Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010787

Physical Location & Seq

Genomic Coordinates Forward (+)

20991186 .. 20993923

Gene Structure 2738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G238300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGATCAATTTTTTGACTTTTTGGGGGCTTAGAATCATTTGGTTAGAGCAAGTTATGCTGAGGAATAGATCTAGAGCAGTGACCAGCAAGCAAGCTTTGATGGCTGACCACACCTCCCAATCATCTCCAACTCAAAAAAACTACACCAAAGCCCCATCTTTCTTTGGTTCTCCAAGATTCAGAGCTTTCACAATAAAGGGTCATTCTGAAACTGATTCTCTGATAAGCCCAACTTCAATTCTTGACAGCAAGCCATTTCCTTTTGCAACCCCATTTTCATATGATCAAAACCAACCCAAAACCCCAAAAGTTGTATCAGCAAACAAAAGCTCCTGGCACCAACCAGAGCCCAAAGGCATTGGCCTTGCTCTGCTTGAGACACTCAATGATGAAAAGCTTGAAGACAATGCTTCTAAACCCAACAGCGGGAAGGTCCTGTTTGGAACTAAGCTTAGAGTTCAAATCCCTCTCTTTCCAGCCTCTGCTCTTTCTCCAACTCAGTCTCCGAAATCTCCAGCTGATTTCAAGATCAAGATTCGGAATTCCCAATCATCAGCAATTGGGTCTGCTATCTCTGGCATCCAAACAGAGCATTCAAATTCTGCTCAGGCTCCCACAGGGTGTGCCTCTGTGAGTGAAATGGAGCTTTCTGAAGATTATACATGTGTGATATCTCGTGGACCAAATCCAAGAACAACCCACATATTTGATAACTGCATTGTAGAAAGCTTCTATAGCTTATCGGATCAGTCCAGCTCTGCCTCGGTGAGTTTCCTTAGCTTCTGTTACACGTGCAAGAAGAATCTTGAGCAGAAAAACGACATCTACATTTACAGAGGTGAGAAAGCTTTCTGCAGTCGTGAATGCCGCTACCAAGAAATGCTCTTAGATGAAGTTGGGAACTCAGAGTTTGATGATGCTATAAGGACTTGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000932 GO:0001101 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0010033 GO:0010154 GO:0010162 GO:0010431 GO:0010494 GO:0021700 GO:0022414 GO:0022611 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033993 GO:0035770 GO:0036464 GO:0042221 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0071695 GO:0097305 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-FLZ

Protein Analysis

313

Amino Acids

34.66

Weight (kDa)

