Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0006096

Physical Location & Seq

Genomic Coordinates Forward (+)

17051359 .. 17055253

Gene Structure 3895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G163200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 828 bp

ATGGATCGTCTGCTACCCTCTGCCTCTGTACTCACACTTCTCATCCTCTCTTTCTTCTCAGAAGTGAACTCTGCCTCTTTCAAGCTAGTGAACAAGTGTCGGTACGAAGTATGGCCTGGCGTGCTTTCCGGCGCGAACACGGCTCCACTCTCCCCAACCGGCTTCGCGCTCAAGCCCGGCAAGTCCCGGACCCTATCCGTGCCCAAAGCCTGGTCGGGTCGGATCTGGGCGCGGACCCTCTGCACCGAGTACTCACCCACCAACTTCTCCTGCGTCACAGGCGACTGTGGCTCCGGAAAAATCGAGTGTGCCGGCAGCGGCGCGAAGCCGCCAGCTACTTTAGCCGAGTTCACTCTCAACGGCGCCGACGGCTTGGATTTTTATGACGTCAGCCTGGTGGACGGATACAACCTGCCGATGCTTGTGGTGCCACGTGGAGGTACAAGAGGGGGATGCAGCGCCACGGGGTGTCTTGTGGACTTGAACGGCAAGTGTCCGAGGGCGTTGAGGGTCGCGCGCGAGGGTGGAGTGGGAAGAGTGGCGTGTAGGAGCGCGTGCGAAGCGTTTGGGGATCCGCAGTTTTGTTGTAGTGAGGCGTACGCTACGCCCGACACGTGTCAGCCCTCTGTGTTCTCGCTGTTTTTTAAGCATGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAGACTAGTACTTACACATGCGCCTCTGCGGACTACATTATAATCTTCTGCCCTTTGCCTTATACAAGTCTAAAGGTGCTGGGAATACGAAAAGATGGGGCGGTGCTACCGCTGGTTAACAAGACCATGATGTACTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thaumatin

Protein Analysis

276

Amino Acids

29.41

Weight (kDa)

8.55

Isoelectric Point (pI)

