Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0009505

Physical Location & Seq

Genomic Coordinates Reverse (-)

6348159 .. 6353808

Gene Structure 5650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g06250.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGTCCGAAAACGACGTCGTGACGCGGACGTTCCGGGCGCTGGTGGAAGGCGCCGACCGGAAGTTCGCTAGGGTTCGCGACGTGCCGGCGTACGGACGCCTCCCCAACCAGCACTACTTCCACAAGGTCTTCAAGGCCTATATGCGCCTCTGGAAGTACCAGCAGGAGAACCGCTCCAAGCTCGTCGGCGCCGGTCTGAACCGCTGGGAAATCGGCGAGATCGCCAGCCGGATCGGCCAGCTCTACTTCGGCCAGTATATGCGGACCAGTGAGGCCCGATTCCTCATCGAGGCCTACGTCTTCTACGAGGCCATTCTCAGCCGCAACTACTTCGATGGCTCCGCCGGCTCCAGAGGTTTTGGGAAGAAGGATATCGGAGTCCGGTTCAAGGAGCTGAGGTTCTACGCTCGGTTTTTGCTCGTTTCGTTGATTTTGAACCGGACCGAGACAGTTCAGCTTCTTGCTGAGCGGTTCAAATCGCTTGTTGACAACTGCAAAGCCAATTTTCGGGACACTAATTTTAAAGAATGGAGGCTAGTGGTGCAAGAAATTGCTCGATTTATGAAAGTTGATACGGCCTTTATGAATGTCAGGCCATTGCGATACTCCACCTTGTTTGATTCAAATCCAGCATCTCTTCCATATGTTACTCGTTTCCATGCAAGGAGAGTTTTAAAATTTCAAGATGCATTGTTGACAAGCTATCACCGTAATGAGGTCAAATTTGCTGAACTTACATTGGACACTTTCCGAATGCTGCAATGTTTGGAATGGGAGCCAAGTGGGTCTTTCTACCAAAAGCGACCAGTTGAACCAAAGGAGAATGGCGTTTTTATTGAACACTCTGGGGCTTCTGCGGCATCTGGTGTAATTGATTTGAACTTGGCTGCAGACATGACTGATCCAAGTTTACCACCAAATCCCAGGAAAGCTGTTATCTATCGTCCATCTGTGACACATTTGATAGCGGTGATGGCTACAATTTGTGAGGAGCTCCCTCTGGACAGTATTATGCTAGTGTATCTGTCAGCCTCAGGGAAGGTTGATCAAAGTAATACTAGTCAGGTGTACAATTCTGGGGGATCACAGAAGTCCTCAAAAAACAAAGTTCCTCTCCAAGATCAGAACAAGTTTCTGCCTGAATCACGTACAAATAACAAGGGAGAGTCAAGTGGCTATTATGATCAATATCTATGGTTTGGCCCTAGAGGAAATGGTGGTTTGAATAACCTTTACCCCGGCGATATAATTCCTTTTACTCGTAGACCTCTTTTCTTGGTAATAGATAGCGACAACAGCCATGCATTCAAGGTTTTACATGGAGCGGAAAGAGGAGAGACGGCTGCTCTGCTTCTTTCACCTATGAGACCAGCATTCAAAAATCCAGCTGATGCTGATTTAACGCAAAATGGAAGTCAGTTTACCTTTTTCTTGACTGCTCCCCTGGCAGCTTTCGGCCAATTAGTTGGCTTCTCCTCTTCTGATACCGAAGCAGAGGTTTATAGCAATGCTGAAAGCCTACTCTCTGCTGCCTTCTCTGAGTGGGAAGTTATTCTTTGTACAACGACAAGCCTGGATCTGATATGGGCACAAGTTATATCCGATCCTTTTTTGCGGCGACTTATTCTGAGATTTATATTCTGCAGAGCAGTGCTTTATTTCTTCTGTCCTCCTGAAGACAGCGAGCTGCATTTACCGGTTTGCCTTCCTCTTCTCCCAAATTCAGTTTCTCCAGATTCTGAAGTTGTGCGGTCTGCTGTCCAGAGGCTTGCGAAGCACCTCAGCGTCTCCGACTTATTTCACCTTGTTGAGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SCAI

Protein Analysis

606

Amino Acids

68.68

Weight (kDa)

8.74

Isoelectric Point (pI)

42.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009505)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G40050 AT4G40050
