Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0017717

Physical Location & Seq

Genomic Coordinates Forward (+)

16647192 .. 16649264

Gene Structure 2073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g17300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGAAGCAGCTCTTGTTCCTCCTCTAATGGTTTCCACAGGATTTTTGCCAACTGGGTCGTTGTTACAATCGTTGGTTCACATATGCAACGAAGTTTGCTCCATGGAAAAGCTTCCGGTTCTGCAGGGCCGCAACATCTCCACCATGGTAAGGAGGATCAAGCTTCTCGCTTTTCTGTTCGAAGAGATAAAAGAGTCCGCCGGGCCGCTTCCTCCCTCTTCAATCCTATGCCTCACGGAGCTTTTCTCCGTGATTCGAAGAGCCAAGTTTCTGATCCAAGATTGTAAAGACGGGAGCTCTCTGTGGGGGCTTATGCAGACGGAGTTGGTTTCGAATCAGTTTTACGGGCTGGTCAAGGAGTTGGGGAGGGCGCTTGATATTTTGCCTCTGAGCTTGCTTAACGTGACGGCAGATATCAAAGAGCAGATCGAGCTCCTCCACCGGCAAGCGAAAAGAGCGGAGCTTTTTATCGATCTCAAAGAGCTGAAGAGAAGAGAAGAGCTTTTGGTTTTGATGGGAAGCAATAGTGAGAAGAACAGGAAGAACAAAGATTTCATAGACTTGGTTAAAGTGAGAGATGTTCTGAGCAGCATTGGCCTGAGAAACACCGTGGATTACGAAGAAGAAACTTCGAAGCTCGAGGCAGAAGCTGACAAGCAAGCAGGGAGTGGAGGGCTGATTGTGGTGTCCAACATAAACAATCTTATTTCCCTTGTGTCGTACTGCAAAACCATCATTTTTATAGATGGTGAAATTGAAAAACCGTGTAAAGAGGATATGAAACTGCAGTGTGTCCCCTCGGGTAGATTTTATGATCACTCTTCATCTTCTCAGTCGTTGATCCCCAATGTTCCGGATGAATTTCGCTGCCCGATTTCATTGGACTTGATTAGAGACCCTGTTATTGTAGCATCCGGGCACACATACGATCGAAATTCGATTGCACAATGGATCAATTCGGGGCACCAGACATGTCCCAAAAGCGGGCAGAAGCTGATTCACATGGCGCTTATTCCCAACTATGCACTCAGGAGTCTAATACAACAATGGTGCGAGGAGAACAAAGTTCCCACAACTGAACCCTCGCAGTCTTCTTCCTCCGATTTGGCGAGGAGCAGCAGCAAAAGGGAGTTGTACGAAAATGCTGTCGATCACATTTCTGTAGTGAAAGCTGCTGTTGATGCTGTGAAATTGACAGCTGAGTTTCTGGTGGGAAAACTAGCAACTGGTTCACCTGATATCCAAAGGCAAGCGGCCTATGAGCTCCGATTACTTGCCAAAACCGGCATGAATAATAGGAGAATAATAGCAGAAGCAGGAGCTATTCCGTTTCTAGTGACGTTGCTGAGATGCCATGAACCGAGAATTCAGGAAAACGCTGTCACAGCGTTGCTCAACCTCTCCATCTACAACAACAACAAGATTCTGATCATGGCGGCTGGAGCAATTGACGAAATAGTAAACGTCTTGGAATCGGGGAACACAATGGAAGCACGAGAGAATGCAGCAGCAGCAATTTTCAGCTTGTCGATGATAGATGACTGCAAGGTAACGATTGGAAAGCGCCCCAGAGCCATTCCGGCATTGGTGGGGCTTTTGAAAGAAGGCACTCCGGCAGGTAAAAAAGATGCTGCCATAGCACTCTTCAATCTTGCACTCTACAATGCCAACAAGGTGAGTGTTGTGTTCGCCGGGGCGGTTCCTCTGCTCATCGAGCTGTTGATGGACGACAAGGCGGGAATTACAGATGATGCCTTGGCACTGCTTGCTCAGATTTTGGGTTGCTCTGAAGGACGGGAGGAGATTGGGAAGAGCAGGATTTTAGTGCATATTCTTATCGATCTCTTAAGATTTGGTTCTCCGAAAGGGAAGGAAAACGCGGTCACTCTTCTGTTGGGGTTGTGCAAAGACGGAGGAGAGGAGGTCGCACGACGGCTGTTGATGAACCCGCGGAGCATTCCTTCACTCCAAAGCTTGGCTGCAGACGGTTCCTTGAAAGCTCGAAGAAAAGCCGACACGCTGCTTCGATTACTGAACAGGTGCTGCTTCCAATCTCACCACCAGATTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002237 