Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0012818

Physical Location & Seq

Genomic Coordinates Reverse (-)

18062137 .. 18064099

Gene Structure 1963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G179700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1284 bp

ATGGGTTTTGACAAAGAAGCAAGCTCGTCGTCTCAGCGCCTCAGACCACCAGCCCCATCAGAAAACACACCGCTGATCGGAGACCCGGAGCCATTGTCGTCCCAAGGCAAGACCTTTGCCAATGTCTTCATCGCTATTGTGGGTGCAGGCGTTCTGGGCTTGCCTTATTCTTTCAAGCGCACTGGGTGGCTCATGAGCCTCCTCACCCTTTTGCTCGTGGCGTTTCTTACCCACCATTGTATGATGCTGTTGGTCTACACCCGAAGAAAGCTTGAGTCTTCCAATGGATGCACGAAGATCCCATCTTTTGGGGACTTGGGTTTCGCCGTTTGTGGCACTGTAGGGAGGTTGGTGGTCGATGTTCTTATCATTCTTGCTCAGGCTGGGTTTTGCGTCGGCTATCTCATTTTTATTGGTAATACAATGGCCCATTTGCTAAATGCACCCACAGCAACCGATTTGACACCCAAGATTTTGGGTTTGGCACCAAAAAGCTTTTACATTTGGGGGTGTTTTCCGTTCCAGTTGGGGTTGAATTCAATTGCAACGTTGACCCATTTAGCCCCTTTGAGTATTTTTGCTGATGTGATTGATCTTGGAGCAATGGGCGTGGTGATGGTGGAGGATGTGATGGTTATGGCGGCAAAAAGGCCTGAAGTGAAGGCCTTTGGGGACCTTTCTCTGTTCTTTTATGGCCTGGGTGTGGCTGTGTACTCGTTTGAAGGGGTTGGGATGGTTTTGCCTTTAGAGACAGAGACCAAAGACAAGGACAAGTTTGGGTGGATCCTGGGCTGGACCATGACTTTCATTTCTTTGATGTATGGAAGCTTTGGAGCTTTGGGTTACTTTGCTTTTGGGGAAGAAACTAAGGACATGATCACAGCTAATTATGGTGCAGGCGTGATCAGCACTCTGGTGAAGCTTGGTCTTGTGGTGAATCTATTCTTCACATTGCCTATAATGATGCACCCGGTTTATGAGATCATGGAGAGGCGGTTTTGGAGCGGGAGGTATTGCTTATGGTTGAGGTGGGTGCTGGTTTTGGCTGTGAGTTTGGTGGCTTTGTTGGTCCCCAATTTTGCTGATTTCATGTCTTTGGTGGGGAGTGGTGTATGCTGTGCATTGGGGTTTGTTTTGCCTACCTTGTTTCACCTGATGGTTTTCAAGGGAGAGATGGGGTGGAGACAATGGTCTTCAGATGTAAGCATTTTGGTGTTAGGACTTGTTCTTGCGCTTTCAGGAACTTGGTCTGCTCTACAAGAGATTTTCTCCATCAAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015175 GO:0015318 GO:0015711 GO:0015804 GO:0015849 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098656 GO:0098805 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

428

Amino Acids

46.6

Weight (kDa)

6.59

Isoelectric Point (pI)

