Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009505

Physical Location & Seq

Genomic Coordinates Forward (+)

23890158 .. 23895932

Gene Structure 5775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g28150.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGTCCGAAAACGACGTCGTGACGCGGACGTTCCGGGCCCTGGTGGAGGGCGCCGACCGGAAGTTTGCTAGGGTTCGCGACGTGCCGGCGTACGGACGCCTCCACAACCAGCACTACTTCCACAAGGTCTTCAAGGCCTACATGCGCCTATGGAAGTACCAGCAGGAGAACCGCTCTAAGCTCGTCGCCGCCGGCCTGAACCGCTGGGAAATCGGCGAGATCGCCAGCCCGATCGGCCAGCTCTACTTCGGCCAGTACATGCGCACCAGCGAGGCCCGATTCCTCGTCGAGGCCTACGTCTTCTACGAGGCCATTCTCAGCCGCAGCTACTTCGACGGCTCCACCGGTTCCAGAGGTTTCGGGAAGAAGGATATCGGAGTCCGCTTCAAGGAGTTGAGATTCTACGCCCGGTTTTTGCTTGTTTCCTTGATTTTGAACCGAACCGAGACGGTTCGTCTTCTCGCCGAGCGGTTCAAATCGCTTGTTGATGACTGCAAAGCCAATTTTCGGGACACTAATTTTAAAGAATGGAGGCTAGTGGTGCAAGAAATTGCTCGATTTATGAAAGTTGATACGGCCTTTATGAATGTCAGGCCATTGCGATACTCTACCTTGTTTGATTCGCATCCAGCATCTCTTCCATATGTTGCTCGTTTCCATGCAAAGAGAGTCTTAAAATTTCAAGATGCATTGTTAACAAGCTATCACCATAATGAGGTCAAATTTGCTGAACTTACATTGGACACCTACCGAATGCTGCAATGTTTGGAATGGGAGCCAAGCGGGTCTTTCTACCAAAAGCGTCCAGTTGAACCAAAGGAGAATGGTGTTTTTATTGAACACTCTGGGGCTTCTGCAGCATCTGGAGTAATTGATATGAACTTGGCTGCGGACATGACTGATCCAAGTTTACCCCCAAATCCAAGGAAAGCTGTTATCTATCGTCCATCTGTGACACATTTGATAGCGGTGATGGCTACAATATGTGAGGAGCTTCCTCTGGACAGTATTATGCTAGTTTATCTGTCAGCCTCAGGGAAGGTTGGTCGCAGTAATGCTAGTCAGGTGTACAACTCTGGAGGATCACAGAAGTCCTCAAAAAACAAAGCTCCTCTCCAAGATCAGAATAAGTTTCTGCCTGAATCATGTATAAATAACAAGGGAGAGTCGAGTGGCTATTATGATCAATATCTGTGGTTTGGTCCTAGAGGAAATGGTGGTTTGAACAACCTTTACCCTGGCGATATAATTCCTTTTACTCGTAGGCCTCTTTTCTTGGTAATAGATAGCGACAACAGCCATGCATTCAAGGTTTTACATGGAGCGGAAAGAGGAGAGACGGCTGCTCTGCTTCTTTCACCTTTGAGACCAGCGTTCAAGAATCCAGCTGATGCTGATTTAACGCAAAATGGAAGTCAGTTTACCTTTTTCTTGACTGCTCCCTTGGCAGCATTCTGCCAATTAGTTGGATTCTCCTCTTCTGATACCGAAGCAGAGGTTTATAGCAAAGCTGAAAGCATACTCTTGGCTGCCTTCTCTGAGTGGGAAGTTATTCTTTGTACGACAAGAAGCCTGGATCTGGTATGGGCACAAGTTCTATCAGATCCTTTTTTGCGGCGACTTATTCTGAGATTTATATTCTGCAGAGCTGTGCTTTCTTTCTTCTGCCCTCCTGAAGATAGTGAGCAGCATTTGCCGGTTTGCCTACCTATTCTTCCCAATCCCGTTTCTCCAGATTCTGAAGTTGTGTGGTCTGCTGTCCACAGGCTTGCAAAGCACCTCACCGTCTCTGACTATTTTCACTTTGTTGACACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SCAI

Protein Analysis

606

Amino Acids

68.73

Weight (kDa)

8.65

Isoelectric Point (pI)

44.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009505)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G40050 AT4G40050