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009610 GO:0009617 GO:0009620 GO:0009877 GO:0009987 GO:0010033 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0036377 GO:0042221 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

691

Amino Acids

75.74

Weight (kDa)

7.49

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCAfunc	PF19584	43 - 150	3e-07	MCAfunc domain
PUB10_N	PF25368	46 - 153	7.1e-17	PUB10-like, N-terminal domain
U-box	PF04564	284 - 355	6.6e-22	U-box domain
ARM_PUB	PF25598	416 - 682	7.2e-24	Plant U-box protein ARM repeat region
Arm	PF00514	432 - 468	4.4e-09	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	432 - 661	7.3e-11	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017717)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g24820
malus_domestica	MD01G1156100.v1.1 MD07G1224800.v1.1
prunus_persica	Prupe.2G253400_v2.0.a1
pyrus_communis	pycom01g17300
rosa_chinensis	RchiOBHm_Chr1g0370691
rosa_laevigata	RLG00000027017
rosa_multiflora	Rmu_sc0004550.1_g000011
rosa_roxburghii	Rroxscaffold_4G00286300
rosa_rugosa	Rorug01G0358500
rosa_samantha	Rh1DG363200
rosa_wichuraiana	Rw1G032400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1607
AccB1I	GGYRCC	1 cut(s)	963
AccB7I	CCANNNNNTGG	1 cut(s)	1975
AccBSI	CCGCTC	1 cut(s)	458
AccII	CGCG	2 cut(s)	1880, 1951
AccIII	TCCGGA	1 cut(s)	853
AclWI	GGATC	4 cut(s)	164, 268, 835, 959
AcsI	RAATTY	3 cut(s)	860, 934, 1365
AcuI	CTGAAG	2 cut(s)	506, 1809
AfaI	GTAC	2 cut(s)	722, 1136
AfiI	CCNNNNNNNGG	4 cut(s)	150, 983, 984, 1975
AflII	CTTAAG	1 cut(s)	1846
AflIII	ACRYGT	1 cut(s)	971
AgsI	TTSAA	5 cut(s)	222, 758, 1600, 1648, 1996
Alw21I	GWGCWC	3 cut(s)	299, 435, 1266
Alw26I	GTCTC	1 cut(s)	888
AlwI	GGATC	4 cut(s)	164, 268, 835, 959
AlwNI	CAGNNNCTG	3 cut(s)	650, 994, 2043
Ama87I	CYCGRG	2 cut(s)	638, 799
Aor13HI	TCCGGA	1 cut(s)	853
