Prupe.8G179800_v2.0.a1

Alpha-1,3-mannosyl-glycoprotein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18064871 .. 18070528
5658 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G179800.2

Sequence Viewer

Length: 1470 bp
ATGCCAGAAAGCCCATTTCTTCTTCTAGTCCAAAAAAAGGAAAAAGCAAAAAAATTGGACAGCGTCAGCGAGCAAGAACAGCCGGCGCAGATCGGAAGCTGCCGAAAATTTGTTGGCACCAAAAAGGAAACAAAAATGAAGAAAATTCTCTGCGATTTTCGGTTCCTCCTATTTCTCGCTGCTGCGGCGTTCATCTATATCCAGATGCGGCTTTTCGCGACGCAATCACAGTATGCTGATCGTCTTGCCGATGCGATAGAGTCGGAGGACCAATGTACATCTCAATTGAGAACACTAATTGATCAAATAAGCTTGCAACAAGGACAAATTGTTTCCCTAGAAGAAGAAAAGCAACGGCTAGAGCAAGAGTGTGGACAACTGAAGGTTCTTGTTCAAGAACTTGAAAGGAAAGGCCTAGGTAGGCTGATTGACAAAGAACAGGTGCCAGTGGCAGCAGTTGTAATTATGGCATGCAATCGTGCTGATTATCTGGAAAGAACTGTTAAGTCAGTTTTAAAATATCAGAGTTCTGTTGCTTCAAAGTTTCCTCTATTTGTCTCCCAGGATGGATCGCATCCAGCTGTCAAAGAGAAGGCTTTGAGCTACGATCAGCTTACCTATATGCAGCATTTGGATTATGAACCAGTTCATACTGAAAGACCTGGGGAGTTGATTGCGTACTACAAAATTGCACGTCATTACAAATGGGCATTGGATGGATTGTTCTACAAGCATAACTTCAGCCGAGTAATCATACTCGAAGATGATATGGAAATTGCTCCTGATTTTTTCGATTACTTTGAGTCGACAGCTGCTCTCCTTGACAAGGATAAGTCTATCATGGCTGTTTCCTCGTGGAATGACAACGGGCAAAAGCAGTTTGTGCATGATCCTAAAGTACTTTATAGGTCGGATTTCTTTCCTGGACTTGGGTGGATGCTGGCTAGATCCACATGGGATGAGCTATCACCAAAGTGGCCAAAGGCTTACTGGGATGATTGGTTGAGGTTAAAAGAGAATCATAAAGATCGACAATTTATTCGGCCAGAAGTTTGCAGAACATATAACTTTGGTGAACATGGTTCTAGTCTGGGGCAGTTTTTCAAACAATACCTTGAGCCAATCAAGCTGAATGATGTCCTGGTTGACTGGAAATCAATGGATTTGAACTACCTGATGGAGGACAAGTATATAAAGCACTTCGCTGATATTGTGAAAAAGGCAAAACCCATTCGTGGAACGGATCTTGTACTAAAGGCACGTAACATTGGTGGTGATGTTCGCATACAGTACAATGACCAGCCAGACTTTGAACGCATTGCACGTCAATTTGGTATTTTTGAAGAGTGGAAGGATGGTGTACCAAGGACAGCATATAAAGGAATAGTTGTTTTCCGATATCAAATCACACAACGTATATTCCTTGTTGGTCCAGGTTCTCTCGTGCAGCTTGGAGTTAGCGATTCTTGA

Protein Analysis

490

Amino Acids

56.83

Weight (kDa)