fragaria_vesca	FvH4_1g20260 FvH4_1g20260 FvH4_1g20260
malus_domestica	MD01G1035400.v1.1 MD15G1320400.v1.1
prunus_persica	Prupe.6G192800_v2.0.a1 Prupe.6G192800_v2.0.a1 Prupe.6G192800_v2.0.a1
pyrus_communis	pycom01g06250 pycom15g28150
rosa_chinensis	RchiOBHm_Chr2g0112401
rosa_laevigata	RLG00000017975
rosa_multiflora	Rmu_sc0004467.1_g000072
rosa_roxburghii	Rroxscaffold_2G00131470
rosa_rugosa	Rorug02G0180400
rosa_samantha	Rh2AG233700 Rh2BG246900 Rh2CG238000 Rh2DG241200
rosa_wichuraiana	Rw2G018080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	18
AccB1I	GGYRCC	2 cut(s)	50, 188
AccBSI	CCGCTC	3 cut(s)	174, 469, 1325
AccI	GTMKAC	1 cut(s)	1264
AccII	CGCG	2 cut(s)	25, 78
AclWI	GGATC	5 cut(s)	239, 896, 1090, 1584, 1598
AcoI	YGGCCR	3 cut(s)	235, 250, 1456
AcsI	RAATTY	3 cut(s)	677, 722, 1720
AcuI	CTGAAG	2 cut(s)	1695, 1761
AcyI	GRCGYC	4 cut(s)	15, 51, 97, 189
AfaI	GTAC	5 cut(s)	92, 158, 1070, 1150, 1561
AfiI	CCNNNNNNNGG	6 cut(s)	40, 92, 289, 388, 507, 715
AgeI	ACCGGT	1 cut(s)	1696
AhlI	ACTAGT	1 cut(s)	1058
AjiI	CACGTC	1 cut(s)	82
AjnI	CCWGG	3 cut(s)	923, 1443, 1572
AjuI	GAANNNNNNNTTGG	2 cut(s)	1711, 1743
AloI	GAACNNNNNNTCC	2 cut(s)	383, 415
Alw21I	GWGCWC	1 cut(s)	996
Alw26I	GTCTC	5 cut(s)	440, 1331, 1360, 1792, 1805
AlwI	GGATC	5 cut(s)	239, 896, 1090, 1584, 1598
AlwNI	CAGNNNCTG	1 cut(s)	1739
ApeKI	GCWGC	6 cut(s)	757, 887, 1343, 1448, 1529, 1687
ApoI	RAATTY	3 cut(s)	677, 722, 1720
ArsI	GACNNNNNNTTYG	5 cut(s)	32, 47, 79, 1399, 1431
AsiGI	ACCGGT	1 cut(s)	1696
Asp700I	GAANNNNTTC	1 cut(s)	1551
AspLEI	GCGC	4 cut(s)	40, 53, 147, 191
AspS9I	GGNCC	4 cut(s)	264, 274, 441, 1202
AsuC2I	CCSGG	2 cut(s)	35, 1239
AsuHPI	GGTGA	4 cut(s)	698, 982, 1350, 1793
AvaII	GGWCC	2 cut(s)	264, 441
AxyI	CCTNAGG	1 cut(s)	1033
BaeGI	GKGCMC	1 cut(s)	1591
BanI	GGYRCC	2 cut(s)	50, 188
BanII	GRGCYC	1 cut(s)	996
BarI	GAAGNNNNNNTAC	2 cut(s)	1405, 1437
BbsI	GAAGAC	3 cut(s)	121, 292, 1683
Bbv12I	GWGCWC	1 cut(s)	996
BbvCI	CCTCAGC	2 cut(s)	395, 1781
BbvI	GCAGC	6 cut(s)	744, 874, 1330, 1460, 1516, 1674
BccI	CCATC	3 cut(s)	329, 955, 967
BceAI	ACGGC	2 cut(s)	591, 1356
BcgI	CGANNNNNNTGC	2 cut(s)	313, 347
BciT130I	CCWGG	3 cut(s)	925, 1445, 1574
BclI	TGATCA	2 cut(s)	1045, 1183
BcnI	CCSGG	2 cut(s)	35, 1239
BcoDI	GTCTC	5 cut(s)	440, 1331, 1360, 1792, 1805
BcuI	ACTAGT	1 cut(s)	1058
