Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005323

Physical Location & Seq

Genomic Coordinates Reverse (-)

19227633 .. 19233956

Gene Structure 6324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0136000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGCTACCCAGAAACACTCGCCTGCTATAAAGGGCGCCAAAGTTCTCATGGTTGGAGCAGGAGGTATCGGCTGCGAGCTCCTCAAGACTCTCGCTCTCTCTGGCTTCCAAGACATTCATATTATTGACATGGACACTATAGAAGTCAGTAACCTCAACAGGCAATTCCTCTTTCGACAATCGCATGTTGGGCAATCCAAGGCCAAAGTTGCTCGGGATGCTGTCTTAAAATTTAGGCCTCACATAAGCATTACTCCATACCATGCAAATGTTAAGGACCCTGACTTCAACGTGGATTTCTTTAAACAGTTTAACGTTGTTTTGAATGGACTTGACAACTTGGATGCCAGGCGACATGTGAATCGCCTATGCTTGGCAGCTGATGTTCCTTTAATCGAAAGTGGGACTACTGGGTTCCTTGGACAGGTGACTGTACATGTGAAGGGAATAACAGAGTGCTATGAATGCCAGCCTAAACCTGCTCCCAAAACGTACCCTGTCTGCACCATAACGAGCACTCCATCAAAGTTTGTTCACTGCATTGTATGGGCGAAGGAACTGCTCTTTGCAAAGTTGTTTGGGGACAAGAGTCAGGCCAATGATTTGAATGTGCGTTCCAGTGATGGTGCTAGCTCATCAGAACAGGCAGAAGATGTTTTTGAGCATAGGAAAGATGAAGACATTGAGCAGTATGGAAGAAGAATATATGATCATGTATTTGGTTATAACATTGAGGTAGCTTTGTCTAATGAGGAGACATGGAAGAACCGTAATAGACCAAAGCCCATATATAGTAGGGATGCCATGCCTGTTGATGTCAGTCAACAGAATGGAAATGTGGAAAAAAATGGTGCAACCAATGATCCATCTTCAGTATCTGCCATGGTATCTCTAGGACTGAAGAATCCACAAGATGTGTGGAGCCTTATGGAAAATTCTAGAGTCTTTCTTGAGGCTTTGAAACTATTTTTCATGAAAAGGGGAAAGGAGATTGGAAACATGATTTTTGATAAAGATGATCAGCTAGCTGTAGAATTTGTTACTGCTGCCGCAAACATAAGGGCCACTGCTTTTGGCATCCCATTGCATAGTCTATTTGAAGCTAAAGGTATTGCTGGTAATATTGTCCATGCTGTTGCAACAACAAATGCAATTATTGCTGGGTTGATTGTCATTGAGACAGTCAAGGTGCTGCAAAATGACGCAAAAAATTACAGGATGACTTATTGTCTGGAACATCCAACAAGAAAGATGCTACTCATGCCAGTGGAACCATTTGAACCTAACAAGTCCTGCTATGTCTGTTCGGAGACACCACTATTATTAGAGATCAACACCAACCGTGCAAAATTGCGGGACATAGTTGAAAAGATAGTTAAAAACAAGCTTGGAATGAACTCTCCACTCATTATGCACGGAGCAGCCCTTCTTTATGAAGTTGGTGATGACCTGGATGAAGCCATGATAAAAAATTATGCAGCGAATCTTGATAAGGTGCTATCTGAGTTTCCTTCTCCAGTTACTAGTGGAACCATGCTGACAATTGAGGATCTTCAGCAAGAACTGAAATGCAATATCAATATCAAACACAGAGAGGAATTTGATGAGGAGAAGGAACCTGATGGAATGGTTCTATCTGGATGGACTCAAGCTACTTCTGTGGTCAAGGATGACAAGAAGTCCAATGCTAATGTTGGAAGCACATCAAGTGCATCAGAACTGGAGACTGATAAGAATAATGAGATTGAAACTGCTCCTGGAAAGAAAAGAAAACTGTCCGATGTTTCTGAGGCAGATACGTCAAGTGTTGCTGGTGATACAAAAAGTCATGGTAAATTGGAAGTTCTTGACGACGACGATGATGATGTTGTCATGTTTAATGATTGGGATTCAGCCGCCAACAAGAAGTTAAGGTCGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003827 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006464 GO:0006486 GO:0006491 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009628 GO:0009987 GO:0012505 GO:0016262 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0031410 GO:0031982 GO:0031984 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0070085 GO:0071704 GO:0097708 GO:0098791 GO:0140096 GO:0140103 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 map00510 map00513 map01100

