Rroxscaffold_2G00131470

Protein SCAI

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0009505
Physical Location & Seq
Reverse (-)
68085457 .. 68090608
5152 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00131470.1

Sequence Viewer

Length: 1806 bp
ATGTCAGATAACGACGTTGTTTCCGGCACGTTCCGGGCGCTGGTGGAGAGCGCGGACCGGAAGTTCGCGAGGGTCCGGGACGTGCCGGCGTACGGGCGCGTGCACAACCAGCACTACTTTCACAAGGTGTTCAAGGCTTACATGCGGCTGTGGAAGTACCAGCAGGAGAACCGGGCCAAGCTCGTCGAGGCCGGTCTGAACCGGTGGGAAATCGGCGAGATCGCCAGCCGGATCGGCCAGTTGTACTTCGGGCAGTACATGAGGACGAGCGAGGCGAGGTTTCTGGCCGAGGCGTACGTCTTCTACGAGGCCATACTGAGCCGGCGGTACTTCGAGGGAGGGTCCAAGAGTTTGGGGAAGAAGGATCTTGGAATCCGGTTCAAGGAGTTGAGATTCTACGCTAGATTCTTGCTGGTTTCGTTGATTTTGAACCGGACCGAGATGGTTCAGCTGCTCGCCGAGCGGTTCAAGGCTCTGGTTGATGACAGCAGAGCCAATTACAGGGAAACTAATTTTAAAGAATGGAGGCTAGTGGTGCAAGAAATTGTGCGATTTATGAAAGTTGATACGGCCTTTATGAATGTCAGGCCACTGCGATACTCTGCCATGTTTGATTCACATCCAGCGTCTCTCCCATATGTGGCTCGTTTCCATGCAAAGAGAGTTCTAAAATTTCAAGATGCACTGCTAACAAGCTATCACCGGAATGAGGCCAAATTTGCTGAACTTACGTTGGACACATACCGAATGCTGCAATGTTTGGAATGGGAGCCAAGCGGATCTTTCTACCAAAAGCGCCCTGTTGAATCAAAAGAGAACGGCTCTTTTATTGAGCACTCTGGGGCTTCTGCGGCTTCTGGAGTCATTGATATGAACTTGGCTGCAGATATGACTGATCCAAGTTTACCTCCAAATCCAAGGAAGGCGGTTATCTATCGTCCATCTGTGACACATTTGATAGCGGTGATGGCAACAATATGTGAAGAACTCCCTGTGGACAGTGTTATGCTACTGTACCTGTCAGCCTCAGGGACGGCTGGTCGTAGTAATGTAAATCAGCTATACAACTCTGGAGGATCACTAAAATCATCAAAAAATAAAGTTCCTCTCCCAGATCAGACTACTTCTCGGCCTGAATCTTGTAATGGCAAGGCAGAGTCAAGTGGCTATTATGATAAGTATCTGTGGTTTGGTCCTAGAGGAAATGGCGGTGAGAATAACCTTTACCCTGGAGACATAATTCCTTTTACTCGCAGACCTCTTTTCTTGATAGTTGATAGTGACAACAGCCATGCATTCAAGGCAGTTGCTCAAGTTTTACATGGTGCGGAAAGGGGAGAGACGGCTGCTCTGCTTCTTTCACCTTTGAGACCAGCATTCAAGAATCCAGCTGATGCTGAATTAGCGCAAAACGGAAGTCAGTTCACTTTTTTCTTGACCGCTCCTCTCTCAGCCTTCTGCCAATTAGTTGGTCTCTCCCCTTCTGATACTGAAACAGACGTTTATAAAGGTGCTGAGAGCATACTTTCTGATGCCTTCTCTAAGTGGGAAGTAATACTGTGTACATCAACAAACATGAATCTGGTATGGGCACAAGTTATACCTGATCCCTTTCTGCGGCGACTTATTCTGAGAGCTGTGCTTGTGCTCTTCTGTCCTCCAGAAGATAGTGAACAATATTTGCCGGTTTGTCTACCCTTTCTTCCCAATTCTGTCTCTCCAGATTCTGAAGTAGTGCAATCTACTGTCCTCCGGCTTGCAAAGCACCTCAGAGTTGATGACTGTTTTAACTTTGACGACACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SCAI

Protein Analysis

601