BfaI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
BfmI	CTRYAG	2 cut(s)	888, 1642
BfoI	RGCGCY	3 cut(s)	41, 54, 192
BglI	GCCNNNNNGGC	1 cut(s)	234
BisI	GCNGC	9 cut(s)	322, 758, 858, 888, 1344, 1449, 1530, 1616, 1688
BlpI	GCTNAGC	1 cut(s)	465
BlsI	GCNGC	9 cut(s)	323, 759, 859, 889, 1345, 1450, 1531, 1617, 1689
Bme1390I	CCNGG	5 cut(s)	35, 925, 1239, 1445, 1574
Bme18I	GGWCC	2 cut(s)	264, 441
BmgBI	CACGTC	1 cut(s)	82
BmgT120I	GGNCC	4 cut(s)	264, 274, 441, 1202
BmiI	GGNNCC	5 cut(s)	52, 190, 340, 349, 777
BmrFI	CCNGG	5 cut(s)	35, 925, 1239, 1445, 1574
BmsI	GCATC	4 cut(s)	641, 676, 869, 1381
BpiI	GAAGAC	3 cut(s)	121, 292, 1683
BplI	GAGNNNNNCTC	2 cut(s)	158, 190
BpmI	CTGGAG	2 cut(s)	334, 1716
Bpu10I	CCTNAGC	2 cut(s)	395, 1781
Bpu1102I	GCTNAGC	1 cut(s)	465
BpuMI	CCSGG	2 cut(s)	35, 1239
BsaAI	YACGTR	1 cut(s)	1148
BsaBI	GATNNNNATC	2 cut(s)	624, 1188
BsaHI	GRCGYC	4 cut(s)	15, 51, 97, 189
BsaI	GGTCTC	1 cut(s)	1360
BsaJI	CCNNGG	3 cut(s)	923, 1237, 1443
BsaWI	WCCGGW	4 cut(s)	57, 381, 438, 1696
BsaXI	ACNNNNNCTCC	2 cut(s)	383, 413
Bsc4I	CCNNNNNNNGG	6 cut(s)	40, 92, 289, 388, 507, 715
Bse118I	RCCGGY	4 cut(s)	85, 191, 344, 1696
Bse1I	ACTGG	3 cut(s)	253, 267, 806
Bse21I	CCTNAGG	1 cut(s)	1033
Bse3DI	GCAATG	3 cut(s)	596, 767, 1513
Bse8I	GATNNNNATC	2 cut(s)	624, 1188
BseBI	CCWGG	3 cut(s)	925, 1445, 1574
BseDI	CCNNGG	3 cut(s)	923, 1237, 1443
BseJI	GATNNNNATC	2 cut(s)	624, 1188
BseLI	CCNNNNNNNGG	6 cut(s)	40, 92, 289, 388, 507, 715
BseMI	GCAATG	3 cut(s)	596, 767, 1513
BseMII	CTCAG	7 cut(s)	331, 386, 456, 1047, 1530, 1619, 1795
BseNI	ACTGG	3 cut(s)	253, 267, 806
BseRI	GAGGAG	3 cut(s)	1004, 1347, 1465
BseSI	GKGCMC	1 cut(s)	1591
BseXI	GCAGC	6 cut(s)	744, 874, 1330, 1460, 1516, 1674
BseYI	CCCAGC	1 cut(s)	204
Bsh1236I	CGCG	2 cut(s)	25, 78
Bsh1285I	CGRYCG	1 cut(s)	58
BshNI	GGYRCC	2 cut(s)	50, 188
BshTI	ACCGGT	1 cut(s)	1696
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	1 cut(s)	996
BsiWI	CGTACG	1 cut(s)	90
BslFI	GGGAC	1 cut(s)	524
BslI	CCNNNNNNNGG	6 cut(s)	40, 92, 289, 388, 507, 715
BsmAI	GTCTC	5 cut(s)	440, 1331, 1360, 1792, 1805
BsmBI	CGTCTC	2 cut(s)	1331, 1792
BsmFI	GGGAC	1 cut(s)	524
BsmI	GAATGC	3 cut(s)	759, 1304, 1373
Bso31I	GGTCTC	1 cut(s)	1360
Bsp1286I	GDGCHC	2 cut(s)	996, 1591
Bsp1407I	TGTACA	2 cut(s)	1068, 1559
Bsp143I	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
Bsp1720I	GCTNAGC	1 cut(s)	465