fragaria_vesca	FvH4_1g20260 FvH4_1g20260 FvH4_1g20260
malus_domestica	MD01G1035400.v1.1 MD15G1320400.v1.1
prunus_persica	Prupe.6G192800_v2.0.a1 Prupe.6G192800_v2.0.a1 Prupe.6G192800_v2.0.a1
pyrus_communis	pycom01g06250 pycom15g28150
rosa_chinensis	RchiOBHm_Chr2g0112401
rosa_laevigata	RLG00000017975
rosa_multiflora	Rmu_sc0004467.1_g000072
rosa_roxburghii	Rroxscaffold_2G00131470
rosa_rugosa	Rorug02G0180400
rosa_samantha	Rh2AG233700 Rh2BG246900 Rh2CG238000 Rh2DG241200
rosa_wichuraiana	Rw2G018080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	18
Acc16I	TGCGCA	1 cut(s)	263
AccB1I	GGYRCC	1 cut(s)	50
AccBSI	CCGCTC	3 cut(s)	174, 469, 1325
AccII	CGCG	2 cut(s)	25, 78
AclWI	GGATC	4 cut(s)	896, 1090, 1584, 1598
AcoI	YGGCCR	2 cut(s)	235, 250
AcsI	RAATTY	2 cut(s)	677, 722
AcuI	CTGAAG	2 cut(s)	1695, 1761
AcyI	GRCGYC	3 cut(s)	15, 51, 97
AfaI	GTAC	5 cut(s)	92, 158, 257, 1070, 1561
AfiI	CCNNNNNNNGG	8 cut(s)	40, 46, 92, 289, 388, 507, 715, 1579
AgeI	ACCGGT	1 cut(s)	344
AhdI	GACNNNNNGTC	1 cut(s)	453
AjiI	CACGTC	1 cut(s)	82
AjnI	CCWGG	3 cut(s)	39, 1237, 1572
Alw26I	GTCTC	4 cut(s)	440, 1331, 1360, 1792
AlwI	GGATC	4 cut(s)	896, 1090, 1584, 1598
AlwNI	CAGNNNCTG	2 cut(s)	863, 1739
ApaI	GGGCCC	1 cut(s)	40
ApeKI	GCWGC	8 cut(s)	324, 757, 857, 887, 1343, 1448, 1529, 1687
ApoI	RAATTY	2 cut(s)	677, 722
ArsI	GACNNNNNNTTYG	5 cut(s)	32, 47, 79, 1399, 1431
AsiGI	ACCGGT	1 cut(s)	344
Asp700I	GAANNNNTTC	1 cut(s)	1551
AspLEI	GCGC	3 cut(s)	53, 147, 264
AspS9I	GGNCC	4 cut(s)	36, 37, 274, 1202
AsuC2I	CCSGG	2 cut(s)	35, 409
AsuHPI	GGTGA	4 cut(s)	698, 982, 1350, 1774
AvaII	GGWCC	1 cut(s)	1202
AxyI	CCTNAGG	1 cut(s)	1033
BaeGI	GKGCMC	2 cut(s)	40, 1591
BanI	GGYRCC	1 cut(s)	50
BanII	GRGCYC	1 cut(s)	40
BarI	GAAGNNNNNNTAC	2 cut(s)	1405, 1437
BbsI	GAAGAC	3 cut(s)	121, 292, 449
BbvI	GCAGC	8 cut(s)	336, 744, 869, 874, 1330, 1460, 1516, 1699
BccI	CCATC	2 cut(s)	955, 967
BceAI	ACGGC	3 cut(s)	352, 591, 1356
BcgI	CGANNNNNNTGC	2 cut(s)	313, 347
BciT130I	CCWGG	3 cut(s)	41, 1239, 1574
BclI	TGATCA	1 cut(s)	1183
BcnI	CCSGG	2 cut(s)	35, 409
BcoDI	GTCTC	4 cut(s)	440, 1331, 1360, 1792
BfaI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
BfmI	CTRYAG	2 cut(s)	855, 1642
BfoI	RGCGCY	1 cut(s)	54
BglI	GCCNNNNNGGC	1 cut(s)	234
Bme1390I	CCNGG	5 cut(s)	35, 41, 409, 1239, 1574
