Niemann-Pick C1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38350 AT4G38350 |
| fragaria_vesca | FvH4_2g16650 FvH4_2g16650 FvH4_2g16650 FvH4_2g16650 |
| malus_domestica | MD10G1139800.v1.1 |
| prunus_persica | Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 Prupe.8G178600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0280781 |
| rosa_laevigata | RLG00000013029 |
| rosa_multiflora | Rmu_sc0001197.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00187670 |
| rosa_rugosa | Rorug06G0134400 |
| rosa_samantha | Rh6AG247100 Rh6BG249400 Rh6CG250500 Rh6DG241900 |
| rosa_wichuraiana | Rw6G021400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2075, 3371 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 371, 625 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3618 |
| AccI | GTMKAC | 1 cut(s) | 2320 |
| AccII | CGCG | 1 cut(s) | 23 |
| AccIII | TCCGGA | 2 cut(s) | 865, 2186 |
| AciI | CCGC | 4 cut(s) | 92, 499, 1445, 2680 |
| AclI | AACGTT | 1 cut(s) | 2411 |
| AcoI | YGGCCR | 4 cut(s) | 1406, 2295, 3316, 3681 |
| AcsI | RAATTY | 5 cut(s) | 57, 752, 1014, 1647, 3465 |
| AcuI | CTGAAG | 6 cut(s) | 342, 467, 1256, 2412, 2825, 3832 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1274, 1532, 2293, 3164, 3618, 3946 |
| AflIII | ACRYGT | 2 cut(s) | 1787, 2313 |
| AhlI | ACTAGT | 1 cut(s) | 2633 |
| AjnI | CCWGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 95, 127 |
| AleI | CACNNNNGTG | 1 cut(s) | 1334 |
| Alw21I | GWGCWC | 3 cut(s) | 888, 1341, 3626 |
| Alw26I | GTCTC | 6 cut(s) | 1321, 1394, 2001, 2617, 3255, 3715 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 604, 3532, 3713 |
| Aor13HI | TCCGGA | 2 cut(s) | 865, 2186 |
| AoxI | GGCC | 7 cut(s) | 1222, 1378, 1406, 2295, 2398, 3316, 3681 |
| ApaI | GGGCCC | 1 cut(s) | 1226 |
| ApoI | RAATTY | 5 cut(s) | 57, 752, 1014, 1647, 3465 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 430, 462 |
| AseI | ATTAAT | 2 cut(s) | 39, 2261 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2277 |
| AspLEI | GCGC | 2 cut(s) | 1799, 2386 |
| AspS9I | GGNCC | 8 cut(s) | 1222, 1223, 1711, 2170, 2399, 2882, 3167, 3664 |
| AsuNHI | GCTAGC | 1 cut(s) | 4052 |
| AvaII | GGWCC | 5 cut(s) | 1711, 2170, 2882, 3167, 3664 |
| AxyI | CCTNAGG | 1 cut(s) | 3081 |
| BaeGI | GKGCMC | 3 cut(s) | 505, 1226, 1521 |
| BalI | TGGCCA | 2 cut(s) | 3318, 3683 |
| BamHI | GGATCC | 2 cut(s) | 1254, 2649 |
| BanII | GRGCYC | 5 cut(s) | 283, 888, 1226, 3626, 3975 |
| BbsI | GAAGAC | 3 cut(s) | 272, 2473, 3838 |
| Bbv12I | GWGCWC | 3 cut(s) | 888, 1341, 3626 |