31.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38670 AT4G38670 AT4G38670
fragaria_vesca	FvH4_2g01560 FvH4_2g01560 FvH4_2g01560 FvH4_2g01560
malus_domestica	MD05G1118700.v1.1 MD10G1121800.v1.1
prunus_persica	Prupe.8G163200_v2.0.a1 Prupe.8G163200_v2.0.a1 Prupe.8G163200_v2.0.a1
pyrus_communis	pycom05g11290 pycom10g10500
rosa_chinensis	RchiOBHm_Chr6g0244191
rosa_laevigata	RLG00000015374
rosa_multiflora	Rmu_co8293093.1_g000001 Rmu_sc0000638.1_g000024 Rmu_sc0001455.1_g000003
rosa_roxburghii	Rroxscaffold_7G00215930
rosa_rugosa	Rorug05G0507800 Rorug05G0507800
rosa_samantha	Rh6AG022600 Rh6BG018200 Rh6CG015000 Rh6DG016200
rosa_wichuraiana	Rw6G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	728
AatII	GACGTC	1 cut(s)	390
Acc36I	ACCTGC	1 cut(s)	420
AccB1I	GGYRCC	2 cut(s)	362, 427
AccB7I	CCANNNNNTGG	1 cut(s)	210
AccIII	TCCGGA	1 cut(s)	293
AciI	CCGC	7 cut(s)	232, 318, 329, 575, 716, 788, 797
AclWI	GGATC	4 cut(s)	12, 230, 566, 579
AcvI	CACGTG	2 cut(s)	434, 615
AcyI	GRCGYC	2 cut(s)	363, 387
AdeI	CACNNNGTG	1 cut(s)	468
AfaI	GTAC	7 cut(s)	30, 104, 251, 442, 599, 697, 821
AfiI	CCNNNNNNNGG	2 cut(s)	210, 437
AflIII	ACRYGT	3 cut(s)	612, 614, 675
AgsI	TTSAA	2 cut(s)	82, 484
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	3 cut(s)	115, 209, 393
AluBI	AGCT	3 cut(s)	85, 335, 672
AluI	AGCT	3 cut(s)	85, 335, 672
AlwI	GGATC	4 cut(s)	12, 230, 566, 579
Aor13HI	TCCGGA	1 cut(s)	293
AoxI	GGCC	1 cut(s)	113
ApeKI	GCWGC	2 cut(s)	315, 456
AspS9I	GGNCC	2 cut(s)	189, 234
AsuC2I	CCSGG	2 cut(s)	177, 187
AsuHPI	GGTGA	1 cut(s)	246
AvaII	GGWCC	2 cut(s)	189, 234
BaeGI	GKGCMC	1 cut(s)	204
BamHI	GGATCC	1 cut(s)	571
BanI	GGYRCC	2 cut(s)	362, 427
BarI	GAAGNNNNNNTAC	2 cut(s)	21, 53
BbrPI	CACGTG	2 cut(s)	434, 615
BbvI	GCAGC	2 cut(s)	327, 468
BccI	CCATC	1 cut(s)	776
BceAI	ACGGC	4 cut(s)	156, 376, 385, 502
BciT130I	CCWGG	3 cut(s)	117, 211, 395
BciVI	GTATCC	1 cut(s)	398
BcnI	CCSGG	2 cut(s)	177, 187
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	2 cut(s)	86, 693
BfoI	RGCGCY	2 cut(s)	366, 462
BfuAI	ACCTGC	1 cut(s)	420
BfuI	GTATCC	1 cut(s)	398
BisI	GCNGC	4 cut(s)	316, 319, 329, 457
BlsI	GCNGC	4 cut(s)	317, 320, 330, 458
BmcAI	AGTACT	2 cut(s)	251, 697
Bme1390I	CCNGG	5 cut(s)	117, 177, 187, 211, 395
Bme18I	GGWCC	2 cut(s)	189, 234
BmgT120I	GGNCC	2 cut(s)	189, 234
BmiI	GGNNCC	7 cut(s)	144, 191, 236, 292, 364, 429, 573
BmrFI	CCNGG	5 cut(s)	117, 177, 187, 211, 395
BmsI	GCATC	2 cut(s)	408, 443
BoxI	GACNNNNGTC	1 cut(s)	615