Amino Acids

68.02

Weight (kDa)

8.43

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAI PF12070 13 - 548 4.7e-193 Protein SCAI
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1506
AccBSI CCGCTC 2 cut(s) 463, 1442
AccI GTMKAC 1 cut(s) 1693
AccII CGCG 3 cut(s) 53, 68, 99
AclWI GGATC 6 cut(s) 239, 372, 787, 890, 1084, 1601
AcoI YGGCCR 2 cut(s) 235, 285
AcsI RAATTY 2 cut(s) 671, 716
AcuI CTGAAG 1 cut(s) 1749
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 8 cut(s) 92, 158, 245, 257, 296, 329, 1016, 1564
AfiI CCNNNNNNNGG 7 cut(s) 40, 92, 382, 501, 640, 709, 1617
AgeI ACCGGT 1 cut(s) 201
AgsI TTSAA 8 cut(s) 133, 382, 430, 469, 677, 806, 1300, 1381
AhdI GACNNNNNGTC 1 cut(s) 1038
AjiI CACGTC 1 cut(s) 82
AjnI CCWGG 1 cut(s) 1228
AloI GAACNNNNNNTCC 2 cut(s) 47, 79
AluBI AGCT 6 cut(s) 181, 451, 696, 1060, 1391, 1637
AluI AGCT 6 cut(s) 181, 451, 696, 1060, 1391, 1637
Alw21I GWGCWC 3 cut(s) 105, 837, 1650
Alw26I GTCTC 6 cut(s) 633, 1227, 1334, 1363, 1478, 1720
Alw44I GTGCAC 1 cut(s) 101
AlwI GGATC 6 cut(s) 239, 372, 787, 890, 1084, 1601
AlwNI CAGNNNCTG 1 cut(s) 1727
AoxI GGCC 9 cut(s) 174, 189, 235, 285, 309, 570, 587, 711, 1130
ApaLI GTGCAC 1 cut(s) 101
ApeKI GCWGC 4 cut(s) 451, 751, 881, 1346
ApoI RAATTY 2 cut(s) 671, 716
ArsI GACNNNNNNTTYG 4 cut(s) 47, 79, 1402, 1434
AsiGI ACCGGT 1 cut(s) 201
AspLEI GCGC 5 cut(s) 40, 53, 99, 798, 1408
AspS9I GGNCC 6 cut(s) 55, 73, 174, 342, 435, 1193
AsuC2I CCSGG 3 cut(s) 35, 77, 173
AsuHPI GGTGA 4 cut(s) 692, 976, 1223, 1353
AvaII GGWCC 5 cut(s) 55, 73, 342, 435, 1193
AxyI CCTNAGG 1 cut(s) 1027
BaeGI GKGCMC 2 cut(s) 105, 1594
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 3 cut(s) 105, 837, 1650
BbvI GCAGC 4 cut(s) 438, 738, 868, 1333
BccI CCATC 3 cut(s) 436, 949, 961
BceAI ACGGC 4 cut(s) 585, 835, 1050, 1359
BciT130I CCWGG 1 cut(s) 1230
BcnI CCSGG 3 cut(s) 35, 77, 173
BcoDI GTCTC 6 cut(s) 633, 1227, 1334, 1363, 1478, 1720
BfaI CTAG 3 cut(s) 402, 530, 1197
BfmI CTRYAG 1 cut(s) 882
BfoI RGCGCY 2 cut(s) 41, 799
BglI GCCNNNNNGGC 1 cut(s) 234
BisI GCNGC 7 cut(s) 146, 452, 752, 852, 882, 1347, 1619
BlsI GCNGC 7 cut(s) 147, 453, 753, 853, 883, 1348, 1620