| BbvCI | CCTCAGC | 1 cut(s) | 2574 |
| BceAI | ACGGC | 4 cut(s) | 1421, 2282, 2357, 2460 |
| BciT130I | CCWGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| BciVI | GTATCC | 1 cut(s) | 2840 |
| BclI | TGATCA | 2 cut(s) | 3136, 3555 |
| BcoDI | GTCTC | 6 cut(s) | 1321, 1394, 2001, 2617, 3255, 3715 |
| BcuI | ACTAGT | 1 cut(s) | 2633 |
| BfaI | CTAG | 9 cut(s) | 255, 876, 1137, 1382, 2418, 2634, 2787, 3872, 4053 |
| BfmI | CTRYAG | 4 cut(s) | 1779, 2064, 2917, 3567 |
| BfuI | GTATCC | 1 cut(s) | 2840 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1666 |
| BlpI | GCTNAGC | 2 cut(s) | 3033, 3625 |
| BmcAI | AGTACT | 1 cut(s) | 2062 |
| Bme1390I | CCNGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| Bme18I | GGWCC | 5 cut(s) | 1711, 2170, 2882, 3167, 3664 |
| BmgT120I | GGNCC | 8 cut(s) | 1222, 1223, 1711, 2170, 2399, 2882, 3167, 3664 |
| BmiI | GGNNCC | 7 cut(s) | 1146, 1224, 1256, 1713, 1809, 2651, 3278 |
| BmrFI | CCNGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| BmrI | ACTGGG | 2 cut(s) | 935, 1883 |
| BmsI | GCATC | 5 cut(s) | 646, 2122, 2878, 3011, 3386 |
| BmtI | GCTAGC | 1 cut(s) | 4056 |
| BmuI | ACTGGG | 2 cut(s) | 935, 1883 |
| BpiI | GAAGAC | 3 cut(s) | 272, 2473, 3838 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 989, 1021 |
| BpmI | CTGGAG | 2 cut(s) | 1303, 2372 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2574 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3033, 3625 |
| BpuEI | CTTGAG | 5 cut(s) | 571, 942, 1224, 3445, 3883 |
| Bsa29I | ATCGAT | 1 cut(s) | 171 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1470, 3488 |
| BsaI | GGTCTC | 1 cut(s) | 1321 |
| BsaWI | WCCGGW | 3 cut(s) | 865, 1107, 2186 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 470, 500, 1728, 1758, 3828, 3858, 3870, 3900 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1274, 1532, 2293, 3164, 3618, 3946 |
| Bse118I | RCCGGY | 1 cut(s) | 3985 |
| Bse21I | CCTNAGG | 1 cut(s) | 3081 |
| Bse3DI | GCAATG | 7 cut(s) | 342, 494, 2386, 2772, 3027, 3561, 3657 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1470, 3488 |
| BseAI | TCCGGA | 2 cut(s) | 865, 2186 |
| BseBI | CCWGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| BseCI | ATCGAT | 1 cut(s) | 171 |
| BseGI | GGATG | 5 cut(s) | 7, 661, 721, 1207, 2402 |
| BseJI | GATNNNNATC | 2 cut(s) | 1470, 3488 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1274, 1532, 2293, 3164, 3618, 3946 |
| BseMI | GCAATG | 7 cut(s) | 342, 494, 2386, 2772, 3027, 3561, 3657 |
| BseRI | GAGGAG | 4 cut(s) | 972, 1138, 1257, 1752 |
