Prupe.8G239300_v2.0.a1

Plant protein of unknown function (DUF868)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21041987 .. 21043487
1501 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G239300.1

Sequence Viewer

Length: 912 bp
ATGATGAGGGACTTTCCTTCTTGTTTTGGTGAAAATGGTGTTCAAGTTGCTGATTCTTCTTCTTCATCGTCATCAAGAATCACAAAAATTGCTCAGAACTTGGTTTCTTGTGTCTACCAGTGTAAATTACAGGGTCGTTTGTGTTTTATTACCGTGACATGGACCAAAAATTTGATGGGTCAAGGCCTAAGCATTGAAATTGACGATGCAGCCAATCAGTGCATCTGCAAGGTTGATATCAAGCCATGGTTGTTCTCCAAGAGAAAAGGGTGCAGGAATTTAGAGGTGGACACCAGTAAAATTGATATATATTGGGACTTAACCAATGCTAAGTTTGGTTCAGGACCTGAGCCATTAGAGAAGTTCTATTTAGCTGTTATGTTTAACCAAGAAATGGTTCTTTTTCTTGGGGACTTGAAGAGAGAAGCTTTCAACAAAGACCCTGTTGGTTCCATTTCCAGAGCCACTTTCATTGCCAAAAGAGAGCACATTTTTGGGAAGAAATTTTATGGCGCAAAGGCTCAGTTTTGTGATAAGGGGAAGAGCCATGATGTGACAATTGAATGTGAGACTGTTGGGCTCCATGAGCCATACCTTGTGATCTGCATTGACAGTAAGATGGTGATGCAGGTGAAGAGGTTGAATTGGAAGTTCAGAGGCAACCACACCATTTTGGTTGATGGGCTGAGAATTGAAGTGTTTTGGGATGTTCACAATTGGCTCTTTGGCAATGCTATGGGCAATGCAGTTTTCATGTTCCAAACTTGCCTCAGTGATGACAACAAGTTCTGGACCAGTCCACCAGTTTTGGATTCTTCTGTGTTGGCTTGGTCTTCCTCTCAGCCATTAAGAGATAACCAGTTGCAGGGTCTTGGCTTTTCACTGGTTTTGCATGCTTGGAAGAATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

304

Amino Acids

34.4

Weight (kDa)