7.58

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 116, 442
AccI GTMKAC 1 cut(s) 806
AccII CGCG 1 cut(s) 218
AciI CCGC 2 cut(s) 185, 208
AclWI GGATC 4 cut(s) 577, 884, 942, 1251
AcoI YGGCCR 2 cut(s) 977, 1043
AcsI RAATTY 2 cut(s) 107, 144
AcuI CTGAAG 2 cut(s) 401, 724
AfaI GTAC 6 cut(s) 277, 680, 900, 1251, 1292, 1362
AfiI CCNNNNNNNGG 5 cut(s) 37, 826, 929, 1180, 1235
AgsI TTSAA 7 cut(s) 395, 404, 540, 1105, 1168, 1313, 1343
AjiI CACGTC 2 cut(s) 695, 1325
AjnI CCWGG 5 cut(s) 561, 661, 922, 1140, 1432
AleI CACNNNNGTG 1 cut(s) 973
AloI GAACNNNNNNTCC 2 cut(s) 707, 739
AluBI AGCT 9 cut(s) 99, 312, 581, 603, 613, 812, 964, 1129, 1450
AluI AGCT 9 cut(s) 99, 312, 581, 603, 613, 812, 964, 1129, 1450
Alw26I GTCTC 1 cut(s) 562
AlwI GGATC 4 cut(s) 577, 884, 942, 1251
AoxI GGCC 3 cut(s) 412, 977, 1043
ApeKI GCWGC 7 cut(s) 99, 179, 182, 452, 625, 812, 1447
ApoI RAATTY 2 cut(s) 107, 144
ArsI GACNNNNNNTTYG 2 cut(s) 1023, 1055
Asp700I GAANNNNTTC 1 cut(s) 645
AspA2I CCTAGG 1 cut(s) 415
AspLEI GCGC 1 cut(s) 88
AspS9I GGNCC 2 cut(s) 268, 1430
AsuHPI GGTGA 3 cut(s) 960, 1085, 1286
AvaII GGWCC 2 cut(s) 268, 1430
AvrII CCTAGG 1 cut(s) 415
BalI TGGCCA 1 cut(s) 979
BanI GGYRCC 2 cut(s) 116, 442
BauI CACGAG 2 cut(s) 853, 1442
BbvI GCAGC 7 cut(s) 86, 166, 169, 464, 637, 799, 1459
BccI CCATC 4 cut(s) 560, 710, 1171, 1349
BceAI ACGGC 1 cut(s) 371
BciT130I CCWGG 5 cut(s) 563, 663, 924, 1142, 1434
BclI TGATCA 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 562
BfaI CTAG 6 cut(s) 26, 338, 359, 416, 945, 1086
BisI GCNGC 9 cut(s) 100, 180, 183, 186, 209, 453, 626, 813, 1448
BlnI CCTAGG 1 cut(s) 415
BlsI GCNGC 9 cut(s) 101, 181, 184, 187, 210, 454, 627, 814, 1449
BmcAI AGTACT 1 cut(s) 900
Bme1390I CCNGG 5 cut(s) 563, 663, 924, 1142, 1434
Bme18I GGWCC 2 cut(s) 268, 1430
BmgBI CACGTC 2 cut(s) 695, 1325
BmgT120I GGNCC 2 cut(s) 268, 1430
BmiI GGNNCC 3 cut(s) 118, 164, 444
BmrFI CCNGG 5 cut(s) 563, 663, 924, 1142, 1434
BmrI ACTGGG 1 cut(s) 1000
BmsI GCATC 4 cut(s) 195, 241, 583, 927
BmuI ACTGGG 1 cut(s) 1000
BpuEI CTTGAG 1 cut(s) 1136
BsaAI YACGTR 1 cut(s) 1262
BsaJI CCNNGG 4 cut(s) 415, 561, 662, 1364
BsaXI ACNNNNNCTCC 2 cut(s) 1172, 1202
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 826, 929, 1180, 1235
Bse118I RCCGGY 1 cut(s) 82
Bse1I ACTGG 4 cut(s) 446, 644, 995, 1154
Bse3DI GCAATG 1 cut(s) 1317
BseBI CCWGG 5 cut(s) 563, 663, 924, 1142, 1434
BseDI CCNNGG 4 cut(s) 415, 561, 662, 1364
BseGI GGATG 7 cut(s) 571, 574, 721, 942, 964, 1000, 1360
BseLI CCNNNNNNNGG 5 cut(s) 37, 826, 929, 1180, 1235
BseMI GCAATG 1 cut(s) 1317
BseNI ACTGG 4 cut(s) 446, 644, 995, 1154
BseXI GCAGC 7 cut(s) 86, 166, 169, 464, 637, 799, 1459
BsgI GTGCAG 1 cut(s) 1466
Bsh1236I CGCG 1 cut(s) 218