| BseSI | GKGCMC | 3 cut(s) | 505, 1226, 1521 |
| BseYI | CCCAGC | 1 cut(s) | 1311 |
| BsgI | GTGCAG | 1 cut(s) | 3429 |
| Bsh1236I | CGCG | 1 cut(s) | 23 |
| Bsh1285I | CGRYCG | 2 cut(s) | 171, 1515 |
| BshFI | GGCC | 7 cut(s) | 1224, 1380, 1408, 2297, 2400, 3318, 3683 |
| BshVI | ATCGAT | 1 cut(s) | 171 |
| BsiEI | CGRYCG | 2 cut(s) | 171, 1515 |
| BsiHKAI | GWGCWC | 3 cut(s) | 888, 1341, 3626 |
| BsiSI | CCGG | 4 cut(s) | 866, 1108, 2187, 3986 |
| BslFI | GGGAC | 1 cut(s) | 742 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1274, 1532, 2293, 3164, 3618, 3946 |
| BsmAI | GTCTC | 6 cut(s) | 1321, 1394, 2001, 2617, 3255, 3715 |
| BsmFI | GGGAC | 1 cut(s) | 742 |
| BsmI | GAATGC | 3 cut(s) | 1871, 1930, 2706 |
| BsnI | GGCC | 7 cut(s) | 1224, 1380, 1408, 2297, 2400, 3318, 3683 |
| Bso31I | GGTCTC | 1 cut(s) | 1321 |
| Bsp120I | GGGCCC | 1 cut(s) | 1222 |
| Bsp1286I | GDGCHC | 8 cut(s) | 283, 505, 888, 1226, 1341, 1521, 3626, 3975 |
| Bsp13I | TCCGGA | 2 cut(s) | 865, 2186 |
| Bsp1407I | TGTACA | 3 cut(s) | 699, 1744, 3200 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3033, 3625 |
| Bsp19I | CCATGG | 3 cut(s) | 3272, 3319, 3790 |
| BspACI | CCGC | 4 cut(s) | 92, 499, 1445, 2680 |
| BspANI | GGCC | 7 cut(s) | 1224, 1380, 1408, 2297, 2400, 3318, 3683 |
| BspDI | ATCGAT | 1 cut(s) | 171 |
| BspEI | TCCGGA | 2 cut(s) | 865, 2186 |
| BspFNI | CGCG | 1 cut(s) | 23 |
| BspHI | TCATGA | 1 cut(s) | 888 |
| BspLI | GGNNCC | 7 cut(s) | 1146, 1224, 1256, 1713, 1809, 2651, 3278 |
| BspMAI | CTGCAG | 2 cut(s) | 1783, 2068 |
| BspOI | GCTAGC | 1 cut(s) | 4056 |
| BspTNI | GGTCTC | 1 cut(s) | 1321 |
| BsrDI | GCAATG | 7 cut(s) | 342, 494, 2386, 2772, 3027, 3561, 3657 |
| BsrFI | RCCGGY | 1 cut(s) | 3985 |
| BsrGI | TGTACA | 3 cut(s) | 699, 1744, 3200 |
| BssAI | RCCGGY | 1 cut(s) | 3985 |
| BssNAI | GTATAC | 1 cut(s) | 2321 |
| BssT1I | CCWWGG | 8 cut(s) | 1830, 2124, 2215, 2763, 3272, 3319, 3790, 3889 |
| Bst1107I | GTATAC | 1 cut(s) | 2321 |
| Bst2UI | CCWGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| Bst4CI | ACNGT | 5 cut(s) | 332, 652, 862, 1516, 3338 |
| Bst6I | CTCTTC | 4 cut(s) | 1275, 1443, 2037, 2620 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2501, 2774 |
| BstAUI | TGTACA | 3 cut(s) | 699, 1744, 3200 |
| BstDSI | CCRYGG | 3 cut(s) | 3272, 3319, 3790 |
| BstF5I | GGATG | 5 cut(s) | 7, 661, 721, 1207, 2402 |
| BstFNI | CGCG | 1 cut(s) | 23 |
| BstHHI | GCGC | 2 cut(s) | 1799, 2386 |
| BstMAI | GTCTC | 6 cut(s) | 1321, 1394, 2001, 2617, 3255, 3715 |
| BstMCI | CGRYCG | 2 cut(s) | 171, 1515 |