Bme18I	GGWCC	1 cut(s)	1202
BmeRI	GACNNNNNGTC	1 cut(s)	453
BmgBI	CACGTC	1 cut(s)	82
BmgT120I	GGNCC	4 cut(s)	36, 37, 274, 1202
BmiI	GGNNCC	5 cut(s)	38, 52, 340, 349, 777
BmrFI	CCNGG	5 cut(s)	35, 41, 409, 1239, 1574
BmsI	GCATC	5 cut(s)	634, 641, 676, 869, 1381
BpiI	GAAGAC	3 cut(s)	121, 292, 449
BplI	GAGNNNNNCTC	2 cut(s)	158, 190
BpmI	CTGGAG	3 cut(s)	885, 1098, 1716
BpuMI	CCSGG	2 cut(s)	35, 409
BsaBI	GATNNNNATC	2 cut(s)	624, 1188
BsaHI	GRCGYC	3 cut(s)	15, 51, 97
BsaI	GGTCTC	1 cut(s)	1360
BsaJI	CCNNGG	4 cut(s)	39, 923, 1237, 1443
BsaWI	WCCGGW	2 cut(s)	57, 344
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 46, 92, 289, 388, 507, 715, 1579
Bse118I	RCCGGY	4 cut(s)	85, 191, 344, 1696
Bse1I	ACTGG	2 cut(s)	253, 806
Bse21I	CCTNAGG	1 cut(s)	1033
Bse3DI	GCAATG	2 cut(s)	596, 767
Bse8I	GATNNNNATC	2 cut(s)	624, 1188
BseBI	CCWGG	3 cut(s)	41, 1239, 1574
BseDI	CCNNGG	4 cut(s)	39, 923, 1237, 1443
BseGI	GGATG	1 cut(s)	625
BseJI	GATNNNNATC	2 cut(s)	624, 1188
BseLI	CCNNNNNNNGG	8 cut(s)	40, 46, 92, 289, 388, 507, 715, 1579
BseMI	GCAATG	2 cut(s)	596, 767
BseMII	CTCAG	4 cut(s)	331, 1047, 1530, 1619
BseNI	ACTGG	2 cut(s)	253, 806
BseRI	GAGGAG	4 cut(s)	1004, 1101, 1347, 1465
BseSI	GKGCMC	2 cut(s)	40, 1591
BseXI	GCAGC	8 cut(s)	336, 744, 869, 874, 1330, 1460, 1516, 1699
BseYI	CCCAGC	1 cut(s)	204
Bsh1236I	CGCG	2 cut(s)	25, 78
Bsh1285I	CGRYCG	2 cut(s)	58, 234
BshNI	GGYRCC	1 cut(s)	50
BshTI	ACCGGT	1 cut(s)	344
BsiEI	CGRYCG	2 cut(s)	58, 234
BsiSI	CCGG	7 cut(s)	34, 58, 86, 192, 345, 409, 1697
BsiWI	CGTACG	1 cut(s)	90
BslFI	GGGAC	1 cut(s)	524
BslI	CCNNNNNNNGG	8 cut(s)	40, 46, 92, 289, 388, 507, 715, 1579
BsmAI	GTCTC	4 cut(s)	440, 1331, 1360, 1792
BsmBI	CGTCTC	3 cut(s)	440, 1331, 1792
BsmFI	GGGAC	1 cut(s)	524
BsmI	GAATGC	3 cut(s)	759, 1304, 1451
Bso31I	GGTCTC	1 cut(s)	1360
Bsp120I	GGGCCC	1 cut(s)	36
Bsp1286I	GDGCHC	2 cut(s)	40, 1591
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp143I	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
Bsp68I	TCGCGA	1 cut(s)	78
BspCNI	CTCAG	4 cut(s)	330, 1046, 1531, 1620
BspFNI	CGCG	2 cut(s)	25, 78
BspLI	GGNNCC	5 cut(s)	38, 52, 340, 349, 777
BspMAI	CTGCAG	2 cut(s)	859, 1646
BspPI	GGATC	4 cut(s)	896, 1090, 1584, 1598
BspT107I	GGYRCC	1 cut(s)	50
BspTNI	GGTCTC	1 cut(s)	1360
BsrBI	CCGCTC	3 cut(s)	174, 469, 1325
BsrDI	GCAATG	2 cut(s)	596, 767