AoxI	GGCC	4 cut(s)	127, 203, 595, 1254
ApoI	RAATTY	3 cut(s)	860, 934, 1365
ArsI	GACNNNNNNTTYG	2 cut(s)	1131, 1163
Asp700I	GAANNNNTTC	1 cut(s)	111
AspLEI	GCGC	3 cut(s)	373, 1009, 1566
AspS9I	GGNCC	2 cut(s)	127, 203
AsuC2I	CCSGG	3 cut(s)	202, 916, 1693
AsuHPI	GGTGA	4 cut(s)	761, 1224, 1687, 2048
AsuII	TTCGAA	4 cut(s)	180, 256, 332, 632
AvaI	CYCGRG	2 cut(s)	638, 799
BaeGI	GKGCMC	2 cut(s)	921, 966
BanI	GGYRCC	1 cut(s)	963
BanII	GRGCYC	3 cut(s)	299, 435, 1266
BauI	CACGAG	1 cut(s)	1494
BbsI	GAAGAC	1 cut(s)	1083
Bbv12I	GWGCWC	3 cut(s)	299, 435, 1266
BccI	CCATC	5 cut(s)	508, 740, 740, 1412, 1717
BceAI	ACGGC	2 cut(s)	423, 1949
BclI	TGATCA	2 cut(s)	814, 1428
BcnI	CCSGG	3 cut(s)	202, 916, 1693
BcoDI	GTCTC	1 cut(s)	888
BfaI	CTAG	2 cut(s)	1220, 1334
BfmI	CTRYAG	4 cut(s)	122, 785, 1161, 1980
BfoI	RGCGCY	3 cut(s)	374, 1010, 1567
BfrI	CTTAAG	1 cut(s)	1846
BfuAI	ACCTGC	1 cut(s)	1607
BglI	GCCNNNNNGGC	1 cut(s)	1580
Bme1390I	CCNGG	3 cut(s)	202, 916, 1693
BmeT110I	CYCGRG	2 cut(s)	638, 799
BmgT120I	GGNCC	2 cut(s)	127, 203
BmiI	GGNNCC	3 cut(s)	965, 1701, 1990
BmrFI	CCNGG	3 cut(s)	202, 916, 1693
BmrI	ACTGGG	1 cut(s)	63
BmsI	GCATC	5 cut(s)	920, 1171, 1340, 1618, 1741
BmuI	ACTGGG	1 cut(s)	63
BpiI	GAAGAC	1 cut(s)	1083
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	1 cut(s)	1461
Bpu14I	TTCGAA	4 cut(s)	180, 256, 332, 632
BpuMI	CCSGG	3 cut(s)	202, 916, 1693
Bsa29I	ATCGAT	2 cut(s)	471, 1839
BsaBI	GATNNNNATC	1 cut(s)	1427
BsaI	GGTCTC	1 cut(s)	888
BsaJI	CCNNGG	7 cut(s)	102, 144, 609, 798, 1692, 1755, 1949
BsaWI	WCCGGW	2 cut(s)	115, 853
BsaXI	ACNNNNNCTCC	2 cut(s)	1908, 1938
Bsc4I	CCNNNNNNNGG	4 cut(s)	150, 983, 984, 1975
Bse118I	RCCGGY	2 cut(s)	441, 1283
Bse1I	ACTGG	2 cut(s)	58, 1231
Bse8I	GATNNNNATC	1 cut(s)	1427
BseAI	TCCGGA	1 cut(s)	853
BseCI	ATCGAT	2 cut(s)	471, 1839
BseDI	CCNNGG	7 cut(s)	102, 144, 609, 798, 1692, 1755, 1949
BseGI	GGATG	2 cut(s)	862, 911
BseJI	GATNNNNATC	1 cut(s)	1427
BseLI	CCNNNNNNNGG	4 cut(s)	150, 983, 984, 1975
BseMII	CTCAG	8 cut(s)	380, 575, 590, 845, 1042, 1191, 1337, 1784
BseNI	ACTGG	2 cut(s)	58, 1231
BseRI	GAGGAG	7 cut(s)	12, 425, 1070, 1126, 1814, 1929, 1934