| BstNI | CCWGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| BstNSI | RCATGY | 8 cut(s) | 549, 1751, 1791, 2317, 2333, 2702, 3210, 3776 |
| BstSCI | CCNGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| BstSFI | CTRYAG | 4 cut(s) | 1779, 2064, 2917, 3567 |
| BstSLI | GKGCMC | 3 cut(s) | 505, 1226, 1521 |
| BstUI | CGCG | 1 cut(s) | 23 |
| BstV2I | GAAGAC | 3 cut(s) | 272, 2473, 3838 |
| BstX2I | RGATCY | 5 cut(s) | 1234, 1254, 2219, 2649, 3343 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2413 |
| BstYI | RGATCY | 5 cut(s) | 1234, 1254, 2219, 2649, 3343 |
| BstZ17I | GTATAC | 1 cut(s) | 2321 |
| Bsu15I | ATCGAT | 1 cut(s) | 171 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3081 |
| BsuI | GTATCC | 1 cut(s) | 2840 |
| BsuRI | GGCC | 7 cut(s) | 1224, 1380, 1408, 2297, 2400, 3318, 3683 |
| BsuTUI | ATCGAT | 1 cut(s) | 171 |
| BtgI | CCRYGG | 3 cut(s) | 3272, 3319, 3790 |
| BtsCI | GGATG | 5 cut(s) | 7, 661, 721, 1207, 2402 |
| BtsI | GCAGTG | 3 cut(s) | 1824, 3287, 3434 |
| BtsIMutI | CAGTG | 8 cut(s) | 923, 1824, 2242, 2348, 3287, 3343, 3434, 3856 |
| CaiI | CAGNNNCTG | 3 cut(s) | 604, 3532, 3713 |
| CciI | TCATGA | 1 cut(s) | 888 |
| CfoI | GCGC | 2 cut(s) | 1799, 2386 |
| Cfr10I | RCCGGY | 1 cut(s) | 3985 |
| Cfr13I | GGNCC | 8 cut(s) | 1222, 1223, 1711, 2170, 2399, 2882, 3167, 3664 |
| ClaI | ATCGAT | 1 cut(s) | 171 |
| CsiI | ACCWGGT | 1 cut(s) | 2797 |
| DraI | TTTAAA | 4 cut(s) | 853, 2985, 3111, 3480 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 371, 625 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 371, 625 |
| EaeI | YGGCCR | 4 cut(s) | 1406, 2295, 3316, 3681 |
| Eam1104I | CTCTTC | 4 cut(s) | 1275, 1443, 2037, 2620 |
| EarI | CTCTTC | 4 cut(s) | 1275, 1443, 2037, 2620 |
| Ecl136II | GAGCTC | 2 cut(s) | 886, 3624 |
| Eco130I | CCWWGG | 8 cut(s) | 1830, 2124, 2215, 2763, 3272, 3319, 3790, 3889 |
| Eco147I | AGGCCT | 1 cut(s) | 1380 |
| Eco24I | GRGCYC | 5 cut(s) | 283, 888, 1226, 3626, 3975 |
| Eco31I | GGTCTC | 1 cut(s) | 1321 |
| Eco32I | GATATC | 3 cut(s) | 2994, 3490, 3694 |
| Eco47I | GGWCC | 5 cut(s) | 1711, 2170, 2882, 3167, 3664 |
| Eco53kI | GAGCTC | 2 cut(s) | 886, 3624 |
| Eco57I | CTGAAG | 6 cut(s) | 342, 467, 1256, 2412, 2825, 3832 |
| Eco81I | CCTNAGG | 1 cut(s) | 3081 |
| EcoICRI | GAGCTC | 2 cut(s) | 886, 3624 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1222, 1223, 2170 |
| EcoRI | GAATTC | 1 cut(s) | 1014 |
| EcoRII | CCWGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| EcoRV | GATATC | 3 cut(s) | 2994, 3490, 3694 |
| EcoT14I | CCWWGG | 8 cut(s) | 1830, 2124, 2215, 2763, 3272, 3319, 3790, 3889 |