35.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42005 AT4G38250
fragaria_vesca	FvH4_2g16760
malus_domestica	MD10G1141500.v1.1
prunus_persica	Prupe.8G179700_v2.0.a1
pyrus_communis	pycom05g13360 pycom10g12110
rosa_chinensis	RchiOBHm_Chr6g0280881
rosa_laevigata	RLG00000013023
rosa_multiflora	Rmu_sc0004772.1_g000003
rosa_roxburghii	Rroxscaffold_7G00187530
rosa_rugosa	Rorug06G0136000
rosa_samantha	Rh6AG248800 Rh6BG250500 Rh6BG250700 Rh6CG251500 Rh6DG243200
rosa_wichuraiana	Rw6G021510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	484
AccB7I	CCANNNNNTGG	1 cut(s)	308
AccBSI	CCGCTC	1 cut(s)	1005
AccI	GTMKAC	1 cut(s)	255
AciI	CCGC	4 cut(s)	71, 641, 994, 1005
AclI	AACGTT	1 cut(s)	548
AclWI	GGATC	3 cut(s)	292, 778, 791
AcsI	RAATTY	1 cut(s)	535
AcuI	CTGAAG	2 cut(s)	675, 1179
AdeI	CACNNNGTG	1 cut(s)	186
AfaI	GTAC	1 cut(s)	713
AfiI	CCNNNNNNNGG	3 cut(s)	77, 308, 703
AgsI	TTSAA	5 cut(s)	175, 535, 540, 722, 1165
AjnI	CCWGG	2 cut(s)	696, 786
AleI	CACNNNNGTG	1 cut(s)	914
AluBI	AGCT	7 cut(s)	24, 271, 495, 828, 836, 884, 922
AluI	AGCT	7 cut(s)	24, 271, 495, 828, 836, 884, 922
Alw26I	GTCTC	5 cut(s)	36, 75, 743, 749, 1177
AlwI	GGATC	3 cut(s)	292, 778, 791
AoxI	GGCC	4 cut(s)	426, 650, 663, 694
ApoI	RAATTY	1 cut(s)	535
ArsI	GACNNNNNNTTYG	2 cut(s)	305, 337
Asp700I	GAANNNNTTC	1 cut(s)	941
AspLEI	GCGC	3 cut(s)	39, 180, 1234
AspS9I	GGNCC	4 cut(s)	427, 673, 795, 1069
AsuC2I	CCSGG	2 cut(s)	86, 971
AsuHPI	GGTGA	5 cut(s)	196, 625, 928, 946, 1142
AvaII	GGWCC	3 cut(s)	673, 795, 1069
BamHI	GGATCC	1 cut(s)	783
BanI	GGYRCC	1 cut(s)	484
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	3 cut(s)	118, 270, 1185
BccI	CCATC	8 cut(s)	64, 310, 610, 625, 727, 1150, 1168, 1280
BceAI	ACGGC	1 cut(s)	311
BcgI	CGANNNNNNTGC	2 cut(s)	9, 43
BciT130I	CCWGG	2 cut(s)	698, 788
BclI	TGATCA	2 cut(s)	876, 903
BcnI	CCSGG	2 cut(s)	86, 971
BcoDI	GTCTC	5 cut(s)	36, 75, 743, 749, 1177
BfmI	CTRYAG	1 cut(s)	339
BfoI	RGCGCY	1 cut(s)	40
BisI	GCNGC	1 cut(s)	642
BlsI	GCNGC	1 cut(s)	643
Bme1390I	CCNGG	4 cut(s)	86, 698, 788, 971
Bme18I	GGWCC	3 cut(s)	673, 795, 1069
BmgT120I	GGNCC	4 cut(s)	427, 673, 795, 1069
BmiI	GGNNCC	5 cut(s)	90, 486, 674, 785, 1071
BmrFI	CCNGG	4 cut(s)	86, 698, 788, 971
BmrI	ACTGGG	1 cut(s)	192
BmsI	GCATC	3 cut(s)	234, 278, 954
BmuI	ACTGGG	1 cut(s)	192
BoxI	GACNNNNGTC	1 cut(s)	1189
BpiI	GAAGAC	3 cut(s)	118, 270, 1185
BplI	GAGNNNNNCTC	1 cut(s)	1253
Bpu10I	CCTNAGC	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	293
