Prupe.8G188900_v2.0.a1

Adrenodoxin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0013130
Physical Location & Seq
Reverse (-)
18480983 .. 18483146
2164 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G188900.2

Sequence Viewer

Length: 612 bp
ATGAAACTTGGTGATTCTGTCCCTTCTTCTTATACAATGCATAAGCTACAGAAAATTCATGCTTCCACTCAGTCATCACAGTCGACAGCCAAAAGCGTCCCCAAACCTGAAACAAGCAAAATGGCGATGGCGAGCCTTCAGAGACTTCGTCACTCCCAAATCCACCACCGCCTGCCTTCTCTCTCCTTCATCTCCAGATCCTCCGCCTCATCTGCATCCCCATCCCCATCCTCGCCCACCCACTCGGCAAAAGTCTCCGATCGAATTGTGAAGCTCTTCGCGATCGACGTCGACGGGCGCAAGCGCGAGGTGGTGGGCCTATCGGGCCACACTCTGCTCCGGGCCCTAGCCCAAGGCGGCCTGATCGACCCGGCCTCCCACCGGCTCGAGGATATCGACGCCTGCTCGGCCGAATGCGAGGTCAATATCGCGCAGGAATGGTTCGAAAAGCTCCCACCACGGTCCTACGACGAAGAGTACGTGCTCAAGAGGAACTCTAGGGCTAGGGTTCTCAACAAGCACTCCAGGCTCGGATGCCAGGTCGTCCTCACTCCTGAGCTTCAAGGTATGGTCGTCGCTGTTCCCGAGCCCAAACCCTGGGACATCCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

204

Amino Acids

22.35

Weight (kDa)

9.48

Isoelectric Point (pI)