| EcoT22I | ATGCAT | 1 cut(s) | 2606 |
| EcoT38I | GRGCYC | 5 cut(s) | 283, 888, 1226, 3626, 3975 |
| ErhI | CCWWGG | 8 cut(s) | 1830, 2124, 2215, 2763, 3272, 3319, 3790, 3889 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2989, 3021 |
| FaqI | GGGAC | 1 cut(s) | 742 |
| FauI | CCCGC | 2 cut(s) | 492, 2687 |
| FauNDI | CATATG | 1 cut(s) | 4061 |
| FbaI | TGATCA | 2 cut(s) | 3136, 3555 |
| FblI | GTMKAC | 1 cut(s) | 2320 |
| FokI | GGATG | 4 cut(s) | 668, 728, 1214, 2389 |
| FriOI | GRGCYC | 5 cut(s) | 283, 888, 1226, 3626, 3975 |
| FspBI | CTAG | 9 cut(s) | 255, 876, 1137, 1382, 2418, 2634, 2787, 3872, 4053 |
| GlaI | GCGC | 2 cut(s) | 1798, 2385 |
| GsaI | CCCAGC | 1 cut(s) | 1315 |
| GsuI | CTGGAG | 2 cut(s) | 1303, 2372 |
| HaeIII | GGCC | 7 cut(s) | 1224, 1380, 1408, 2297, 2400, 3318, 3683 |
| HapII | CCGG | 4 cut(s) | 866, 1108, 2187, 3986 |
| HhaI | GCGC | 2 cut(s) | 1799, 2386 |
| Hin6I | GCGC | 2 cut(s) | 1797, 2384 |
| HinP1I | GCGC | 2 cut(s) | 1797, 2384 |
| HincII | GTYRAC | 2 cut(s) | 99, 1189 |
| HindII | GTYRAC | 2 cut(s) | 99, 1189 |
| HindIII | AAGCTT | 1 cut(s) | 3266 |
| HpaI | GTTAAC | 1 cut(s) | 1189 |
| HpaII | CCGG | 4 cut(s) | 866, 1108, 2187, 3986 |
| Hpy166II | GTNNAC | 9 cut(s) | 99, 833, 1189, 2110, 2321, 3128, 3155, 3664, 3922 |
| Hpy8I | GTNNAC | 9 cut(s) | 99, 833, 1189, 2110, 2321, 3128, 3155, 3664, 3922 |
| Hpy99I | CGWCG | 1 cut(s) | 368 |
| HpyAV | CCTTC | 9 cut(s) | 121, 686, 1942, 2161, 2548, 2683, 2831, 2849, 4089 |
| HpyCH4III | ACNGT | 5 cut(s) | 332, 652, 862, 1516, 3338 |
| HpyCH4IV | ACGT | 3 cut(s) | 72, 297, 2411 |
| HpySE526I | ACGT | 3 cut(s) | 72, 297, 2411 |
| HspAI | GCGC | 2 cut(s) | 1797, 2384 |
| Kpn2I | TCCGGA | 2 cut(s) | 865, 2186 |
| Ksp22I | TGATCA | 2 cut(s) | 3136, 3555 |
| KspAI | GTTAAC | 1 cut(s) | 1189 |
| LmnI | GCTCC | 9 cut(s) | 478, 883, 1010, 1270, 1434, 1813, 2957, 3621, 3836 |
| LweI | GCATC | 5 cut(s) | 646, 2122, 2878, 3011, 3386 |
| MabI | ACCWGGT | 1 cut(s) | 2797 |
| MaeI | CTAG | 9 cut(s) | 255, 876, 1137, 1382, 2418, 2634, 2787, 3872, 4053 |
| MaeII | ACGT | 3 cut(s) | 72, 297, 2411 |
| MfeI | CAATTG | 2 cut(s) | 1356, 2034 |
| MflI | RGATCY | 5 cut(s) | 1234, 1254, 2219, 2649, 3343 |
| MhlI | GDGCHC | 8 cut(s) | 283, 505, 888, 1226, 1341, 1521, 3626, 3975 |
| MlsI | TGGCCA | 2 cut(s) | 3318, 3683 |
| MluNI | TGGCCA | 2 cut(s) | 3318, 3683 |
| MlyI | GAGTC | 6 cut(s) | 116, 610, 878, 1175, 2199, 2825 |
| MmeI | TCCRAC | 7 cut(s) | 473, 2206, 2224, 2428, 3080, 3721, 3856 |
| Mox20I | TGGCCA | 2 cut(s) | 3318, 3683 |
