pycom01g14670

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0006066
Physical Location & Seq
Reverse (-)
14749994 .. 14752481
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2181 bp
ATGGAAGCTACAGGTACACCAAGTGTTATGGAAAAACTGATGGGTCTTAATGACTTGCCGCCTCAGGCGCCTGTCCAAAAACAAAGAAGAGTGCTGTCTGAGAATTACCTGCGCAGAGTTGCTTCCATTGGTGCCAGAGAGTCTCGTCATTCGTTCAGGTTGAGTGTACCGGAAATTATGGATTATGAGGGTGATTATGTCGCAGCATGCCTCCCGAGGGGCAGTTCTTTGATCAGCGAGCATCGGCATAATCTGCAGGTTTCCCCTTCGACATGTACTTCTGGCAGTGGAAATGTTGATATATGCAGGAAATCTGGGAGGAGATATGAGCTGCCAAATGCCACTTTACTTGAGACGTTTGAGAATGGAATTGTCACAGAATCCCTTGGAGAAGTTGGACTCTTAAATTCAGATGATTTTTCAAGATCTCAATTGGGGGCGAACAAAGAAGGATGCATTCCAAGTAGTAGAATTGTTGTTTTGAAAGGGAAGCAAGGAAAGGCCGAGATTTCTGCGAGATGTTTCCCTTCTTTGAGTTCCCTTGATGATTCTCATTCCAGTGATCGAAAGTGCATGGAGTATTCTAGTCCTGGTAGTGGGAAACTACATGTTGAAGTAAAAGAAAGGAAGAACTTGACATTTGACATGGAACCAGTAAGCTTAAGGTCTACAGTTTTGATTGAAATATTGGGGAAGCTAACTGAAAATACAAGTTGCAACAAAACCAACATTGATGCAACGGTATCACGGTTAGGATCCAGAGGTGGCAACTCAGTTGCAATGAAAACTGAATCGATGAGGCTGTCTTCCTCGAGATACCAGTCATTTTCTTATTCAGATGAGTCATTTGTATACCGGGAAGCCAAAAAGCAACTCTCAGAACGACGGAAGATGATTAATAAGCTGGAAGAAGCAGGAATGGCTCGTAAAGGCGCTACCATCTGGAATTCGCTTGCCATGTCTGCCCACGAAACAGGCTCAAGAACATTGGATGACAGTCTCGTTAGGCATCTTCAACCAAAAAGAAAGCTCGTTAGGGATGACGTGAAAGACCTAGAACTCAGTAAGTTTACAACACAGCAAGATAAATATGCAGCTCTTTGCAATGAGTGGAGTTTCAAGCCAAAAGGGTCAATTAATTTGGGGCAGCACAAGTCAAGGGAGTACAAATTCAACCAGAATGATGGTTTCGGACCCATAAAGTTGAGATCCAACCGTAAGAAACTCCACTATTATCCAAGCTTAGAATTCAAAGGTGTTCACACTGTGGAAAAAACTTCCGGAAATTTCAAGAAGCAGCAATCTGGACGCATAGCCGGCATTTTTGTTTACAAAAATGACAATTCTTCCAGTCATGGCACAGATGCTTCAGTTCAAAAGGAAACATCCACTGAAGACAAAAAAGAAAGTCCATTTCTTTTGCACTGCTCCACCACAGGGTCAGATTGTATGGTGAGCTTGGAGGAAGCTGATAAGCCTAGTCCAGTTTCAGTTCTGGAACCAATATTTAGTGGAGAGCGGTCGCCTACACCAGAATTCCCGCGAAGGATGAATGTTGACATCACAGACTACTCTGACACATACTCCGAAGGATCTGGAATGATCGTTTCAAGTGACGATGATGATGATACTATTCAAGGATCTGCAAGCAGTTACAGAGAAAATGAAGATTCAATGAGATTGTTCAGGGTTGAAGAAAGTAGAGACTATTCCTACCTTGTTGATGTGTTATCGGAGATAGGTTTTTATGGTAGGAACTCAACGATGGACTTAGGCACCTGGGGCCCTCCGGAATGGCCACTAAGCCTTGCTGTCTTTGAGACCCTGGAGAAGAAGTTTGGTGATCAGGCATCATGGAAAAGGTCGGACATGAGGCTTTTGTTTGACCGTATAAATGCAACGTTGATGGAGATTTTCGAGCCTTGTATGGGTGTTCCCACGTGGACAAAGCCCATATCTAGAAGGATTAGATCCACGCCAAGTGAGGAGATGATAGAGGAAGATCTATGGATGTTGCTTGTTAGCCAAGAGAAGGAAAAAGGTAAGGACTCCACTGAAAAGGCGCTAGGAAGGGAGATTGAGTTAGATTTAGGTAATGATATTGATGTTATTGGTAGAGAAATTGAGAGATTTTTGTTCGATAAGCTCATAGTGGAGTTTGTTACCATGGAGAGTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

