Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0017717

Physical Location & Seq

Genomic Coordinates Forward (+)

60680589 .. 60682657

Gene Structure 2069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G032400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGATGTGGCTCTAATTCCTCCAATGTTGGTTTCTTCAGGCTTTTTGCCTACTGGGTCATTCTTAGAGTCATTGATTCACATATGCAATGAGATTTGCTCCATGGAAAAGCTTCCTTTTCTTCAAGTCAGGAACATCTCCACCATGATAAGGAGGATTAAGCTTCTTTCTTCTTTGTTCGAAGAGATTCAAGAAACTAACGGCCCTCTCCCTCCATCTTCAATCCTGTGCCTCACCGAGCTCTTCTCCGTGATTCGAAGAATCAAGTTTTTGATTCAAGAGTGTAAGGACTGCAGCTTTTTGTGGGGACTTATGCAGATGGAGCTGGTTTCAAATCAGTTCTACGTGTTGGTCAAGGAGTTAGGGAGAGCACTTGATATTTTGCCTGTGAGTTTGCTCAATATTACGGCAGATATTAGAGAGCAGATTGAGCTTCTTCACCGGCAAGCGAAAAGGGCAGAGTTGTTTATTGACCTTAAAGAGGTGAAGAGAAGAGAAGAGCTTTTGGTATTGATGGGGAGCAACAATGAGAGGAACAAGAAGAACAAAGGGTTTGTAGACTTGGGCAAGGTGAAGGATATCTTGAGCAGCATTGGTTTGAGAAGCTCAATGGATTACGAGGAAGAGATTTCAAAGCTAGAGGCAGAAGCTCAAAAGCAAGCAGGGAGTGGCGGACTTATTGTGGTATGCAATATAAACAACCTCATCTCCCTTGTTTCATATTGCAAATCCATGATTTTCGTCTATGATGATTTCGAAACAACCAACAAGGAAGACTTCAAGCTGCTAGGTTCTACACCCTCAAATAGATATTATGATCACTCCTCATCTTCTCAATCCATAATTGCCAACATCCCAGATGAATTTCGATGCCCGATTTCACTAGACTTGATGAGAGATCCTGTGATAGTAGCATCGGGGCATACATATGATCGAAATTCCATTGCTCAGTGGATCAATTCAGGGCACCAAACATGCCCCAAAAGTGGACAGAAGCTTATTCACATGGCCCTTATACCTAACTATGCACTGAAGAGTCTGTTGCATCAATGGTGTGAGGAAAACAATGTTCCAGAAGTTGGATCATCACCATCATCTTCTTCAGATTTGGAGAGGAGCAGGAGCAAAAGAGATTCGTGTGAAAATGCTGTGGATCACATTTCTGTTGTAAAAGCTGCAGTTGATGCTGTGAAGTTAACAGCTGAGTTTCTGGTGGGAAAACTAGCAACAGGTTCACCAGATATCCAAAGACAAGCAGCATACGAGCTTCGGTTACTTGCTAAAACAGGCATGGATAACAGAAGAATAATAGCTGAAGCAGGAGCTATTCCTTTCTTAGTGACATTGCTGAGATCACATGATCCAAGAATTCAGGAAAATGCTGTCACCGCGCTACTCAACCTTTCCATCTTCAACAACAACAAAATTTTGATAATGGCTGCAGGAGCAATTGATTACATAATCGATGTGTTGGAATCAGGGAACACAATGGAAGCAAGAGAGAATGCAGCAGCAGCAATTTTCAGCTTCCATTCCGCATTGGTGGGGCTTTTGAAAGAAGGAACTCCGGCTGGTAAAAAGGACGCAGCCATTGCTCTCTTCAACCTTGCAGTCTACAATGCTAACAAGGTCAGTCTGGTGGTTGCCGGGGCGGTTCCCCTGCTCATTGATCTGTTGATGGATGACAAGGCGGGGATAACAGATGATGCCTTGGCAGTTCTTGCTCAACTTTTGGGATGCTCTGAAGGGTTGGAGGAGATTGGGAAGACTAGGGTTCTAGTGCCAATTCTCATTGATCTTCTGAGATTTGGTTCTCCAAAAGGGAAGGAGAATTCAATAACTCTTCTGTTGGGGTTGTGCAAAGATGGAGGAGAGGAGGTTGCAAGACGACTATTGATGAACCCGCGGAGTATCCCTTCTCTTCAAAGCTTGGTTGCTGATGGATCCTTGAAAGCTCGAAGAAAAGCCGATGCACTGCTTAGATTACTGAACAGATGCTGCTTTCAATCTCAGAATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002237 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009610 GO:0009617 GO:0009620 GO:0009877 GO:0009987 GO:0010033 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0036377 GO:0042221 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