| Mph1103I | ATGCAT | 1 cut(s) | 2606 |
| MroI | TCCGGA | 2 cut(s) | 865, 2186 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2277 |
| MscI | TGGCCA | 2 cut(s) | 3318, 3683 |
| MslI | CAYNNNNRTG | 4 cut(s) | 893, 1170, 1334, 2462 |
| Msp20I | TGGCCA | 2 cut(s) | 3318, 3683 |
| MspA1I | CMGCKG | 2 cut(s) | 1445, 3041 |
| MspI | CCGG | 4 cut(s) | 866, 1108, 2187, 3986 |
| MspR9I | CCNGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| MunI | CAATTG | 2 cut(s) | 1356, 2034 |
| Mva1269I | GAATGC | 3 cut(s) | 1871, 1930, 2706 |
| MvaI | CCWGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| MvnI | CGCG | 1 cut(s) | 23 |
| NcoI | CCATGG | 3 cut(s) | 3272, 3319, 3790 |
| NdeI | CATATG | 1 cut(s) | 4061 |
| NheI | GCTAGC | 1 cut(s) | 4052 |
| NlaIV | GGNNCC | 7 cut(s) | 1146, 1224, 1256, 1713, 1809, 2651, 3278 |
| NmeAIII | GCCGAG | 1 cut(s) | 1777 |
| NmuCI | GTSAC | 8 cut(s) | 616, 1213, 1539, 1552, 1879, 2828, 2860, 4012 |
| NsiI | ATGCAT | 1 cut(s) | 2606 |
| NspI | RCATGY | 8 cut(s) | 549, 1751, 1791, 2317, 2333, 2702, 3210, 3776 |
| OliI | CACNNNNGTG | 1 cut(s) | 1334 |
| PaeI | GCATGC | 2 cut(s) | 549, 2702 |
| PagI | TCATGA | 1 cut(s) | 888 |
| PceI | AGGCCT | 1 cut(s) | 1380 |
| PciI | ACATGT | 2 cut(s) | 1787, 2313 |
| PctI | GAATGC | 3 cut(s) | 1871, 1930, 2706 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2277 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3618 |
| Ple19I | CGATCG | 1 cut(s) | 171 |
| PleI | GAGTC | 6 cut(s) | 116, 609, 877, 1175, 2198, 2825 |
| PpsI | GAGTC | 6 cut(s) | 116, 609, 877, 1175, 2198, 2825 |
| PpuMI | RGGWCCY | 1 cut(s) | 2170 |
| PscI | ACATGT | 2 cut(s) | 1787, 2313 |
| PshBI | ATTAAT | 2 cut(s) | 39, 2261 |
| PsiI | TTATAA | 2 cut(s) | 2075, 3371 |
| Psp124BI | GAGCTC | 2 cut(s) | 888, 3626 |
| Psp1406I | AACGTT | 1 cut(s) | 2411 |
| Psp5II | RGGWCCY | 1 cut(s) | 2170 |
| Psp6I | CCWGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| PspFI | CCCAGC | 1 cut(s) | 1311 |
| PspGI | CCWGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| PspN4I | GGNNCC | 7 cut(s) | 1146, 1224, 1256, 1713, 1809, 2651, 3278 |
| PspOMI | GGGCCC | 1 cut(s) | 1222 |
| PspPI | GGNCC | 8 cut(s) | 1222, 1223, 1711, 2170, 2399, 2882, 3167, 3664 |
| PspPPI | RGGWCCY | 1 cut(s) | 2170 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1368, 1400 |
| PstI | CTGCAG | 2 cut(s) | 1783, 2068 |
| PstNI | CAGNNNCTG | 3 cut(s) | 604, 3532, 3713 |
| PsuI | RGATCY | 5 cut(s) | 1234, 1254, 2219, 2649, 3343 |
| PvuI | CGATCG | 1 cut(s) | 171 |
| PvuII | CAGCTG | 1 cut(s) | 3041 |