BshFI GGCC 3 cut(s) 414, 979, 1045
BshNI GGYRCC 2 cut(s) 116, 442
BsiSI CCGG 1 cut(s) 83
BslI CCNNNNNNNGG 5 cut(s) 37, 826, 929, 1180, 1235
BsmAI GTCTC 1 cut(s) 562
BsnI GGCC 3 cut(s) 414, 979, 1045
Bsp1407I TGTACA 1 cut(s) 275
Bsp143I GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
Bsp68I TCGCGA 1 cut(s) 218
BspACI CCGC 2 cut(s) 185, 208
BspANI GGCC 3 cut(s) 414, 979, 1045
BspFNI CGCG 1 cut(s) 218
BspLI GGNNCC 3 cut(s) 118, 164, 444
BspPI GGATC 4 cut(s) 577, 884, 942, 1251
BspT107I GGYRCC 2 cut(s) 116, 442
BsrDI GCAATG 1 cut(s) 1317
BsrFI RCCGGY 1 cut(s) 82
BsrGI TGTACA 1 cut(s) 275
BsrI ACTGG 4 cut(s) 446, 644, 995, 1154
BssAI RCCGGY 1 cut(s) 82
BssECI CCNNGG 4 cut(s) 415, 561, 662, 1364
BssMI GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
BssSI CACGAG 2 cut(s) 853, 1442
BssT1I CCWWGG 2 cut(s) 415, 1364
Bst2BI CACGAG 2 cut(s) 853, 1442
Bst2UI CCWGG 5 cut(s) 563, 663, 924, 1142, 1434
Bst4CI ACNGT 3 cut(s) 231, 502, 1290
Bst6I CTCTTC 1 cut(s) 1338
BstAPI GCANNNNNTGC 1 cut(s) 883
BstAUI TGTACA 1 cut(s) 275
BstBAI YACGTR 1 cut(s) 1262
BstC8I GCNNGC 5 cut(s) 71, 84, 314, 472, 942
BstENI CCTNNNNNAGG 2 cut(s) 824, 1178
BstF5I GGATG 7 cut(s) 571, 574, 721, 942, 964, 1000, 1360
BstFNI CGCG 1 cut(s) 218
BstHHI GCGC 1 cut(s) 88
BstKTI GATC 9 cut(s) 93, 241, 304, 572, 610, 892, 950, 1030, 1246
BstMAI GTCTC 1 cut(s) 562
BstMBI GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
BstMWI GCNNNNNNNGC 4 cut(s) 79, 185, 883, 1126
BstNI CCWGG 5 cut(s) 563, 663, 924, 1142, 1434
BstNSI RCATGY 1 cut(s) 474
BstSCI CCNGG 5 cut(s) 561, 661, 922, 1140, 1432
BstUI CGCG 1 cut(s) 218
BstV1I GCAGC 7 cut(s) 86, 166, 169, 464, 637, 799, 1459
BstX2I RGATCY 2 cut(s) 947, 1243
BstYI RGATCY 2 cut(s) 947, 1243
BsuRI GGCC 3 cut(s) 414, 979, 1045
BtrI CACGTC 2 cut(s) 695, 1325
BtsCI GGATG 7 cut(s) 571, 574, 721, 942, 964, 1000, 1360
BtsIMutI CAGTG 1 cut(s) 453
BtuMI TCGCGA 1 cut(s) 218
Cac8I GCNNGC 5 cut(s) 71, 84, 314, 472, 942
CfoI GCGC 1 cut(s) 88
Cfr10I RCCGGY 1 cut(s) 82
Cfr13I GGNCC 2 cut(s) 268, 1430
CseI GACGC 2 cut(s) 52, 229
Csp6I GTAC 6 cut(s) 276, 679, 899, 1250, 1291, 1361
CviAII CATG 5 cut(s) 471, 841, 887, 954, 1079
CviQI GTAC 6 cut(s) 276, 679, 899, 1250, 1291, 1361
DpnI GATC 9 cut(s) 92, 240, 303, 571, 609, 891, 949, 1029, 1245
DpnII GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
DraI TTTAAA 1 cut(s) 516
EaeI YGGCCR 2 cut(s) 977, 1043
Eam1104I CTCTTC 1 cut(s) 1338
EarI CTCTTC 1 cut(s) 1338
Eco130I CCWWGG 2 cut(s) 415, 1364
Eco147I AGGCCT 1 cut(s) 414
Eco32I GATATC 1 cut(s) 1400
Eco47I GGWCC 2 cut(s) 268, 1430
Eco57I CTGAAG 2 cut(s) 401, 724
EcoNI CCTNNNNNAGG 2 cut(s) 824, 1178
EcoRII CCWGG 5 cut(s) 561, 661, 922, 1140, 1432
EcoRV GATATC 1 cut(s) 1400
