RchiOBHm_Chr4g0407461

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
29700467 .. 29702405
1939 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37869

Sequence Viewer

Length: 279 bp
ATGGTTTTAGGCAACATAACTGCAGTGGTCAATAATCTCATCTGGGTTTTATCTGTTTTGGGTGATTTGGGATTGGGTTTCTGGGGTTTTGTTCTTTGGTGGGTTGTGAATTTGGTTTATTGGGTTTTGATATTGGTTATTTCTGCGCTGAGATTTTCTGTGGATTATAGAAAGCAGCCTTTCTCTTTTGTCTTTCGTTTGAGTACTTGTTGCCCCTCCACAAGTGCTTTGCCATTGCGATTAATCTATATACATGATATGCTAAAATATGAGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

92

Amino Acids

10.67

Weight (kDa)

8.71

Isoelectric Point (pI)

25.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 109
AfaI GTAC 1 cut(s) 205
ApeKI GCWGC 1 cut(s) 175
ApoI RAATTY 1 cut(s) 109
AseI ATTAAT 1 cut(s) 242
AspLEI GCGC 1 cut(s) 148
AsuHPI GGTGA 1 cut(s) 74
BbvI GCAGC 1 cut(s) 187
BfmI CTRYAG 1 cut(s) 21
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
BmcAI AGTACT 1 cut(s) 205
Bse3DI GCAATG 1 cut(s) 233
BseMI GCAATG 1 cut(s) 233
BseMII CTCAG 1 cut(s) 140
BseXI GCAGC 1 cut(s) 187
BspCNI CTCAG 1 cut(s) 141
BspMAI CTGCAG 1 cut(s) 25
BsrDI GCAATG 1 cut(s) 233
BstDEI CTNAG 1 cut(s) 149
BstHHI GCGC 1 cut(s) 148
BstSFI CTRYAG 1 cut(s) 21
BstV1I GCAGC 1 cut(s) 187
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 30
CfoI GCGC 1 cut(s) 148
Csp6I GTAC 1 cut(s) 204
CviAII CATG 1 cut(s) 254
CviJI RGCY 1 cut(s) 178
CviKI_1 RGCY 1 cut(s) 178
CviQI GTAC 1 cut(s) 204
DdeI CTNAG 1 cut(s) 149
FaeI CATG 1 cut(s) 257
FaiI YATR 7 cut(s) 17, 168, 249, 251, 255, 260, 270
FatI CATG 1 cut(s) 253
Fnu4HI GCNGC 1 cut(s) 176
Fsp4HI GCNGC 1 cut(s) 176
GlaI GCGC 1 cut(s) 147
GluI GCNGC 1 cut(s) 176
HhaI GCGC 1 cut(s) 148
Hin1II CATG 1 cut(s) 257
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HphI GGTGA 1 cut(s) 74
HpyCH4V TGCA 1 cut(s) 23
HpyF3I CTNAG 1 cut(s) 149
Hsp92II CATG 1 cut(s) 257
HspAI GCGC 1 cut(s) 146
LpnPI CCDG 2 cut(s) 28, 67
Lsp1109I GCAGC 1 cut(s) 187
MluCI AATT 1 cut(s) 109
MnlI CCTC 1 cut(s) 226
MseI TTAA 1 cut(s) 242
NlaIII CATG 1 cut(s) 257
PkrI GCNGC 1 cut(s) 177
PshBI ATTAAT 1 cut(s) 242
PstI CTGCAG 1 cut(s) 25
RsaI GTAC 1 cut(s) 205
RsaNI GTAC 1 cut(s) 204
SaqAI TTAA 1 cut(s) 242
SatI GCNGC 1 cut(s) 176
ScaI AGTACT 1 cut(s) 205
SfcI CTRYAG 1 cut(s) 21
SgeI CNNG 5 cut(s) 55, 94, 219, 234, 266
Sse9I AATT 1 cut(s) 109
TasI AATT 1 cut(s) 109
TatI WGTACW 1 cut(s) 203
Tru1I TTAA 1 cut(s) 242
Tru9I TTAA 1 cut(s) 242
TscAI CASTG 1 cut(s) 30
TseI GCWGC 1 cut(s) 175
TspRI CASTG 1 cut(s) 30
VspI ATTAAT 1 cut(s) 242
XapI RAATTY 1 cut(s) 109
ZrmI AGTACT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.