| RseI | CAYNNNNRTG | 4 cut(s) | 893, 1170, 1334, 2462 |
| SacI | GAGCTC | 2 cut(s) | 888, 3626 |
| Sau96I | GGNCC | 8 cut(s) | 1222, 1223, 1711, 2170, 2399, 2882, 3167, 3664 |
| ScaI | AGTACT | 1 cut(s) | 2062 |
| SchI | GAGTC | 6 cut(s) | 116, 610, 878, 1175, 2199, 2825 |
| ScrFI | CCNGG | 4 cut(s) | 828, 2799, 3647, 3941 |
| SduI | GDGCHC | 8 cut(s) | 283, 505, 888, 1226, 1341, 1521, 3626, 3975 |
| SexAI | ACCWGGT | 1 cut(s) | 2797 |
| SfaNI | GCATC | 5 cut(s) | 646, 2122, 2878, 3011, 3386 |
| SfcI | CTRYAG | 4 cut(s) | 1779, 2064, 2917, 3567 |
| SinI | GGWCC | 5 cut(s) | 1711, 2170, 2882, 3167, 3664 |
| SmiI | ATTTAAAT | 1 cut(s) | 3111 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 893, 1170, 1334, 2462 |
| SmlI | CTYRAG | 5 cut(s) | 550, 957, 1239, 3460, 3898 |
| SmoI | CTYRAG | 5 cut(s) | 550, 957, 1239, 3460, 3898 |
| SpeI | ACTAGT | 1 cut(s) | 2633 |
| SphI | GCATGC | 2 cut(s) | 549, 2702 |
| SseBI | AGGCCT | 1 cut(s) | 1380 |
| SsiI | CCGC | 4 cut(s) | 92, 499, 1445, 2680 |
| SspI | AATATT | 1 cut(s) | 1567 |
| SspMI | CTAG | 9 cut(s) | 255, 876, 1137, 1382, 2418, 2634, 2787, 3872, 4053 |
| SstI | GAGCTC | 2 cut(s) | 888, 3626 |
| StuI | AGGCCT | 1 cut(s) | 1380 |
| StyD4I | CCNGG | 4 cut(s) | 826, 2797, 3645, 3939 |
| StyI | CCWWGG | 8 cut(s) | 1830, 2124, 2215, 2763, 3272, 3319, 3790, 3889 |
| SwaI | ATTTAAAT | 1 cut(s) | 3111 |
| TaaI | ACNGT | 5 cut(s) | 332, 652, 862, 1516, 3338 |
| TaiI | ACGT | 3 cut(s) | 75, 300, 2414 |
| TaqI | TCGA | 3 cut(s) | 171, 2165, 3020 |
| TatI | WGTACW | 6 cut(s) | 699, 1744, 2060, 2783, 3200, 3827 |
| TscAI | CASTG | 8 cut(s) | 930, 1831, 2242, 2355, 3294, 3343, 3441, 3856 |
| TseFI | GTSAC | 8 cut(s) | 616, 1213, 1539, 1552, 1879, 2828, 2860, 4012 |
| Tsp45I | GTSAC | 8 cut(s) | 616, 1213, 1539, 1552, 1879, 2828, 2860, 4012 |
| TspGWI | ACGGA | 4 cut(s) | 284, 491, 889, 3377 |
| TspRI | CASTG | 8 cut(s) | 930, 1831, 2242, 2355, 3294, 3343, 3441, 3856 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3618 |
| VpaK11BI | GGWCC | 5 cut(s) | 1711, 2170, 2882, 3167, 3664 |
| VspI | ATTAAT | 2 cut(s) | 39, 2261 |
| XapI | RAATTY | 5 cut(s) | 57, 752, 1014, 1647, 3465 |
| XbaI | TCTAGA | 1 cut(s) | 875 |
| XceI | RCATGY | 8 cut(s) | 549, 1751, 1791, 2317, 2333, 2702, 3210, 3776 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1416, 3045 |
| XmiI | GTMKAC | 1 cut(s) | 2320 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2277 |
| XspI | CTAG | 9 cut(s) | 255, 876, 1137, 1382, 2418, 2634, 2787, 3872, 4053 |
| ZrmI | AGTACT | 1 cut(s) | 2062 |
| Zsp2I | ATGCAT | 1 cut(s) | 2606 |