8.35

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63210
fragaria_vesca	FvH4_2g23270 FvH4_2g23270 FvH4_2g23270
malus_domestica	MD03G1262000.v1.1 MD11G1282700.v1.1
prunus_persica	Prupe.8G238300_v2.0.a1
pyrus_communis	pycom11g25040
rosa_chinensis	RchiOBHm_Chr6g0290641
rosa_laevigata	RLG00000012188
rosa_multiflora	Rmu_sc0006791.1_g000009
rosa_roxburghii	Rroxscaffold_7G00176850
rosa_rugosa	Rorug06G0213800 Rorug06G0213900 Rorug06G0213900 Rorug06G0214000
rosa_samantha	Rh6AG324400 Rh6BG331900 Rh6DG325100
rosa_wichuraiana	Rw6G028160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	336
AciI	CCGC	2 cut(s)	426, 868
AclWI	GGATC	1 cut(s)	753
AcsI	RAATTY	2 cut(s)	541, 598
AcuI	CTGAAG	1 cut(s)	672
AcvI	CACGTG	1 cut(s)	792
AdeI	CACNNNGTG	1 cut(s)	621
AfiI	CCNNNNNNNGG	2 cut(s)	425, 426
AflIII	ACRYGT	2 cut(s)	662, 789
AgsI	TTSAA	5 cut(s)	237, 401, 461, 526, 597
AjnI	CCWGG	1 cut(s)	332
Alw26I	GTCTC	2 cut(s)	371, 507
AlwI	GGATC	1 cut(s)	753
AlwNI	CAGNNNCTG	1 cut(s)	482
AoxI	GGCC	1 cut(s)	361
ApoI	RAATTY	2 cut(s)	541, 598
Asp700I	GAANNNNTTC	1 cut(s)	848
AspS9I	GGNCC	2 cut(s)	433, 680
AsuHPI	GGTGA	2 cut(s)	778, 851
AvaII	GGWCC	2 cut(s)	433, 680
BanI	GGYRCC	1 cut(s)	336
BanII	GRGCYC	1 cut(s)	351
BauI	CACGAG	1 cut(s)	675
BbrPI	CACGTG	1 cut(s)	792
BbsI	GAAGAC	1 cut(s)	408
BbvCI	CCTCAGC	1 cut(s)	59
BccI	CCATC	2 cut(s)	94, 163
BciT130I	CCWGG	1 cut(s)	334
BclI	TGATCA	2 cut(s)	3, 283
BcoDI	GTCTC	2 cut(s)	371, 507
BfaI	CTAG	1 cut(s)	72
BfmI	CTRYAG	2 cut(s)	733, 853
BglII	AGATCT	1 cut(s)	68
BisI	GCNGC	1 cut(s)	868
BlsI	GCNGC	1 cut(s)	869
Bme1390I	CCNGG	1 cut(s)	334
Bme18I	GGWCC	2 cut(s)	433, 680
BmgT120I	GGNCC	2 cut(s)	433, 680
BmiI	GGNNCC	2 cut(s)	338, 612
BmrFI	CCNGG	1 cut(s)	334
BmsI	GCATC	2 cut(s)	588, 907
BpiI	GAAGAC	1 cut(s)	408
BpmI	CTGGAG	1 cut(s)	498
Bpu10I	CCTNAGC	3 cut(s)	59, 606, 776
BpuEI	CTTGAG	2 cut(s)	395, 827
BsaAI	YACGTR	1 cut(s)	792
BsaJI	CCNNGG	1 cut(s)	762
BsaXI	ACNNNNNCTCC	6 cut(s)	98, 128, 314, 344, 487, 517
Bsc4I	CCNNNNNNNGG	2 cut(s)	425, 426
BseBI	CCWGG	1 cut(s)	334
BseDI	CCNNGG	1 cut(s)	762
BseGI	GGATG	1 cut(s)	579
BseLI	CCNNNNNNNGG	2 cut(s)	425, 426
BseMII	CTCAG	4 cut(s)	50, 512, 620, 918
BshFI	GGCC	1 cut(s)	363
BshNI	GGYRCC	1 cut(s)	336
BslI	CCNNNNNNNGG	2 cut(s)	425, 426
BsmAI	GTCTC	2 cut(s)	371, 507
BsmI	GAATGC	2 cut(s)	592, 869
BsnI	GGCC	1 cut(s)	363
Bsp1286I	GDGCHC	1 cut(s)	351
Bsp143I	GATC	5 cut(s)	3, 68, 283, 528, 745
BspACI	CCGC	2 cut(s)	426, 868
BspANI	GGCC	1 cut(s)	363