EcoT14I CCWWGG 2 cut(s) 415, 1364
ErhI CCWWGG 2 cut(s) 415, 1364
FaeI CATG 5 cut(s) 474, 844, 890, 957, 1082
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FatI CATG 5 cut(s) 470, 840, 886, 953, 1078
FbaI TGATCA 1 cut(s) 301
FblI GTMKAC 1 cut(s) 806
Fnu4HI GCNGC 9 cut(s) 100, 180, 183, 186, 209, 453, 626, 813, 1448
FokI GGATG 7 cut(s) 561, 578, 728, 949, 971, 1007, 1367
Fsp4HI GCNGC 9 cut(s) 100, 180, 183, 186, 209, 453, 626, 813, 1448
FspBI CTAG 6 cut(s) 26, 338, 359, 416, 945, 1086
GlaI GCGC 1 cut(s) 87
GluI GCNGC 9 cut(s) 100, 180, 183, 186, 209, 453, 626, 813, 1448
HaeIII GGCC 3 cut(s) 414, 979, 1045
HapII CCGG 1 cut(s) 83
HgaI GACGC 2 cut(s) 52, 229
HhaI GCGC 1 cut(s) 88
Hin1II CATG 5 cut(s) 474, 844, 890, 957, 1082
Hin6I GCGC 1 cut(s) 86
HinP1I GCGC 1 cut(s) 86
HincII GTYRAC 2 cut(s) 807, 1147
HindII GTYRAC 2 cut(s) 807, 1147
HindIII AAGCTT 1 cut(s) 310
HinfI GANTC 4 cut(s) 260, 803, 1018, 1463
HpaII CCGG 1 cut(s) 83
HphI GGTGA 3 cut(s) 960, 1085, 1286
Hpy166II GTNNAC 5 cut(s) 374, 807, 1076, 1147, 1361
Hpy188I TCNGA 5 cut(s) 95, 265, 525, 913, 1397
Hpy188III TCNNGA 6 cut(s) 202, 217, 395, 491, 782, 1467
Hpy8I GTNNAC 5 cut(s) 374, 807, 1076, 1147, 1361
Hpy99I CGWCG 1 cut(s) 223
HpyAV CCTTC 3 cut(s) 376, 586, 1345
HpyCH4III ACNGT 3 cut(s) 231, 502, 1290
HpyCH4IV ACGT 4 cut(s) 694, 1261, 1324, 1414
HpyCH4V TGCA 8 cut(s) 316, 474, 625, 692, 886, 1056, 1322, 1447
HpyF10VI GCNNNNNNNGC 4 cut(s) 79, 185, 883, 1126
HpySE526I ACGT 4 cut(s) 694, 1261, 1324, 1414
Hsp92II CATG 5 cut(s) 474, 844, 890, 957, 1082
HspAI GCGC 1 cut(s) 86
KroI GCCGGC 1 cut(s) 82
KroNI GCCGGC 1 cut(s) 84
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
LmnI GCTCC 1 cut(s) 784
Lsp1109I GCAGC 7 cut(s) 86, 166, 169, 464, 637, 799, 1459
LweI GCATC 4 cut(s) 195, 241, 583, 927
MaeI CTAG 6 cut(s) 26, 338, 359, 416, 945, 1086
MaeII ACGT 4 cut(s) 694, 1261, 1324, 1414
MaeIII GTNAC 1 cut(s) 1262
MalI GATC 9 cut(s) 92, 240, 303, 571, 609, 891, 949, 1029, 1245
MboI GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
MboII GAAGA 7 cut(s) 11, 14, 151, 353, 356, 773, 1355
MfeI CAATTG 1 cut(s) 284
MflI RGATCY 2 cut(s) 947, 1243
MlsI TGGCCA 1 cut(s) 979
MluNI TGGCCA 1 cut(s) 979
MlyI GAGTC 2 cut(s) 269, 812
MmeI TCCRAC 2 cut(s) 243, 891
MnlI CCTC 6 cut(s) 176, 259, 558, 862, 999, 1174
Mox20I TGGCCA 1 cut(s) 979
MroNI GCCGGC 1 cut(s) 82
MroXI GAANNNNTTC 1 cut(s) 645
MscI TGGCCA 1 cut(s) 979
MseI TTAA 3 cut(s) 504, 515, 1010
MslI CAYNNNNRTG 1 cut(s) 973
Msp20I TGGCCA 1 cut(s) 979
MspA1I CMGCKG 2 cut(s) 581, 812
MspI CCGG 1 cut(s) 83
MspR9I CCNGG 5 cut(s) 563, 663, 924, 1142, 1434
MunI CAATTG 1 cut(s) 284
MvaI CCWGG 5 cut(s) 563, 663, 924, 1142, 1434
MvnI CGCG 1 cut(s) 218
