Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003514

Physical Location & Seq

Genomic Coordinates Reverse (-)

18421293 .. 18424976

Gene Structure 3684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G187400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGATGAAGACTTACCCTTTAAAACTTTTTGGTTCACATGCTTGCTCTCCTCTTCCCACTTGCATTCAGATTTATCACAAGGACCCAACAAGGTGGAGGTTCTTTAGCTGCAGTTTCCTTTGTACTATTGCTATGCTTTCTGCAGTTTTCTTCTTTGGGAGCCATTGTGTTCTCACTGATTATAAAGAGAAGTTTTTAGCATGGGGATTGGTTGATGATATGCAACTTACAATATCCAAGAAGTGTGAGACTCAATGCAGGCCTGATGGAACTGAGGCACTACCTAAAGGGATTGTTTCCAAGACCTCTGACTTGCTAATGCAACCATTATGGGGACCCCGAAATAAAAAGAACTCAAAGTCATCTACAAACTTATTGGCCATTGCAGTTGGAATAAAGCAAAAGGAAAGTGTGAACAAGATTGTAAAGAAGTTCCTCTTAAGTGATTTCATTGTGATGCTTTTTCATTATGATGGTCTTGTAAATGAGTGGAGGGATTTGGAATGGAGTGGTCGTGCCATACATGTGTCTGCTATGAATCAAACCAAGTGGTGGTATGCAAAGCGTTTCCTACATCCAGATATTGTTTCTGAATATGCATTCATTTTCCTCTGGGATGAGGACCTTGGAATTGAAAATTTCAATGTTGGAAGATACTTATCAATTATTAGAAAAGAGGGGCTTGAGATATCACAGCCAGCACTTGATCCTGAGAACTCAGAGGTCCATCATGATCTTACAGCAAGAGACAACAGAACAGAAGTACACAGGAAGATAAACAAGCTAATTGGTGGTGGAAGGAGGTGTGATCAAAACAGCACAGATCCGCCATGCACAGGGTTTGTAGAAATGATGGCTCCTGTTTTTTCAAGAGCATCCTGGCGCTGTGTGTGGCATATGATTCAGAATGACTTAGTTCATGCATGGGGCTTGGATTTCCAGCTTGGTTATTGTGCACAGGGTGATCGAACGAAAAATATCGGAATCGTTGATTCTGAGTACATTGTTCATTATGGTCTTCCAACACTGGGGGGTTTGGCACCAAACAAGACAAATGCAGAAGCACCTGATCAATCTGCTAAAACTATAAGCTTGCCTAGTTCAGAACAACCGGCACCGACATCGTCATCTCCATTGGACCCTAGAACTGAGGTAAGGAAGCTATCCTTTGTTGAACTGGAAATTTTCAAGAACAGATGGAAAAAGGCAGTTAGAGAAGATAATTGCTGGGATCCATACCAAAAGACACCACAACAGAGTAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF707

Protein Analysis

423

Amino Acids

48.23

Weight (kDa)