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	2 cut(s)	177, 187
BsaAI	YACGTR	2 cut(s)	434, 615
BsaHI	GRCGYC	2 cut(s)	363, 387
BsaJI	CCNNGG	2 cut(s)	462, 497
BsaWI	WCCGGW	1 cut(s)	293
BsaXI	ACNNNNNCTCC	2 cut(s)	275, 305
Bsc4I	CCNNNNNNNGG	2 cut(s)	210, 437
Bse118I	RCCGGY	2 cut(s)	158, 311
BseAI	TCCGGA	1 cut(s)	293
BseBI	CCWGG	3 cut(s)	117, 211, 395
BseDI	CCNNGG	2 cut(s)	462, 497
BseGI	GGATG	2 cut(s)	42, 458
BseLI	CCNNNNNNNGG	2 cut(s)	210, 437
BseMII	CTCAG	1 cut(s)	72
BsePI	GCGCGC	1 cut(s)	515
BseSI	GKGCMC	1 cut(s)	204
BseXI	GCAGC	2 cut(s)	327, 468
BseYI	CCCAGC	1 cut(s)	766
BsgI	GTGCAG	1 cut(s)	226
BshFI	GGCC	1 cut(s)	115
BshNI	GGYRCC	2 cut(s)	362, 427
BsiSI	CCGG	6 cut(s)	129, 159, 177, 187, 294, 312
BsiWI	CGTACG	1 cut(s)	597
BslFI	GGGAC	1 cut(s)	169
BslI	CCNNNNNNNGG	2 cut(s)	210, 437
BsmFI	GGGAC	1 cut(s)	169
BsnI	GGCC	1 cut(s)	115
Bsp1286I	GDGCHC	1 cut(s)	204
Bsp13I	TCCGGA	1 cut(s)	293
Bsp143I	GATC	3 cut(s)	4, 222, 571
BspACI	CCGC	7 cut(s)	232, 318, 329, 575, 716, 788, 797
BspANI	GGCC	1 cut(s)	115
BspCNI	CTCAG	1 cut(s)	71
BspEI	TCCGGA	1 cut(s)	293
BspLI	GGNNCC	7 cut(s)	144, 191, 236, 292, 364, 429, 573
BspMI	ACCTGC	1 cut(s)	420
BspPI	GGATC	4 cut(s)	12, 230, 566, 579
BspT107I	GGYRCC	2 cut(s)	362, 427
BsrFI	RCCGGY	2 cut(s)	158, 311
BssAI	RCCGGY	2 cut(s)	158, 311
BssECI	CCNNGG	2 cut(s)	462, 497
BssHII	GCGCGC	1 cut(s)	515
BssMI	GATC	3 cut(s)	4, 222, 571
BssNI	GRCGYC	2 cut(s)	363, 387
Bst2UI	CCWGG	3 cut(s)	117, 211, 395
Bst4CI	ACNGT	1 cut(s)	287
Bst6I	CTCTTC	1 cut(s)	529
BstACI	GRCGYC	2 cut(s)	363, 387
BstBAI	YACGTR	2 cut(s)	434, 615
BstC8I	GCNNGC	7 cut(s)	122, 313, 333, 517, 556, 651, 655
BstDEI	CTNAG	1 cut(s)	58
BstDSI	CCRYGG	1 cut(s)	462
BstF5I	GGATG	2 cut(s)	42, 458
BstH2I	RGCGCY	2 cut(s)	366, 462
BstKTI	GATC	3 cut(s)	7, 225, 574
BstMBI	GATC	3 cut(s)	4, 222, 571
BstMWI	GCNNNNNNNGC	9 cut(s)	121, 140, 279, 288, 341, 369, 427, 560, 669
BstNI	CCWGG	3 cut(s)	117, 211, 395
BstNSI	RCATGY	2 cut(s)	653, 708
BstPAI	GACNNNNGTC	1 cut(s)	615
BstSCI	CCNGG	5 cut(s)	115, 175, 185, 209, 393
BstSLI	GKGCMC	1 cut(s)	204
BstV1I	GCAGC	2 cut(s)	327, 468
BstX2I	RGATCY	2 cut(s)	222, 571
BstYI	RGATCY	2 cut(s)	222, 571
BsuI	GTATCC	1 cut(s)	398
BsuRI	GGCC	1 cut(s)	115
BtgI	CCRYGG	1 cut(s)	462
BtsCI	GGATG	2 cut(s)	42, 458
BveI	ACCTGC	1 cut(s)	420
Cac8I	GCNNGC	7 cut(s)	122, 313, 333, 517, 556, 651, 655
Cfr10I	RCCGGY	2 cut(s)	158, 311
Cfr13I	GGNCC	2 cut(s)	189, 234
CseI	GACGC	1 cut(s)	262
Csp6I	GTAC	7 cut(s)	29, 103, 250, 441, 598, 696, 820