Pfam Domains

Protein Families

GNT-I

Protein Analysis

640

Amino Acids

70.96

Weight (kDa)

5.56

Isoelectric Point (pI)

41.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiF	PF00899	10 - 433	2.5e-64	ThiF family
UAE_UbL	PF14732	442 - 534	2.2e-24	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38240 AT4G38240 AT4G38240
fragaria_vesca	FvH4_2g16770 FvH4_2g16770 FvH4_2g16770 FvH4_2g16770 FvH4_2g16770 FvH4_2g16770
malus_domestica	MD05G1138700.v1.1 MD10G1141600.v1.1
prunus_persica	Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1 Prupe.8G179800_v2.0.a1
pyrus_communis	pycom05g13380 pycom10g12120
rosa_chinensis	RchiOBHm_Chr6g0280891
rosa_laevigata	RLG00000013022
rosa_roxburghii	Rroxscaffold_7G00187520
rosa_rugosa	Rorug06G0136000
rosa_samantha	Rh6AG248900 Rh6BG250800 Rh6CG251600 Rh6DG243300
rosa_wichuraiana	Rw6G021520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	726
Acc36I	ACCTGC	1 cut(s)	487
AccB1I	GGYRCC	1 cut(s)	35
AciI	CCGC	3 cut(s)	1050, 1354, 1896
AclI	AACGTT	1 cut(s)	315
AclWI	GGATC	2 cut(s)	857, 1557
AcsI	RAATTY	4 cut(s)	230, 934, 1034, 1598
AcuI	CTGAAG	3 cut(s)	855, 920, 1538
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	2 cut(s)	435, 494
AfiI	CCNNNNNNNGG	2 cut(s)	373, 424
AflIII	ACRYGT	2 cut(s)	355, 436
AgsI	TTSAA	8 cut(s)	289, 325, 607, 961, 1100, 1280, 1367, 1748
AhdI	GACNNNNNGTC	2 cut(s)	1227, 1678
AhlI	ACTAGT	1 cut(s)	1523
AjnI	CCWGG	3 cut(s)	347, 1449, 1756
AluBI	AGCT	9 cut(s)	79, 380, 633, 740, 1024, 1028, 1103, 1387, 1652
AluI	AGCT	9 cut(s)	79, 380, 633, 740, 1024, 1028, 1103, 1387, 1652
Alw21I	GWGCWC	2 cut(s)	81, 518
Alw26I	GTCTC	4 cut(s)	749, 1172, 1304, 1718
AlwI	GGATC	2 cut(s)	857, 1557
AlwNI	CAGNNNCTG	1 cut(s)	878
Ama87I	CYCGRG	1 cut(s)	213
AoxI	GGCC	4 cut(s)	201, 236, 594, 1062
ApeKI	GCWGC	6 cut(s)	72, 377, 1046, 1192, 1421, 1478
ApoI	RAATTY	4 cut(s)	230, 934, 1034, 1598
AspLEI	GCGC	1 cut(s)	38
AspS9I	GGNCC	2 cut(s)	277, 1062
AsuHPI	GGTGA	3 cut(s)	439, 1454, 1826
AsuNHI	GCTAGC	2 cut(s)	629, 1024
AvaI	CYCGRG	1 cut(s)	213
AvaII	GGWCC	1 cut(s)	277
BanI	GGYRCC	1 cut(s)	35
BanII	GRGCYC	1 cut(s)	81
BbsI	GAAGAC	1 cut(s)	684
Bbv12I	GWGCWC	2 cut(s)	81, 518
BbvI	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BccI	CCATC	5 cut(s)	529, 617, 874, 1616, 1635
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	3 cut(s)	349, 1451, 1758
BclI	TGATCA	2 cut(s)	709, 1018
BcoDI	GTCTC	4 cut(s)	749, 1172, 1304, 1718
BcuI	ACTAGT	1 cut(s)	1523
BfaI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
BfmI	CTRYAG	2 cut(s)	138, 1029
BfoI	RGCGCY	1 cut(s)	39
BfuAI	ACCTGC	1 cut(s)	487