727

Amino Acids

81.69

Weight (kDa)

5.92

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 569 - 719 6.7e-26 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 113
Acc36I ACCTGC 2 cut(s) 117, 247
AccB1I GGYRCC 3 cut(s) 67, 131, 1775
AccBSI CCGCTC 1 cut(s) 1519
AccI GTMKAC 2 cut(s) 668, 852
AccII CGCG 1 cut(s) 1543
AccIII TCCGGA 2 cut(s) 1280, 1789
AciI CCGC 3 cut(s) 59, 1519, 1541
AclI AACGTT 1 cut(s) 1901
AclWI GGATC 6 cut(s) 750, 763, 1203, 1600, 1648, 1965
AcoI YGGCCR 1 cut(s) 1796
AcsI RAATTY 6 cut(s) 406, 946, 1169, 1247, 1285, 1535
AcuI CTGAAG 2 cut(s) 1353, 1413
AcvI CACGTG 1 cut(s) 1941
AcyI GRCGYC 1 cut(s) 68
AdeI CACNNNGTG 2 cut(s) 23, 1267
AfaI GTAC 4 cut(s) 16, 168, 277, 1166
AfiI CCNNNNNNNGG 5 cut(s) 217, 596, 1437, 1928, 2032
AflII CTTAAG 1 cut(s) 661
AflIII ACRYGT 2 cut(s) 272, 607
AjiI CACGTC 1 cut(s) 1045
AjnI CCWGG 3 cut(s) 589, 1778, 1824
Alw26I GTCTC 5 cut(s) 147, 347, 1004, 1698, 1814
AlwI GGATC 6 cut(s) 750, 763, 1203, 1600, 1648, 1965
Ama87I CYCGRG 2 cut(s) 214, 811
Aor13HI TCCGGA 2 cut(s) 1280, 1789
AoxI GGCC 3 cut(s) 501, 1783, 1796
ApaI GGGCCC 1 cut(s) 1787
ApeKI GCWGC 5 cut(s) 203, 331, 1094, 1147, 1297
ApoI RAATTY 6 cut(s) 406, 946, 1169, 1247, 1285, 1535
AseI ATTAAT 2 cut(s) 897, 1137
AspLEI GCGC 4 cut(s) 70, 114, 935, 2065
AspS9I GGNCC 3 cut(s) 1193, 1783, 1784
AsuC2I CCSGG 1 cut(s) 857
AsuHPI GGTGA 3 cut(s) 203, 1465, 1853
AvaI CYCGRG 2 cut(s) 214, 811
AvaII GGWCC 1 cut(s) 1193
AxyI CCTNAGG 1 cut(s) 63
BaeGI GKGCMC 1 cut(s) 1787
BalI TGGCCA 1 cut(s) 1798
BamHI GGATCC 1 cut(s) 755
BanI GGYRCC 3 cut(s) 67, 131, 1775
BanII GRGCYC 1 cut(s) 1787
BbrPI CACGTG 1 cut(s) 1941
BbsI GAAGAC 2 cut(s) 798, 1401
BbvI GCAGC 5 cut(s) 215, 318, 1106, 1159, 1309
BccI CCATC 5 cut(s) 34, 947, 1178, 1759, 1900
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 3 cut(s) 591, 1780, 1826
BclI TGATCA 2 cut(s) 231, 1843
BcnI CCSGG 1 cut(s) 857
BcoDI GTCTC 5 cut(s) 147, 347, 1004, 1698, 1814
BfaI CTAG 5 cut(s) 585, 1055, 1479, 1959, 2066
BfmI CTRYAG 3 cut(s) 9, 254, 669
BfoI RGCGCY 3 cut(s) 71, 936, 2066
BfrI CTTAAG 1 cut(s) 661
BfuAI ACCTGC 2 cut(s) 117, 247