673

Amino Acids

74.2

Weight (kDa)

6.15

Isoelectric Point (pI)

47.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCAfunc	PF19584	43 - 151	1.3e-06	MCAfunc domain
PUB10_N	PF25368	46 - 153	2.7e-15	PUB10-like, N-terminal domain
U-box	PF04564	285 - 356	4e-22	U-box domain
zf-Nse	PF11789	288 - 330	4.2e-06	Zinc-finger of the MIZ type in Nse subunit
zf-RING_UBOX	PF13445	291 - 327	5e-06	RING-type zinc-finger
Arm	PF00514	432 - 469	1.6e-10	Armadillo/beta-catenin-like repeat
ARM_PUB	PF25598	529 - 667	1.7e-11	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0017717)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g24820
malus_domestica	MD01G1156100.v1.1 MD07G1224800.v1.1
prunus_persica	Prupe.2G253400_v2.0.a1
pyrus_communis	pycom01g17300
rosa_chinensis	RchiOBHm_Chr1g0370691
rosa_laevigata	RLG00000027017
rosa_multiflora	Rmu_sc0004550.1_g000011
rosa_roxburghii	Rroxscaffold_4G00286300
rosa_rugosa	Rorug01G0358500
rosa_samantha	Rh1DG363200
rosa_wichuraiana	Rw1G032400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	966
AccB7I	CCANNNNNTGG	1 cut(s)	1079
AccI	GTMKAC	2 cut(s)	558, 1614
AccII	CGCG	2 cut(s)	1391, 1906
AciI	CCGC	7 cut(s)	672, 1389, 1536, 1652, 1691, 1904, 1906
AclWI	GGATC	7 cut(s)	893, 962, 1090, 1161, 1355, 1938, 1951
AcsI	RAATTY	5 cut(s)	863, 937, 1368, 1425, 1831
AcuI	CTGAAG	5 cut(s)	21, 1052, 1086, 1335, 1764
AfiI	CCNNNNNNNGG	4 cut(s)	150, 481, 986, 1079
AflIII	ACRYGT	1 cut(s)	345
AjuI	GAANNNNNNNTTGG	2 cut(s)	16, 48
Alw21I	GWGCWC	2 cut(s)	243, 373
AlwI	GGATC	7 cut(s)	893, 962, 1090, 1161, 1355, 1938, 1951
AlwNI	CAGNNNCTG	1 cut(s)	1998
AoxI	GGCC	2 cut(s)	202, 1008
ApoI	RAATTY	5 cut(s)	863, 937, 1368, 1425, 1831
Asp700I	GAANNNNTTC	2 cut(s)	111, 186
AspLEI	GCGC	1 cut(s)	1393
AspS9I	GGNCC	2 cut(s)	203, 1009
AsuC2I	CCSGG	1 cut(s)	1648
AsuHPI	GGTGA	7 cut(s)	226, 431, 496, 583, 1080, 1227, 1378
AsuII	TTCGAA	3 cut(s)	180, 256, 756
BaeGI	GKGCMC	1 cut(s)	969
BamHI	GGATCC	1 cut(s)	1943
BanI	GGYRCC	1 cut(s)	966
BanII	GRGCYC	1 cut(s)	243
BbsI	GAAGAC	2 cut(s)	780, 1772
Bbv12I	GWGCWC	2 cut(s)	243, 373
BccI	CCATC	8 cut(s)	223, 313, 508, 1099, 1415, 1672, 1859, 1934
BceAI	ACGGC	2 cut(s)	217, 423