BisI	GCNGC	8 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479, 1896
BlsI	GCNGC	8 cut(s)	74, 379, 1048, 1051, 1194, 1423, 1480, 1897
Bme1390I	CCNGG	3 cut(s)	349, 1451, 1758
Bme18I	GGWCC	1 cut(s)	277
BmeRI	GACNNNNNGTC	2 cut(s)	1227, 1678
BmeT110I	CYCGRG	1 cut(s)	213
BmgT120I	GGNCC	2 cut(s)	277, 1062
BmiI	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
BmrFI	CCNGG	3 cut(s)	349, 1451, 1758
BmrI	ACTGGG	1 cut(s)	420
BmsI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1721
BmtI	GCTAGC	2 cut(s)	633, 1028
BmuI	ACTGGG	1 cut(s)	420
BoxI	GACNNNNGTC	1 cut(s)	588
BpiI	GAAGAC	1 cut(s)	684
BpmI	CTGGAG	2 cut(s)	1500, 1742
BpuEI	CTTGAG	3 cut(s)	68, 971, 1632
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	3 cut(s)	198, 418, 882
BsaXI	ACNNNNNCTCC	2 cut(s)	502, 532
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 424
Bse1I	ACTGG	5 cut(s)	415, 618, 1265, 1517, 1725
Bse3DI	GCAATG	1 cut(s)	1082
BseBI	CCWGG	3 cut(s)	349, 1451, 1758
BseDI	CCNNGG	3 cut(s)	198, 418, 882
BseGI	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1675
BseLI	CCNNNNNNNGG	2 cut(s)	373, 424
BseMI	GCAATG	1 cut(s)	1082
BseMII	CTCAG	2 cut(s)	1494, 1779
BseNI	ACTGG	5 cut(s)	415, 618, 1265, 1517, 1725
BseRI	GAGGAG	3 cut(s)	71, 767, 1622
BseXI	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BseYI	CCCAGC	1 cut(s)	1160
BsgI	GTGCAG	1 cut(s)	487
BshFI	GGCC	4 cut(s)	203, 238, 596, 1064
BshNI	GGYRCC	1 cut(s)	35
BsiHKAI	GWGCWC	2 cut(s)	81, 518
BsiHKCI	CYCGRG	1 cut(s)	213
BslFI	GGGAC	3 cut(s)	418, 596, 1370
BslI	CCNNNNNNNGG	2 cut(s)	373, 424
BsmAI	GTCTC	4 cut(s)	749, 1172, 1304, 1718
BsmFI	GGGAC	3 cut(s)	418, 596, 1370
BsmI	GAATGC	1 cut(s)	470
BsnI	GGCC	4 cut(s)	203, 238, 596, 1064
BsoBI	CYCGRG	1 cut(s)	213
Bsp1286I	GDGCHC	2 cut(s)	81, 518
Bsp1407I	TGTACA	1 cut(s)	433
Bsp143I	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
Bsp19I	CCATGG	1 cut(s)	882
BspACI	CCGC	3 cut(s)	1050, 1354, 1896
BspANI	GGCC	4 cut(s)	203, 238, 596, 1064
BspCNI	CTCAG	2 cut(s)	1495, 1780
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
BspMI	ACCTGC	1 cut(s)	487
BspOI	GCTAGC	2 cut(s)	633, 1028
BspPI	GGATC	2 cut(s)	857, 1557
BspT107I	GGYRCC	1 cut(s)	35
BsrDI	GCAATG	1 cut(s)	1082
BsrGI	TGTACA	1 cut(s)	433
BsrI	ACTGG	5 cut(s)	415, 618, 1265, 1517, 1725
BssECI	CCNNGG	3 cut(s)	198, 418, 882
BssMI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	3 cut(s)	198, 418, 882
Bst2UI	CCWGG	3 cut(s)	349, 1451, 1758
Bst4CI	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1776
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstAUI	TGTACA	1 cut(s)	433
BstC8I	GCNNGC	5 cut(s)	24, 77, 470, 631, 1026