BglII AGATCT 2 cut(s) 425, 2002
BisI GCNGC 6 cut(s) 59, 204, 332, 1095, 1148, 1298
BlsI GCNGC 6 cut(s) 60, 205, 333, 1096, 1149, 1299
Bme1390I CCNGG 4 cut(s) 591, 857, 1780, 1826
Bme18I GGWCC 1 cut(s) 1193
BmeT110I CYCGRG 2 cut(s) 214, 811
BmgBI CACGTC 1 cut(s) 1045
BmgT120I GGNCC 3 cut(s) 1193, 1783, 1784
BmiI GGNNCC 9 cut(s) 69, 133, 651, 757, 1195, 1500, 1777, 1784, 1785
BmrFI CCNGG 4 cut(s) 591, 857, 1780, 1826
BmsI GCATC 6 cut(s) 250, 443, 724, 1018, 1354, 1859
BpiI GAAGAC 2 cut(s) 798, 1401
BpmI CTGGAG 1 cut(s) 1847
BpuEI CTTGAG 2 cut(s) 371, 964
BpuMI CCSGG 1 cut(s) 857
Bsa29I ATCGAT 1 cut(s) 794
BsaAI YACGTR 1 cut(s) 1941
BsaHI GRCGYC 1 cut(s) 68
BsaI GGTCTC 1 cut(s) 1814
BsaJI CCNNGG 5 cut(s) 215, 385, 1779, 1824, 2166
BsaWI WCCGGW 3 cut(s) 169, 1280, 1789
BsaXI ACNNNNNCTCC 6 cut(s) 1568, 1598, 1820, 1850, 2066, 2096
Bsc4I CCNNNNNNNGG 5 cut(s) 217, 596, 1437, 1928, 2032
Bse118I RCCGGY 1 cut(s) 1316
Bse1I ACTGG 5 cut(s) 558, 653, 820, 1350, 1484
Bse21I CCTNAGG 1 cut(s) 63
Bse3DI GCAATG 2 cut(s) 786, 1111
BseAI TCCGGA 2 cut(s) 1280, 1789
BseBI CCWGG 3 cut(s) 591, 1780, 1826
BseCI ATCGAT 1 cut(s) 794
BseDI CCNNGG 5 cut(s) 215, 385, 1779, 1824, 2166
BseGI GGATG 6 cut(s) 458, 997, 1045, 1385, 1554, 2016
BseLI CCNNNNNNNGG 5 cut(s) 217, 596, 1437, 1928, 2032
BseMI GCAATG 2 cut(s) 786, 1111
BseMII CTCAG 5 cut(s) 77, 90, 786, 891, 1075
BseNI ACTGG 5 cut(s) 558, 653, 820, 1350, 1484
BseRI GAGGAG 2 cut(s) 334, 2000
BseSI GKGCMC 1 cut(s) 1787
BseXI GCAGC 5 cut(s) 215, 318, 1106, 1159, 1309
Bsh1236I CGCG 1 cut(s) 1543
Bsh1285I CGRYCG 1 cut(s) 1523
BshFI GGCC 3 cut(s) 503, 1785, 1798
BshNI GGYRCC 3 cut(s) 67, 131, 1775
BshVI ATCGAT 1 cut(s) 794
BsiEI CGRYCG 1 cut(s) 1523
BsiHKCI CYCGRG 2 cut(s) 214, 811
BsiSI CCGG 5 cut(s) 170, 856, 1281, 1317, 1790
BslI CCNNNNNNNGG 5 cut(s) 217, 596, 1437, 1928, 2032
BsmAI GTCTC 5 cut(s) 147, 347, 1004, 1698, 1814
BsmBI CGTCTC 1 cut(s) 347
BsmI GAATGC 1 cut(s) 456
BsnI GGCC 3 cut(s) 503, 1785, 1798
Bso31I GGTCTC 1 cut(s) 1814
BsoBI CYCGRG 2 cut(s) 214, 811
Bsp120I GGGCCC 1 cut(s) 1783
Bsp1286I GDGCHC 1 cut(s) 1787
Bsp13I TCCGGA 2 cut(s) 1280, 1789
Bsp19I CCATGG 1 cut(s) 2166
BspACI CCGC 3 cut(s) 59, 1519, 1541
BspANI GGCC 3 cut(s) 503, 1785, 1798
BspCNI CTCAG 5 cut(s) 76, 91, 785, 890, 1074
BspDI ATCGAT 1 cut(s) 794