BseSI	GKGCMC	2 cut(s)	921, 966
Bsh1236I	CGCG	2 cut(s)	1880, 1951
Bsh1285I	CGRYCG	1 cut(s)	931
BshFI	GGCC	4 cut(s)	129, 205, 597, 1256
BshNI	GGYRCC	1 cut(s)	963
BshVI	ATCGAT	2 cut(s)	471, 1839
BsiEI	CGRYCG	1 cut(s)	931
BsiHKAI	GWGCWC	3 cut(s)	299, 435, 1266
BsiHKCI	CYCGRG	2 cut(s)	638, 799
BsiSI	CCGG	9 cut(s)	116, 201, 442, 854, 915, 1284, 1580, 1613, 1692
BslFI	GGGAC	2 cut(s)	779, 960
BslI	CCNNNNNNNGG	4 cut(s)	150, 983, 984, 1975
BsmAI	GTCTC	1 cut(s)	888
BsmFI	GGGAC	2 cut(s)	779, 960
BsmI	GAATGC	2 cut(s)	1507, 1956
BsnI	GGCC	4 cut(s)	129, 205, 597, 1256
Bso31I	GGTCTC	1 cut(s)	888
BsoBI	CYCGRG	2 cut(s)	638, 799
Bsp119I	TTCGAA	4 cut(s)	180, 256, 332, 632
Bsp1286I	GDGCHC	5 cut(s)	299, 435, 921, 966, 1266
Bsp13I	TCCGGA	1 cut(s)	853
Bsp19I	CCATGG	2 cut(s)	102, 144
BspANI	GGCC	4 cut(s)	129, 205, 597, 1256
BspCNI	CTCAG	8 cut(s)	381, 576, 591, 844, 1041, 1192, 1338, 1783
BspDI	ATCGAT	2 cut(s)	471, 1839
BspEI	TCCGGA	1 cut(s)	853
BspFNI	CGCG	2 cut(s)	1880, 1951
BspLI	GGNNCC	3 cut(s)	965, 1701, 1990
BspMAI	CTGCAG	3 cut(s)	126, 789, 1984
BspMI	ACCTGC	1 cut(s)	1607
BspPI	GGATC	4 cut(s)	164, 268, 835, 959
BspQI	GCTCTTC	3 cut(s)	253, 492, 1805
BspT104I	TTCGAA	4 cut(s)	180, 256, 332, 632
BspT107I	GGYRCC	1 cut(s)	963
BspTI	CTTAAG	1 cut(s)	1846
BspTNI	GGTCTC	1 cut(s)	888
BsrBI	CCGCTC	1 cut(s)	458
BsrFI	RCCGGY	2 cut(s)	441, 1283
BsrI	ACTGG	2 cut(s)	58, 1231
BssAI	RCCGGY	2 cut(s)	441, 1283
BssECI	CCNNGG	7 cut(s)	102, 144, 609, 798, 1692, 1755, 1949
BssSI	CACGAG	1 cut(s)	1494
BssT1I	CCWWGG	3 cut(s)	102, 144, 1755
Bst2BI	CACGAG	1 cut(s)	1494
Bst4CI	ACNGT	3 cut(s)	610, 765, 1988
BstAFI	CTTAAG	1 cut(s)	1846
BstAPI	GCANNNNNTGC	1 cut(s)	1766
BstBI	TTCGAA	4 cut(s)	180, 256, 332, 632
BstC8I	GCNNGC	6 cut(s)	395, 447, 660, 986, 1251, 1767
BstDEI	CTNAG	8 cut(s)	389, 584, 599, 831, 1028, 1200, 1346, 1770
BstDSI	CCRYGG	4 cut(s)	102, 144, 609, 1949
BstF5I	GGATG	2 cut(s)	862, 911
BstFNI	CGCG	2 cut(s)	1880, 1951
BstH2I	RGCGCY	3 cut(s)	374, 1010, 1567
BstHHI	GCGC	3 cut(s)	373, 1009, 1566
BstMAI	GTCTC	1 cut(s)	888
BstMCI	CGRYCG	1 cut(s)	931
BstNSI	RCATGY	1 cut(s)	975
BstSCI	CCNGG	3 cut(s)	200, 914, 1691