8.49

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12840 AT4G12840 AT4G12840
fragaria_vesca	FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17510 FvH4_2g17530 FvH4_2g17530 FvH4_2g17530 FvH4_2g17530 FvH4_2g17530
malus_domestica	MD05G1154100.v1.1 MD10G1148400.v1.1
prunus_persica	Prupe.8G187400_v2.0.a1 Prupe.8G187400_v2.0.a1 Prupe.8G187400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0282241
rosa_laevigata	RLG00000012898
rosa_multiflora	Rmu_sc0014549.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186370
rosa_rugosa	Rorug02G0256100 Rorug03G0287100 Rorug03G0287200 Rorug06G0146600 Rorug07G0302200
rosa_samantha	Rh6AG259700 Rh6BG263000 Rh6CG261900 Rh6DG253900
rosa_wichuraiana	Rw6G022470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	183
AccB1I	GGYRCC	2 cut(s)	1039, 1114
AccB7I	CCANNNNNTGG	1 cut(s)	552
AciI	CCGC	1 cut(s)	827
AclWI	GGATC	4 cut(s)	701, 818, 1226, 1239
AcoI	YGGCCR	1 cut(s)	378
AcsI	RAATTY	2 cut(s)	637, 1182
AdeI	CACNNNGTG	1 cut(s)	962
AfaI	GTAC	3 cut(s)	124, 765, 1001
AfiI	CCNNNNNNNGG	4 cut(s)	332, 552, 836, 1028
AflII	CTTAAG	1 cut(s)	439
AflIII	ACRYGT	1 cut(s)	523
AgsI	TTSAA	5 cut(s)	635, 643, 870, 1175, 1189
AjnI	CCWGG	1 cut(s)	878
AluBI	AGCT	5 cut(s)	108, 784, 943, 1092, 1162
AluI	AGCT	5 cut(s)	108, 784, 943, 1092, 1162
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	2 cut(s)	242, 741
Alw44I	GTGCAC	1 cut(s)	954
AlwI	GGATC	4 cut(s)	701, 818, 1226, 1239
AoxI	GGCC	2 cut(s)	260, 378
ApaLI	GTGCAC	1 cut(s)	954
ApeKI	GCWGC	1 cut(s)	108
ApoI	RAATTY	2 cut(s)	637, 1182
AspLEI	GCGC	1 cut(s)	885
AspS9I	GGNCC	5 cut(s)	82, 335, 622, 724, 1138
AsuHPI	GGTGA	1 cut(s)	974
AvaII	GGWCC	5 cut(s)	82, 335, 622, 724, 1138
BaeGI	GKGCMC	1 cut(s)	958
BalI	TGGCCA	1 cut(s)	380
BamHI	GGATCC	1 cut(s)	1231
BanI	GGYRCC	2 cut(s)	1039, 1114
BbsI	GAAGAC	2 cut(s)	14, 1010
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	1 cut(s)	95
BccI	CCATC	5 cut(s)	260, 467, 735, 847, 1191
BcgI	CGANNNNNNTGC	2 cut(s)	1104, 1138
BciT130I	CCWGG	1 cut(s)	880
BclI	TGATCA	2 cut(s)	808, 1069
BcoDI	GTCTC	2 cut(s)	242, 741
BfaI	CTAG	3 cut(s)	1098, 1143, 1267
BfmI	CTRYAG	2 cut(s)	109, 141
BfoI	RGCGCY	1 cut(s)	886
BfrI	CTTAAG	1 cut(s)	439
BisI	GCNGC	1 cut(s)	109
BlsI	GCNGC	1 cut(s)	110
Bme1390I	CCNGG	1 cut(s)	880
Bme18I	GGWCC	5 cut(s)	82, 335, 622, 724, 1138
BmgT120I	GGNCC	5 cut(s)	82, 335, 622, 724, 1138
BmiI	GGNNCC	9 cut(s)	84, 161, 336, 337, 858, 1041, 1116, 1140, 1233
BmrFI	CCNGG	1 cut(s)	880
BmrI	ACTGGG	1 cut(s)	1037
BmsI	GCATC	2 cut(s)	447, 884
BmuI	ACTGGG	1 cut(s)	1037
BpiI	GAAGAC	2 cut(s)	14, 1010
BpuEI	CTTGAG	1 cut(s)	704
BsaBI	GATNNNNATC	1 cut(s)	658