Bme1390I CCNGG 4 cut(s) 35, 77, 173, 1230
Bme18I GGWCC 5 cut(s) 55, 73, 342, 435, 1193
BmeRI GACNNNNNGTC 1 cut(s) 1038
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 6 cut(s) 55, 73, 174, 342, 435, 1193
BmiI GGNNCC 3 cut(s) 74, 343, 771
BmrFI CCNGG 4 cut(s) 35, 77, 173, 1230
BmsI GCATC 3 cut(s) 670, 1384, 1522
BpiI GAAGAC 1 cut(s) 292
BplI GAGNNNNNCTC 2 cut(s) 806, 838
BpmI CTGGAG 5 cut(s) 879, 1092, 1251, 1644, 1704
BpuEI CTTGAG 1 cut(s) 1296
BpuMI CCSGG 3 cut(s) 35, 77, 173
BsaBI GATNNNNATC 2 cut(s) 618, 1179
BsaI GGTCTC 2 cut(s) 1363, 1478
BsaJI CCNNGG 3 cut(s) 288, 917, 1228
BsaWI WCCGGW 5 cut(s) 57, 201, 375, 432, 702
Bsc4I CCNNNNNNNGG 7 cut(s) 40, 92, 382, 501, 640, 709, 1617
Bse118I RCCGGY 5 cut(s) 85, 191, 201, 321, 1684
Bse1I ACTGG 1 cut(s) 238
Bse21I CCTNAGG 1 cut(s) 1027
Bse3DI GCAATG 1 cut(s) 761
Bse8I GATNNNNATC 2 cut(s) 618, 1179
BseBI CCWGG 1 cut(s) 1230
BseDI CCNNGG 3 cut(s) 288, 917, 1228
BseGI GGATG 1 cut(s) 619
BseJI GATNNNNATC 2 cut(s) 618, 1179
BseLI CCNNNNNNNGG 7 cut(s) 40, 92, 382, 501, 640, 709, 1617
BseMI GCAATG 1 cut(s) 761
BseMII CTCAG 6 cut(s) 308, 1041, 1464, 1506, 1622, 1783
BseNI ACTGG 1 cut(s) 238
BseRI GAGGAG 1 cut(s) 1434
BseSI GKGCMC 2 cut(s) 105, 1594
BseXI GCAGC 4 cut(s) 438, 738, 868, 1333
Bsh1236I CGCG 3 cut(s) 53, 68, 99
BshFI GGCC 9 cut(s) 176, 191, 237, 287, 311, 572, 589, 713, 1132
BshTI ACCGGT 1 cut(s) 201
BsiHKAI GWGCWC 3 cut(s) 105, 837, 1650
BsiWI CGTACG 2 cut(s) 90, 294
BslFI GGGAC 2 cut(s) 92, 1045
BslI CCNNNNNNNGG 7 cut(s) 40, 92, 382, 501, 640, 709, 1617
BsmAI GTCTC 6 cut(s) 633, 1227, 1334, 1363, 1478, 1720
BsmBI CGTCTC 2 cut(s) 633, 1334
BsmFI GGGAC 2 cut(s) 92, 1045
BsmI GAATGC 3 cut(s) 753, 1295, 1376
BsnI GGCC 9 cut(s) 176, 191, 237, 287, 311, 572, 589, 713, 1132
Bso31I GGTCTC 2 cut(s) 1363, 1478
Bsp1286I GDGCHC 4 cut(s) 105, 837, 1594, 1650
Bsp1407I TGTACA 1 cut(s) 1562
Bsp143I GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
Bsp68I TCGCGA 1 cut(s) 68
BspANI GGCC 9 cut(s) 176, 191, 237, 287, 311, 572, 589, 713, 1132
BspCNI CTCAG 6 cut(s) 309, 1040, 1463, 1507, 1623, 1782
BspFNI CGCG 3 cut(s) 53, 68, 99
BspLI GGNNCC 3 cut(s) 74, 343, 771