Bsp68I	TCGCGA	1 cut(s)	78
BspCNI	CTCAG	7 cut(s)	330, 387, 457, 1046, 1531, 1620, 1794
BspFNI	CGCG	2 cut(s)	25, 78
BspLI	GGNNCC	5 cut(s)	52, 190, 340, 349, 777
BspMAI	CTGCAG	2 cut(s)	892, 1646
BspPI	GGATC	5 cut(s)	239, 896, 1090, 1584, 1598
BspT107I	GGYRCC	2 cut(s)	50, 188
BspTNI	GGTCTC	1 cut(s)	1360
BsrBI	CCGCTC	3 cut(s)	174, 469, 1325
BsrDI	GCAATG	3 cut(s)	596, 767, 1513
BsrFI	RCCGGY	4 cut(s)	85, 191, 344, 1696
BsrGI	TGTACA	2 cut(s)	1068, 1559
BsrI	ACTGG	3 cut(s)	253, 267, 806
BssAI	RCCGGY	4 cut(s)	85, 191, 344, 1696
BssECI	CCNNGG	3 cut(s)	923, 1237, 1443
BssMI	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
BssNI	GRCGYC	4 cut(s)	15, 51, 97, 189
Bst2UI	CCWGG	3 cut(s)	925, 1445, 1574
Bst4CI	ACNGT	3 cut(s)	451, 710, 1007
Bst6I	CTCTTC	3 cut(s)	642, 1483, 1716
BstACI	GRCGYC	4 cut(s)	15, 51, 97, 189
BstAUI	TGTACA	2 cut(s)	1068, 1559
BstBAI	YACGTR	1 cut(s)	1148
BstC8I	GCNNGC	6 cut(s)	87, 226, 239, 346, 1685, 1770
BstDEI	CTNAG	7 cut(s)	317, 395, 465, 1033, 1539, 1628, 1781
BstENI	CCTNNNNNAGG	1 cut(s)	287
BstFNI	CGCG	2 cut(s)	25, 78
BstH2I	RGCGCY	3 cut(s)	41, 54, 192
BstHHI	GCGC	4 cut(s)	40, 53, 147, 191
BstKTI	GATC	9 cut(s)	222, 234, 904, 1048, 1085, 1123, 1186, 1579, 1606
BstMAI	GTCTC	5 cut(s)	440, 1331, 1360, 1792, 1805
BstMBI	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
BstMCI	CGRYCG	1 cut(s)	58
BstMWI	GCNNNNNNNGC	8 cut(s)	234, 345, 541, 857, 974, 1296, 1445, 1774
BstNI	CCWGG	3 cut(s)	925, 1445, 1574
BstSCI	CCNGG	5 cut(s)	33, 923, 1237, 1443, 1572
BstSFI	CTRYAG	2 cut(s)	888, 1642
BstSLI	GKGCMC	1 cut(s)	1591
BstUI	CGCG	2 cut(s)	25, 78
BstV1I	GCAGC	6 cut(s)	744, 874, 1330, 1460, 1516, 1674
BstV2I	GAAGAC	3 cut(s)	121, 292, 1683
BstX2I	RGATCY	1 cut(s)	1576
BstXI	CCANNNNNNTGG	1 cut(s)	1466
BstYI	RGATCY	1 cut(s)	1576
Bsu36I	CCTNAGG	1 cut(s)	1033
BtrI	CACGTC	1 cut(s)	82
BtsI	GCAGTG	1 cut(s)	1656
BtsIMutI	CAGTG	2 cut(s)	274, 1656
BtuMI	TCGCGA	1 cut(s)	78
Cac8I	GCNNGC	6 cut(s)	87, 226, 239, 346, 1685, 1770
CaiI	CAGNNNCTG	1 cut(s)	1739
CfoI	GCGC	4 cut(s)	40, 53, 147, 191
Cfr10I	RCCGGY	4 cut(s)	85, 191, 344, 1696
Cfr13I	GGNCC	4 cut(s)	264, 274, 441, 1202
CpoI	CGGWCCG	1 cut(s)	441
CseI	GACGC	3 cut(s)	31, 105, 1774
Csp6I	GTAC	5 cut(s)	91, 157, 1069, 1149, 1560
CspAI	ACCGGT	1 cut(s)	1696
CspCI	CAANNNNNGTGG	2 cut(s)	598, 633
CspI	CGGWCCG	1 cut(s)	441
CviAII	CATG	5 cut(s)	659, 895, 1301, 1319, 1815
