCA	1 cut(s)	347
BanI	GGYRCC	1 cut(s)	599
BbsI	GAAGAC	1 cut(s)	469
BbvI	GCAGC	3 cut(s)	77, 193, 299
BciT130I	CCWGG	1 cut(s)	417
BclI	TGATCA	3 cut(s)	24, 48, 796
BcoDI	GTCTC	1 cut(s)	607
BfaI	CTAG	4 cut(s)	93, 203, 389, 596
BglII	AGATCT	1 cut(s)	238
BisI	GCNGC	3 cut(s)	66, 207, 288
BlsI	GCNGC	3 cut(s)	67, 208, 289
Bme1390I	CCNGG	1 cut(s)	417
Bme18I	GGWCC	1 cut(s)	640
BmgT120I	GGNCC	4 cut(s)	419, 506, 539, 640
BmiI	GGNNCC	2 cut(s)	124, 601
BmrFI	CCNGG	1 cut(s)	417
BpiI	GAAGAC	1 cut(s)	469
BpuEI	CTTGAG	1 cut(s)	641
BsaI	GGTCTC	1 cut(s)	607
BsaJI	CCNNGG	2 cut(s)	360, 502
Bsc4I	CCNNNNNNNGG	2 cut(s)	229, 583
Bse1I	ACTGG	1 cut(s)	117
BseBI	CCWGG	1 cut(s)	417
BseDI	CCNNGG	2 cut(s)	360, 502
BseGI	GGATG	3 cut(s)	315, 592, 753
BseLI	CCNNNNNNNGG	2 cut(s)	229, 583
BseMII	CTCAG	2 cut(s)	573, 586
BseNI	ACTGG	1 cut(s)	117
BseXI	GCAGC	3 cut(s)	77, 193, 299
BsgI	GTGCAG	1 cut(s)	84
BshFI	GGCC	5 cut(s)	347, 420, 507, 540, 766
BshNI	GGYRCC	1 cut(s)	599
BsiSI	CCGG	1 cut(s)	708
BslI	CCNNNNNNNGG	2 cut(s)	229, 583
BsmAI	GTCTC	1 cut(s)	607
BsnI	GGCC	5 cut(s)	347, 420, 507, 540, 766
Bso31I	GGTCTC	1 cut(s)	607
Bsp143I	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
Bsp19I	CCATGG	1 cut(s)	360
BspACI	CCGC	1 cut(s)	711
BspANI	GGCC	5 cut(s)	347, 420, 507, 540, 766
BspCNI	CTCAG	2 cut(s)	574, 585
BspHI	TCATGA	1 cut(s)	807
BspLI	GGNNCC	2 cut(s)	124, 601
BspPI	GGATC	5 cut(s)	12, 290, 478, 741, 799
BspT107I	GGYRCC	1 cut(s)	599
BspTNI	GGTCTC	1 cut(s)	607
BsrI	ACTGG	1 cut(s)	117
BssECI	CCNNGG	2 cut(s)	360, 502
BssMI	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
BssT1I	CCWWGG	2 cut(s)	360, 502
Bst2UI	CCWGG	1 cut(s)	417
Bst4CI	ACNGT	4 cut(s)	332, 485, 744, 773
Bst6I	CTCTTC	1 cut(s)	630
BstC8I	GCNNGC	1 cut(s)	231
BstDEI	CTNAG	3 cut(s)	572, 582, 816
BstDSI	CCRYGG	1 cut(s)	360
BstF5I	GGATG	3 cut(s)	315, 592, 753
BstKTI	GATC	9 cut(s)	7, 27, 51, 241, 298, 473, 736, 794, 799
BstMAI	GTCTC	1 cut(s)	607
BstMBI	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
BstMWI	GCNNNNNNNGC	2 cut(s)	826, 835
BstNI	CCWGG	1 cut(s)	417
BstNSI	RCATGY	1 cut(s)	565
BstSCI	CCNGG	1 cut(s)	415
BstV1I	GCAGC	3 cut(s)	77, 193, 299
BstV2I	GAAGAC	1 cut(s)	469
BstX2I	RGATCY	4 cut(s)	238, 470, 733, 791
BstYI	RGATCY	4 cut(s)	238, 470, 733, 791
BsuRI	GGCC	5 cut(s)	347, 420, 507, 540, 766
BtgI	CCRYGG	1 cut(s)	360
BtsCI	GGATG	3 cut(s)	315, 592, 753
BtsI	GCAGTG	2 cut(s)	189, 402
BtsIMutI	CAGTG	3 cut(s)	189, 402, 778
Cac8I	GCNNGC	1 cut(s)	231
CaiI	CAGNNNCTG	1 cut(s)	794
CciI	TCATGA	1 cut(s)	807