BstSFI	CTRYAG	4 cut(s)	122, 785, 1161, 1980
BstSLI	GKGCMC	2 cut(s)	921, 966
BstUI	CGCG	2 cut(s)	1880, 1951
BstV2I	GAAGAC	1 cut(s)	1083
BstXI	CCANNNNNNTGG	1 cut(s)	2066
Bsu15I	ATCGAT	2 cut(s)	471, 1839
BsuRI	GGCC	4 cut(s)	129, 205, 597, 1256
BsuTUI	ATCGAT	2 cut(s)	471, 1839
BtgI	CCRYGG	4 cut(s)	102, 144, 609, 1949
BtsCI	GGATG	2 cut(s)	862, 911
BtsI	GCAGTG	2 cut(s)	794, 1760
BtsIMutI	CAGTG	2 cut(s)	794, 1760
BveI	ACCTGC	1 cut(s)	1607
Cac8I	GCNNGC	6 cut(s)	395, 447, 660, 986, 1251, 1767
CaiI	CAGNNNCTG	3 cut(s)	650, 994, 2043
CfoI	GCGC	3 cut(s)	373, 1009, 1566
Cfr10I	RCCGGY	2 cut(s)	441, 1283
Cfr13I	GGNCC	2 cut(s)	127, 203
Cfr42I	CCGCGG	1 cut(s)	1952
ClaI	ATCGAT	2 cut(s)	471, 1839
Csp6I	GTAC	2 cut(s)	721, 1135
CviAII	CATG	7 cut(s)	103, 145, 972, 1003, 1288, 1355, 1432
CviQI	GTAC	2 cut(s)	721, 1135
DdeI	CTNAG	8 cut(s)	389, 584, 599, 831, 1028, 1200, 1346, 1770
EciI	GGCGGA	1 cut(s)	187
Ecl136II	GAGCTC	3 cut(s)	297, 433, 1264
Eco130I	CCWWGG	3 cut(s)	102, 144, 1755
Eco24I	GRGCYC	3 cut(s)	299, 435, 1266
Eco31I	GGTCTC	1 cut(s)	888
Eco32I	GATATC	2 cut(s)	415, 1240
Eco53kI	GAGCTC	3 cut(s)	297, 433, 1264
Eco57I	CTGAAG	2 cut(s)	506, 1809
Eco88I	CYCGRG	2 cut(s)	638, 799
EcoICRI	GAGCTC	3 cut(s)	297, 433, 1264
EcoRI	GAATTC	1 cut(s)	1365
EcoRV	GATATC	2 cut(s)	415, 1240
EcoT14I	CCWWGG	3 cut(s)	102, 144, 1755
EcoT38I	GRGCYC	3 cut(s)	299, 435, 1266
ErhI	CCWWGG	3 cut(s)	102, 144, 1755
FaeI	CATG	7 cut(s)	106, 148, 975, 1006, 1291, 1358, 1435
FalI	AAGNNNNNCTT	1 cut(s)	29
FaqI	GGGAC	2 cut(s)	779, 960
FatI	CATG	7 cut(s)	102, 144, 971, 1002, 1287, 1354, 1431
FauI	CCCGC	3 cut(s)	977, 1729, 1956
FauNDI	CATATG	1 cut(s)	83
FbaI	TGATCA	2 cut(s)	814, 1428
FokI	GGATG	2 cut(s)	869, 898
FriOI	GRGCYC	3 cut(s)	299, 435, 1266
FspBI	CTAG	2 cut(s)	1220, 1334
GlaI	GCGC	3 cut(s)	372, 1008, 1565
GsuI	CTGGAG	1 cut(s)	1461
HaeII	RGCGCY	3 cut(s)	374, 1010, 1567
HaeIII	GGCC	4 cut(s)	129, 205, 597, 1256
HapII	CCGG	9 cut(s)	116, 201, 442, 854, 915, 1284, 1580, 1613, 1692
HhaI	GCGC	3 cut(s)	373, 1009, 1566
Hin1II	CATG	7 cut(s)	106, 148, 975, 1006, 1291, 1358, 1435
Hin6I	GCGC	3 cut(s)	371, 1007, 1564
HinP1I	GCGC	3 cut(s)	371, 1007, 1564
