Trafficking protein particle complex subunit 2-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20930 |
| fragaria_vesca | FvH4_2g15500 FvH4_2g15500 |
| malus_domestica | MD05G1123300.v1.1 MD10G1126300.v1.1 |
| prunus_persica | Prupe.8G167200_v2.0.a1 |
| pyrus_communis | pycom10g10850 |
| rosa_chinensis | RchiOBHm_Chr6g0278501 |
| rosa_laevigata | RLG00000013223 |
| rosa_multiflora | Rmu_sc0000258.1_g000008 Rmu_sc0002777.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00189840 Rroxscaffold_7G00190330 |
| rosa_rugosa | Rorug06G0117500 |
| rosa_samantha | Rh4AG039800 Rh4BG034500 Rh6AG226600 Rh6BG230800 Rh6CG233900 Rh6DG225200 |
| rosa_wichuraiana | Rw0G003070 Rw6G019780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 117 |
| AccI | GTMKAC | 1 cut(s) | 120 |
| AcoI | YGGCCR | 1 cut(s) | 25 |
| AcsI | RAATTY | 1 cut(s) | 289 |
| AcyI | GRCGYC | 3 cut(s) | 66, 75, 114 |
| AdeI | CACNNNGTG | 1 cut(s) | 97 |
| AflII | CTTAAG | 1 cut(s) | 415 |
| AgsI | TTSAA | 4 cut(s) | 53, 163, 333, 423 |
| AjnI | CCWGG | 1 cut(s) | 349 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 230, 262 |
| AluBI | AGCT | 2 cut(s) | 57, 85 |
| AluI | AGCT | 2 cut(s) | 57, 85 |
| Alw21I | GWGCWC | 2 cut(s) | 102, 395 |
| Alw26I | GTCTC | 1 cut(s) | 161 |
| Alw44I | GTGCAC | 1 cut(s) | 98 |
| AoxI | GGCC | 1 cut(s) | 25 |
| ApaLI | GTGCAC | 1 cut(s) | 98 |
| ApeKI | GCWGC | 1 cut(s) | 311 |
| ApoI | RAATTY | 1 cut(s) | 289 |
| AspS9I | GGNCC | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 3 cut(s) | 52, 247, 400 |
| AvaII | GGWCC | 1 cut(s) | 152 |
| BaeGI | GKGCMC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 2 cut(s) | 102, 395 |
| BbvI | GCAGC | 1 cut(s) | 298 |
| BccI | CCATC | 1 cut(s) | 404 |
| BceAI | ACGGC | 1 cut(s) | 2 |
| BciT130I | CCWGG | 1 cut(s) | 351 |
| BcoDI | GTCTC | 1 cut(s) | 161 |
| BfrI | CTTAAG | 1 cut(s) | 415 |
| BisI | GCNGC | 1 cut(s) | 312 |
| BlsI | GCNGC | 1 cut(s) | 313 |
| Bme1390I | CCNGG | 1 cut(s) | 351 |
| Bme18I | GGWCC | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 152 |
| BmrFI | CCNGG | 1 cut(s) | 351 |
| BmsI | GCATC | 2 cut(s) | 265, 313 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| BsaHI | GRCGYC | 3 cut(s) | 66, 75, 114 |
| Bse1I | ACTGG | 1 cut(s) | 430 |
| BseBI | CCWGG | 1 cut(s) | 351 |
| BseGI | GGATG | 2 cut(s) | 280, 328 |
| BseNI | ACTGG | 1 cut(s) | 430 |
| BseSI | GKGCMC | 1 cut(s) | 102 |
| BseXI | GCAGC | 1 cut(s) | 298 |
| BshFI | GGCC | 1 cut(s) | 27 |