BstDEI	CTNAG	2 cut(s)	1503, 1788
BstDSI	CCRYGG	1 cut(s)	882
BstENI	CCTNNNNNAGG	1 cut(s)	422
BstF5I	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1675
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	1 cut(s)	38
BstKTI	GATC	5 cut(s)	712, 865, 1021, 1332, 1552
BstMAI	GTCTC	4 cut(s)	749, 1172, 1304, 1718
BstMBI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
BstMWI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
BstNI	CCWGG	3 cut(s)	349, 1451, 1758
BstNSI	RCATGY	3 cut(s)	188, 359, 440
BstPAI	GACNNNNGTC	1 cut(s)	588
BstSCI	CCNGG	3 cut(s)	347, 1449, 1756
BstSFI	CTRYAG	2 cut(s)	138, 1029
BstV1I	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	1549
BstYI	RGATCY	1 cut(s)	1549
BsuRI	GGCC	4 cut(s)	203, 238, 596, 1064
BtgI	CCRYGG	1 cut(s)	882
BtsCI	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1675
BtsI	GCAGTG	2 cut(s)	535, 1065
BtsIMutI	CAGTG	4 cut(s)	535, 625, 1065, 1272
BveI	ACCTGC	1 cut(s)	487
Cac8I	GCNNGC	5 cut(s)	24, 77, 470, 631, 1026
CaiI	CAGNNNCTG	1 cut(s)	878
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	1 cut(s)	38
Cfr13I	GGNCC	2 cut(s)	277, 1062
CseI	GACGC	1 cut(s)	1211
Csp6I	GTAC	2 cut(s)	434, 493
CspCI	CAANNNNNGTGG	4 cut(s)	899, 934, 1054, 1089
CviQI	GTAC	2 cut(s)	434, 493
DdeI	CTNAG	2 cut(s)	1503, 1788
DinI	GGCGCC	1 cut(s)	37
DpnI	GATC	5 cut(s)	711, 864, 1020, 1331, 1551
DpnII	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
DraI	TTTAAA	1 cut(s)	304
DriI	GACNNNNNGTC	2 cut(s)	1227, 1678
Eam1105I	GACNNNNNGTC	2 cut(s)	1227, 1678
Ecl136II	GAGCTC	1 cut(s)	79
Eco130I	CCWWGG	3 cut(s)	198, 418, 882
Eco147I	AGGCCT	1 cut(s)	238
Eco24I	GRGCYC	1 cut(s)	81
Eco47I	GGWCC	1 cut(s)	277
Eco53kI	GAGCTC	1 cut(s)	79
Eco57I	CTGAAG	3 cut(s)	855, 920, 1538
Eco88I	CYCGRG	1 cut(s)	213
EcoICRI	GAGCTC	1 cut(s)	79
EcoNI	CCTNNNNNAGG	1 cut(s)	422
EcoO109I	RGGNCCY	1 cut(s)	277
EcoRII	CCWGG	3 cut(s)	347, 1449, 1756
EcoT14I	CCWWGG	3 cut(s)	198, 418, 882
EcoT38I	GRGCYC	1 cut(s)	81
EgeI	GGCGCC	1 cut(s)	37
EheI	GGCGCC	1 cut(s)	37
ErhI	CCWWGG	3 cut(s)	198, 418, 882
FaqI	GGGAC	3 cut(s)	418, 596, 1370
FauI	CCCGC	1 cut(s)	1347
FbaI	TGATCA	2 cut(s)	709, 1018
Fnu4HI	GCNGC	8 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479, 1896
FokI	GGATG	9 cut(s)	230, 356, 812, 1064, 1224, 1231, 1466, 1653, 1682
FriOI	GRGCYC	1 cut(s)	81
Fsp4HI	GCNGC	8 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479, 1896
FspBI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
GlaI	GCGC	1 cut(s)	37
GluI	GCNGC	8 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479, 1896
GsaI	CCCAGC	1 cut(s)	1164