BciVI	GTATCC	1 cut(s)	1922
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	1 cut(s)	1648
BfaI	CTAG	6 cut(s)	638, 788, 884, 1223, 1770, 1778
BfmI	CTRYAG	3 cut(s)	292, 1176, 1440
BfuI	GTATCC	1 cut(s)	1922
Bme1390I	CCNGG	1 cut(s)	1648
BmgT120I	GGNCC	2 cut(s)	203, 1009
BmiI	GGNNCC	3 cut(s)	968, 1656, 1945
BmrFI	CCNGG	1 cut(s)	1648
BmrI	ACTGGG	1 cut(s)	63
BmsI	GCATC	8 cut(s)	860, 923, 1054, 1174, 1696, 1727, 1960, 1985
BmuI	ACTGGG	1 cut(s)	63
BpiI	GAAGAC	2 cut(s)	780, 1772
BplI	GAGNNNNNCTC	4 cut(s)	83, 115, 230, 262
Bpu14I	TTCGAA	3 cut(s)	180, 256, 756
BpuEI	CTTGAG	1 cut(s)	604
BpuMI	CCSGG	1 cut(s)	1648
Bsa29I	ATCGAT	1 cut(s)	1464
BsaAI	YACGTR	1 cut(s)	346
BsaJI	CCNNGG	4 cut(s)	102, 1647, 1710, 1904
BsaXI	ACNNNNNCTCC	4 cut(s)	692, 722, 1863, 1893
Bsc4I	CCNNNNNNNGG	4 cut(s)	150, 481, 986, 1079
Bse118I	RCCGGY	1 cut(s)	441
Bse1I	ACTGG	1 cut(s)	58
Bse3DI	GCAATG	4 cut(s)	94, 942, 1343, 1590
BseCI	ATCGAT	1 cut(s)	1464
BseDI	CCNNGG	4 cut(s)	102, 1647, 1710, 1904
BseGI	GGATG	4 cut(s)	10, 852, 1687, 1742
BseLI	CCNNNNNNNGG	4 cut(s)	150, 481, 986, 1079
BseMI	GCAATG	4 cut(s)	94, 942, 1343, 1590
BseMII	CTCAG	4 cut(s)	962, 1194, 1340, 1793
BseNI	ACTGG	1 cut(s)	58
BseRI	GAGGAG	5 cut(s)	814, 1129, 1769, 1884, 1889
BseSI	GKGCMC	1 cut(s)	969
Bsh1236I	CGCG	2 cut(s)	1391, 1906
BshFI	GGCC	2 cut(s)	204, 1010
BshNI	GGYRCC	1 cut(s)	966
BshVI	ATCGAT	1 cut(s)	1464
BsiHKAI	GWGCWC	2 cut(s)	243, 373
BsiSI	CCGG	3 cut(s)	442, 1568, 1647
BslFI	GGGAC	1 cut(s)	321
BslI	CCNNNNNNNGG	4 cut(s)	150, 481, 986, 1079
BsmFI	GGGAC	1 cut(s)	321
BsmI	GAATGC	1 cut(s)	1510
BsnI	GGCC	2 cut(s)	204, 1010
Bsp119I	TTCGAA	3 cut(s)	180, 256, 756
Bsp1286I	GDGCHC	3 cut(s)	243, 373, 969
Bsp19I	CCATGG	1 cut(s)	102
BspACI	CCGC	7 cut(s)	672, 1389, 1536, 1652, 1691, 1904, 1906
BspANI	GGCC	2 cut(s)	204, 1010
BspCNI	CTCAG	4 cut(s)	961, 1195, 1341, 1794
BspDI	ATCGAT	1 cut(s)	1464
BspFNI	CGCG	2 cut(s)	1391, 1906
BspLI	GGNNCC	3 cut(s)	968, 1656, 1945
BspMAI	CTGCAG	3 cut(s)	296, 1180, 1444
BspPI	GGATC	7 cut(s)	893, 962, 1090, 1161, 1355, 1938, 1951
BspQI	GCTCTTC	2 cut(s)	248, 492
BspT104I	TTCGAA	3 cut(s)	180, 256, 756
BspT107I	GGYRCC	1 cut(s)	966