CviAII	CATG	3 cut(s)	650, 705, 814
CviQI	GTAC	7 cut(s)	29, 103, 250, 441, 598, 696, 820
DdeI	CTNAG	1 cut(s)	58
DinI	GGCGCC	1 cut(s)	364
DpnI	GATC	3 cut(s)	6, 224, 573
DpnII	GATC	3 cut(s)	4, 222, 571
DraIII	CACNNNGTG	1 cut(s)	468
Eam1104I	CTCTTC	1 cut(s)	529
EarI	CTCTTC	1 cut(s)	529
Eco47I	GGWCC	2 cut(s)	189, 234
Eco72I	CACGTG	2 cut(s)	434, 615
EcoRII	CCWGG	3 cut(s)	115, 209, 393
EgeI	GGCGCC	1 cut(s)	364
EheI	GGCGCC	1 cut(s)	364
FaeI	CATG	3 cut(s)	653, 708, 817
FaiI	YATR	9 cut(s)	112, 384, 651, 669, 681, 706, 728, 750, 815
FaqI	GGGAC	1 cut(s)	169
FatI	CATG	3 cut(s)	649, 704, 813
Fnu4HI	GCNGC	4 cut(s)	316, 319, 329, 457
FokI	GGATG	2 cut(s)	29, 465
Fsp4HI	GCNGC	4 cut(s)	316, 319, 329, 457
FspBI	CTAG	2 cut(s)	86, 693
GluI	GCNGC	4 cut(s)	316, 319, 329, 457
GsaI	CCCAGC	1 cut(s)	770
HaeII	RGCGCY	2 cut(s)	366, 462
HaeIII	GGCC	1 cut(s)	115
HapII	CCGG	6 cut(s)	129, 159, 177, 187, 294, 312
HgaI	GACGC	1 cut(s)	262
Hin1I	GRCGYC	2 cut(s)	363, 387
Hin1II	CATG	3 cut(s)	653, 708, 817
HincII	GTYRAC	1 cut(s)	805
HindII	GTYRAC	1 cut(s)	805
HpaI	GTTAAC	1 cut(s)	805
HpaII	CCGG	6 cut(s)	129, 159, 177, 187, 294, 312
HphI	GGTGA	1 cut(s)	246
Hpy166II	GTNNAC	6 cut(s)	67, 91, 351, 400, 478, 805
Hpy188I	TCNGA	3 cut(s)	61, 222, 498
Hpy188III	TCNNGA	1 cut(s)	294
Hpy8I	GTNNAC	6 cut(s)	67, 91, 351, 400, 478, 805
Hpy99I	CGWCG	1 cut(s)	371
HpyCH4III	ACNGT	1 cut(s)	287
HpyCH4IV	ACGT	3 cut(s)	387, 433, 614
HpyCH4V	TGCA	2 cut(s)	243, 456
HpyF10VI	GCNNNNNNNGC	9 cut(s)	121, 140, 279, 288, 341, 369, 427, 560, 669
HpyF3I	CTNAG	1 cut(s)	58
HpySE526I	ACGT	3 cut(s)	387, 433, 614
Hsp92I	GRCGYC	2 cut(s)	363, 387
Hsp92II	CATG	3 cut(s)	653, 708, 817
KasI	GGCGCC	1 cut(s)	362
Kpn2I	TCCGGA	1 cut(s)	293
KroI	GCCGGC	1 cut(s)	311
KroNI	GCCGGC	1 cut(s)	313
KspAI	GTTAAC	1 cut(s)	805
Kzo9I	GATC	3 cut(s)	4, 222, 571
LmnI	GCTCC	3 cut(s)	148, 296, 549
Lsp1109I	GCAGC	2 cut(s)	327, 468
LweI	GCATC	2 cut(s)	408, 443
MaeI	CTAG	2 cut(s)	86, 693
MaeII	ACGT	3 cut(s)	387, 433, 614
MaeIII	GTNAC	1 cut(s)	274
MalI	GATC	3 cut(s)	6, 224, 573
MauBI	CGCGCGCG	1 cut(s)	515
MboI	GATC	3 cut(s)	4, 222, 571
MboII	GAAGA	3 cut(s)	46, 546, 724
MflI	RGATCY	2 cut(s)	222, 571
MhlI	GDGCHC	1 cut(s)	204
MluI	ACGCGT	1 cut(s)	675
Mly113I	GGCGCC	1 cut(s)	363
MmeI	TCCRAC	1 cut(s)	200
MroI	TCCGGA	1 cut(s)	293
MroNI	GCCGGC	1 cut(s)	311
MseI	TTAA	3 cut(s)	645, 804, 826
MspA1I	CMGCKG	2 cut(s)	318, 799
MspI	CCGG	6 cut(s)	129, 159, 177, 187, 294, 312
MspR9I	CCNGG	5 cut(s)	117, 177, 187, 211, 395