Cfr13I	GGNCC	4 cut(s)	419, 506, 539, 640
Csp6I	GTAC	3 cut(s)	110, 148, 565
CspCI	CAANNNNNGTGG	2 cut(s)	756, 791
CviAII	CATG	9 cut(s)	119, 144, 283, 305, 356, 361, 562, 802, 808
CviQI	GTAC	3 cut(s)	110, 148, 565
DdeI	CTNAG	3 cut(s)	572, 582, 816
DpnI	GATC	9 cut(s)	6, 26, 50, 240, 297, 472, 735, 793, 798
DpnII	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	1 cut(s)	630
EarI	CTCTTC	1 cut(s)	630
EciI	GGCGGA	1 cut(s)	726
Eco130I	CCWWGG	2 cut(s)	360, 502
Eco31I	GGTCTC	1 cut(s)	607
Eco32I	GATATC	1 cut(s)	384
Eco47I	GGWCC	1 cut(s)	640
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRII	CCWGG	1 cut(s)	415
EcoRV	GATATC	1 cut(s)	384
EcoT14I	CCWWGG	2 cut(s)	360, 502
ErhI	CCWWGG	2 cut(s)	360, 502
FaeI	CATG	9 cut(s)	122, 147, 286, 308, 359, 364, 565, 805, 811
FalI	AAGNNNNNCTT	2 cut(s)	89, 121
FatI	CATG	9 cut(s)	118, 143, 282, 304, 355, 360, 561, 801, 807
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	3 cut(s)	24, 48, 796
Fnu4HI	GCNGC	3 cut(s)	66, 207, 288
FokI	GGATG	3 cut(s)	302, 599, 760
Fsp4HI	GCNGC	3 cut(s)	66, 207, 288
FspBI	CTAG	4 cut(s)	93, 203, 389, 596
GluI	GCNGC	3 cut(s)	66, 207, 288
HaeIII	GGCC	5 cut(s)	347, 420, 507, 540, 766
HapII	CCGG	1 cut(s)	708
Hin1II	CATG	9 cut(s)	122, 147, 286, 308, 359, 364, 565, 805, 811
HincII	GTYRAC	1 cut(s)	220
HindII	GTYRAC	1 cut(s)	220
HindIII	AAGCTT	1 cut(s)	152
HinfI	GANTC	2 cut(s)	80, 452
HpaII	CCGG	1 cut(s)	708
Hpy166II	GTNNAC	2 cut(s)	220, 697
Hpy188I	TCNGA	4 cut(s)	256, 461, 796, 856
Hpy188III	TCNNGA	4 cut(s)	293, 374, 449, 808
Hpy8I	GTNNAC	2 cut(s)	220, 697
HpyAV	CCTTC	1 cut(s)	724
HpyCH4III	ACNGT	4 cut(s)	332, 485, 744, 773
HpyCH4IV	ACGT	1 cut(s)	699
HpyCH4V	TGCA	3 cut(s)	65, 244, 838
HpyF10VI	GCNNNNNNNGC	2 cut(s)	826, 835
HpyF3I	CTNAG	3 cut(s)	572, 582, 816
HpySE526I	ACGT	1 cut(s)	699
Hsp92II	CATG	9 cut(s)	122, 147, 286, 308, 359, 364, 565, 805, 811
Ksp22I	TGATCA	3 cut(s)	24, 48, 796
Kzo9I	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
Lsp1109I	GCAGC	3 cut(s)	77, 193, 299
MaeI	CTAG	4 cut(s)	93, 203, 389, 596
MaeII	ACGT	1 cut(s)	699
MaeIII	GTNAC	5 cut(s)	157, 179, 187, 326, 400
MalI	GATC	9 cut(s)	6, 26, 50, 240, 297, 472, 735, 793, 798
MboI	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
MboII	GAAGA	3 cut(s)	47, 474, 647
MflI	RGATCY	4 cut(s)	238, 470, 733, 791
MlsI	TGGCCA	1 cut(s)	347
MluCI	AATT	3 cut(s)	18, 249, 849
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	1 cut(s)	461
MmeI	TCCRAC	1 cut(s)	763
MnlI	CCTC	6 cut(s)	437, 528, 577, 627, 631, 750