MwoI GCNNNNNNNGC 4 cut(s) 79, 185, 883, 1126
NaeI GCCGGC 1 cut(s) 84
NdeII GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
NgoMIV GCCGGC 1 cut(s) 82
NlaIII CATG 5 cut(s) 474, 844, 890, 957, 1082
NlaIV GGNNCC 3 cut(s) 118, 164, 444
NmeAIII GCCGAG 1 cut(s) 770
NruI TCGCGA 1 cut(s) 218
NspI RCATGY 1 cut(s) 474
OliI CACNNNNGTG 1 cut(s) 973
PaeI GCATGC 1 cut(s) 474
PceI AGGCCT 1 cut(s) 414
PcsI WCGNNNNNNNCGW 1 cut(s) 1321
PdiI GCCGGC 1 cut(s) 84
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 2 cut(s) 1018, 1463
PflFI GACNNNGTC 1 cut(s) 62
PfoI TCCNGGA 1 cut(s) 922
PkrI GCNGC 9 cut(s) 101, 181, 184, 187, 210, 454, 627, 814, 1449
PleI GAGTC 2 cut(s) 268, 811
PpsI GAGTC 2 cut(s) 268, 811
Ppu21I YACGTR 1 cut(s) 1262
Psp6I CCWGG 5 cut(s) 561, 661, 922, 1140, 1432
PspGI CCWGG 5 cut(s) 561, 661, 922, 1140, 1432
PspN4I GGNNCC 3 cut(s) 118, 164, 444
PspPI GGNCC 2 cut(s) 268, 1430
PsuI RGATCY 2 cut(s) 947, 1243
PsyI GACNNNGTC 1 cut(s) 62
PvuII CAGCTG 2 cut(s) 581, 812
RruI TCGCGA 1 cut(s) 218
RsaI GTAC 6 cut(s) 277, 680, 900, 1251, 1292, 1362
RsaNI GTAC 6 cut(s) 276, 679, 899, 1250, 1291, 1361
RseI CAYNNNNRTG 1 cut(s) 973
SalI GTCGAC 1 cut(s) 805
SaqAI TTAA 3 cut(s) 504, 515, 1010
SatI GCNGC 9 cut(s) 100, 180, 183, 186, 209, 453, 626, 813, 1448
Sau3AI GATC 9 cut(s) 90, 238, 301, 569, 607, 889, 947, 1027, 1243
Sau96I GGNCC 2 cut(s) 268, 1430
ScaI AGTACT 1 cut(s) 900
SchI GAGTC 2 cut(s) 269, 812
ScrFI CCNGG 5 cut(s) 563, 663, 924, 1142, 1434
SfaNI GCATC 4 cut(s) 195, 241, 583, 927
SinI GGWCC 2 cut(s) 268, 1430
SmiMI CAYNNNNRTG 1 cut(s) 973
SmlI CTYRAG 1 cut(s) 1115
SmoI CTYRAG 1 cut(s) 1115
SphI GCATGC 1 cut(s) 474
SseBI AGGCCT 1 cut(s) 414
SsiI CCGC 2 cut(s) 185, 208
SspMI CTAG 6 cut(s) 26, 338, 359, 416, 945, 1086
StuI AGGCCT 1 cut(s) 414
StyD4I CCNGG 5 cut(s) 561, 661, 922, 1140, 1432
StyI CCWWGG 2 cut(s) 415, 1364
TaaI ACNGT 3 cut(s) 231, 502, 1290
TaiI ACGT 4 cut(s) 697, 1264, 1327, 1417
TaqI TCGA 4 cut(s) 759, 792, 806, 1030
TatI WGTACW 4 cut(s) 275, 898, 1249, 1290
TauI GCSGC 2 cut(s) 188, 211
TfiI GAWTC 2 cut(s) 1018, 1463
Tru1I TTAA 3 cut(s) 504, 515, 1010
Tru9I TTAA 3 cut(s) 504, 515, 1010
TscAI CASTG 1 cut(s) 453
TseI GCWGC 7 cut(s) 99, 179, 182, 452, 625, 812, 1447
TspDTI ATGAA 4 cut(s) 152, 181, 638, 654
TspGWI ACGGA 1 cut(s) 1256
TspRI CASTG 1 cut(s) 453
Tth111I GACNNNGTC 1 cut(s) 62
VpaK11BI GGWCC 2 cut(s) 268, 1430
XagI CCTNNNNNAGG 2 cut(s) 824, 1178
XapI RAATTY 2 cut(s) 107, 144
XceI RCATGY 1 cut(s) 474
XcmI CCANNNNNNNNNTGG 1 cut(s) 987
XmaJI CCTAGG 1 cut(s) 415
XmiI GTMKAC 1 cut(s) 806
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 6 cut(s) 26, 338, 359, 416, 945, 1086
ZrmI AGTACT 1 cut(s) 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.