BspEI TCCGGA 2 cut(s) 1280, 1789
BspFNI CGCG 1 cut(s) 1543
BspLI GGNNCC 9 cut(s) 69, 133, 651, 757, 1195, 1500, 1777, 1784, 1785
BspMAI CTGCAG 1 cut(s) 258
BspMI ACCTGC 2 cut(s) 117, 247
BspPI GGATC 6 cut(s) 750, 763, 1203, 1600, 1648, 1965
BspT107I GGYRCC 3 cut(s) 67, 131, 1775
BspTI CTTAAG 1 cut(s) 661
BspTNI GGTCTC 1 cut(s) 1814
BsrBI CCGCTC 1 cut(s) 1519
BsrDI GCAATG 2 cut(s) 786, 1111
BsrFI RCCGGY 1 cut(s) 1316
BsrI ACTGG 5 cut(s) 558, 653, 820, 1350, 1484
BssAI RCCGGY 1 cut(s) 1316
BssECI CCNNGG 5 cut(s) 215, 385, 1779, 1824, 2166
BssNAI GTATAC 1 cut(s) 853
BssNI GRCGYC 1 cut(s) 68
BssT1I CCWWGG 2 cut(s) 385, 2166
Bst1107I GTATAC 1 cut(s) 853
Bst2UI CCWGG 3 cut(s) 591, 1780, 1826
Bst4CI ACNGT 7 cut(s) 673, 742, 750, 998, 1217, 1267, 1889
Bst6I CTCTTC 1 cut(s) 82
BstACI GRCGYC 1 cut(s) 68
BstAFI CTTAAG 1 cut(s) 661
BstAPI GCANNNNNTGC 1 cut(s) 253
BstBAI YACGTR 1 cut(s) 1941
BstC8I GCNNGC 5 cut(s) 208, 239, 954, 1318, 1648
BstDEI CTNAG 8 cut(s) 63, 99, 772, 877, 1061, 1243, 1771, 1802
BstDSI CCRYGG 1 cut(s) 2166
BstF5I GGATG 6 cut(s) 458, 997, 1045, 1385, 1554, 2016
BstFNI CGCG 1 cut(s) 1543
BstH2I RGCGCY 3 cut(s) 71, 936, 2066
BstHHI GCGC 4 cut(s) 70, 114, 935, 2065
BstMAI GTCTC 5 cut(s) 147, 347, 1004, 1698, 1814
BstMCI CGRYCG 1 cut(s) 1523
BstMWI GCNNNNNNNGC 6 cut(s) 67, 253, 920, 962, 1317, 1782
BstNI CCWGG 3 cut(s) 591, 1780, 1826
BstNSI RCATGY 3 cut(s) 210, 276, 611
BstSCI CCNGG 4 cut(s) 589, 855, 1778, 1824
BstSFI CTRYAG 3 cut(s) 9, 254, 669
BstSLI GKGCMC 1 cut(s) 1787
BstUI CGCG 1 cut(s) 1543
BstV1I GCAGC 5 cut(s) 215, 318, 1106, 1159, 1309
BstV2I GAAGAC 2 cut(s) 798, 1401
BstX2I RGATCY 7 cut(s) 425, 755, 1208, 1592, 1640, 1970, 2002
BstXI CCANNNNNNTGG 1 cut(s) 1184
BstYI RGATCY 7 cut(s) 425, 755, 1208, 1592, 1640, 1970, 2002
BstZ17I GTATAC 1 cut(s) 853
Bsu15I ATCGAT 1 cut(s) 794
Bsu36I CCTNAGG 1 cut(s) 63
BsuRI GGCC 3 cut(s) 503, 1785, 1798
BsuTUI ATCGAT 1 cut(s) 794
BtgI CCRYGG 1 cut(s) 2166
BtrI CACGTC 1 cut(s) 1045
BtsCI GGATG 6 cut(s) 458, 997, 1045, 1385, 1554, 2016
BtsI GCAGTG 2 cut(s) 292, 1423
BtsIMutI CAGTG 6 cut(s) 292, 565, 1263, 1389, 1423, 2052
BveI ACCTGC 2 cut(s) 117, 247
Cac8I GCNNGC 5 cut(s) 208, 239, 954, 1318, 1648
CfoI GCGC 4 cut(s) 70, 114, 935, 2065
Cfr10I RCCGGY 1 cut(s) 1316