GsuI	CTGGAG	2 cut(s)	1500, 1742
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	4 cut(s)	203, 238, 596, 1064
HgaI	GACGC	1 cut(s)	1211
HhaI	GCGC	1 cut(s)	38
Hin1I	GRCGYC	1 cut(s)	36
Hin6I	GCGC	1 cut(s)	36
HinP1I	GCGC	1 cut(s)	36
HincII	GTYRAC	1 cut(s)	824
HindII	GTYRAC	1 cut(s)	824
HindIII	AAGCTT	1 cut(s)	1385
HinfI	GANTC	8 cut(s)	88, 361, 589, 904, 942, 1483, 1645, 1889
HphI	GGTGA	3 cut(s)	439, 1454, 1826
Hpy166II	GTNNAC	2 cut(s)	535, 824
Hpy188I	TCNGA	6 cut(s)	640, 1309, 1504, 1717, 1780, 1789
Hpy188III	TCNNGA	9 cut(s)	85, 215, 939, 950, 973, 1232, 1487, 1638, 1847
Hpy8I	GTNNAC	2 cut(s)	535, 824
Hpy99I	CGWCG	2 cut(s)	1856, 1859
HpyAV	CCTTC	5 cut(s)	436, 547, 1436, 1521, 1606
HpyCH4III	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1776
HpyCH4IV	ACGT	4 cut(s)	291, 315, 491, 1799
HpyF10VI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
HpyF3I	CTNAG	2 cut(s)	1503, 1788
HpySE526I	ACGT	4 cut(s)	291, 315, 491, 1799
Hsp92I	GRCGYC	1 cut(s)	36
HspAI	GCGC	1 cut(s)	36
KasI	GGCGCC	1 cut(s)	35
Ksp22I	TGATCA	2 cut(s)	709, 1018
Kzo9I	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
LmnI	GCTCC	6 cut(s)	56, 84, 487, 921, 1418, 1759
Lsp1109I	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
LweI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1721
MaeI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
MaeII	ACGT	4 cut(s)	291, 315, 491, 1799
MaeIII	GTNAC	4 cut(s)	149, 427, 1039, 1519
MalI	GATC	5 cut(s)	711, 864, 1020, 1331, 1551
MboI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
MboII	GAAGA	8 cut(s)	662, 689, 708, 711, 775, 861, 913, 1544
MfeI	CAATTG	1 cut(s)	1542
MflI	RGATCY	1 cut(s)	1549
MhlI	GDGCHC	2 cut(s)	81, 518
Mly113I	GGCGCC	1 cut(s)	36
MlyI	GAGTC	4 cut(s)	82, 598, 951, 1639
MmeI	TCCRAC	3 cut(s)	34, 1265, 1675
MseI	TTAA	8 cut(s)	227, 273, 303, 312, 392, 1377, 1878, 1910
MslI	CAYNNNNRTG	2 cut(s)	267, 1265
MspA1I	CMGCKG	1 cut(s)	380
MspR9I	CCNGG	3 cut(s)	349, 1451, 1758
MunI	CAATTG	1 cut(s)	1542
Mva1269I	GAATGC	1 cut(s)	470
MvaI	CCWGG	3 cut(s)	349, 1451, 1758
MwoI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
NarI	GGCGCC	1 cut(s)	36
NcoI	CCATGG	1 cut(s)	882
NdeII	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
NheI	GCTAGC	2 cut(s)	629, 1024
NlaIV	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
NmuCI	GTSAC	1 cut(s)	427
NspI	RCATGY	3 cut(s)	188, 359, 440
PagI	TCATGA	1 cut(s)	972
PceI	AGGCCT	1 cut(s)	238
PciI	ACATGT	2 cut(s)	355, 436
PctI	GAATGC	1 cut(s)	470
PfeI	GAWTC	4 cut(s)	361, 904, 1483, 1889
PfoI	TCCNGGA	1 cut(s)	1756
PkrI	GCNGC	8 cut(s)	74, 379, 1048, 1051, 1194, 1423, 1480, 1897