BsrFI	RCCGGY	4 cut(s)	85, 191, 344, 1696
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	2 cut(s)	253, 806
BssAI	RCCGGY	4 cut(s)	85, 191, 344, 1696
BssECI	CCNNGG	4 cut(s)	39, 923, 1237, 1443
BssMI	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
BssNI	GRCGYC	3 cut(s)	15, 51, 97
BssT1I	CCWWGG	2 cut(s)	923, 1443
Bst2UI	CCWGG	3 cut(s)	41, 1239, 1574
Bst4CI	ACNGT	3 cut(s)	451, 1007, 1786
Bst6I	CTCTTC	2 cut(s)	642, 1483
BstACI	GRCGYC	3 cut(s)	15, 51, 97
BstAPI	GCANNNNNTGC	1 cut(s)	1693
BstAUI	TGTACA	1 cut(s)	1068
BstC8I	GCNNGC	5 cut(s)	87, 193, 226, 239, 1770
BstDEI	CTNAG	5 cut(s)	177, 317, 1033, 1539, 1628
BstENI	CCTNNNNNAGG	2 cut(s)	44, 287
BstF5I	GGATG	1 cut(s)	625
BstFNI	CGCG	2 cut(s)	25, 78
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	3 cut(s)	53, 147, 264
BstKTI	GATC	8 cut(s)	222, 234, 904, 1085, 1123, 1186, 1579, 1606
BstMAI	GTCTC	4 cut(s)	440, 1331, 1360, 1792
BstMBI	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
BstMCI	CGRYCG	2 cut(s)	58, 234
BstMWI	GCNNNNNNNGC	9 cut(s)	201, 234, 541, 857, 974, 1296, 1445, 1693, 1774
BstNI	CCWGG	3 cut(s)	41, 1239, 1574
BstNSI	RCATGY	2 cut(s)	145, 262
BstSCI	CCNGG	5 cut(s)	33, 39, 407, 1237, 1572
BstSFI	CTRYAG	2 cut(s)	855, 1642
BstSLI	GKGCMC	2 cut(s)	40, 1591
BstUI	CGCG	2 cut(s)	25, 78
BstV1I	GCAGC	8 cut(s)	336, 744, 869, 874, 1330, 1460, 1516, 1699
BstV2I	GAAGAC	3 cut(s)	121, 292, 449
BstX2I	RGATCY	2 cut(s)	1576, 1603
BstXI	CCANNNNNNTGG	1 cut(s)	1466
BstYI	RGATCY	2 cut(s)	1576, 1603
Bsu36I	CCTNAGG	1 cut(s)	1033
BtrI	CACGTC	1 cut(s)	82
BtsCI	GGATG	1 cut(s)	625
BtuMI	TCGCGA	1 cut(s)	78
Cac8I	GCNNGC	5 cut(s)	87, 193, 226, 239, 1770
CaiI	CAGNNNCTG	2 cut(s)	863, 1739
CfoI	GCGC	3 cut(s)	53, 147, 264
Cfr10I	RCCGGY	4 cut(s)	85, 191, 344, 1696
Cfr13I	GGNCC	4 cut(s)	36, 37, 274, 1202
CseI	GACGC	3 cut(s)	31, 105, 791
Csp6I	GTAC	5 cut(s)	91, 157, 256, 1069, 1560
CspAI	ACCGGT	1 cut(s)	344
CspCI	CAANNNNNGTGG	2 cut(s)	1175, 1210
CviAII	CATG	8 cut(s)	142, 259, 659, 895, 1146, 1301, 1319, 1815
CviQI	GTAC	5 cut(s)	91, 157, 256, 1069, 1560
DdeI	CTNAG	5 cut(s)	177, 317, 1033, 1539, 1628
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	8 cut(s)	221, 233, 903, 1084, 1122, 1185, 1578, 1605
DpnII	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
DraI	TTTAAA	1 cut(s)	523
DriI	GACNNNNNGTC	1 cut(s)	453