BsaJI	CCNNGG	1 cut(s)	625
BsaXI	ACNNNNNCTCC	4 cut(s)	151, 181, 499, 529
Bsc4I	CCNNNNNNNGG	4 cut(s)	332, 552, 836, 1028
Bse118I	RCCGGY	1 cut(s)	1111
Bse1I	ACTGG	2 cut(s)	1032, 1182
Bse3DI	GCAATG	1 cut(s)	381
Bse8I	GATNNNNATC	1 cut(s)	658
BseBI	CCWGG	1 cut(s)	880
BseDI	CCNNGG	1 cut(s)	625
BseGI	GGATG	3 cut(s)	574, 622, 875
BseJI	GATNNNNATC	1 cut(s)	658
BseLI	CCNNNNNNNGG	4 cut(s)	332, 552, 836, 1028
BseMI	GCAATG	1 cut(s)	381
BseMII	CTCAG	5 cut(s)	264, 702, 732, 987, 1140
BseNI	ACTGG	2 cut(s)	1032, 1182
BseRI	GAGGAG	1 cut(s)	39
BseSI	GKGCMC	1 cut(s)	958
BseXI	GCAGC	1 cut(s)	95
BseYI	CCCAGC	1 cut(s)	1227
BshFI	GGCC	2 cut(s)	262, 380
BshNI	GGYRCC	2 cut(s)	1039, 1114
BsiHKAI	GWGCWC	1 cut(s)	958
BsiSI	CCGG	1 cut(s)	1112
BslFI	GGGAC	1 cut(s)	348
BslI	CCNNNNNNNGG	4 cut(s)	332, 552, 836, 1028
BsmAI	GTCTC	2 cut(s)	242, 741
BsmFI	GGGAC	1 cut(s)	348
BsmI	GAATGC	2 cut(s)	63, 599
BsnI	GGCC	2 cut(s)	262, 380
Bsp1286I	GDGCHC	1 cut(s)	958
Bsp143I	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
BspACI	CCGC	1 cut(s)	827
BspANI	GGCC	2 cut(s)	262, 380
BspCNI	CTCAG	5 cut(s)	265, 703, 731, 988, 1141
BspHI	TCATGA	1 cut(s)	730
BspLI	GGNNCC	9 cut(s)	84, 161, 336, 337, 858, 1041, 1116, 1140, 1233
BspMAI	CTGCAG	2 cut(s)	113, 145
BspPI	GGATC	4 cut(s)	701, 818, 1226, 1239
BspT107I	GGYRCC	2 cut(s)	1039, 1114
BspTI	CTTAAG	1 cut(s)	439
BsrDI	GCAATG	1 cut(s)	381
BsrFI	RCCGGY	1 cut(s)	1111
BsrI	ACTGG	2 cut(s)	1032, 1182
BssAI	RCCGGY	1 cut(s)	1111
BssECI	CCNNGG	1 cut(s)	625
BssMI	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
BssT1I	CCWWGG	1 cut(s)	625
Bst2UI	CCWGG	1 cut(s)	880
Bst6I	CTCTTC	1 cut(s)	57
BstAFI	CTTAAG	1 cut(s)	439
BstC8I	GCNNGC	4 cut(s)	43, 260, 699, 1094
BstDEI	CTNAG	6 cut(s)	273, 711, 718, 913, 996, 1149
BstF5I	GGATG	3 cut(s)	574, 622, 875
BstH2I	RGCGCY	1 cut(s)	886
BstHHI	GCGC	1 cut(s)	885
BstKTI	GATC	7 cut(s)	709, 736, 811, 826, 967, 1072, 1234
BstMAI	GTCTC	2 cut(s)	242, 741
BstMBI	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
BstNI	CCWGG	1 cut(s)	880
BstNSI	RCATGY	2 cut(s)	41, 527
BstSCI	CCNGG	1 cut(s)	878
BstSFI	CTRYAG	2 cut(s)	109, 141
BstSLI	GKGCMC	1 cut(s)	958
BstV1I	GCAGC	1 cut(s)	95
BstV2I	GAAGAC	2 cut(s)	14, 1010
BstX2I	RGATCY	2 cut(s)	823, 1231
BstXI	CCANNNNNNTGG	1 cut(s)	93
BstYI	RGATCY	2 cut(s)	823, 1231
BsuRI	GGCC	2 cut(s)	262, 380
BtsCI	GGATG	3 cut(s)	574, 622, 875
BtsIMutI	CAGTG	2 cut(s)	174, 1025
Cac8I	GCNNGC	4 cut(s)	43, 260, 699, 1094
CciI	TCATGA	1 cut(s)	730
CfoI	GCGC	1 cut(s)	885
Cfr10I	RCCGGY	1 cut(s)	1111
Cfr13I	GGNCC	5 cut(s)	82, 335, 622, 724, 1138
Csp6I	GTAC	3 cut(s)	123, 764, 1000
CspCI	CAANNNNNGTGG	2 cut(s)	530, 565