| BsiHKAI | GWGCWC | 2 cut(s) | 102, 395 |
| BsmAI | GTCTC | 1 cut(s) | 161 |
| BsnI | GGCC | 1 cut(s) | 27 |
| Bsp1286I | GDGCHC | 2 cut(s) | 102, 395 |
| Bsp143I | GATC | 1 cut(s) | 259 |
| BspANI | GGCC | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BspTI | CTTAAG | 1 cut(s) | 415 |
| BsrI | ACTGG | 1 cut(s) | 430 |
| BssMI | GATC | 1 cut(s) | 259 |
| BssNI | GRCGYC | 3 cut(s) | 66, 75, 114 |
| Bst2UI | CCWGG | 1 cut(s) | 351 |
| BstACI | GRCGYC | 3 cut(s) | 66, 75, 114 |
| BstAFI | CTTAAG | 1 cut(s) | 415 |
| BstF5I | GGATG | 2 cut(s) | 280, 328 |
| BstKTI | GATC | 1 cut(s) | 262 |
| BstMAI | GTCTC | 1 cut(s) | 161 |
| BstMBI | GATC | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 74 |
| BstNI | CCWGG | 1 cut(s) | 351 |
| BstSCI | CCNGG | 1 cut(s) | 349 |
| BstSLI | GKGCMC | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 298 |
| BsuRI | GGCC | 1 cut(s) | 27 |
| BtsCI | GGATG | 2 cut(s) | 280, 328 |
| BtsI | GCAGTG | 1 cut(s) | 100 |
| BtsIMutI | CAGTG | 1 cut(s) | 100 |
| CciI | TCATGA | 1 cut(s) | 343 |
| Cfr13I | GGNCC | 1 cut(s) | 152 |
| CseI | GACGC | 2 cut(s) | 74, 83 |
| CviAII | CATG | 2 cut(s) | 308, 344 |
| CviJI | RGCY | 7 cut(s) | 27, 57, 85, 149, 216, 349, 414 |
| CviKI_1 | RGCY | 7 cut(s) | 27, 57, 85, 149, 216, 349, 414 |
| DpnI | GATC | 1 cut(s) | 261 |
| DpnII | GATC | 1 cut(s) | 259 |
| DraIII | CACNNNGTG | 1 cut(s) | 97 |
| EaeI | YGGCCR | 1 cut(s) | 25 |
| Eco47I | GGWCC | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 349 |
| FaeI | CATG | 2 cut(s) | 311, 347 |
| FaiI | YATR | 4 cut(s) | 213, 309, 318, 345 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 230, 262 |
| FatI | CATG | 2 cut(s) | 307, 343 |
| FblI | GTMKAC | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 1 cut(s) | 312 |
| FokI | GGATG | 2 cut(s) | 287, 335 |
| Fsp4HI | GCNGC | 1 cut(s) | 312 |
| GluI | GCNGC | 1 cut(s) | 312 |
| HaeIII | GGCC | 1 cut(s) | 27 |
| HgaI | GACGC | 2 cut(s) | 74, 83 |
| Hin1I | GRCGYC | 3 cut(s) | 66, 75, 114 |
| Hin1II | CATG | 2 cut(s) | 311, 347 |
| HincII | GTYRAC | 1 cut(s) | 121 |
| HindII | GTYRAC | 1 cut(s) | 121 |
| HindIII | AAGCTT | 1 cut(s) | 55 |
| HphI | GGTGA | 3 cut(s) | 52, 247, 400 |
| Hpy166II | GTNNAC | 3 cut(s) | 100, 121, 133 |
| Hpy188III | TCNNGA | 3 cut(s) | 263, 298, 344 |
| Hpy8I | GTNNAC | 3 cut(s) | 100, 121, 133 |
| Hpy99I | CGWCG | 8 cut(s) | 17, 23, 26, 68, 116, 119, 122, 125 |