Mox20I	TGGCCA	1 cut(s)	347
MroXI	GAANNNNTTC	1 cut(s)	369
MscI	TGGCCA	1 cut(s)	347
MseI	TTAA	5 cut(s)	164, 410, 444, 608, 753
MslI	CAYNNNNRTG	2 cut(s)	608, 806
Msp20I	TGGCCA	1 cut(s)	347
MspI	CCGG	1 cut(s)	708
MspR9I	CCNGG	1 cut(s)	417
MvaI	CCWGG	1 cut(s)	417
MwoI	GCNNNNNNNGC	2 cut(s)	826, 835
NcoI	CCATGG	1 cut(s)	360
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
NlaIII	CATG	9 cut(s)	122, 147, 286, 308, 359, 364, 565, 805, 811
NlaIV	GGNNCC	2 cut(s)	124, 601
NmuCI	GTSAC	5 cut(s)	157, 179, 187, 326, 400
NspI	RCATGY	1 cut(s)	565
PagI	TCATGA	1 cut(s)	807
PciI	ACATGT	1 cut(s)	561
PdmI	GAANNNNTTC	1 cut(s)	369
PfeI	GAWTC	1 cut(s)	80
PkrI	GCNGC	3 cut(s)	67, 208, 289
PleI	GAGTC	1 cut(s)	460
PpsI	GAGTC	1 cut(s)	460
PpuMI	RGGWCCY	1 cut(s)	640
PscI	ACATGT	1 cut(s)	561
PshBI	ATTAAT	1 cut(s)	608
Psp5II	RGGWCCY	1 cut(s)	640
Psp6I	CCWGG	1 cut(s)	415
PspGI	CCWGG	1 cut(s)	415
PspN4I	GGNNCC	2 cut(s)	124, 601
PspPI	GGNCC	4 cut(s)	419, 506, 539, 640
PspPPI	RGGWCCY	1 cut(s)	640
PstNI	CAGNNNCTG	1 cut(s)	794
PsuI	RGATCY	4 cut(s)	238, 470, 733, 791
RsaI	GTAC	3 cut(s)	111, 149, 566
RsaNI	GTAC	3 cut(s)	110, 148, 565
RseI	CAYNNNNRTG	2 cut(s)	608, 806
SaqAI	TTAA	5 cut(s)	164, 410, 444, 608, 753
SatI	GCNGC	3 cut(s)	66, 207, 288
Sau3AI	GATC	9 cut(s)	4, 24, 48, 238, 295, 470, 733, 791, 796
Sau96I	GGNCC	4 cut(s)	419, 506, 539, 640
SchI	GAGTC	1 cut(s)	461
ScrFI	CCNGG	1 cut(s)	417
SinI	GGWCC	1 cut(s)	640
SmiMI	CAYNNNNRTG	2 cut(s)	608, 806
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
Sse9I	AATT	3 cut(s)	18, 249, 849
SsiI	CCGC	1 cut(s)	711
SspI	AATATT	1 cut(s)	863
SspMI	CTAG	4 cut(s)	93, 203, 389, 596
StyD4I	CCNGG	1 cut(s)	415
StyI	CCWWGG	2 cut(s)	360, 502
TaaI	ACNGT	4 cut(s)	332, 485, 744, 773
TaiI	ACGT	1 cut(s)	702
TaqI	TCGA	1 cut(s)	691
TaqII	GACCGA	1 cut(s)	673
TasI	AATT	3 cut(s)	18, 249, 849
TatI	WGTACW	1 cut(s)	109
TfiI	GAWTC	1 cut(s)	80
Tru1I	TTAA	5 cut(s)	164, 410, 444, 608, 753
Tru9I	TTAA	5 cut(s)	164, 410, 444, 608, 753
TscAI	CASTG	3 cut(s)	196, 409, 778
TseFI	GTSAC	5 cut(s)	157, 179, 187, 326, 400
TseI	GCWGC	3 cut(s)	65, 206, 287
Tsp45I	GTSAC	5 cut(s)	157, 179, 187, 326, 400
TspDTI	ATGAA	3 cut(s)	107, 182, 271
TspGWI	ACGGA	2 cut(s)	290, 740
TspRI	CASTG	3 cut(s)	196, 409, 778
VpaK11BI	GGWCC	1 cut(s)	640
VspI	ATTAAT	1 cut(s)	608
XapI	RAATTY	2 cut(s)	18, 849
XceI	RCATGY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	828
XmnI	GAANNNNTTC	1 cut(s)	369
XspI	CTAG	4 cut(s)	93, 203, 389, 596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.