BspMAI CTGCAG 1 cut(s) 886
BspPI GGATC 6 cut(s) 239, 372, 787, 890, 1084, 1601
BspQI GCTCTTC 1 cut(s) 1655
BspTNI GGTCTC 2 cut(s) 1363, 1478
BsrBI CCGCTC 2 cut(s) 463, 1442
BsrDI GCAATG 1 cut(s) 761
BsrFI RCCGGY 5 cut(s) 85, 191, 201, 321, 1684
BsrGI TGTACA 1 cut(s) 1562
BsrI ACTGG 1 cut(s) 238
BssAI RCCGGY 5 cut(s) 85, 191, 201, 321, 1684
BssECI CCNNGG 3 cut(s) 288, 917, 1228
BssMI GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
BssT1I CCWWGG 1 cut(s) 917
Bst2UI CCWGG 1 cut(s) 1230
Bst4CI ACNGT 5 cut(s) 1001, 1014, 1560, 1747, 1784
Bst6I CTCTTC 1 cut(s) 1655
BstAUI TGTACA 1 cut(s) 1562
BstC8I GCNNGC 6 cut(s) 87, 101, 226, 323, 456, 1758
BstDEI CTNAG 7 cut(s) 317, 1027, 1450, 1515, 1542, 1631, 1769
BstF5I GGATG 1 cut(s) 619
BstFNI CGCG 3 cut(s) 53, 68, 99
BstH2I RGCGCY 2 cut(s) 41, 799
BstHHI GCGC 5 cut(s) 40, 53, 99, 798, 1408
BstKTI GATC 8 cut(s) 222, 234, 367, 782, 898, 1079, 1117, 1609
BstMAI GTCTC 6 cut(s) 633, 1227, 1334, 1363, 1478, 1720
BstMBI GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
BstNI CCWGG 1 cut(s) 1230
BstNSI RCATGY 1 cut(s) 145
BstSCI CCNGG 4 cut(s) 33, 75, 171, 1228
BstSFI CTRYAG 1 cut(s) 882
BstSLI GKGCMC 2 cut(s) 105, 1594
BstUI CGCG 3 cut(s) 53, 68, 99
BstV1I GCAGC 4 cut(s) 438, 738, 868, 1333
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 2 cut(s) 364, 779
BstXI CCANNNNNNTGG 2 cut(s) 352, 1469
BstYI RGATCY 2 cut(s) 364, 779
Bsu36I CCTNAGG 1 cut(s) 1027
BsuRI GGCC 9 cut(s) 176, 191, 237, 287, 311, 572, 589, 713, 1132
BtrI CACGTC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 619
BtsI GCAGTG 2 cut(s) 590, 683
BtsIMutI CAGTG 3 cut(s) 590, 683, 1006
BtuMI TCGCGA 1 cut(s) 68
Cac8I GCNNGC 6 cut(s) 87, 101, 226, 323, 456, 1758
CaiI CAGNNNCTG 1 cut(s) 1727
CfoI GCGC 5 cut(s) 40, 53, 99, 798, 1408
Cfr10I RCCGGY 5 cut(s) 85, 191, 201, 321, 1684
Cfr13I GGNCC 6 cut(s) 55, 73, 174, 342, 435, 1193
CpoI CGGWCCG 2 cut(s) 55, 435
CseI GACGC 1 cut(s) 615
Csp6I GTAC 8 cut(s) 91, 157, 244, 256, 295, 328, 1015, 1563
CspAI ACCGGT 1 cut(s) 201
CspI CGGWCCG 2 cut(s) 55, 435
CviAII CATG 8 cut(s) 142, 259, 607, 653, 1292, 1322, 1576, 1803
CviQI GTAC 8 cut(s) 91, 157, 244, 256, 295, 328, 1015, 1563