| HpyCH4IV | ACGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 4 cut(s) | 100, 278, 326, 380 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 74 |
| HpySE526I | ACGT | 1 cut(s) | 114 |
| Hsp92I | GRCGYC | 3 cut(s) | 66, 75, 114 |
| Hsp92II | CATG | 2 cut(s) | 311, 347 |
| Kzo9I | GATC | 1 cut(s) | 259 |
| LmnI | GCTCC | 2 cut(s) | 90, 110 |
| LpnPI | CCDG | 6 cut(s) | 44, 135, 283, 336, 363, 411 |
| Lsp1109I | GCAGC | 1 cut(s) | 298 |
| LweI | GCATC | 2 cut(s) | 265, 313 |
| MaeII | ACGT | 1 cut(s) | 114 |
| MaeIII | GTNAC | 1 cut(s) | 250 |
| MalI | GATC | 1 cut(s) | 261 |
| MboI | GATC | 1 cut(s) | 259 |
| MhlI | GDGCHC | 2 cut(s) | 102, 395 |
| MluCI | AATT | 3 cut(s) | 199, 289, 327 |
| MmeI | TCCRAC | 1 cut(s) | 215 |
| MnlI | CCTC | 3 cut(s) | 89, 119, 376 |
| MseI | TTAA | 2 cut(s) | 402, 416 |
| MspCI | CTTAAG | 1 cut(s) | 415 |
| MspR9I | CCNGG | 1 cut(s) | 351 |
| MvaI | CCWGG | 1 cut(s) | 351 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 74 |
| NdeII | GATC | 1 cut(s) | 259 |
| NlaIII | CATG | 2 cut(s) | 311, 347 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 117, 120 |
| PflFI | GACNNNGTC | 1 cut(s) | 116 |
| PkrI | GCNGC | 1 cut(s) | 313 |
| Psp6I | CCWGG | 1 cut(s) | 349 |
| PspGI | CCWGG | 1 cut(s) | 349 |
| PspPI | GGNCC | 1 cut(s) | 152 |
| PsyI | GACNNNGTC | 1 cut(s) | 116 |
| SalI | GTCGAC | 1 cut(s) | 119 |
| SaqAI | TTAA | 2 cut(s) | 402, 416 |
| SatI | GCNGC | 1 cut(s) | 312 |
| Sau3AI | GATC | 1 cut(s) | 259 |
| Sau96I | GGNCC | 1 cut(s) | 152 |
| ScrFI | CCNGG | 1 cut(s) | 351 |
| SduI | GDGCHC | 2 cut(s) | 102, 395 |
| SetI | ASST | 7 cut(s) | 59, 87, 117, 161, 237, 355, 368 |
| SfaNI | GCATC | 2 cut(s) | 265, 313 |
| SgrDI | CGTCGACG | 1 cut(s) | 119 |
| SinI | GGWCC | 1 cut(s) | 152 |
| SmlI | CTYRAG | 2 cut(s) | 80, 415 |
| SmoI | CTYRAG | 2 cut(s) | 80, 415 |
| Sse9I | AATT | 3 cut(s) | 199, 289, 327 |
| StyD4I | CCNGG | 1 cut(s) | 349 |
| TaiI | ACGT | 1 cut(s) | 117 |
| TaqI | TCGA | 2 cut(s) | 111, 120 |
| TaqII | GACCGA | 1 cut(s) | 169 |
| TasI | AATT | 3 cut(s) | 199, 289, 327 |
| Tru1I | TTAA | 2 cut(s) | 402, 416 |
| Tru9I | TTAA | 2 cut(s) | 402, 416 |
| TscAI | CASTG | 1 cut(s) | 107 |
| TseI | GCWGC | 1 cut(s) | 311 |
| TspDTI | ATGAA | 2 cut(s) | 296, 332 |
| TspRI | CASTG | 1 cut(s) | 107 |
| Tth111I | GACNNNGTC | 1 cut(s) | 116 |
| Vha464I | CTTAAG | 1 cut(s) | 415 |
| VneI | GTGCAC | 1 cut(s) | 98 |
| VpaK11BI | GGWCC | 1 cut(s) | 152 |
| XapI | RAATTY | 1 cut(s) | 289 |
| XmiI | GTMKAC | 1 cut(s) | 120 |
| ZraI | GACGTC | 1 cut(s) | 115 |