8.24

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 619
Acc36I ACCTGC 1 cut(s) 619
AccB7I CCANNNNNTGG 1 cut(s) 394
AccI GTMKAC 1 cut(s) 114
AcsI RAATTY 3 cut(s) 169, 277, 503
AfiI CCNNNNNNNGG 3 cut(s) 159, 394, 865
AgsI TTSAA 7 cut(s) 44, 197, 418, 433, 563, 643, 695
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
AluBI AGCT 2 cut(s) 374, 428
AluI AGCT 2 cut(s) 374, 428
Alw21I GWGCWC 1 cut(s) 489
Alw26I GTCTC 1 cut(s) 563
AlwNI CAGNNNCTG 1 cut(s) 347
AoxI GGCC 1 cut(s) 184
ApeKI GCWGC 1 cut(s) 209
ApoI RAATTY 3 cut(s) 169, 277, 503
ArsI GACNNNNNNTTYG 2 cut(s) 154, 186
Asp700I GAANNNNTTC 1 cut(s) 396
AspLEI GCGC 1 cut(s) 515
AspS9I GGNCC 3 cut(s) 162, 344, 792
AsuHPI GGTGA 3 cut(s) 41, 634, 643
AvaII GGWCC 3 cut(s) 162, 344, 792
BanII GRGCYC 1 cut(s) 582
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 1 cut(s) 489
BbvI GCAGC 1 cut(s) 221
BccI CCATC 3 cut(s) 169, 613, 674
BcoDI GTCTC 1 cut(s) 563
BfuAI ACCTGC 1 cut(s) 619
BisI GCNGC 1 cut(s) 210
BlsI GCNGC 1 cut(s) 211
Bme18I GGWCC 3 cut(s) 162, 344, 792
BmgT120I GGNCC 3 cut(s) 162, 344, 792
BmiI GGNNCC 2 cut(s) 451, 581
BmsI GCATC 3 cut(s) 196, 231, 615
BpiI GAAGAC 1 cut(s) 825
Bpu10I CCTNAGC 2 cut(s) 188, 348
BsaJI CCNNGG 1 cut(s) 245
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 394, 865
Bse1I ACTGG 6 cut(s) 118, 294, 795, 803, 859, 888
Bse3DI GCAATG 3 cut(s) 471, 736, 748
BseDI CCNNGG 1 cut(s) 245
BseGI GGATG 1 cut(s) 712
BseLI CCNNNNNNNGG 3 cut(s) 159, 394, 865
BseMI GCAATG 3 cut(s) 471, 736, 748
BseMII CTCAG 6 cut(s) 107, 339, 536, 677, 784, 854
BseNI ACTGG 6 cut(s) 118, 294, 795, 803, 859, 888
BseXI GCAGC 1 cut(s) 221
BsgI GTGCAG 1 cut(s) 292
BshFI GGCC 1 cut(s) 186
BsiHKAI GWGCWC 1 cut(s) 489
BslFI GGGAC 3 cut(s) 23, 329, 425
BslI CCNNNNNNNGG 3 cut(s) 159, 394, 865
BsmAI GTCTC 1 cut(s) 563
BsmFI GGGAC 3 cut(s) 23, 329, 425
BsnI GGCC 1 cut(s) 186
Bsp1286I GDGCHC 2 cut(s) 489, 582
Bsp143I GATC 1 cut(s) 600
Bsp19I CCATGG 1 cut(s) 245
BspANI GGCC 1 cut(s) 186
BspCNI CTCAG 6 cut(s) 106, 340, 535, 678, 783, 853
BspLI GGNNCC 2 cut(s) 451, 581
BspMI ACCTGC 1 cut(s) 619
BspQI GCTCTTC 1 cut(s) 536
BsrDI GCAATG 3 cut(s) 471, 736, 748
BsrI ACTGG 6 cut(s) 118, 294, 795, 803, 859, 888
BssECI CCNNGG 1 cut(s) 245
BssMI GATC 1 cut(s) 600
BssT1I CCWWGG 1 cut(s) 245
Bst4CI ACNGT 3 cut(s) 154, 574, 614
Bst6I CTCTTC 3 cut(s) 413, 536, 629
BstC8I GCNNGC 1 cut(s) 894
BstDEI CTNAG 8 cut(s) 93, 188, 330, 348, 522, 686, 770, 840
BstDSI CCRYGG 1 cut(s) 245
BstF5I GGATG 1 cut(s) 712
BstHHI GCGC 1 cut(s) 515
BstKTI GATC 1 cut(s) 603
BstMAI GTCTC 1 cut(s) 563
BstMBI GATC 1 cut(s) 600
BstMWI GCNNNNNNNGC 1 cut(s) 586
BstNSI RCATGY 1 cut(s) 896
BstV1I GCAGC 1 cut(s) 221
BstV2I GAAGAC 1 cut(s) 825
BsuRI GGCC 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 245
BtsCI GGATG 1 cut(s) 712
BtsIMutI CAGTG 4 cut(s) 125, 224, 778, 881
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 1 cut(s) 894
CaiI CAGNNNCTG 1 cut(s) 347
CfoI GCGC 1 cut(s) 515
Cfr13I GGNCC 3 cut(s) 162, 344, 792
CspCI CAANNNNNGTGG 4 cut(s) 454, 489, 789, 824
CviAII CATG 6 cut(s) 159, 246, 548, 584, 754, 893
DdeI CTNAG 8 cut(s) 93, 188, 330, 348, 522, 686, 770, 840
DpnI GATC 1 cut(s) 602
DpnII GATC 1 cut(s) 600
Eam1104I CTCTTC 3 cut(s) 413, 536, 629
EarI CTCTTC 3 cut(s) 413, 536, 629
Eco130I CCWWGG 1 cut(s) 245
Eco147I AGGCCT 1 cut(s) 186
Eco24I GRGCYC 1 cut(s) 582