DdeI CTNAG 7 cut(s) 317, 1027, 1450, 1515, 1542, 1631, 1769
DpnI GATC 8 cut(s) 221, 233, 366, 781, 897, 1078, 1116, 1608
DpnII GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
DraI TTTAAA 1 cut(s) 517
DraIII CACNNNGTG 1 cut(s) 127
DriI GACNNNNNGTC 1 cut(s) 1038
EaeI YGGCCR 2 cut(s) 235, 285
Eam1104I CTCTTC 1 cut(s) 1655
Eam1105I GACNNNNNGTC 1 cut(s) 1038
EarI CTCTTC 1 cut(s) 1655
Eco130I CCWWGG 1 cut(s) 917
Eco31I GGTCTC 2 cut(s) 1363, 1478
Eco47I GGWCC 5 cut(s) 55, 73, 342, 435, 1193
Eco57I CTGAAG 1 cut(s) 1749
Eco81I CCTNAGG 1 cut(s) 1027
EcoRII CCWGG 1 cut(s) 1228
EcoT14I CCWWGG 1 cut(s) 917
EcoT22I ATGCAT 1 cut(s) 1297
ErhI CCWWGG 1 cut(s) 917
Esp3I CGTCTC 2 cut(s) 633, 1334
FaeI CATG 8 cut(s) 145, 262, 610, 656, 1295, 1325, 1579, 1806
FalI AAGNNNNNCTT 2 cut(s) 766, 798
FaqI GGGAC 2 cut(s) 92, 1045
FatI CATG 8 cut(s) 141, 258, 606, 652, 1291, 1321, 1575, 1802
FauNDI CATATG 1 cut(s) 637
FblI GTMKAC 1 cut(s) 1693
Fnu4HI GCNGC 7 cut(s) 146, 452, 752, 852, 882, 1347, 1619
FokI GGATG 1 cut(s) 606
Fsp4HI GCNGC 7 cut(s) 146, 452, 752, 852, 882, 1347, 1619
FspBI CTAG 3 cut(s) 402, 530, 1197
GlaI GCGC 5 cut(s) 39, 52, 98, 797, 1407
GluI GCNGC 7 cut(s) 146, 452, 752, 852, 882, 1347, 1619
GsuI CTGGAG 5 cut(s) 879, 1092, 1251, 1644, 1704
HaeII RGCGCY 2 cut(s) 41, 799
HaeIII GGCC 9 cut(s) 176, 191, 237, 287, 311, 572, 589, 713, 1132
HgaI GACGC 1 cut(s) 615
HhaI GCGC 5 cut(s) 40, 53, 99, 798, 1408
Hin1II CATG 8 cut(s) 145, 262, 610, 656, 1295, 1325, 1579, 1806
Hin6I GCGC 5 cut(s) 38, 51, 97, 796, 1406
HinP1I GCGC 5 cut(s) 38, 51, 97, 796, 1406
HphI GGTGA 4 cut(s) 692, 976, 1223, 1353
Hpy166II GTNNAC 7 cut(s) 103, 905, 997, 1425, 1563, 1673, 1694
Hpy188I TCNGA 8 cut(s) 7, 198, 1119, 1486, 1531, 1632, 1729, 1772
Hpy188III TCNNGA 9 cut(s) 67, 677, 858, 1071, 1267, 1381, 1435, 1661, 1721
Hpy8I GTNNAC 7 cut(s) 103, 905, 997, 1425, 1563, 1673, 1694
Hpy99I CGWCG 2 cut(s) 17, 188
HpyAV CCTTC 5 cut(s) 355, 916, 1465, 1491, 1546
HpyCH4III ACNGT 5 cut(s) 1001, 1014, 1560, 1747, 1784
HpyCH4IV ACGT 6 cut(s) 15, 29, 81, 297, 731, 1500
HpyCH4V TGCA 9 cut(s) 103, 538, 656, 683, 754, 884, 1295, 1738, 1760