BspCNI	CTCAG	4 cut(s)	51, 511, 619, 917
BspLI	GGNNCC	2 cut(s)	338, 612
BspMAI	CTGCAG	1 cut(s)	857
BspPI	GGATC	1 cut(s)	753
BspT107I	GGYRCC	1 cut(s)	336
BssECI	CCNNGG	1 cut(s)	762
BssMI	GATC	5 cut(s)	3, 68, 283, 528, 745
BssSI	CACGAG	1 cut(s)	675
Bst2BI	CACGAG	1 cut(s)	675
Bst2UI	CCWGG	1 cut(s)	334
BstAPI	GCANNNNNTGC	1 cut(s)	55
BstBAI	YACGTR	1 cut(s)	792
BstC8I	GCNNGC	3 cut(s)	89, 93, 251
BstDEI	CTNAG	9 cut(s)	29, 59, 447, 452, 498, 606, 776, 886, 904
BstF5I	GGATG	1 cut(s)	579
BstKTI	GATC	5 cut(s)	6, 71, 286, 531, 748
BstMAI	GTCTC	2 cut(s)	371, 507
BstMBI	GATC	5 cut(s)	3, 68, 283, 528, 745
BstMWI	GCNNNNNNNGC	3 cut(s)	55, 101, 735
BstNI	CCWGG	1 cut(s)	334
BstNSI	RCATGY	1 cut(s)	666
BstSCI	CCNGG	1 cut(s)	332
BstSFI	CTRYAG	2 cut(s)	733, 853
BstV2I	GAAGAC	1 cut(s)	408
BstX2I	RGATCY	1 cut(s)	68
BstYI	RGATCY	1 cut(s)	68
BsuRI	GGCC	1 cut(s)	363
BtsCI	GGATG	1 cut(s)	579
BtsI	GCAGTG	1 cut(s)	84
BtsIMutI	CAGTG	1 cut(s)	84
Cac8I	GCNNGC	3 cut(s)	89, 93, 251
CaiI	CAGNNNCTG	1 cut(s)	482
Cfr13I	GGNCC	2 cut(s)	433, 680
CviAII	CATG	1 cut(s)	663
DdeI	CTNAG	9 cut(s)	29, 59, 447, 452, 498, 606, 776, 886, 904
DpnI	GATC	5 cut(s)	5, 70, 285, 530, 747
DpnII	GATC	5 cut(s)	3, 68, 283, 528, 745
DraIII	CACNNNGTG	1 cut(s)	621
Eco24I	GRGCYC	1 cut(s)	351
Eco32I	GATATC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	433, 680
Eco57I	CTGAAG	1 cut(s)	672
Eco72I	CACGTG	1 cut(s)	792
EcoO109I	RGGNCCY	1 cut(s)	433
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	1 cut(s)	332
EcoRV	GATATC	1 cut(s)	672
EcoT38I	GRGCYC	1 cut(s)	351
FaeI	CATG	1 cut(s)	666
FaiI	YATR	8 cut(s)	56, 280, 282, 660, 664, 704, 735, 923
FalI	AAGNNNNNCTT	2 cut(s)	217, 249
FatI	CATG	1 cut(s)	662
FauI	CCCGC	1 cut(s)	419
FauNDI	CATATG	1 cut(s)	280
FbaI	TGATCA	2 cut(s)	3, 283
Fnu4HI	GCNGC	1 cut(s)	868
FokI	GGATG	1 cut(s)	566
FriOI	GRGCYC	1 cut(s)	351
Fsp4HI	GCNGC	1 cut(s)	868
FspBI	CTAG	1 cut(s)	72
GluI	GCNGC	1 cut(s)	868
GsuI	CTGGAG	1 cut(s)	498
HaeIII	GGCC	1 cut(s)	363
Hin1II	CATG	1 cut(s)	666
HindIII	AAGCTT	5 cut(s)	93, 395, 449, 727, 846
HinfI	GANTC	5 cut(s)	33, 177, 215, 535, 802
HphI	GGTGA	2 cut(s)	778, 851
Hpy166II	GTNNAC	1 cut(s)	680
Hpy188I	TCNGA	8 cut(s)	182, 208, 222, 507, 540, 652, 745, 907
Hpy188III	TCNNGA	7 cut(s)	72, 242, 526, 532, 806, 860, 936
Hpy8I	GTNNAC	1 cut(s)	680
HpyAV	CCTTC	1 cut(s)	424
HpyCH4IV	ACGT	1 cut(s)	791
HpyCH4V	TGCA	4 cut(s)	266, 717, 795, 855
HpyF10VI	GCNNNNNNNGC	3 cut(s)	55, 101, 735
HpyF3I	CTNAG	9 cut(s)	29, 59, 447, 452, 498, 606, 776, 886, 904