Eco32I GATATC 1 cut(s) 238
Eco47I GGWCC 3 cut(s) 162, 344, 792
EcoO109I RGGNCCY 1 cut(s) 344
EcoRV GATATC 1 cut(s) 238
EcoT14I CCWWGG 1 cut(s) 245
EcoT38I GRGCYC 1 cut(s) 582
ErhI CCWWGG 1 cut(s) 245
FaeI CATG 6 cut(s) 162, 249, 551, 587, 757, 896
FaqI GGGAC 3 cut(s) 23, 329, 425
FatI CATG 6 cut(s) 158, 245, 547, 583, 753, 892
FblI GTMKAC 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 210
FokI GGATG 1 cut(s) 719
FriOI GRGCYC 1 cut(s) 582
Fsp4HI GCNGC 1 cut(s) 210
GlaI GCGC 1 cut(s) 514
GluI GCNGC 1 cut(s) 210
HaeIII GGCC 1 cut(s) 186
HhaI GCGC 1 cut(s) 515
Hin1II CATG 6 cut(s) 162, 249, 551, 587, 757, 896
Hin6I GCGC 1 cut(s) 513
HinP1I GCGC 1 cut(s) 513
HindIII AAGCTT 1 cut(s) 426
HinfI GANTC 3 cut(s) 53, 78, 812
HphI GGTGA 3 cut(s) 41, 634, 643
Hpy166II GTNNAC 4 cut(s) 115, 289, 712, 800
Hpy188I TCNGA 2 cut(s) 96, 656
Hpy188III TCNNGA 4 cut(s) 75, 342, 459, 790
Hpy8I GTNNAC 4 cut(s) 115, 289, 712, 800
HpyAV CCTTC 1 cut(s) 27
HpyCH4III ACNGT 3 cut(s) 154, 574, 614
HpyCH4V TGCA 9 cut(s) 209, 222, 228, 273, 606, 628, 746, 865, 892
HpyF10VI GCNNNNNNNGC 1 cut(s) 586
HpyF3I CTNAG 8 cut(s) 93, 188, 330, 348, 522, 686, 770, 840
Hsp92II CATG 6 cut(s) 162, 249, 551, 587, 757, 896
HspAI GCGC 1 cut(s) 513
Kzo9I GATC 1 cut(s) 600
LguI GCTCTTC 1 cut(s) 536
LmnI GCTCC 1 cut(s) 585
Lsp1109I GCAGC 1 cut(s) 221
LweI GCATC 3 cut(s) 196, 231, 615
MaeIII GTNAC 2 cut(s) 154, 553
MalI GATC 1 cut(s) 602
MboI GATC 1 cut(s) 600
MboII GAAGA 9 cut(s) 48, 51, 54, 430, 511, 553, 646, 807, 825
MfeI CAATTG 2 cut(s) 558, 715
MhlI GDGCHC 2 cut(s) 489, 582
MnlI CCTC 5 cut(s) 277, 630, 650, 779, 847
MroXI GAANNNNTTC 1 cut(s) 396
MseI TTAA 3 cut(s) 320, 384, 848
MunI CAATTG 2 cut(s) 558, 715
MwoI GCNNNNNNNGC 1 cut(s) 586
NcoI CCATGG 1 cut(s) 245
NdeII GATC 1 cut(s) 600
NlaIII CATG 6 cut(s) 162, 249, 551, 587, 757, 896
NlaIV GGNNCC 2 cut(s) 451, 581
NmuCI GTSAC 2 cut(s) 154, 553
NspI RCATGY 1 cut(s) 896
PaeI GCATGC 1 cut(s) 896
PaqCI CACCTGC 1 cut(s) 619
PceI AGGCCT 1 cut(s) 186
PciSI GCTCTTC 1 cut(s) 536
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 3 cut(s) 53, 78, 812
PflMI CCANNNNNTGG 1 cut(s) 394
PkrI GCNGC 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 344
Psp5II RGGWCCY 1 cut(s) 344
PspN4I GGNNCC 2 cut(s) 451, 581
PspPI GGNCC 3 cut(s) 162, 344, 792
PspPPI RGGWCCY 1 cut(s) 344
PstNI CAGNNNCTG 1 cut(s) 347
SapI GCTCTTC 1 cut(s) 536
SaqAI TTAA 3 cut(s) 320, 384, 848
SatI GCNGC 1 cut(s) 210
Sau3AI GATC 1 cut(s) 600
Sau96I GGNCC 3 cut(s) 162, 344, 792
SduI GDGCHC 2 cut(s) 489, 582
SetI ASST 8 cut(s) 234, 288, 349, 376, 430, 597, 633, 641
SfaNI GCATC 3 cut(s) 196, 231, 615
SinI GGWCC 3 cut(s) 162, 344, 792
SphI GCATGC 1 cut(s) 896
SseBI AGGCCT 1 cut(s) 186
StuI AGGCCT 1 cut(s) 186
StyI CCWWGG 1 cut(s) 245
TaaI ACNGT 3 cut(s) 154, 574, 614
TfiI GAWTC 3 cut(s) 53, 78, 812
Tru1I TTAA 3 cut(s) 320, 384, 848
Tru9I TTAA 3 cut(s) 320, 384, 848
TscAI CASTG 4 cut(s) 125, 224, 778, 888
TseFI GTSAC 2 cut(s) 154, 553
TseI GCWGC 1 cut(s) 209
Tsp45I GTSAC 2 cut(s) 154, 553
TspDTI ATGAA 3 cut(s) 54, 460, 742
TspRI CASTG 4 cut(s) 125, 224, 778, 888
Van91I CCANNNNNTGG 1 cut(s) 394
VpaK11BI GGWCC 3 cut(s) 162, 344, 792
XapI RAATTY 3 cut(s) 169, 277, 503
XceI RCATGY 1 cut(s) 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 172
XmiI GTMKAC 1 cut(s) 114
XmnI GAANNNNTTC 1 cut(s) 396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.