HpyF3I CTNAG 7 cut(s) 317, 1027, 1450, 1515, 1542, 1631, 1769
HpySE526I ACGT 6 cut(s) 15, 29, 81, 297, 731, 1500
Hsp92II CATG 8 cut(s) 145, 262, 610, 656, 1295, 1325, 1579, 1806
HspAI GCGC 5 cut(s) 38, 51, 97, 796, 1406
KroI GCCGGC 2 cut(s) 85, 321
KroNI GCCGGC 2 cut(s) 87, 323
Kzo9I GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
LguI GCTCTTC 1 cut(s) 1655
LmnI GCTCC 2 cut(s) 769, 1447
Lsp1109I GCAGC 4 cut(s) 438, 738, 868, 1333
LweI GCATC 3 cut(s) 670, 1384, 1522
MaeI CTAG 3 cut(s) 402, 530, 1197
MaeII ACGT 6 cut(s) 15, 29, 81, 297, 731, 1500
MaeIII GTNAC 2 cut(s) 946, 1280
MalI GATC 8 cut(s) 221, 233, 366, 781, 897, 1078, 1116, 1608
MbiI CCGCTC 2 cut(s) 463, 1442
MboI GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
MboII GAAGA 6 cut(s) 292, 370, 995, 1642, 1676, 1694
MflI RGATCY 2 cut(s) 364, 779
MhlI GDGCHC 4 cut(s) 105, 837, 1594, 1650
MluCI AATT 9 cut(s) 496, 511, 543, 671, 716, 1239, 1400, 1463, 1708
MlyI GAGTC 2 cut(s) 870, 1166
MmeI TCCRAC 1 cut(s) 714
Mph1103I ATGCAT 1 cut(s) 1297
MroNI GCCGGC 2 cut(s) 85, 321
MseI TTAA 2 cut(s) 516, 1788
MslI CAYNNNNRTG 2 cut(s) 705, 869
MspA1I CMGCKG 2 cut(s) 451, 1391
MspR9I CCNGG 4 cut(s) 35, 77, 173, 1230
Mva1269I GAATGC 3 cut(s) 753, 1295, 1376
MvaI CCWGG 1 cut(s) 1230
MvnI CGCG 3 cut(s) 53, 68, 99
NaeI GCCGGC 2 cut(s) 87, 323
NciI CCSGG 3 cut(s) 35, 77, 173
NdeI CATATG 1 cut(s) 637
NdeII GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
NgoMIV GCCGGC 2 cut(s) 85, 321
NlaIII CATG 8 cut(s) 145, 262, 610, 656, 1295, 1325, 1579, 1806
NlaIV GGNNCC 3 cut(s) 74, 343, 771
NmeAIII GCCGAG 3 cut(s) 313, 484, 1108
NmuCI GTSAC 2 cut(s) 946, 1280
NruI TCGCGA 1 cut(s) 68
NsiI ATGCAT 1 cut(s) 1297
NspI RCATGY 1 cut(s) 145
PciSI GCTCTTC 1 cut(s) 1655
PcsI WCGNNNNNNNCGW 2 cut(s) 272, 303
PctI GAATGC 3 cut(s) 753, 1295, 1376
PdiI GCCGGC 2 cut(s) 87, 323
PfeI GAWTC 9 cut(s) 372, 393, 405, 614, 806, 1136, 1384, 1579, 1724
Pfl23II CGTACG 2 cut(s) 90, 294
PfoI TCCNGGA 1 cut(s) 75
PinAI ACCGGT 1 cut(s) 201
PkrI GCNGC 7 cut(s) 147, 453, 753, 853, 883, 1348, 1620
PleI GAGTC 2 cut(s) 869, 1165
PpsI GAGTC 2 cut(s) 869, 1165
PsiI TTATAA 1 cut(s) 1506
Psp6I CCWGG 1 cut(s) 1228