72.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013130)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07480
fragaria_vesca FvH4_2g17650
malus_domestica MD10G1150500.v1.1
prunus_persica Prupe.8G188900_v2.0.a1 Prupe.8G188900_v2.0.a1
pyrus_communis pycom05g14940
rosa_chinensis RchiOBHm_Chr6g0282621
rosa_laevigata RLG00000012881
rosa_multiflora Rmu_co8059372.1_g000001 Rmu_sc0000283.1_g000001 Rmu_sc0005697.1_g000001
rosa_roxburghii Rroxscaffold_7G00186220
rosa_rugosa Rorug06G0148000
rosa_samantha Rh6AG261200 Rh6BG264400 Rh6CG263500 Rh6DG255500
rosa_wichuraiana Rw6G022590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 291
AccB7I CCANNNNNTGG 1 cut(s) 597
AccI GTMKAC 2 cut(s) 83, 291
AccII CGCG 3 cut(s) 281, 306, 431
AciI CCGC 3 cut(s) 169, 204, 357
AclWI GGATC 1 cut(s) 192
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 1 cut(s) 54
AcuI CTGAAG 1 cut(s) 122
AcyI GRCGYC 2 cut(s) 288, 399
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 3 cut(s) 381, 388, 597
AgsI TTSAA 1 cut(s) 563
AjnI CCWGG 3 cut(s) 524, 537, 596
AluBI AGCT 4 cut(s) 46, 274, 451, 559
AluI AGCT 4 cut(s) 46, 274, 451, 559
Alw21I GWGCWC 1 cut(s) 486
Alw26I GTCTC 2 cut(s) 136, 259
AlwI GGATC 1 cut(s) 192
Ama87I CYCGRG 2 cut(s) 386, 584
AoxI GGCC 6 cut(s) 316, 325, 342, 358, 372, 408
ApaI GGGCCC 1 cut(s) 346
ApoI RAATTY 1 cut(s) 54
ArsI GACNNNNNNTTYG 2 cut(s) 405, 437
Asp700I GAANNNNTTC 1 cut(s) 275
AspLEI GCGC 3 cut(s) 300, 306, 433
AspS9I GGNCC 5 cut(s) 316, 325, 342, 343, 462
AsuC2I CCSGG 2 cut(s) 341, 371
AsuHPI GGTGA 1 cut(s) 23
AsuII TTCGAA 1 cut(s) 444
AvaI CYCGRG 2 cut(s) 386, 584
AvaII GGWCC 1 cut(s) 462
BaeGI GKGCMC 1 cut(s) 346
BanII GRGCYC 2 cut(s) 346, 591
Bbv12I GWGCWC 1 cut(s) 486
BccI CCATC 3 cut(s) 121, 229, 235
BciT130I CCWGG 3 cut(s) 526, 539, 598
BcnI CCSGG 2 cut(s) 341, 371
BcoDI GTCTC 2 cut(s) 136, 259
BfaI CTAG 3 cut(s) 347, 498, 504
BfmI CTRYAG 1 cut(s) 47
BglI GCCNNNNNGGC 2 cut(s) 324, 407
BisI GCNGC 1 cut(s) 358
BlsI GCNGC 1 cut(s) 359
Bme1390I CCNGG 5 cut(s) 341, 371, 526, 539, 598
Bme18I GGWCC 1 cut(s) 462
BmeT110I CYCGRG 2 cut(s) 386, 584
BmgT120I GGNCC 5 cut(s) 316, 325, 342, 343, 462
BmiI GGNNCC 1 cut(s) 344
BmrFI CCNGG 5 cut(s) 341, 371, 526, 539, 598
BmsI GCATC 2 cut(s) 224, 524
BpmI CTGGAG 2 cut(s) 178, 508
Bpu10I CCTNAGC 1 cut(s) 555
Bpu14I TTCGAA 1 cut(s) 444
BpuEI CTTGAG 1 cut(s) 470
BpuMI CCSGG 2 cut(s) 341, 371
BsaAI YACGTR 1 cut(s) 481
BsaHI GRCGYC 2 cut(s) 288, 399
BsaJI CCNNGG 4 cut(s) 352, 458, 596, 597
BsaXI ACNNNNNCTCC 4 cut(s) 359, 389, 506, 536
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 388, 597