CviAII	CATG	7 cut(s)	38, 201, 524, 731, 831, 920, 924
CviQI	GTAC	3 cut(s)	123, 764, 1000
DdeI	CTNAG	6 cut(s)	273, 711, 718, 913, 996, 1149
DpnI	GATC	7 cut(s)	708, 735, 810, 825, 966, 1071, 1233
DpnII	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
DraI	TTTAAA	1 cut(s)	21
DraIII	CACNNNGTG	1 cut(s)	962
EaeI	YGGCCR	1 cut(s)	378
Eam1104I	CTCTTC	1 cut(s)	57
EarI	CTCTTC	1 cut(s)	57
EciI	GGCGGA	1 cut(s)	816
Eco130I	CCWWGG	1 cut(s)	625
Eco147I	AGGCCT	1 cut(s)	262
Eco32I	GATATC	1 cut(s)	690
Eco47I	GGWCC	5 cut(s)	82, 335, 622, 724, 1138
EcoO109I	RGGNCCY	3 cut(s)	82, 335, 622
EcoRII	CCWGG	1 cut(s)	878
EcoRV	GATATC	1 cut(s)	690
EcoT14I	CCWWGG	1 cut(s)	625
EcoT22I	ATGCAT	2 cut(s)	601, 925
ErhI	CCWWGG	1 cut(s)	625
FaeI	CATG	7 cut(s)	41, 204, 527, 734, 834, 923, 927
FalI	AAGNNNNNCTT	6 cut(s)	422, 454, 666, 698, 1151, 1183
FaqI	GGGAC	1 cut(s)	348
FatI	CATG	7 cut(s)	37, 200, 523, 730, 830, 919, 923
FauNDI	CATATG	1 cut(s)	897
FbaI	TGATCA	2 cut(s)	808, 1069
Fnu4HI	GCNGC	1 cut(s)	109
FokI	GGATG	3 cut(s)	561, 629, 862
Fsp4HI	GCNGC	1 cut(s)	109
FspBI	CTAG	3 cut(s)	1098, 1143, 1267
GlaI	GCGC	1 cut(s)	884
GluI	GCNGC	1 cut(s)	109
GsaI	CCCAGC	1 cut(s)	1231
HaeII	RGCGCY	1 cut(s)	886
HaeIII	GGCC	2 cut(s)	262, 380
HapII	CCGG	1 cut(s)	1112
HhaI	GCGC	1 cut(s)	885
Hin1II	CATG	7 cut(s)	41, 204, 527, 734, 834, 923, 927
Hin6I	GCGC	1 cut(s)	883
HinP1I	GCGC	1 cut(s)	883
HindIII	AAGCTT	1 cut(s)	1090
HinfI	GANTC	5 cut(s)	250, 538, 901, 984, 992
HpaII	CCGG	1 cut(s)	1112
HphI	GGTGA	1 cut(s)	974
Hpy166II	GTNNAC	4 cut(s)	35, 415, 766, 956
Hpy188I	TCNGA	8 cut(s)	69, 310, 592, 721, 906, 983, 997, 1105
Hpy188III	TCNNGA	5 cut(s)	578, 710, 731, 870, 1189
Hpy8I	GTNNAC	4 cut(s)	35, 415, 766, 956
HpyAV	CCTTC	1 cut(s)	792
HpyF3I	CTNAG	6 cut(s)	273, 711, 718, 913, 996, 1149
Hsp92II	CATG	7 cut(s)	41, 204, 527, 734, 834, 923, 927
HspAI	GCGC	1 cut(s)	883
KflI	GGGWCCC	1 cut(s)	335
Ksp22I	TGATCA	2 cut(s)	808, 1069
Kzo9I	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
LmnI	GCTCC	2 cut(s)	159, 862
Lsp1109I	GCAGC	1 cut(s)	95
LweI	GCATC	2 cut(s)	447, 884
MaeI	CTAG	3 cut(s)	1098, 1143, 1267
MalI	GATC	7 cut(s)	708, 735, 810, 825, 966, 1071, 1233
MboI	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
MboII	GAAGA	7 cut(s)	19, 44, 142, 663, 784, 1010, 1229
MflI	RGATCY	2 cut(s)	823, 1231
MhlI	GDGCHC	1 cut(s)	958
MlsI	TGGCCA	1 cut(s)	380
MluCI	AATT	6 cut(s)	630, 637, 663, 786, 1182, 1222
MluNI	TGGCCA	1 cut(s)	380
MlyI	GAGTC	1 cut(s)	244
MmeI	TCCRAC	3 cut(s)	370, 628, 1046
Mox20I	TGGCCA	1 cut(s)	380
Mph1103I	ATGCAT	2 cut(s)	601, 925
MscI	TGGCCA	1 cut(s)	380
MseI	TTAA	2 cut(s)	20, 440
MslI	CAYNNNNRTG	3 cut(s)	455, 471, 524