CviQI	GTAC	5 cut(s)	91, 157, 1069, 1149, 1560
DdeI	CTNAG	7 cut(s)	317, 395, 465, 1033, 1539, 1628, 1781
DinI	GGCGCC	2 cut(s)	52, 190
DpnI	GATC	9 cut(s)	221, 233, 903, 1047, 1084, 1122, 1185, 1578, 1605
DpnII	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
DraI	TTTAAA	2 cut(s)	523, 675
EaeI	YGGCCR	3 cut(s)	235, 250, 1456
Eam1104I	CTCTTC	3 cut(s)	642, 1483, 1716
EarI	CTCTTC	3 cut(s)	642, 1483, 1716
EciI	GGCGGA	1 cut(s)	331
Ecl136II	GAGCTC	1 cut(s)	994
Eco147I	AGGCCT	2 cut(s)	137, 293
Eco24I	GRGCYC	1 cut(s)	996
Eco31I	GGTCTC	1 cut(s)	1360
Eco32I	GATATC	1 cut(s)	373
Eco47I	GGWCC	2 cut(s)	264, 441
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	2 cut(s)	1695, 1761
Eco81I	CCTNAGG	1 cut(s)	1033
EcoICRI	GAGCTC	1 cut(s)	994
EcoNI	CCTNNNNNAGG	1 cut(s)	287
EcoRII	CCWGG	3 cut(s)	923, 1443, 1572
EcoRV	GATATC	1 cut(s)	373
EcoT22I	ATGCAT	2 cut(s)	691, 1306
EcoT38I	GRGCYC	1 cut(s)	996
EgeI	GGCGCC	2 cut(s)	52, 190
EheI	GGCGCC	2 cut(s)	52, 190
Esp3I	CGTCTC	2 cut(s)	1331, 1792
FaeI	CATG	5 cut(s)	662, 898, 1304, 1322, 1818
FalI	AAGNNNNNCTT	4 cut(s)	772, 804, 1539, 1571
FaqI	GGGAC	1 cut(s)	524
FatI	CATG	5 cut(s)	658, 894, 1300, 1318, 1814
FauNDI	CATATG	1 cut(s)	643
FbaI	TGATCA	2 cut(s)	1045, 1183
FblI	GTMKAC	1 cut(s)	1264
Fnu4HI	GCNGC	9 cut(s)	322, 758, 858, 888, 1344, 1449, 1530, 1616, 1688
FriOI	GRGCYC	1 cut(s)	996
Fsp4HI	GCNGC	9 cut(s)	322, 758, 858, 888, 1344, 1449, 1530, 1616, 1688
FspBI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
GlaI	GCGC	4 cut(s)	39, 52, 146, 190
GluI	GCNGC	9 cut(s)	322, 758, 858, 888, 1344, 1449, 1530, 1616, 1688
GsaI	CCCAGC	1 cut(s)	208
GsuI	CTGGAG	2 cut(s)	334, 1716
HaeII	RGCGCY	3 cut(s)	41, 54, 192
HgaI	GACGC	3 cut(s)	31, 105, 1774
HhaI	GCGC	4 cut(s)	40, 53, 147, 191
Hin1I	GRCGYC	4 cut(s)	15, 51, 97, 189
Hin1II	CATG	5 cut(s)	662, 898, 1304, 1322, 1818
Hin6I	GCGC	4 cut(s)	38, 51, 145, 189
HinP1I	GCGC	4 cut(s)	38, 51, 145, 189
HincII	GTYRAC	2 cut(s)	487, 696
HindII	GTYRAC	2 cut(s)	487, 696
HinfI	GANTC	6 cut(s)	279, 378, 620, 1142, 1166, 1736
HphI	GGTGA	4 cut(s)	698, 982, 1350, 1793
Hpy166II	GTNNAC	6 cut(s)	487, 696, 911, 1069, 1265, 1422
Hpy8I	GTNNAC	6 cut(s)	487, 696, 911, 1069, 1265, 1422
Hpy99I	CGWCG	4 cut(s)	17, 20, 83, 188
HpyAV	CCTTC	5 cut(s)	41, 361, 1033, 1543, 1715
HpyCH4III	ACNGT	3 cut(s)	451, 710, 1007
HpyCH4IV	ACGT	5 cut(s)	15, 29, 81, 297, 1147