Bse118I RCCGGY 1 cut(s) 381
BseBI CCWGG 3 cut(s) 526, 539, 598
BseDI CCNNGG 4 cut(s) 352, 458, 596, 597
BseGI GGATG 5 cut(s) 215, 221, 227, 539, 603
BseLI CCNNNNNNNGG 3 cut(s) 381, 388, 597
BseMII CTCAG 2 cut(s) 83, 546
BseSI GKGCMC 1 cut(s) 346
BseX3I CGGCCG 1 cut(s) 408
Bsh1236I CGCG 3 cut(s) 281, 306, 431
Bsh1285I CGRYCG 3 cut(s) 262, 285, 411
BshFI GGCC 6 cut(s) 318, 327, 344, 360, 374, 410
BsiEI CGRYCG 3 cut(s) 262, 285, 411
BsiHKAI GWGCWC 1 cut(s) 486
BsiHKCI CYCGRG 2 cut(s) 386, 584
BsiSI CCGG 3 cut(s) 340, 371, 382
BslFI GGGAC 2 cut(s) 5, 83
BslI CCNNNNNNNGG 3 cut(s) 381, 388, 597
BsmAI GTCTC 2 cut(s) 136, 259
BsmFI GGGAC 2 cut(s) 5, 83
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 6 cut(s) 318, 327, 344, 360, 374, 410
BsoBI CYCGRG 2 cut(s) 386, 584
Bsp119I TTCGAA 1 cut(s) 444
Bsp120I GGGCCC 1 cut(s) 342
Bsp1286I GDGCHC 3 cut(s) 346, 486, 591
Bsp143I GATC 4 cut(s) 197, 259, 282, 363
Bsp68I TCGCGA 1 cut(s) 281
BspACI CCGC 3 cut(s) 169, 204, 357
BspANI GGCC 6 cut(s) 318, 327, 344, 360, 374, 410
BspCNI CTCAG 2 cut(s) 82, 547
BspFNI CGCG 3 cut(s) 281, 306, 431
BspLI GGNNCC 1 cut(s) 344
BspPI GGATC 1 cut(s) 192
BspQI GCTCTTC 1 cut(s) 281
BspT104I TTCGAA 1 cut(s) 444
BsrFI RCCGGY 1 cut(s) 381
BssAI RCCGGY 1 cut(s) 381
BssECI CCNNGG 4 cut(s) 352, 458, 596, 597
BssMI GATC 4 cut(s) 197, 259, 282, 363
BssNI GRCGYC 2 cut(s) 288, 399
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 3 cut(s) 526, 539, 598
Bst4CI ACNGT 2 cut(s) 81, 462
Bst6I CTCTTC 2 cut(s) 281, 468
BstACI GRCGYC 2 cut(s) 288, 399
BstBAI YACGTR 1 cut(s) 481
BstBI TTCGAA 1 cut(s) 444
BstC8I GCNNGC 4 cut(s) 133, 173, 302, 403
BstDEI CTNAG 2 cut(s) 69, 555
BstDSI CCRYGG 1 cut(s) 458
BstF5I GGATG 5 cut(s) 215, 221, 227, 539, 603
BstFNI CGCG 3 cut(s) 281, 306, 431
BstHHI GCGC 3 cut(s) 300, 306, 433
BstKTI GATC 4 cut(s) 200, 262, 285, 366
BstMAI GTCTC 2 cut(s) 136, 259
BstMBI GATC 4 cut(s) 197, 259, 282, 363
BstMCI CGRYCG 3 cut(s) 262, 285, 411
BstMWI GCNNNNNNNGC 4 cut(s) 212, 324, 407, 526
BstNI CCWGG 3 cut(s) 526, 539, 598
BstSCI CCNGG 5 cut(s) 339, 369, 524, 537, 596
BstSFI CTRYAG 1 cut(s) 47
BstSLI GKGCMC 1 cut(s) 346
BstUI CGCG 3 cut(s) 281, 306, 431
BstX2I RGATCY 1 cut(s) 197
BstYI RGATCY 1 cut(s) 197
BstZI CGGCCG 1 cut(s) 408
BsuRI GGCC 6 cut(s) 318, 327, 344, 360, 374, 410
BtgI CCRYGG 1 cut(s) 458
BtgZI GCGATG 1 cut(s) 140
BtsCI GGATG 5 cut(s) 215, 221, 227, 539, 603
BtuMI TCGCGA 1 cut(s) 281
Cac8I GCNNGC 4 cut(s) 133, 173, 302, 403
CfoI GCGC 3 cut(s) 300, 306, 433
Cfr10I RCCGGY 1 cut(s) 381
Cfr13I GGNCC 5 cut(s) 316, 325, 342, 343, 462
CseI GACGC 2 cut(s) 85, 407
Csp6I GTAC 1 cut(s) 478