Msp20I	TGGCCA	1 cut(s)	380
MspCI	CTTAAG	1 cut(s)	439
MspI	CCGG	1 cut(s)	1112
MspR9I	CCNGG	1 cut(s)	880
Mva1269I	GAATGC	2 cut(s)	63, 599
MvaI	CCWGG	1 cut(s)	880
NdeI	CATATG	1 cut(s)	897
NdeII	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
NlaIII	CATG	7 cut(s)	41, 204, 527, 734, 834, 923, 927
NlaIV	GGNNCC	9 cut(s)	84, 161, 336, 337, 858, 1041, 1116, 1140, 1233
NsiI	ATGCAT	2 cut(s)	601, 925
NspI	RCATGY	2 cut(s)	41, 527
PagI	TCATGA	1 cut(s)	730
PceI	AGGCCT	1 cut(s)	262
PciI	ACATGT	1 cut(s)	523
PctI	GAATGC	2 cut(s)	63, 599
PfeI	GAWTC	4 cut(s)	538, 901, 984, 992
PflFI	GACNNNGTC	1 cut(s)	1123
PflMI	CCANNNNNTGG	1 cut(s)	552
PkrI	GCNGC	1 cut(s)	110
PleI	GAGTC	1 cut(s)	244
PpsI	GAGTC	1 cut(s)	244
PpuMI	RGGWCCY	3 cut(s)	82, 335, 622
PscI	ACATGT	1 cut(s)	523
PsiI	TTATAA	1 cut(s)	183
Psp5II	RGGWCCY	3 cut(s)	82, 335, 622
Psp6I	CCWGG	1 cut(s)	878
PspFI	CCCAGC	1 cut(s)	1227
PspGI	CCWGG	1 cut(s)	878
PspN4I	GGNNCC	9 cut(s)	84, 161, 336, 337, 858, 1041, 1116, 1140, 1233
PspPI	GGNCC	5 cut(s)	82, 335, 622, 724, 1138
PspPPI	RGGWCCY	3 cut(s)	82, 335, 622
PstI	CTGCAG	2 cut(s)	113, 145
PsuI	RGATCY	2 cut(s)	823, 1231
PsyI	GACNNNGTC	1 cut(s)	1123
RsaI	GTAC	3 cut(s)	124, 765, 1001
RsaNI	GTAC	3 cut(s)	123, 764, 1000
RseI	CAYNNNNRTG	3 cut(s)	455, 471, 524
SaqAI	TTAA	2 cut(s)	20, 440
SatI	GCNGC	1 cut(s)	109
Sau3AI	GATC	7 cut(s)	706, 733, 808, 823, 964, 1069, 1231
Sau96I	GGNCC	5 cut(s)	82, 335, 622, 724, 1138
SchI	GAGTC	1 cut(s)	244
ScrFI	CCNGG	1 cut(s)	880
SduI	GDGCHC	1 cut(s)	958
SfaNI	GCATC	2 cut(s)	447, 884
SfcI	CTRYAG	2 cut(s)	109, 141
SinI	GGWCC	5 cut(s)	82, 335, 622, 724, 1138
SmiMI	CAYNNNNRTG	3 cut(s)	455, 471, 524
SmlI	CTYRAG	2 cut(s)	439, 683
SmoI	CTYRAG	2 cut(s)	439, 683
Sse9I	AATT	6 cut(s)	630, 637, 663, 786, 1182, 1222
SseBI	AGGCCT	1 cut(s)	262
SsiI	CCGC	1 cut(s)	827
SspMI	CTAG	3 cut(s)	1098, 1143, 1267
StuI	AGGCCT	1 cut(s)	262
StyD4I	CCNGG	1 cut(s)	878
StyI	CCWWGG	1 cut(s)	625
TaqI	TCGA	1 cut(s)	967
TasI	AATT	6 cut(s)	630, 637, 663, 786, 1182, 1222
TatI	WGTACW	3 cut(s)	122, 763, 999
TfiI	GAWTC	4 cut(s)	538, 901, 984, 992
Tru1I	TTAA	2 cut(s)	20, 440
Tru9I	TTAA	2 cut(s)	20, 440
TscAI	CASTG	2 cut(s)	181, 1032
TseI	GCWGC	1 cut(s)	108
TspDTI	ATGAA	7 cut(s)	20, 439, 455, 551, 592, 908, 998
TspRI	CASTG	2 cut(s)	181, 1032
Tth111I	GACNNNGTC	1 cut(s)	1123
Van91I	CCANNNNNTGG	1 cut(s)	552
Vha464I	CTTAAG	1 cut(s)	439
VneI	GTGCAC	1 cut(s)	954
VpaK11BI	GGWCC	5 cut(s)	82, 335, 622, 724, 1138
XapI	RAATTY	2 cut(s)	637, 1182
XceI	RCATGY	2 cut(s)	41, 527
XspI	CTAG	3 cut(s)	1098, 1143, 1267
Zsp2I	ATGCAT	2 cut(s)	601, 925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.