HindIII	AAGCTT	3 cut(s)	110, 161, 1972
HinfI	GANTC	7 cut(s)	194, 253, 334, 997, 1033, 1423, 1472
HpaII	CCGG	9 cut(s)	116, 201, 442, 854, 915, 1284, 1580, 1613, 1692
HphI	GGTGA	4 cut(s)	761, 1224, 1687, 2048
Hpy166II	GTNNAC	3 cut(s)	79, 1232, 1462
Hpy188I	TCNGA	9 cut(s)	273, 390, 585, 1102, 1268, 1428, 1773, 1789, 1863
Hpy188III	TCNNGA	3 cut(s)	854, 1030, 1370
Hpy8I	GTNNAC	3 cut(s)	79, 1232, 1462
Hpy99I	CGWCG	1 cut(s)	1935
HpyAV	CCTTC	4 cut(s)	1598, 1784, 1864, 1971
HpyCH4III	ACNGT	3 cut(s)	610, 765, 1988
HpyCH4IV	ACGT	3 cut(s)	402, 1340, 1464
HpyF3I	CTNAG	8 cut(s)	389, 584, 599, 831, 1028, 1200, 1346, 1770
HpySE526I	ACGT	3 cut(s)	402, 1340, 1464
Hsp92II	CATG	7 cut(s)	106, 148, 975, 1006, 1291, 1358, 1435
HspAI	GCGC	3 cut(s)	371, 1007, 1564
Kpn2I	TCCGGA	1 cut(s)	853
Ksp22I	TGATCA	2 cut(s)	814, 1428
KspI	CCGCGG	1 cut(s)	1952
LguI	GCTCTTC	3 cut(s)	253, 492, 1805
LweI	GCATC	5 cut(s)	920, 1171, 1340, 1618, 1741
MaeI	CTAG	2 cut(s)	1220, 1334
MaeII	ACGT	3 cut(s)	402, 1340, 1464
MaeIII	GTNAC	6 cut(s)	63, 403, 1336, 1381, 1549, 1882
MbiI	CCGCTC	1 cut(s)	458
MfeI	CAATTG	1 cut(s)	1446
MhlI	GDGCHC	5 cut(s)	299, 435, 921, 966, 1266
MluCI	AATT	9 cut(s)	753, 860, 934, 955, 1190, 1365, 1446, 1515, 1740
MlyI	GAGTC	2 cut(s)	203, 1042
MmeI	TCCRAC	1 cut(s)	714
MroI	TCCGGA	1 cut(s)	853
MroXI	GAANNNNTTC	1 cut(s)	111
MseI	TTAA	3 cut(s)	399, 567, 1847
MspA1I	CMGCKG	2 cut(s)	1199, 1951
MspCI	CTTAAG	1 cut(s)	1846
MspI	CCGG	9 cut(s)	116, 201, 442, 854, 915, 1284, 1580, 1613, 1692
MspR9I	CCNGG	3 cut(s)	202, 916, 1693
MunI	CAATTG	1 cut(s)	1446
Mva1269I	GAATGC	2 cut(s)	1507, 1956
MvnI	CGCG	2 cut(s)	1880, 1951
NciI	CCSGG	3 cut(s)	202, 916, 1693
NcoI	CCATGG	2 cut(s)	102, 144
NdeI	CATATG	1 cut(s)	83
NlaIII	CATG	7 cut(s)	106, 148, 975, 1006, 1291, 1358, 1435
NlaIV	GGNNCC	3 cut(s)	965, 1701, 1990
NmuCI	GTSAC	4 cut(s)	403, 1336, 1381, 1882
NspI	RCATGY	1 cut(s)	975
NspV	TTCGAA	4 cut(s)	180, 256, 332, 632
PaeR7I	CTCGAG	1 cut(s)	638
PciI	ACATGT	1 cut(s)	971
PciSI	GCTCTTC	3 cut(s)	253, 492, 1805
PctI	GAATGC	2 cut(s)	1507, 1956
PdmI	GAANNNNTTC	1 cut(s)	111
PfeI	GAWTC	5 cut(s)	253, 334, 997, 1423, 1472
PflMI	CCANNNNNTGG	1 cut(s)	1975