Cfr13I GGNCC 3 cut(s) 1193, 1783, 1784
ClaI ATCGAT 1 cut(s) 794
CseI GACGC 1 cut(s) 1317
Csp6I GTAC 4 cut(s) 15, 167, 276, 1165
CspCI CAANNNNNGTGG 2 cut(s) 331, 366
CviQI GTAC 4 cut(s) 15, 167, 276, 1165
DdeI CTNAG 8 cut(s) 63, 99, 772, 877, 1061, 1243, 1771, 1802
DinI GGCGCC 1 cut(s) 69
DraIII CACNNNGTG 2 cut(s) 23, 1267
EaeI YGGCCR 1 cut(s) 1796
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
Eco130I CCWWGG 2 cut(s) 385, 2166
Eco24I GRGCYC 1 cut(s) 1787
Eco31I GGTCTC 1 cut(s) 1814
Eco47I GGWCC 1 cut(s) 1193
Eco57I CTGAAG 2 cut(s) 1353, 1413
Eco72I CACGTG 1 cut(s) 1941
Eco81I CCTNAGG 1 cut(s) 63
Eco88I CYCGRG 2 cut(s) 214, 811
EcoO109I RGGNCCY 2 cut(s) 1783, 1784
EcoRI GAATTC 3 cut(s) 946, 1247, 1535
EcoRII CCWGG 3 cut(s) 589, 1778, 1824
EcoT14I CCWWGG 2 cut(s) 385, 2166
EcoT22I ATGCAT 1 cut(s) 458
EcoT38I GRGCYC 1 cut(s) 1787
EgeI GGCGCC 1 cut(s) 69
EheI GGCGCC 1 cut(s) 69
ErhI CCWWGG 2 cut(s) 385, 2166
Esp3I CGTCTC 1 cut(s) 347
FauI CCCGC 1 cut(s) 1548
FbaI TGATCA 2 cut(s) 231, 1843
FblI GTMKAC 2 cut(s) 668, 852
Fnu4HI GCNGC 6 cut(s) 59, 204, 332, 1095, 1148, 1298
FokI GGATG 6 cut(s) 465, 1004, 1052, 1372, 1561, 2023
FriOI GRGCYC 1 cut(s) 1787
Fsp4HI GCNGC 6 cut(s) 59, 204, 332, 1095, 1148, 1298
FspBI CTAG 5 cut(s) 585, 1055, 1479, 1959, 2066
FspI TGCGCA 1 cut(s) 113
GlaI GCGC 4 cut(s) 69, 113, 934, 2064
GluI GCNGC 6 cut(s) 59, 204, 332, 1095, 1148, 1298
GsuI CTGGAG 1 cut(s) 1847
HaeII RGCGCY 3 cut(s) 71, 936, 2066
HaeIII GGCC 3 cut(s) 503, 1785, 1798
HapII CCGG 5 cut(s) 170, 856, 1281, 1317, 1790
HgaI GACGC 1 cut(s) 1317
HhaI GCGC 4 cut(s) 70, 114, 935, 2065
Hin1I GRCGYC 1 cut(s) 68
Hin6I GCGC 4 cut(s) 68, 112, 933, 2063
HinP1I GCGC 4 cut(s) 68, 112, 933, 2063
HincII GTYRAC 1 cut(s) 1558
HindII GTYRAC 1 cut(s) 1558
HindIII AAGCTT 2 cut(s) 658, 1240
HinfI GANTC 8 cut(s) 140, 380, 399, 548, 791, 842, 1670, 2048
HpaII CCGG 5 cut(s) 170, 856, 1281, 1317, 1790
HphI GGTGA 3 cut(s) 203, 1465, 1853
Hpy166II GTNNAC 9 cut(s) 17, 167, 669, 853, 1071, 1261, 1330, 1558, 1944
Hpy8I GTNNAC 9 cut(s) 17, 167, 669, 853, 1071, 1261, 1330, 1558, 1944
Hpy99I CGWCG 1 cut(s) 888
HpyAV CCTTC 8 cut(s) 276, 443, 537, 1539, 1583, 1956, 2026, 2064
HpyCH4III ACNGT 7 cut(s) 673, 742, 750, 998, 1217, 1267, 1889
HpyCH4IV ACGT 4 cut(s) 356, 1044, 1901, 1940
