Exosome complex component
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G03360 |
| fragaria_vesca | FvH4_2g24140 |
| malus_domestica | MD03G1271400.v1.1 MD11G1292000.v1.1 |
| prunus_persica | Prupe.8G247600_v2.0.a1 Prupe.8G248900_v2.0.a1 Prupe.8G248900_v2.0.a1 Prupe.8G248900_v2.0.a1 |
| pyrus_communis | pycom03g21600 |
| rosa_chinensis | RchiOBHm_Chr6g0291951 |
| rosa_laevigata | RLG00000012076 |
| rosa_roxburghii | Rroxscaffold_7G00175560 Rroxscaffold_7G00177980 |
| rosa_rugosa | Rorug06G0221900 |
| rosa_samantha | Rh6AG335700 Rh6BG343100 Rh6CG349300 Rh6DG336100 |
| rosa_wichuraiana | Rw6G029220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AccI | GTMKAC | 1 cut(s) | 401 |
| AciI | CCGC | 1 cut(s) | 571 |
| AclWI | GGATC | 1 cut(s) | 270 |
| AcsI | RAATTY | 1 cut(s) | 307 |
| AcuI | CTGAAG | 2 cut(s) | 60, 342 |
| AflIII | ACRYGT | 1 cut(s) | 232 |
| AgsI | TTSAA | 3 cut(s) | 56, 239, 415 |
| AluBI | AGCT | 2 cut(s) | 80, 103 |
| AluI | AGCT | 2 cut(s) | 80, 103 |
| Alw21I | GWGCWC | 1 cut(s) | 458 |
| Alw26I | GTCTC | 2 cut(s) | 347, 434 |
| AlwI | GGATC | 1 cut(s) | 270 |
| ApeKI | GCWGC | 3 cut(s) | 6, 157, 377 |
| ApoI | RAATTY | 1 cut(s) | 307 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 433, 465 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 1 cut(s) | 154 |
| Bbv12I | GWGCWC | 1 cut(s) | 458 |
| BbvI | GCAGC | 3 cut(s) | 18, 169, 364 |
| BccI | CCATC | 2 cut(s) | 56, 174 |
| BcoDI | GTCTC | 2 cut(s) | 347, 434 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BfmI | CTRYAG | 1 cut(s) | 423 |
| BisI | GCNGC | 3 cut(s) | 7, 158, 378 |
| BlsI | GCNGC | 3 cut(s) | 8, 159, 379 |
| BmsI | GCATC | 1 cut(s) | 280 |
| BsaAI | YACGTR | 1 cut(s) | 394 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 115, 145 |
| Bse1I | ACTGG | 1 cut(s) | 205 |
| BseNI | ACTGG | 1 cut(s) | 205 |
| BseRI | GAGGAG | 1 cut(s) | 32 |
| BseXI | GCAGC | 3 cut(s) | 18, 169, 364 |
| BsiHKAI | GWGCWC | 1 cut(s) | 458 |
| BslFI | GGGAC | 1 cut(s) | 113 |
| BsmAI | GTCTC | 2 cut(s) | 347, 434 |
| BsmBI | CGTCTC | 1 cut(s) | 434 |
| BsmFI | GGGAC | 1 cut(s) | 113 |
| Bsp1286I | GDGCHC | 1 cut(s) | 458 |
| Bsp143I | GATC | 2 cut(s) | 262, 325 |
| BspACI | CCGC | 1 cut(s) | 571 |
| BspPI | GGATC | 1 cut(s) | 270 |
| BsrI | ACTGG | 1 cut(s) | 205 |
| BssMI | GATC | 2 cut(s) | 262, 325 |
| Bst4CI | ACNGT | 2 cut(s) | 127, 445 |
| BstBAI | YACGTR | 1 cut(s) | 394 |
| BstC8I | GCNNGC | 1 cut(s) | 155 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 2 cut(s) | 265, 328 |
| BstMAI | GTCTC | 2 cut(s) | 347, 434 |
| BstMBI | GATC | 2 cut(s) | 262, 325 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 383 |
| BstNSI | RCATGY | 1 cut(s) | 236 |
| BstSFI | CTRYAG | 1 cut(s) | 423 |
| BstV1I | GCAGC | 3 cut(s) | 18, 169, 364 |
| Cac8I | GCNNGC | 1 cut(s) | 155 |
| CfoI | GCGC | 1 cut(s) | 6 |
| CseI | GACGC | 1 cut(s) | 159 |
| CviAII | CATG | 5 cut(s) | 59, 233, 436, 479, 541 |
| CviJI | RGCY | 5 cut(s) | 80, 103, 204, 377, 411 |
| CviKI_1 | RGCY | 5 cut(s) | 80, 103, 204, 377, 411 |
| DpnI | GATC | 2 cut(s) | 264, 327 |
| DpnII | GATC | 2 cut(s) | 262, 325 |
| Eco57I | CTGAAG | 2 cut(s) | 60, 342 |
| Esp3I | CGTCTC | 1 cut(s) | 434 |
| FaeI | CATG | 5 cut(s) | 62, 236, 439, 482, 544 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 146, 178 |