MvaI	CCWGG	3 cut(s)	117, 211, 395
MwoI	GCNNNNNNNGC	9 cut(s)	121, 140, 279, 288, 341, 369, 427, 560, 669
NaeI	GCCGGC	1 cut(s)	313
NarI	GGCGCC	1 cut(s)	363
NciI	CCSGG	2 cut(s)	177, 187
NdeII	GATC	3 cut(s)	4, 222, 571
NgoMIV	GCCGGC	1 cut(s)	311
NlaIII	CATG	3 cut(s)	653, 708, 817
NlaIV	GGNNCC	7 cut(s)	144, 191, 236, 292, 364, 429, 573
NmeAIII	GCCGAG	1 cut(s)	370
NmuCI	GTSAC	1 cut(s)	274
NspI	RCATGY	2 cut(s)	653, 708
PaeI	GCATGC	1 cut(s)	653
PauI	GCGCGC	1 cut(s)	515
PcsI	WCGNNNNNNNCGW	2 cut(s)	606, 611
PdiI	GCCGGC	1 cut(s)	313
Pfl23II	CGTACG	1 cut(s)	597
PflMI	CCANNNNNTGG	1 cut(s)	210
PfoI	TCCNGGA	1 cut(s)	185
PkrI	GCNGC	4 cut(s)	317, 320, 330, 458
PluTI	GGCGCC	1 cut(s)	366
PmaCI	CACGTG	2 cut(s)	434, 615
PmlI	CACGTG	2 cut(s)	434, 615
Ppu21I	YACGTR	2 cut(s)	434, 615
PshAI	GACNNNNGTC	1 cut(s)	615
PsiI	TTATAA	1 cut(s)	728
Psp6I	CCWGG	3 cut(s)	115, 209, 393
PspCI	CACGTG	2 cut(s)	434, 615
PspFI	CCCAGC	1 cut(s)	766
PspGI	CCWGG	3 cut(s)	115, 209, 393
PspLI	CGTACG	1 cut(s)	597
PspN4I	GGNNCC	7 cut(s)	144, 191, 236, 292, 364, 429, 573
PspPI	GGNCC	2 cut(s)	189, 234
PsuI	RGATCY	2 cut(s)	222, 571
PteI	GCGCGC	1 cut(s)	515
RsaI	GTAC	7 cut(s)	30, 104, 251, 442, 599, 697, 821
RsaNI	GTAC	7 cut(s)	29, 103, 250, 441, 598, 696, 820
SaqAI	TTAA	3 cut(s)	645, 804, 826
SatI	GCNGC	4 cut(s)	316, 319, 329, 457
Sau3AI	GATC	3 cut(s)	4, 222, 571
Sau96I	GGNCC	2 cut(s)	189, 234
ScaI	AGTACT	2 cut(s)	251, 697
ScrFI	CCNGG	5 cut(s)	117, 177, 187, 211, 395
SduI	GDGCHC	1 cut(s)	204
SetI	ASST	9 cut(s)	87, 337, 390, 414, 436, 442, 617, 674, 765
SfaNI	GCATC	2 cut(s)	408, 443
SfoI	GGCGCC	1 cut(s)	364
SinI	GGWCC	2 cut(s)	189, 234
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
SpeI	ACTAGT	1 cut(s)	692
SphI	GCATGC	1 cut(s)	653
SsiI	CCGC	7 cut(s)	232, 318, 329, 575, 716, 788, 797
SspDI	GGCGCC	1 cut(s)	362
SspMI	CTAG	2 cut(s)	86, 693
StyD4I	CCNGG	5 cut(s)	115, 175, 185, 209, 393
TaaI	ACNGT	1 cut(s)	287
TaiI	ACGT	3 cut(s)	390, 436, 617
TaqI	TCGA	1 cut(s)	303
TatI	WGTACW	4 cut(s)	28, 249, 695, 819
TauI	GCSGC	2 cut(s)	321, 331
Tru1I	TTAA	3 cut(s)	645, 804, 826
Tru9I	TTAA	3 cut(s)	645, 804, 826
TseFI	GTSAC	1 cut(s)	274
TseI	GCWGC	2 cut(s)	315, 456
Tsp45I	GTSAC	1 cut(s)	274
TspGWI	ACGGA	2 cut(s)	187, 417
Van91I	CCANNNNNTGG	1 cut(s)	210
VpaK11BI	GGWCC	2 cut(s)	189, 234
XceI	RCATGY	2 cut(s)	653, 708
XspI	CTAG	2 cut(s)	86, 693
ZraI	GACGTC	1 cut(s)	388
ZrmI	AGTACT	2 cut(s)	251, 697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.