HpyF10VI GCNNNNNNNGC 6 cut(s) 67, 253, 920, 962, 1317, 1782
HpyF3I CTNAG 8 cut(s) 63, 99, 772, 877, 1061, 1243, 1771, 1802
HpySE526I ACGT 4 cut(s) 356, 1044, 1901, 1940
Hsp92I GRCGYC 1 cut(s) 68
HspAI GCGC 4 cut(s) 68, 112, 933, 2063
KasI GGCGCC 1 cut(s) 67
Kpn2I TCCGGA 2 cut(s) 1280, 1789
KroI GCCGGC 1 cut(s) 1316
KroNI GCCGGC 1 cut(s) 1318
Ksp22I TGATCA 2 cut(s) 231, 1843
LmnI GCTCC 1 cut(s) 1433
Lsp1109I GCAGC 5 cut(s) 215, 318, 1106, 1159, 1309
LweI GCATC 6 cut(s) 250, 443, 724, 1018, 1354, 1859
MaeI CTAG 5 cut(s) 585, 1055, 1479, 1959, 2066
MaeII ACGT 4 cut(s) 356, 1044, 1901, 1940
MaeIII GTNAC 4 cut(s) 373, 1613, 1652, 2161
MbiI CCGCTC 1 cut(s) 1519
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 7 cut(s) 425, 755, 1208, 1592, 1640, 1970, 2002
MhlI GDGCHC 1 cut(s) 1787
MlsI TGGCCA 1 cut(s) 1798
MluNI TGGCCA 1 cut(s) 1798
Mly113I GGCGCC 1 cut(s) 68
MlyI GAGTC 4 cut(s) 149, 393, 851, 2042
MmeI TCCRAC 3 cut(s) 376, 1236, 1845
Mox20I TGGCCA 1 cut(s) 1798
Mph1103I ATGCAT 1 cut(s) 458
MroI TCCGGA 2 cut(s) 1280, 1789
MroNI GCCGGC 1 cut(s) 1316
MscI TGGCCA 1 cut(s) 1798
MseI TTAA 6 cut(s) 48, 404, 662, 897, 1137, 2179
MslI CAYNNNNRTG 1 cut(s) 558
Msp20I TGGCCA 1 cut(s) 1798
MspCI CTTAAG 1 cut(s) 661
MspI CCGG 5 cut(s) 170, 856, 1281, 1317, 1790
MspR9I CCNGG 4 cut(s) 591, 857, 1780, 1826
MunI CAATTG 1 cut(s) 431
Mva1269I GAATGC 1 cut(s) 456
MvaI CCWGG 3 cut(s) 591, 1780, 1826
MvnI CGCG 1 cut(s) 1543
MwoI GCNNNNNNNGC 6 cut(s) 67, 253, 920, 962, 1317, 1782
NaeI GCCGGC 1 cut(s) 1318
NarI GGCGCC 1 cut(s) 68
NciI CCSGG 1 cut(s) 857
NcoI CCATGG 1 cut(s) 2166
NgoMIV GCCGGC 1 cut(s) 1316
NlaIV GGNNCC 9 cut(s) 69, 133, 651, 757, 1195, 1500, 1777, 1784, 1785
NmeAIII GCCGAG 1 cut(s) 529
NmuCI GTSAC 2 cut(s) 373, 1613
NsbI TGCGCA 1 cut(s) 113
NsiI ATGCAT 1 cut(s) 458
NspI RCATGY 3 cut(s) 210, 276, 611
PaeI GCATGC 1 cut(s) 210
PaeR7I CTCGAG 1 cut(s) 811
PciI ACATGT 2 cut(s) 272, 607
PctI GAATGC 1 cut(s) 456
PdiI GCCGGC 1 cut(s) 1318
PfeI GAWTC 4 cut(s) 380, 548, 791, 1670
PkrI GCNGC 6 cut(s) 60, 205, 333, 1096, 1149, 1299
PleI GAGTC 4 cut(s) 148, 393, 850, 2042
PluTI GGCGCC 1 cut(s) 71
PmaCI CACGTG 1 cut(s) 1941
PmlI CACGTG 1 cut(s) 1941
PpsI GAGTC 4 cut(s) 148, 393, 850, 2042
Ppu21I YACGTR 1 cut(s) 1941
PscI ACATGT 2 cut(s) 272, 607