BpuMI	CCSGG	2 cut(s)	86, 971
BsaI	GGTCTC	2 cut(s)	75, 749
BsaJI	CCNNGG	3 cut(s)	103, 697, 787
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 980, 1010
Bsc4I	CCNNNNNNNGG	3 cut(s)	77, 308, 703
Bse1I	ACTGG	2 cut(s)	187, 523
Bse3DI	GCAATG	2 cut(s)	609, 950
BseBI	CCWGG	2 cut(s)	698, 788
BseDI	CCNNGG	3 cut(s)	103, 697, 787
BseGI	GGATG	3 cut(s)	293, 631, 738
BseLI	CCNNNNNNNGG	3 cut(s)	77, 308, 703
BseMI	GCAATG	2 cut(s)	609, 950
BseMII	CTCAG	3 cut(s)	47, 55, 392
BseNI	ACTGG	2 cut(s)	187, 523
BseRI	GAGGAG	1 cut(s)	191
BseYI	CCCAGC	1 cut(s)	383
BsgI	GTGCAG	2 cut(s)	165, 915
BshFI	GGCC	4 cut(s)	428, 652, 665, 696
BshNI	GGYRCC	1 cut(s)	484
BsiSI	CCGG	2 cut(s)	86, 971
BslFI	GGGAC	4 cut(s)	85, 326, 686, 1055
BslI	CCNNNNNNNGG	3 cut(s)	77, 308, 703
BsmAI	GTCTC	5 cut(s)	36, 75, 743, 749, 1177
BsmBI	CGTCTC	1 cut(s)	36
BsmFI	GGGAC	4 cut(s)	85, 326, 686, 1055
BsnI	GGCC	4 cut(s)	428, 652, 665, 696
Bso31I	GGTCTC	2 cut(s)	75, 749
Bsp143I	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
BspACI	CCGC	4 cut(s)	71, 641, 994, 1005
BspANI	GGCC	4 cut(s)	428, 652, 665, 696
BspCNI	CTCAG	3 cut(s)	46, 54, 391
BspHI	TCATGA	1 cut(s)	192
BspLI	GGNNCC	5 cut(s)	90, 486, 674, 785, 1071
BspPI	GGATC	3 cut(s)	292, 778, 791
BspT107I	GGYRCC	1 cut(s)	484
BspTNI	GGTCTC	2 cut(s)	75, 749
BsrBI	CCGCTC	1 cut(s)	1005
BsrDI	GCAATG	2 cut(s)	609, 950
BsrI	ACTGG	2 cut(s)	187, 523
BssECI	CCNNGG	3 cut(s)	103, 697, 787
BssMI	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	1 cut(s)	103
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	2 cut(s)	698, 788
Bst4CI	ACNGT	1 cut(s)	340
BstC8I	GCNNGC	4 cut(s)	22, 148, 161, 898
BstDEI	CTNAG	4 cut(s)	33, 41, 378, 867
BstF5I	GGATG	3 cut(s)	293, 631, 738
BstH2I	RGCGCY	1 cut(s)	40
BstHHI	GCGC	3 cut(s)	39, 180, 1234
BstKTI	GATC	7 cut(s)	78, 300, 595, 786, 879, 906, 984
BstMAI	GTCTC	5 cut(s)	36, 75, 743, 749, 1177
BstMBI	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
BstMWI	GCNNNNNNNGC	3 cut(s)	156, 449, 906
BstNI	CCWGG	2 cut(s)	698, 788
BstPAI	GACNNNNGTC	1 cut(s)	1189
BstSCI	CCNGG	4 cut(s)	84, 696, 786, 969
BstSFI	CTRYAG	1 cut(s)	339
BstV2I	GAAGAC	3 cut(s)	118, 270, 1185
BstX2I	RGATCY	2 cut(s)	297, 783
BstXI	CCANNNNNNTGG	1 cut(s)	475
BstYI	RGATCY	2 cut(s)	297, 783
BsuRI	GGCC	4 cut(s)	428, 652, 665, 696
BtgZI	GCGATG	1 cut(s)	115
BtsCI	GGATG	3 cut(s)	293, 631, 738
BtsIMutI	CAGTG	2 cut(s)	180, 336
Cac8I	GCNNGC	4 cut(s)	22, 148, 161, 898
CciI	TCATGA	1 cut(s)	192