CviAII CATG 1 cut(s) 59
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 2 cut(s) 69, 555
DpnI GATC 4 cut(s) 199, 261, 284, 365
DpnII GATC 4 cut(s) 197, 259, 282, 363
EaeI YGGCCR 1 cut(s) 408
EagI CGGCCG 1 cut(s) 408
Eam1104I CTCTTC 2 cut(s) 281, 468
EarI CTCTTC 2 cut(s) 281, 468
EciI GGCGGA 1 cut(s) 193
EclXI CGGCCG 1 cut(s) 408
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 346, 591
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 1 cut(s) 462
Eco52I CGGCCG 1 cut(s) 408
Eco57I CTGAAG 1 cut(s) 122
Eco88I CYCGRG 2 cut(s) 386, 584
EcoO109I RGGNCCY 1 cut(s) 343
EcoRII CCWGG 3 cut(s) 524, 537, 596
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 1 cut(s) 352
EcoT22I ATGCAT 1 cut(s) 42
EcoT38I GRGCYC 2 cut(s) 346, 591
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 1 cut(s) 62
FaiI YATR 5 cut(s) 33, 42, 60, 569, 610
FaqI GGGAC 2 cut(s) 5, 83
FatI CATG 1 cut(s) 58
FblI GTMKAC 2 cut(s) 83, 291
Fnu4HI GCNGC 1 cut(s) 358
FokI GGATG 5 cut(s) 202, 208, 214, 546, 590
FriOI GRGCYC 2 cut(s) 346, 591
Fsp4HI GCNGC 1 cut(s) 358
FspBI CTAG 3 cut(s) 347, 498, 504
GlaI GCGC 3 cut(s) 299, 305, 432
GluI GCNGC 1 cut(s) 358
GsuI CTGGAG 2 cut(s) 178, 508
HaeIII GGCC 6 cut(s) 318, 327, 344, 360, 374, 410
HapII CCGG 3 cut(s) 340, 371, 382
HgaI GACGC 2 cut(s) 85, 407
HhaI GCGC 3 cut(s) 300, 306, 433
Hin1I GRCGYC 2 cut(s) 288, 399
Hin1II CATG 1 cut(s) 62
Hin6I GCGC 3 cut(s) 298, 304, 431
HinP1I GCGC 3 cut(s) 298, 304, 431
HincII GTYRAC 2 cut(s) 84, 292
HindII GTYRAC 2 cut(s) 84, 292
HinfI GANTC 1 cut(s) 14
HpaII CCGG 3 cut(s) 340, 371, 382
HphI GGTGA 1 cut(s) 23
Hpy166II GTNNAC 2 cut(s) 84, 292
Hpy188I TCNGA 3 cut(s) 141, 259, 533
Hpy188III TCNNGA 5 cut(s) 195, 280, 487, 554, 584
Hpy8I GTNNAC 2 cut(s) 84, 292
Hpy99I CGWCG 6 cut(s) 290, 293, 296, 401, 473, 578
HpyAV CCTTC 4 cut(s) 33, 146, 186, 196
HpyCH4III ACNGT 2 cut(s) 81, 462
HpyCH4IV ACGT 2 cut(s) 288, 480
HpyCH4V TGCA 2 cut(s) 40, 215
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 324, 407, 526
HpyF3I CTNAG 2 cut(s) 69, 555
HpySE526I ACGT 2 cut(s) 288, 480
Hsp92I GRCGYC 2 cut(s) 288, 399
Hsp92II CATG 1 cut(s) 62
HspAI GCGC 3 cut(s) 298, 304, 431
Kzo9I GATC 4 cut(s) 197, 259, 282, 363
LguI GCTCTTC 1 cut(s) 281
LmnI GCTCC 2 cut(s) 342, 456
LweI GCATC 2 cut(s) 224, 524
MaeI CTAG 3 cut(s) 347, 498, 504
MaeII ACGT 2 cut(s) 288, 480
MaeIII GTNAC 1 cut(s) 149
MalI GATC 4 cut(s) 199, 261, 284, 365
MboI GATC 4 cut(s) 197, 259, 282, 363
MboII GAAGA 3 cut(s) 18, 268, 485
MflI RGATCY 1 cut(s) 197
MhlI GDGCHC 3 cut(s) 346, 486, 591
MluCI AATT 2 cut(s) 54, 264