EaeI	YGGCCR	2 cut(s)	235, 250
Eam1104I	CTCTTC	2 cut(s)	642, 1483
Eam1105I	GACNNNNNGTC	1 cut(s)	453
EarI	CTCTTC	2 cut(s)	642, 1483
Eco130I	CCWWGG	2 cut(s)	923, 1443
Eco147I	AGGCCT	3 cut(s)	137, 293, 1267
Eco24I	GRGCYC	1 cut(s)	40
Eco31I	GGTCTC	1 cut(s)	1360
Eco32I	GATATC	1 cut(s)	373
Eco47I	GGWCC	1 cut(s)	1202
Eco57I	CTGAAG	2 cut(s)	1695, 1761
Eco81I	CCTNAGG	1 cut(s)	1033
EcoNI	CCTNNNNNAGG	2 cut(s)	44, 287
EcoO109I	RGGNCCY	1 cut(s)	37
EcoRII	CCWGG	3 cut(s)	39, 1237, 1572
EcoRV	GATATC	1 cut(s)	373
EcoT14I	CCWWGG	2 cut(s)	923, 1443
EcoT22I	ATGCAT	2 cut(s)	691, 1306
EcoT38I	GRGCYC	1 cut(s)	40
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	2 cut(s)	923, 1443
Esp3I	CGTCTC	3 cut(s)	440, 1331, 1792
FaeI	CATG	8 cut(s)	145, 262, 662, 898, 1149, 1304, 1322, 1818
FalI	AAGNNNNNCTT	6 cut(s)	656, 688, 772, 804, 1539, 1571
FaqI	GGGAC	1 cut(s)	524
FatI	CATG	8 cut(s)	141, 258, 658, 894, 1145, 1300, 1318, 1814
FauI	CCCGC	1 cut(s)	776
FauNDI	CATATG	1 cut(s)	643
FbaI	TGATCA	1 cut(s)	1183
FokI	GGATG	1 cut(s)	612
FriOI	GRGCYC	1 cut(s)	40
FspAI	RTGCGCAY	1 cut(s)	263
FspBI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
FspI	TGCGCA	1 cut(s)	263
GlaI	GCGC	3 cut(s)	52, 146, 263
GsaI	CCCAGC	1 cut(s)	208
GsuI	CTGGAG	3 cut(s)	885, 1098, 1716
HaeII	RGCGCY	1 cut(s)	54
HapII	CCGG	7 cut(s)	34, 58, 86, 192, 345, 409, 1697
HgaI	GACGC	3 cut(s)	31, 105, 791
HhaI	GCGC	3 cut(s)	53, 147, 264
Hin1I	GRCGYC	3 cut(s)	15, 51, 97
Hin1II	CATG	8 cut(s)	145, 262, 662, 898, 1149, 1304, 1322, 1818
Hin6I	GCGC	3 cut(s)	51, 145, 262
HinP1I	GCGC	3 cut(s)	51, 145, 262
HincII	GTYRAC	2 cut(s)	696, 1810
HindII	GTYRAC	2 cut(s)	696, 1810
HpaI	GTTAAC	1 cut(s)	696
HpaII	CCGG	7 cut(s)	34, 58, 86, 192, 345, 409, 1697
HphI	GGTGA	4 cut(s)	698, 982, 1350, 1774
Hpy166II	GTNNAC	6 cut(s)	696, 911, 1069, 1422, 1762, 1810
Hpy188I	TCNGA	9 cut(s)	7, 377, 1125, 1483, 1540, 1603, 1629, 1741, 1792
Hpy8I	GTNNAC	6 cut(s)	696, 911, 1069, 1422, 1762, 1810
Hpy99I	CGWCG	6 cut(s)	17, 20, 83, 188, 290, 338
HpyAV	CCTTC	3 cut(s)	361, 1033, 1543
HpyCH4III	ACNGT	3 cut(s)	451, 1007, 1786
HpyCH4IV	ACGT	4 cut(s)	15, 29, 81, 297
HpyCH4V	TGCA	9 cut(s)	495, 544, 662, 689, 760, 857, 1304, 1644, 1772
HpyF10VI	GCNNNNNNNGC	9 cut(s)	201, 234, 541, 857, 974, 1296, 1445, 1693, 1774
HpyF3I	CTNAG	5 cut(s)	177, 317, 1033, 1539, 1628
HpySE526I	ACGT	4 cut(s)	15, 29, 81, 297