PleI	GAGTC	4 cut(s)	82, 597, 950, 1639
PluTI	GGCGCC	1 cut(s)	39
PpsI	GAGTC	4 cut(s)	82, 597, 950, 1639
PpuMI	RGGWCCY	1 cut(s)	277
PscI	ACATGT	2 cut(s)	355, 436
PshAI	GACNNNNGTC	1 cut(s)	588
PsiI	TTATAA	1 cut(s)	726
Psp124BI	GAGCTC	1 cut(s)	81
Psp1406I	AACGTT	1 cut(s)	315
Psp5II	RGGWCCY	1 cut(s)	277
Psp6I	CCWGG	3 cut(s)	347, 1449, 1756
PspFI	CCCAGC	1 cut(s)	1160
PspGI	CCWGG	3 cut(s)	347, 1449, 1756
PspN4I	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
PspPI	GGNCC	2 cut(s)	277, 1062
PspPPI	RGGWCCY	1 cut(s)	277
PstNI	CAGNNNCTG	1 cut(s)	878
PsuI	RGATCY	1 cut(s)	1549
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	2 cut(s)	435, 494
RsaNI	GTAC	2 cut(s)	434, 493
RseI	CAYNNNNRTG	2 cut(s)	267, 1265
SacI	GAGCTC	1 cut(s)	81
SaqAI	TTAA	8 cut(s)	227, 273, 303, 312, 392, 1377, 1878, 1910
SatI	GCNGC	8 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479, 1896
Sau3AI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
Sau96I	GGNCC	2 cut(s)	277, 1062
SchI	GAGTC	4 cut(s)	82, 598, 951, 1639
ScrFI	CCNGG	3 cut(s)	349, 1451, 1758
SduI	GDGCHC	2 cut(s)	81, 518
SfaNI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1721
SfcI	CTRYAG	2 cut(s)	138, 1029
SfoI	GGCGCC	1 cut(s)	37
SinI	GGWCC	1 cut(s)	277
SmiMI	CAYNNNNRTG	2 cut(s)	267, 1265
SmlI	CTYRAG	3 cut(s)	83, 950, 1647
SmoI	CTYRAG	3 cut(s)	83, 950, 1647
SpeI	ACTAGT	1 cut(s)	1523
SseBI	AGGCCT	1 cut(s)	238
SsiI	CCGC	3 cut(s)	1050, 1354, 1896
SspDI	GGCGCC	1 cut(s)	35
SspI	AATATT	1 cut(s)	1123
SspMI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
SstI	GAGCTC	1 cut(s)	81
StuI	AGGCCT	1 cut(s)	238
StyD4I	CCNGG	3 cut(s)	347, 1449, 1756
StyI	CCWWGG	3 cut(s)	198, 418, 882
TaaI	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1776
TaiI	ACGT	4 cut(s)	294, 318, 494, 1802
TaqI	TCGA	2 cut(s)	175, 396
TatI	WGTACW	1 cut(s)	433
TauI	GCSGC	2 cut(s)	1052, 1898
TfiI	GAWTC	4 cut(s)	361, 904, 1483, 1889
Tru1I	TTAA	8 cut(s)	227, 273, 303, 312, 392, 1377, 1878, 1910
Tru9I	TTAA	8 cut(s)	227, 273, 303, 312, 392, 1377, 1878, 1910
TscAI	CASTG	4 cut(s)	542, 625, 1072, 1272
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	6 cut(s)	72, 377, 1046, 1192, 1421, 1478
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	8 cut(s)	107, 477, 690, 961, 989, 1409, 1449, 1470
TspGWI	ACGGA	1 cut(s)	1431
TspRI	CASTG	4 cut(s)	542, 625, 1072, 1272
VpaK11BI	GGWCC	1 cut(s)	277
XagI	CCTNNNNNAGG	1 cut(s)	422
XapI	RAATTY	4 cut(s)	230, 934, 1034, 1598
XbaI	TCTAGA	1 cut(s)	938
XceI	RCATGY	3 cut(s)	188, 359, 440
XcmI	CCANNNNNNNNNTGG	2 cut(s)	46, 915
XspI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.