HpySE526I	ACGT	1 cut(s)	791
Hsp92II	CATG	1 cut(s)	666
Ksp22I	TGATCA	2 cut(s)	3, 283
Kzo9I	GATC	5 cut(s)	3, 68, 283, 528, 745
LmnI	GCTCC	3 cut(s)	335, 616, 643
LweI	GCATC	2 cut(s)	588, 907
MaeI	CTAG	1 cut(s)	72
MaeII	ACGT	1 cut(s)	791
MaeIII	GTNAC	2 cut(s)	79, 785
MalI	GATC	5 cut(s)	5, 70, 285, 530, 747
MboI	GATC	5 cut(s)	3, 68, 283, 528, 745
MboII	GAAGA	3 cut(s)	413, 665, 811
MfeI	CAATTG	1 cut(s)	558
MflI	RGATCY	1 cut(s)	68
MhlI	GDGCHC	1 cut(s)	351
MluCI	AATT	5 cut(s)	7, 237, 541, 558, 598
MmeI	TCCRAC	2 cut(s)	152, 518
MnlI	CCTC	7 cut(s)	54, 124, 477, 490, 637, 772, 830
MroXI	GAANNNNTTC	1 cut(s)	848
MspA1I	CMGCKG	2 cut(s)	426, 518
MspR9I	CCNGG	1 cut(s)	334
MunI	CAATTG	1 cut(s)	558
Mva1269I	GAATGC	2 cut(s)	592, 869
MvaI	CCWGG	1 cut(s)	334
MwoI	GCNNNNNNNGC	3 cut(s)	55, 101, 735
NdeI	CATATG	1 cut(s)	280
NdeII	GATC	5 cut(s)	3, 68, 283, 528, 745
NlaIII	CATG	1 cut(s)	666
NlaIV	GGNNCC	2 cut(s)	338, 612
NmuCI	GTSAC	1 cut(s)	79
NspI	RCATGY	1 cut(s)	666
PciI	ACATGT	1 cut(s)	662
PctI	GAATGC	2 cut(s)	592, 869
PdmI	GAANNNNTTC	1 cut(s)	848
PfeI	GAWTC	5 cut(s)	33, 177, 215, 535, 802
PkrI	GCNGC	1 cut(s)	869
PmaCI	CACGTG	1 cut(s)	792
PmlI	CACGTG	1 cut(s)	792
Ppu21I	YACGTR	1 cut(s)	792
PpuMI	RGGWCCY	1 cut(s)	433
PscI	ACATGT	1 cut(s)	662
Psp5II	RGGWCCY	1 cut(s)	433
Psp6I	CCWGG	1 cut(s)	332
PspCI	CACGTG	1 cut(s)	792
PspGI	CCWGG	1 cut(s)	332
PspN4I	GGNNCC	2 cut(s)	338, 612
PspPI	GGNCC	2 cut(s)	433, 680
PspPPI	RGGWCCY	1 cut(s)	433
PstI	CTGCAG	1 cut(s)	857
PstNI	CAGNNNCTG	1 cut(s)	482
PsuI	RGATCY	1 cut(s)	68
PvuII	CAGCTG	1 cut(s)	518
SatI	GCNGC	1 cut(s)	868
Sau3AI	GATC	5 cut(s)	3, 68, 283, 528, 745
Sau96I	GGNCC	2 cut(s)	433, 680
ScrFI	CCNGG	1 cut(s)	334
SduI	GDGCHC	1 cut(s)	351
SfaNI	GCATC	2 cut(s)	588, 907
SfcI	CTRYAG	2 cut(s)	733, 853
SinI	GGWCC	2 cut(s)	433, 680
SmlI	CTYRAG	2 cut(s)	374, 806
SmoI	CTYRAG	2 cut(s)	374, 806
Sse9I	AATT	5 cut(s)	7, 237, 541, 558, 598
SsiI	CCGC	2 cut(s)	426, 868
SspMI	CTAG	1 cut(s)	72
StyD4I	CCNGG	1 cut(s)	332
TaiI	ACGT	1 cut(s)	794
TasI	AATT	5 cut(s)	7, 237, 541, 558, 598
TauI	GCSGC	1 cut(s)	870
TfiI	GAWTC	5 cut(s)	33, 177, 215, 535, 802
TscAI	CASTG	1 cut(s)	84
TseFI	GTSAC	1 cut(s)	79
Tsp45I	GTSAC	1 cut(s)	79
TspDTI	ATGAA	3 cut(s)	267, 405, 906
TspRI	CASTG	1 cut(s)	84
VpaK11BI	GGWCC	2 cut(s)	433, 680
XapI	RAATTY	2 cut(s)	541, 598
XbaI	TCTAGA	1 cut(s)	71
XceI	RCATGY	1 cut(s)	666
XmnI	GAANNNNTTC	1 cut(s)	848
XspI	CTAG	1 cut(s)	72

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.