Hsp92I	GRCGYC	3 cut(s)	15, 51, 97
Hsp92II	CATG	8 cut(s)	145, 262, 662, 898, 1149, 1304, 1322, 1818
HspAI	GCGC	3 cut(s)	51, 145, 262
KasI	GGCGCC	1 cut(s)	50
KroI	GCCGGC	2 cut(s)	85, 191
KroNI	GCCGGC	2 cut(s)	87, 193
Ksp22I	TGATCA	1 cut(s)	1183
KspAI	GTTAAC	1 cut(s)	696
Kzo9I	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
LmnI	GCTCC	6 cut(s)	344, 775, 991, 1114, 1322, 1444
Lsp1109I	GCAGC	8 cut(s)	336, 744, 869, 874, 1330, 1460, 1516, 1699
LweI	GCATC	5 cut(s)	634, 641, 676, 869, 1381
MaeI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
MaeII	ACGT	4 cut(s)	15, 29, 81, 297
MaeIII	GTNAC	2 cut(s)	19, 952
MalI	GATC	8 cut(s)	221, 233, 903, 1084, 1122, 1185, 1578, 1605
MbiI	CCGCTC	3 cut(s)	174, 469, 1325
MboI	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
MboII	GAAGA	9 cut(s)	121, 292, 376, 449, 629, 1470, 1654, 1688, 1706
MflI	RGATCY	2 cut(s)	1576, 1603
MhlI	GDGCHC	2 cut(s)	40, 1591
MluCI	AATT	8 cut(s)	502, 517, 549, 677, 722, 870, 1248, 1460
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	3 cut(s)	387, 678, 1175
MmeI	TCCRAC	1 cut(s)	1447
Mph1103I	ATGCAT	2 cut(s)	691, 1306
MroNI	GCCGGC	2 cut(s)	85, 191
MroXI	GAANNNNTTC	1 cut(s)	1551
MseI	TTAA	4 cut(s)	522, 674, 695, 1400
MslI	CAYNNNNRTG	1 cut(s)	711
MspA1I	CMGCKG	2 cut(s)	204, 1388
MspI	CCGG	7 cut(s)	34, 58, 86, 192, 345, 409, 1697
MspR9I	CCNGG	5 cut(s)	35, 41, 409, 1239, 1574
Mva1269I	GAATGC	3 cut(s)	759, 1304, 1451
MvaI	CCWGG	3 cut(s)	41, 1239, 1574
MvnI	CGCG	2 cut(s)	25, 78
MwoI	GCNNNNNNNGC	9 cut(s)	201, 234, 541, 857, 974, 1296, 1445, 1693, 1774
NaeI	GCCGGC	2 cut(s)	87, 193
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	2 cut(s)	35, 409
NdeI	CATATG	1 cut(s)	643
NdeII	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
NgoMIV	GCCGGC	2 cut(s)	85, 191
NlaIII	CATG	8 cut(s)	145, 262, 662, 898, 1149, 1304, 1322, 1818
NlaIV	GGNNCC	5 cut(s)	38, 52, 340, 349, 777
NmeAIII	GCCGAG	1 cut(s)	490
NmuCI	GTSAC	2 cut(s)	19, 952
NruI	TCGCGA	1 cut(s)	78
NsbI	TGCGCA	1 cut(s)	263
NsiI	ATGCAT	2 cut(s)	691, 1306
NspI	RCATGY	2 cut(s)	145, 262
PceI	AGGCCT	3 cut(s)	137, 293, 1267
PcsI	WCGNNNNNNNCGW	2 cut(s)	294, 303
PctI	GAATGC	3 cut(s)	759, 1304, 1451
PdiI	GCCGGC	2 cut(s)	87, 193
PdmI	GAANNNNTTC	1 cut(s)	1551
PfeI	GAWTC	7 cut(s)	279, 399, 620, 1142, 1381, 1470, 1736
Pfl23II	CGTACG	1 cut(s)	90