Ple19I	CGATCG	1 cut(s)	931
PleI	GAGTC	2 cut(s)	202, 1041
PpsI	GAGTC	2 cut(s)	202, 1041
PscI	ACATGT	1 cut(s)	971
Psp124BI	GAGCTC	3 cut(s)	299, 435, 1266
PspN4I	GGNNCC	3 cut(s)	965, 1701, 1990
PspPI	GGNCC	2 cut(s)	127, 203
PspXI	VCTCGAGB	1 cut(s)	638
PstI	CTGCAG	3 cut(s)	126, 789, 1984
PstNI	CAGNNNCTG	3 cut(s)	650, 994, 2043
PvuI	CGATCG	1 cut(s)	931
PvuII	CAGCTG	1 cut(s)	1199
RsaI	GTAC	2 cut(s)	722, 1136
RsaNI	GTAC	2 cut(s)	721, 1135
SacI	GAGCTC	3 cut(s)	299, 435, 1266
SacII	CCGCGG	1 cut(s)	1952
SapI	GCTCTTC	3 cut(s)	253, 492, 1805
SaqAI	TTAA	3 cut(s)	399, 567, 1847
Sau96I	GGNCC	2 cut(s)	127, 203
SchI	GAGTC	2 cut(s)	203, 1042
ScrFI	CCNGG	3 cut(s)	202, 916, 1693
SduI	GDGCHC	5 cut(s)	299, 435, 921, 966, 1266
SfaNI	GCATC	5 cut(s)	920, 1171, 1340, 1618, 1741
SfcI	CTRYAG	4 cut(s)	122, 785, 1161, 1980
Sfr274I	CTCGAG	1 cut(s)	638
Sfr303I	CCGCGG	1 cut(s)	1952
SfuI	TTCGAA	4 cut(s)	180, 256, 332, 632
SgrBI	CCGCGG	1 cut(s)	1952
SlaI	CTCGAG	1 cut(s)	638
SmlI	CTYRAG	2 cut(s)	638, 1846
SmoI	CTYRAG	2 cut(s)	638, 1846
Sse9I	AATT	9 cut(s)	753, 860, 934, 955, 1190, 1365, 1446, 1515, 1740
SspMI	CTAG	2 cut(s)	1220, 1334
SstI	GAGCTC	3 cut(s)	299, 435, 1266
StyD4I	CCNGG	3 cut(s)	200, 914, 1691
StyI	CCWWGG	3 cut(s)	102, 144, 1755
TaaI	ACNGT	3 cut(s)	610, 765, 1988
TaiI	ACGT	3 cut(s)	405, 1343, 1467
TasI	AATT	9 cut(s)	753, 860, 934, 955, 1190, 1365, 1446, 1515, 1740
TauI	GCSGC	4 cut(s)	132, 208, 1256, 1439
TfiI	GAWTC	5 cut(s)	253, 334, 997, 1423, 1472
Tru1I	TTAA	3 cut(s)	399, 567, 1847
Tru9I	TTAA	3 cut(s)	399, 567, 1847
TscAI	CASTG	2 cut(s)	794, 1767
TseFI	GTSAC	4 cut(s)	403, 1336, 1381, 1882
Tsp45I	GTSAC	4 cut(s)	403, 1336, 1381, 1882
TspDTI	ATGAA	8 cut(s)	544, 794, 813, 867, 873, 1304, 1371, 1958
TspGWI	ACGGA	5 cut(s)	238, 251, 335, 1317, 1926
TspRI	CASTG	2 cut(s)	794, 1767
Van91I	CCANNNNNTGG	1 cut(s)	1975
Vha464I	CTTAAG	1 cut(s)	1846
XapI	RAATTY	3 cut(s)	860, 934, 1365
XceI	RCATGY	1 cut(s)	975
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1582
XhoI	CTCGAG	1 cut(s)	638
XmnI	GAANNNNTTC	1 cut(s)	111
XspI	CTAG	2 cut(s)	1220, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.