MnlI CCTC 9 cut(s) 211, 217, 241, 301, 382, 385, 412, 483, 557
Mph1103I ATGCAT 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 275
MspI CCGG 3 cut(s) 340, 371, 382
MspR9I CCNGG 5 cut(s) 341, 371, 526, 539, 598
Mva1269I GAATGC 1 cut(s) 419
MvaI CCWGG 3 cut(s) 526, 539, 598
MvnI CGCG 3 cut(s) 281, 306, 431
MwoI GCNNNNNNNGC 4 cut(s) 212, 324, 407, 526
NciI CCSGG 2 cut(s) 341, 371
NdeII GATC 4 cut(s) 197, 259, 282, 363
NlaIII CATG 1 cut(s) 62
NlaIV GGNNCC 1 cut(s) 344
NmeAIII GCCGAG 2 cut(s) 224, 386
NmuCI GTSAC 1 cut(s) 149
NruI TCGCGA 1 cut(s) 281
NsiI ATGCAT 1 cut(s) 42
NspV TTCGAA 1 cut(s) 444
PaeR7I CTCGAG 1 cut(s) 386
PasI CCCWGGG 1 cut(s) 597
PciSI GCTCTTC 1 cut(s) 281
PcsI WCGNNNNNNNCGW 4 cut(s) 285, 393, 477, 582
PctI GAATGC 1 cut(s) 419
PdmI GAANNNNTTC 1 cut(s) 275
PfeI GAWTC 1 cut(s) 14
PflFI GACNNNGTC 1 cut(s) 147
PflMI CCANNNNNTGG 1 cut(s) 597
PkrI GCNGC 1 cut(s) 359
Ple19I CGATCG 2 cut(s) 262, 285
Ppu21I YACGTR 1 cut(s) 481
Psp6I CCWGG 3 cut(s) 524, 537, 596
PspGI CCWGG 3 cut(s) 524, 537, 596
PspN4I GGNNCC 1 cut(s) 344
PspOMI GGGCCC 1 cut(s) 342
PspPI GGNCC 5 cut(s) 316, 325, 342, 343, 462
PspXI VCTCGAGB 1 cut(s) 386
PsuI RGATCY 1 cut(s) 197
PsyI GACNNNGTC 1 cut(s) 147
PvuI CGATCG 2 cut(s) 262, 285
RruI TCGCGA 1 cut(s) 281
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
SalI GTCGAC 2 cut(s) 82, 290
SapI GCTCTTC 1 cut(s) 281
SatI GCNGC 1 cut(s) 358
Sau3AI GATC 4 cut(s) 197, 259, 282, 363
Sau96I GGNCC 5 cut(s) 316, 325, 342, 343, 462
ScrFI CCNGG 5 cut(s) 341, 371, 526, 539, 598
SduI GDGCHC 3 cut(s) 346, 486, 591
SfaNI GCATC 2 cut(s) 224, 524
SfcI CTRYAG 1 cut(s) 47
SfiI GGCCNNNNNGGCC 1 cut(s) 324
Sfr274I CTCGAG 1 cut(s) 386
SfuI TTCGAA 1 cut(s) 444
SgrDI CGTCGACG 1 cut(s) 290
SinI GGWCC 1 cut(s) 462
SlaI CTCGAG 1 cut(s) 386
SmlI CTYRAG 2 cut(s) 386, 485
SmoI CTYRAG 2 cut(s) 386, 485
Sse9I AATT 2 cut(s) 54, 264
SsiI CCGC 3 cut(s) 169, 204, 357
SspMI CTAG 3 cut(s) 347, 498, 504
StyD4I CCNGG 5 cut(s) 339, 369, 524, 537, 596
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 81, 462
TaiI ACGT 2 cut(s) 291, 483
TaqI TCGA 8 cut(s) 83, 262, 285, 291, 366, 387, 396, 444
TasI AATT 2 cut(s) 54, 264
TauI GCSGC 1 cut(s) 360
TfiI GAWTC 1 cut(s) 14
TseFI GTSAC 1 cut(s) 149
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 3 cut(s) 17, 47, 178
Tth111I GACNNNGTC 1 cut(s) 147
Van91I CCANNNNNTGG 1 cut(s) 597
VpaK11BI GGWCC 1 cut(s) 462
XapI RAATTY 1 cut(s) 54
XhoI CTCGAG 1 cut(s) 386
XmiI GTMKAC 2 cut(s) 83, 291
XmnI GAANNNNTTC 1 cut(s) 275
XspI CTAG 3 cut(s) 347, 498, 504
ZraI GACGTC 1 cut(s) 289
Zsp2I ATGCAT 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.