PinAI	ACCGGT	1 cut(s)	344
Ple19I	CGATCG	1 cut(s)	234
PleI	GAGTC	3 cut(s)	386, 677, 1174
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	3 cut(s)	386, 677, 1174
Psp6I	CCWGG	3 cut(s)	39, 1237, 1572
PspFI	CCCAGC	1 cut(s)	204
PspGI	CCWGG	3 cut(s)	39, 1237, 1572
PspLI	CGTACG	1 cut(s)	90
PspN4I	GGNNCC	5 cut(s)	38, 52, 340, 349, 777
PspOMI	GGGCCC	1 cut(s)	36
PspPI	GGNCC	4 cut(s)	36, 37, 274, 1202
PsrI	GAACNNNNNNTAC	2 cut(s)	1217, 1249
PstI	CTGCAG	2 cut(s)	859, 1646
PstNI	CAGNNNCTG	2 cut(s)	863, 1739
PsuI	RGATCY	2 cut(s)	1576, 1603
PvuI	CGATCG	1 cut(s)	234
PvuII	CAGCTG	1 cut(s)	1388
RruI	TCGCGA	1 cut(s)	78
RsaI	GTAC	5 cut(s)	92, 158, 257, 1070, 1561
RsaNI	GTAC	5 cut(s)	91, 157, 256, 1069, 1560
RseI	CAYNNNNRTG	1 cut(s)	711
SaqAI	TTAA	4 cut(s)	522, 674, 695, 1400
Sau3AI	GATC	8 cut(s)	219, 231, 901, 1082, 1120, 1183, 1576, 1603
Sau96I	GGNCC	4 cut(s)	36, 37, 274, 1202
SchI	GAGTC	3 cut(s)	387, 678, 1175
ScrFI	CCNGG	5 cut(s)	35, 41, 409, 1239, 1574
SduI	GDGCHC	2 cut(s)	40, 1591
SfaNI	GCATC	5 cut(s)	634, 641, 676, 869, 1381
SfcI	CTRYAG	2 cut(s)	855, 1642
SfoI	GGCGCC	1 cut(s)	52
SinI	GGWCC	1 cut(s)	1202
SmiMI	CAYNNNNRTG	1 cut(s)	711
Sse9I	AATT	8 cut(s)	502, 517, 549, 677, 722, 870, 1248, 1460
SseBI	AGGCCT	3 cut(s)	137, 293, 1267
SspDI	GGCGCC	1 cut(s)	50
SspMI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
StuI	AGGCCT	3 cut(s)	137, 293, 1267
StyD4I	CCNGG	5 cut(s)	33, 39, 407, 1237, 1572
StyI	CCWWGG	2 cut(s)	923, 1443
TaaI	ACNGT	3 cut(s)	451, 1007, 1786
TaiI	ACGT	4 cut(s)	18, 32, 84, 300
TaqI	TCGA	4 cut(s)	288, 333, 556, 1169
TasI	AATT	8 cut(s)	502, 517, 549, 677, 722, 870, 1248, 1460
TatI	WGTACW	2 cut(s)	255, 1068
TauI	GCSGC	3 cut(s)	191, 324, 1618
TfiI	GAWTC	7 cut(s)	279, 399, 620, 1142, 1381, 1470, 1736
Tru1I	TTAA	4 cut(s)	522, 674, 695, 1400
Tru9I	TTAA	4 cut(s)	522, 674, 695, 1400
TseFI	GTSAC	2 cut(s)	19, 952
TseI	GCWGC	8 cut(s)	324, 757, 857, 887, 1343, 1448, 1529, 1687
Tsp45I	GTSAC	2 cut(s)	19, 952
TspDTI	ATGAA	3 cut(s)	578, 599, 893
TspGWI	ACGGA	1 cut(s)	108
VpaK11BI	GGWCC	1 cut(s)	1202
XagI	CCTNNNNNAGG	2 cut(s)	44, 287
XapI	RAATTY	2 cut(s)	677, 722
XceI	RCATGY	2 cut(s)	145, 262
XmnI	GAANNNNTTC	1 cut(s)	1551
XspI	CTAG	5 cut(s)	69, 536, 1016, 1059, 1206
ZraI	GACGTC	1 cut(s)	16
Zsp2I	ATGCAT	2 cut(s)	691, 1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.