CfoI	GCGC	3 cut(s)	39, 180, 1234
Cfr13I	GGNCC	4 cut(s)	427, 673, 795, 1069
CseI	GACGC	1 cut(s)	382
Csp6I	GTAC	1 cut(s)	712
CspCI	CAANNNNNGTGG	2 cut(s)	591, 626
CviAII	CATG	5 cut(s)	193, 799, 874, 985, 1090
CviQI	GTAC	1 cut(s)	712
DdeI	CTNAG	4 cut(s)	33, 41, 378, 867
DpnI	GATC	7 cut(s)	77, 299, 594, 785, 878, 905, 983
DpnII	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
DraIII	CACNNNGTG	1 cut(s)	186
Eco130I	CCWWGG	1 cut(s)	103
Eco147I	AGGCCT	2 cut(s)	652, 665
Eco31I	GGTCTC	2 cut(s)	75, 749
Eco47I	GGWCC	3 cut(s)	673, 795, 1069
Eco57I	CTGAAG	2 cut(s)	675, 1179
EcoO109I	RGGNCCY	1 cut(s)	673
EcoRI	GAATTC	1 cut(s)	535
EcoRII	CCWGG	2 cut(s)	696, 786
EcoT14I	CCWWGG	1 cut(s)	103
ErhI	CCWWGG	1 cut(s)	103
Esp3I	CGTCTC	1 cut(s)	36
FaeI	CATG	5 cut(s)	196, 802, 877, 988, 1093
FaqI	GGGAC	4 cut(s)	85, 326, 686, 1055
FatI	CATG	5 cut(s)	192, 798, 873, 984, 1089
FauI	CCCGC	1 cut(s)	998
FbaI	TGATCA	2 cut(s)	876, 903
FblI	GTMKAC	1 cut(s)	255
Fnu4HI	GCNGC	1 cut(s)	642
FokI	GGATG	3 cut(s)	300, 638, 745
Fsp4HI	GCNGC	1 cut(s)	642
GlaI	GCGC	3 cut(s)	38, 179, 1233
GluI	GCNGC	1 cut(s)	642
GsaI	CCCAGC	1 cut(s)	387
HaeII	RGCGCY	1 cut(s)	40
HaeIII	GGCC	4 cut(s)	428, 652, 665, 696
HapII	CCGG	2 cut(s)	86, 971
HgaI	GACGC	1 cut(s)	382
HhaI	GCGC	3 cut(s)	39, 180, 1234
Hin1II	CATG	5 cut(s)	196, 802, 877, 988, 1093
Hin6I	GCGC	3 cut(s)	37, 178, 1232
HinP1I	GCGC	3 cut(s)	37, 178, 1232
HincII	GTYRAC	1 cut(s)	552
HindII	GTYRAC	1 cut(s)	552
HindIII	AAGCTT	4 cut(s)	269, 493, 826, 920
HinfI	GANTC	2 cut(s)	275, 937
HpaII	CCGG	2 cut(s)	86, 971
HphI	GGTGA	5 cut(s)	196, 625, 928, 946, 1142
Hpy166II	GTNNAC	3 cut(s)	256, 552, 712
Hpy188I	TCNGA	4 cut(s)	44, 61, 80, 1198
Hpy188III	TCNNGA	2 cut(s)	193, 1239
Hpy8I	GTNNAC	3 cut(s)	256, 552, 712
Hpy99I	CGWCG	2 cut(s)	31, 398
HpyAV	CCTTC	2 cut(s)	655, 716
HpyCH4III	ACNGT	1 cut(s)	340
HpyCH4IV	ACGT	1 cut(s)	548
HpyCH4V	TGCA	7 cut(s)	146, 291, 443, 545, 896, 967, 1121
HpyF10VI	GCNNNNNNNGC	3 cut(s)	156, 449, 906
HpyF3I	CTNAG	4 cut(s)	33, 41, 378, 867
HpySE526I	ACGT	1 cut(s)	548
Hsp92II	CATG	5 cut(s)	196, 802, 877, 988, 1093
HspAI	GCGC	3 cut(s)	37, 178, 1232
Ksp22I	TGATCA	2 cut(s)	876, 903
Kzo9I	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
LmnI	GCTCC	4 cut(s)	88, 599, 833, 1002
LweI	GCATC	3 cut(s)	234, 278, 954
MaeII	ACGT	1 cut(s)	548
MaeIII	GTNAC	1 cut(s)	842
MalI	GATC	7 cut(s)	77, 299, 594, 785, 878, 905, 983
MbiI	CCGCTC	1 cut(s)	1005
MboI	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