HpyCH4V	TGCA	9 cut(s)	495, 544, 662, 689, 760, 890, 1304, 1644, 1690
HpyF10VI	GCNNNNNNNGC	8 cut(s)	234, 345, 541, 857, 974, 1296, 1445, 1774
HpyF3I	CTNAG	7 cut(s)	317, 395, 465, 1033, 1539, 1628, 1781
HpySE526I	ACGT	5 cut(s)	15, 29, 81, 297, 1147
Hsp92I	GRCGYC	4 cut(s)	15, 51, 97, 189
Hsp92II	CATG	5 cut(s)	662, 898, 1304, 1322, 1818
HspAI	GCGC	4 cut(s)	38, 51, 145, 189
KasI	GGCGCC	2 cut(s)	50, 188
KroI	GCCGGC	2 cut(s)	85, 344
KroNI	GCCGGC	2 cut(s)	87, 346
Ksp22I	TGATCA	2 cut(s)	1045, 1183
Kzo9I	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
LmnI	GCTCC	9 cut(s)	179, 344, 353, 391, 775, 991, 999, 1322, 1444
Lsp1109I	GCAGC	6 cut(s)	744, 874, 1330, 1460, 1516, 1674
LweI	GCATC	4 cut(s)	641, 676, 869, 1381
MaeI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
MaeII	ACGT	5 cut(s)	15, 29, 81, 297, 1147
MaeIII	GTNAC	3 cut(s)	19, 646, 952
MalI	GATC	9 cut(s)	221, 233, 903, 1047, 1084, 1122, 1185, 1578, 1605
MbiI	CCGCTC	3 cut(s)	174, 469, 1325
MboI	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
MboII	GAAGA	8 cut(s)	121, 292, 376, 629, 1470, 1654, 1688, 1703
MflI	RGATCY	1 cut(s)	1576
MhlI	GDGCHC	2 cut(s)	996, 1591
Mly113I	GGCGCC	2 cut(s)	51, 189
MlyI	GAGTC	2 cut(s)	387, 1175
MmeI	TCCRAC	1 cut(s)	1815
Mph1103I	ATGCAT	2 cut(s)	691, 1306
MroNI	GCCGGC	2 cut(s)	85, 344
MroXI	GAANNNNTTC	1 cut(s)	1551
MseI	TTAA	3 cut(s)	522, 674, 1400
MslI	CAYNNNNRTG	1 cut(s)	711
MspA1I	CMGCKG	2 cut(s)	204, 1388
MspR9I	CCNGG	5 cut(s)	35, 925, 1239, 1445, 1574
Mva1269I	GAATGC	3 cut(s)	759, 1304, 1373
MvaI	CCWGG	3 cut(s)	925, 1445, 1574
MvnI	CGCG	2 cut(s)	25, 78
MwoI	GCNNNNNNNGC	8 cut(s)	234, 345, 541, 857, 974, 1296, 1445, 1774
NaeI	GCCGGC	2 cut(s)	87, 346
NarI	GGCGCC	2 cut(s)	51, 189
NciI	CCSGG	2 cut(s)	35, 1239
NdeI	CATATG	1 cut(s)	643
NdeII	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
NgoMIV	GCCGGC	2 cut(s)	85, 344
NlaIII	CATG	5 cut(s)	662, 898, 1304, 1322, 1818
NlaIV	GGNNCC	5 cut(s)	52, 190, 340, 349, 777
NmuCI	GTSAC	2 cut(s)	19, 952
NruI	TCGCGA	1 cut(s)	78
NsiI	ATGCAT	2 cut(s)	691, 1306
PceI	AGGCCT	2 cut(s)	137, 293
PcsI	WCGNNNNNNNCGW	2 cut(s)	294, 303
PctI	GAATGC	3 cut(s)	759, 1304, 1373
PdiI	GCCGGC	2 cut(s)	87, 346
PdmI	GAANNNNTTC	1 cut(s)	1551
PfeI	GAWTC	4 cut(s)	279, 620, 1142, 1736
Pfl23II	CGTACG	1 cut(s)	90
PinAI	ACCGGT	1 cut(s)	1696
PkrI	GCNGC	9 cut(s)	323, 759, 859, 889, 1345, 1450, 1531, 1617, 1689