PspGI CCWGG 1 cut(s) 1228
PspLI CGTACG 2 cut(s) 90, 294
PspN4I GGNNCC 3 cut(s) 74, 343, 771
PspPI GGNCC 6 cut(s) 55, 73, 174, 342, 435, 1193
PstI CTGCAG 1 cut(s) 886
PstNI CAGNNNCTG 1 cut(s) 1727
PsuI RGATCY 2 cut(s) 364, 779
PvuII CAGCTG 2 cut(s) 451, 1391
RruI TCGCGA 1 cut(s) 68
RsaI GTAC 8 cut(s) 92, 158, 245, 257, 296, 329, 1016, 1564
RsaNI GTAC 8 cut(s) 91, 157, 244, 256, 295, 328, 1015, 1563
RseI CAYNNNNRTG 2 cut(s) 705, 869
Rsr2I CGGWCCG 2 cut(s) 55, 435
RsrII CGGWCCG 2 cut(s) 55, 435
SapI GCTCTTC 1 cut(s) 1655
SaqAI TTAA 2 cut(s) 516, 1788
SatI GCNGC 7 cut(s) 146, 452, 752, 852, 882, 1347, 1619
Sau3AI GATC 8 cut(s) 219, 231, 364, 779, 895, 1076, 1114, 1606
Sau96I GGNCC 6 cut(s) 55, 73, 174, 342, 435, 1193
SchI GAGTC 2 cut(s) 870, 1166
ScrFI CCNGG 4 cut(s) 35, 77, 173, 1230
SduI GDGCHC 4 cut(s) 105, 837, 1594, 1650
SfaNI GCATC 3 cut(s) 670, 1384, 1522
SfcI CTRYAG 1 cut(s) 882
SinI GGWCC 5 cut(s) 55, 73, 342, 435, 1193
SmiMI CAYNNNNRTG 2 cut(s) 705, 869
SmlI CTYRAG 1 cut(s) 1311
SmoI CTYRAG 1 cut(s) 1311
Sse9I AATT 9 cut(s) 496, 511, 543, 671, 716, 1239, 1400, 1463, 1708
SspI AATATT 1 cut(s) 1679
SspMI CTAG 3 cut(s) 402, 530, 1197
StyD4I CCNGG 4 cut(s) 33, 75, 171, 1228
StyI CCWWGG 1 cut(s) 917
TaaI ACNGT 5 cut(s) 1001, 1014, 1560, 1747, 1784
TaiI ACGT 6 cut(s) 18, 32, 84, 300, 734, 1503
TaqI TCGA 2 cut(s) 186, 333
TaqII GACCGA 1 cut(s) 452
TasI AATT 9 cut(s) 496, 511, 543, 671, 716, 1239, 1400, 1463, 1708
TatI WGTACW 3 cut(s) 243, 255, 1562
TauI GCSGC 3 cut(s) 148, 854, 1621
TfiI GAWTC 9 cut(s) 372, 393, 405, 614, 806, 1136, 1384, 1579, 1724
Tru1I TTAA 2 cut(s) 516, 1788
Tru9I TTAA 2 cut(s) 516, 1788
TscAI CASTG 3 cut(s) 597, 690, 1006
TseFI GTSAC 2 cut(s) 946, 1280
TseI GCWGC 4 cut(s) 451, 751, 881, 1346
Tsp45I GTSAC 2 cut(s) 946, 1280
TspDTI ATGAA 4 cut(s) 572, 593, 887, 1592
TspGWI ACGGA 1 cut(s) 1428
TspRI CASTG 3 cut(s) 597, 690, 1006
VneI GTGCAC 1 cut(s) 101
VpaK11BI GGWCC 5 cut(s) 55, 73, 342, 435, 1193
XapI RAATTY 2 cut(s) 671, 716
XceI RCATGY 1 cut(s) 145
XmiI GTMKAC 1 cut(s) 1693
XspI CTAG 3 cut(s) 402, 530, 1197
Zsp2I ATGCAT 1 cut(s) 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.