MboII	GAAGA	7 cut(s)	118, 270, 276, 307, 872, 937, 1185
MfeI	CAATTG	1 cut(s)	540
MflI	RGATCY	2 cut(s)	297, 783
MluCI	AATT	4 cut(s)	535, 540, 886, 1075
MlyI	GAGTC	1 cut(s)	284
MnlI	CCTC	8 cut(s)	50, 209, 212, 339, 616, 984, 1002, 1020
MroXI	GAANNNNTTC	1 cut(s)	941
MslI	CAYNNNNRTG	2 cut(s)	914, 1211
MspA1I	CMGCKG	1 cut(s)	73
MspI	CCGG	2 cut(s)	86, 971
MspR9I	CCNGG	4 cut(s)	86, 698, 788, 971
MunI	CAATTG	1 cut(s)	540
MvaI	CCWGG	2 cut(s)	698, 788
MwoI	GCNNNNNNNGC	3 cut(s)	156, 449, 906
NciI	CCSGG	2 cut(s)	86, 971
NdeII	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
NlaIII	CATG	5 cut(s)	196, 802, 877, 988, 1093
NlaIV	GGNNCC	5 cut(s)	90, 486, 674, 785, 1071
OliI	CACNNNNGTG	1 cut(s)	914
PagI	TCATGA	1 cut(s)	192
PceI	AGGCCT	2 cut(s)	652, 665
PdmI	GAANNNNTTC	1 cut(s)	941
PfeI	GAWTC	1 cut(s)	937
PflMI	CCANNNNNTGG	1 cut(s)	308
PkrI	GCNGC	1 cut(s)	643
PleI	GAGTC	1 cut(s)	283
PpsI	GAGTC	1 cut(s)	283
PpuMI	RGGWCCY	1 cut(s)	673
PshAI	GACNNNNGTC	1 cut(s)	1189
Psp1406I	AACGTT	1 cut(s)	548
Psp5II	RGGWCCY	1 cut(s)	673
Psp6I	CCWGG	2 cut(s)	696, 786
PspFI	CCCAGC	1 cut(s)	383
PspGI	CCWGG	2 cut(s)	696, 786
PspN4I	GGNNCC	5 cut(s)	90, 486, 674, 785, 1071
PspPI	GGNCC	4 cut(s)	427, 673, 795, 1069
PspPPI	RGGWCCY	1 cut(s)	673
PsuI	RGATCY	2 cut(s)	297, 783
RsaI	GTAC	1 cut(s)	713
RsaNI	GTAC	1 cut(s)	712
RseI	CAYNNNNRTG	2 cut(s)	914, 1211
SatI	GCNGC	1 cut(s)	642
Sau3AI	GATC	7 cut(s)	75, 297, 592, 783, 876, 903, 981
Sau96I	GGNCC	4 cut(s)	427, 673, 795, 1069
SchI	GAGTC	1 cut(s)	284
ScrFI	CCNGG	4 cut(s)	86, 698, 788, 971
SfaNI	GCATC	3 cut(s)	234, 278, 954
SfcI	CTRYAG	1 cut(s)	339
SinI	GGWCC	3 cut(s)	673, 795, 1069
SmiMI	CAYNNNNRTG	2 cut(s)	914, 1211
SmlI	CTYRAG	1 cut(s)	272
SmoI	CTYRAG	1 cut(s)	272
Sse9I	AATT	4 cut(s)	535, 540, 886, 1075
SseBI	AGGCCT	2 cut(s)	652, 665
SsiI	CCGC	4 cut(s)	71, 641, 994, 1005
StuI	AGGCCT	2 cut(s)	652, 665
StyD4I	CCNGG	4 cut(s)	84, 696, 786, 969
StyI	CCWWGG	1 cut(s)	103
TaaI	ACNGT	1 cut(s)	340
TaiI	ACGT	1 cut(s)	551
TaqI	TCGA	1 cut(s)	357
TasI	AATT	4 cut(s)	535, 540, 886, 1075
TatI	WGTACW	1 cut(s)	711
TauI	GCSGC	1 cut(s)	644
TfiI	GAWTC	1 cut(s)	937
TscAI	CASTG	2 cut(s)	187, 343
TspDTI	ATGAA	3 cut(s)	118, 796, 1078
TspGWI	ACGGA	1 cut(s)	507
TspRI	CASTG	2 cut(s)	187, 343
Van91I	CCANNNNNTGG	1 cut(s)	308
VpaK11BI	GGWCC	3 cut(s)	673, 795, 1069
XapI	RAATTY	1 cut(s)	535
XmiI	GTMKAC	1 cut(s)	255
XmnI	GAANNNNTTC	1 cut(s)	941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.