PleI	GAGTC	2 cut(s)	386, 1174
PluTI	GGCGCC	2 cut(s)	54, 192
PpsI	GAGTC	2 cut(s)	386, 1174
Ppu21I	YACGTR	1 cut(s)	1148
Psp124BI	GAGCTC	1 cut(s)	996
Psp6I	CCWGG	3 cut(s)	923, 1443, 1572
PspFI	CCCAGC	1 cut(s)	204
PspGI	CCWGG	3 cut(s)	923, 1443, 1572
PspLI	CGTACG	1 cut(s)	90
PspN4I	GGNNCC	5 cut(s)	52, 190, 340, 349, 777
PspPI	GGNCC	4 cut(s)	264, 274, 441, 1202
PstI	CTGCAG	2 cut(s)	892, 1646
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	1 cut(s)	1576
PvuII	CAGCTG	1 cut(s)	1388
RruI	TCGCGA	1 cut(s)	78
RsaI	GTAC	5 cut(s)	92, 158, 1070, 1150, 1561
RsaNI	GTAC	5 cut(s)	91, 157, 1069, 1149, 1560
RseI	CAYNNNNRTG	1 cut(s)	711
Rsr2I	CGGWCCG	1 cut(s)	441
RsrII	CGGWCCG	1 cut(s)	441
SacI	GAGCTC	1 cut(s)	996
SaqAI	TTAA	3 cut(s)	522, 674, 1400
SatI	GCNGC	9 cut(s)	322, 758, 858, 888, 1344, 1449, 1530, 1616, 1688
Sau3AI	GATC	9 cut(s)	219, 231, 901, 1045, 1082, 1120, 1183, 1576, 1603
Sau96I	GGNCC	4 cut(s)	264, 274, 441, 1202
SchI	GAGTC	2 cut(s)	387, 1175
ScrFI	CCNGG	5 cut(s)	35, 925, 1239, 1445, 1574
SduI	GDGCHC	2 cut(s)	996, 1591
SfaNI	GCATC	4 cut(s)	641, 676, 869, 1381
SfcI	CTRYAG	2 cut(s)	888, 1642
SfoI	GGCGCC	2 cut(s)	52, 190
SinI	GGWCC	2 cut(s)	264, 441
SmiMI	CAYNNNNRTG	1 cut(s)	711
SpeI	ACTAGT	1 cut(s)	1058
SseBI	AGGCCT	2 cut(s)	137, 293
SspDI	GGCGCC	2 cut(s)	50, 188
SspMI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
SstI	GAGCTC	1 cut(s)	996
StuI	AGGCCT	2 cut(s)	137, 293
StyD4I	CCNGG	5 cut(s)	33, 923, 1237, 1443, 1572
TaaI	ACNGT	3 cut(s)	451, 710, 1007
TaiI	ACGT	5 cut(s)	18, 32, 84, 300, 1150
TaqI	TCGA	3 cut(s)	288, 333, 556
TaqII	GACCGA	1 cut(s)	458
TatI	WGTACW	2 cut(s)	1068, 1559
TauI	GCSGC	3 cut(s)	324, 860, 1618
TfiI	GAWTC	4 cut(s)	279, 620, 1142, 1736
Tru1I	TTAA	3 cut(s)	522, 674, 1400
Tru9I	TTAA	3 cut(s)	522, 674, 1400
TscAI	CASTG	2 cut(s)	274, 1656
TseFI	GTSAC	2 cut(s)	19, 952
TseI	GCWGC	6 cut(s)	757, 887, 1343, 1448, 1529, 1687
Tsp45I	GTSAC	2 cut(s)	19, 952
TspDTI	ATGAA	2 cut(s)	578, 599
TspGWI	ACGGA	1 cut(s)	108
TspRI	CASTG	2 cut(s)	274, 1656
VpaK11BI	GGWCC	2 cut(s)	264, 441
XagI	CCTNNNNNAGG	1 cut(s)	287
XapI	RAATTY	3 cut(s)	677, 722, 1720
XmiI	GTMKAC	1 cut(s)	1264
XmnI	GAANNNNTTC	1 cut(s)	1551
XspI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
ZraI	GACGTC	1 cut(s)	16
Zsp2I	ATGCAT	2 cut(s)	691, 1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.