| FaqI | GGGAC | 1 cut(s) | 113 |
| FatI | CATG | 5 cut(s) | 58, 232, 435, 478, 540 |
| FauNDI | CATATG | 1 cut(s) | 368 |
| FblI | GTMKAC | 1 cut(s) | 401 |
| Fnu4HI | GCNGC | 3 cut(s) | 7, 158, 378 |
| Fsp4HI | GCNGC | 3 cut(s) | 7, 158, 378 |
| FspBI | CTAG | 1 cut(s) | 81 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 3 cut(s) | 7, 158, 378 |
| HgaI | GACGC | 1 cut(s) | 159 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 5 cut(s) | 62, 236, 439, 482, 544 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 3 cut(s) | 213, 524, 563 |
| HphI | GGTGA | 1 cut(s) | 154 |
| Hpy166II | GTNNAC | 3 cut(s) | 68, 271, 402 |
| Hpy188I | TCNGA | 3 cut(s) | 90, 280, 496 |
| Hpy188III | TCNNGA | 2 cut(s) | 320, 329 |
| Hpy8I | GTNNAC | 3 cut(s) | 68, 271, 402 |
| HpyAV | CCTTC | 2 cut(s) | 102, 514 |
| HpyCH4III | ACNGT | 2 cut(s) | 127, 445 |
| HpyCH4IV | ACGT | 1 cut(s) | 393 |
| HpyCH4V | TGCA | 3 cut(s) | 372, 380, 515 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 383 |
| HpySE526I | ACGT | 1 cut(s) | 393 |
| Hsp92II | CATG | 5 cut(s) | 62, 236, 439, 482, 544 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Kzo9I | GATC | 2 cut(s) | 262, 325 |
| LpnPI | CCDG | 7 cut(s) | 125, 186, 205, 206, 312, 333, 358 |
| Lsp1109I | GCAGC | 3 cut(s) | 18, 169, 364 |
| LweI | GCATC | 1 cut(s) | 280 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MaeII | ACGT | 1 cut(s) | 393 |
| MaeIII | GTNAC | 1 cut(s) | 241 |
| MalI | GATC | 2 cut(s) | 264, 327 |
| MboI | GATC | 2 cut(s) | 262, 325 |
| MboII | GAAGA | 1 cut(s) | 335 |
| MfeI | CAATTG | 1 cut(s) | 116 |
| MhlI | GDGCHC | 1 cut(s) | 458 |
| MluCI | AATT | 2 cut(s) | 116, 307 |
| MlyI | GAGTC | 2 cut(s) | 533, 557 |
| MnlI | CCTC | 2 cut(s) | 10, 141 |
| MunI | CAATTG | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 383 |
| NdeI | CATATG | 1 cut(s) | 368 |
| NdeII | GATC | 2 cut(s) | 262, 325 |
| NlaIII | CATG | 5 cut(s) | 62, 236, 439, 482, 544 |
| NmuCI | GTSAC | 1 cut(s) | 241 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| NspI | RCATGY | 1 cut(s) | 236 |
| PciI | ACATGT | 1 cut(s) | 232 |
| PfeI | GAWTC | 1 cut(s) | 213 |
| PflFI | GACNNNGTC | 1 cut(s) | 566 |
| PkrI | GCNGC | 3 cut(s) | 8, 159, 379 |
| PleI | GAGTC | 2 cut(s) | 532, 557 |
| PpsI | GAGTC | 2 cut(s) | 532, 557 |
| Ppu21I | YACGTR | 1 cut(s) | 394 |
| PscI | ACATGT | 1 cut(s) | 232 |
| PsyI | GACNNNGTC | 1 cut(s) | 566 |
| SatI | GCNGC | 3 cut(s) | 7, 158, 378 |
| Sau3AI | GATC | 2 cut(s) | 262, 325 |
| SchI | GAGTC | 2 cut(s) | 533, 557 |
| SduI | GDGCHC | 1 cut(s) | 458 |
| SetI | ASST | 5 cut(s) | 82, 105, 195, 301, 396 |
| SfaNI | GCATC | 1 cut(s) | 280 |
| SfcI | CTRYAG | 1 cut(s) | 423 |
| Sse9I | AATT | 2 cut(s) | 116, 307 |
| SsiI | CCGC | 1 cut(s) | 571 |
| SspI | AATATT | 1 cut(s) | 418 |
| SspMI | CTAG | 1 cut(s) | 81 |
| TaaI | ACNGT | 2 cut(s) | 127, 445 |
| TaiI | ACGT | 1 cut(s) | 396 |
| TasI | AATT | 2 cut(s) | 116, 307 |
| TfiI | GAWTC | 1 cut(s) | 213 |
| TseFI | GTSAC | 1 cut(s) | 241 |
| TseI | GCWGC | 3 cut(s) | 6, 157, 377 |
| Tsp45I | GTSAC | 1 cut(s) | 241 |
| TspDTI | ATGAA | 4 cut(s) | 205, 301, 318, 495 |
| Tth111I | GACNNNGTC | 1 cut(s) | 566 |
| XapI | RAATTY | 1 cut(s) | 307 |
| XceI | RCATGY | 1 cut(s) | 236 |
| XmiI | GTMKAC | 1 cut(s) | 401 |
| XspI | CTAG | 1 cut(s) | 81 |