PshBI ATTAAT 2 cut(s) 897, 1137
Psp1406I AACGTT 1 cut(s) 1901
Psp6I CCWGG 3 cut(s) 589, 1778, 1824
PspCI CACGTG 1 cut(s) 1941
PspGI CCWGG 3 cut(s) 589, 1778, 1824
PspN4I GGNNCC 9 cut(s) 69, 133, 651, 757, 1195, 1500, 1777, 1784, 1785
PspOMI GGGCCC 1 cut(s) 1783
PspPI GGNCC 3 cut(s) 1193, 1783, 1784
PstI CTGCAG 1 cut(s) 258
PsuI RGATCY 7 cut(s) 425, 755, 1208, 1592, 1640, 1970, 2002
RsaI GTAC 4 cut(s) 16, 168, 277, 1166
RsaNI GTAC 4 cut(s) 15, 167, 276, 1165
RseI CAYNNNNRTG 1 cut(s) 558
SaqAI TTAA 6 cut(s) 48, 404, 662, 897, 1137, 2179
SatI GCNGC 6 cut(s) 59, 204, 332, 1095, 1148, 1298
Sau96I GGNCC 3 cut(s) 1193, 1783, 1784
SchI GAGTC 4 cut(s) 149, 393, 851, 2042
ScrFI CCNGG 4 cut(s) 591, 857, 1780, 1826
SduI GDGCHC 1 cut(s) 1787
SfaNI GCATC 6 cut(s) 250, 443, 724, 1018, 1354, 1859
SfcI CTRYAG 3 cut(s) 9, 254, 669
SfoI GGCGCC 1 cut(s) 69
Sfr274I CTCGAG 1 cut(s) 811
SinI GGWCC 1 cut(s) 1193
SlaI CTCGAG 1 cut(s) 811
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 4 cut(s) 350, 661, 811, 979
SmoI CTYRAG 4 cut(s) 350, 661, 811, 979
SphI GCATGC 1 cut(s) 210
SsiI CCGC 3 cut(s) 59, 1519, 1541
SspDI GGCGCC 1 cut(s) 67
SspI AATATT 2 cut(s) 687, 1506
SspMI CTAG 5 cut(s) 585, 1055, 1479, 1959, 2066
StyD4I CCNGG 4 cut(s) 589, 855, 1778, 1824
StyI CCWWGG 2 cut(s) 385, 2166
TaaI ACNGT 7 cut(s) 673, 742, 750, 998, 1217, 1267, 1889
TaiI ACGT 4 cut(s) 359, 1047, 1904, 1943
TaqI TCGA 6 cut(s) 269, 565, 794, 812, 1917, 2139
TatI WGTACW 2 cut(s) 275, 1164
TauI GCSGC 1 cut(s) 61
TfiI GAWTC 4 cut(s) 380, 548, 791, 1670
Tru1I TTAA 6 cut(s) 48, 404, 662, 897, 1137, 2179
Tru9I TTAA 6 cut(s) 48, 404, 662, 897, 1137, 2179
TscAI CASTG 6 cut(s) 292, 565, 1270, 1396, 1430, 2059
TseFI GTSAC 2 cut(s) 373, 1613
TseI GCWGC 5 cut(s) 203, 331, 1094, 1147, 1297
Tsp45I GTSAC 2 cut(s) 373, 1613
TspDTI ATGAA 3 cut(s) 797, 1565, 1680
TspGWI ACGGA 1 cut(s) 901
TspRI CASTG 6 cut(s) 292, 565, 1270, 1396, 1430, 2059
Vha464I CTTAAG 1 cut(s) 661
VpaK11BI GGWCC 1 cut(s) 1193
VspI ATTAAT 2 cut(s) 897, 1137
XapI RAATTY 6 cut(s) 406, 946, 1169, 1247, 1285, 1535
XbaI TCTAGA 1 cut(s) 1958
XceI RCATGY 3 cut(s) 210, 276, 611
XhoI CTCGAG 1 cut(s) 811
XmiI GTMKAC 2 cut(s) 668, 852
XspI CTAG 5 cut(s) 585, 1055, 1479, 1959, 2066
Zsp2I ATGCAT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.