BsrDI	GCAATG	4 cut(s)	94, 942, 1343, 1590
BsrFI	RCCGGY	1 cut(s)	441
BsrI	ACTGG	1 cut(s)	58
BssAI	RCCGGY	1 cut(s)	441
BssECI	CCNNGG	4 cut(s)	102, 1647, 1710, 1904
BssT1I	CCWWGG	2 cut(s)	102, 1710
BstAPI	GCANNNNNTGC	3 cut(s)	1184, 1592, 1721
BstBAI	YACGTR	1 cut(s)	346
BstBI	TTCGAA	3 cut(s)	180, 256, 756
BstC8I	GCNNGC	2 cut(s)	447, 660
BstDEI	CTNAG	8 cut(s)	64, 948, 1203, 1336, 1349, 1802, 1979, 2010
BstDSI	CCRYGG	2 cut(s)	102, 1904
BstENI	CCTNNNNNAGG	1 cut(s)	479
BstF5I	GGATG	4 cut(s)	10, 852, 1687, 1742
BstFNI	CGCG	2 cut(s)	1391, 1906
BstHHI	GCGC	1 cut(s)	1393
BstMWI	GCNNNNNNNGC	9 cut(s)	322, 430, 455, 1184, 1388, 1445, 1514, 1592, 1721
BstNSI	RCATGY	1 cut(s)	978
BstSCI	CCNGG	1 cut(s)	1646
BstSFI	CTRYAG	3 cut(s)	292, 1176, 1440
BstSLI	GKGCMC	1 cut(s)	969
BstUI	CGCG	2 cut(s)	1391, 1906
BstV2I	GAAGAC	2 cut(s)	780, 1772
BstX2I	RGATCY	2 cut(s)	898, 1943
BstYI	RGATCY	2 cut(s)	898, 1943
Bsu15I	ATCGAT	1 cut(s)	1464
BsuI	GTATCC	1 cut(s)	1922
BsuRI	GGCC	2 cut(s)	204, 1010
BsuTUI	ATCGAT	1 cut(s)	1464
BtgI	CCRYGG	2 cut(s)	102, 1904
BtsCI	GGATG	4 cut(s)	10, 852, 1687, 1742
BtsI	GCAGTG	1 cut(s)	1973
BtsIMutI	CAGTG	3 cut(s)	956, 1028, 1973
Cac8I	GCNNGC	2 cut(s)	447, 660
CaiI	CAGNNNCTG	1 cut(s)	1998
CfoI	GCGC	1 cut(s)	1393
Cfr10I	RCCGGY	1 cut(s)	441
Cfr13I	GGNCC	2 cut(s)	203, 1009
Cfr42I	CCGCGG	1 cut(s)	1907
ClaI	ATCGAT	1 cut(s)	1464
CseI	GACGC	1 cut(s)	1592
CviAII	CATG	7 cut(s)	103, 145, 733, 975, 1006, 1291, 1358
DdeI	CTNAG	8 cut(s)	64, 948, 1203, 1336, 1349, 1802, 1979, 2010
EciI	GGCGGA	1 cut(s)	687
Ecl136II	GAGCTC	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	102, 1710
Eco24I	GRGCYC	1 cut(s)	243
Eco32I	GATATC	2 cut(s)	580, 1243
Eco53kI	GAGCTC	1 cut(s)	241
Eco57I	CTGAAG	5 cut(s)	21, 1052, 1086, 1335, 1764
EcoICRI	GAGCTC	1 cut(s)	241
EcoNI	CCTNNNNNAGG	1 cut(s)	479
EcoRI	GAATTC	2 cut(s)	1368, 1831
EcoRV	GATATC	2 cut(s)	580, 1243
EcoT14I	CCWWGG	2 cut(s)	102, 1710
EcoT38I	GRGCYC	1 cut(s)	243
ErhI	CCWWGG	2 cut(s)	102, 1710
FaeI	CATG	7 cut(s)	106, 148, 736, 978, 1009, 1294, 1361
FalI	AAGNNNNNCTT	4 cut(s)	566, 598, 761, 793
FaqI	GGGAC	1 cut(s)	321
FatI	CATG	7 cut(s)	102, 144, 732, 974, 1005, 1290, 1357
FauI	CCCGC	2 cut(s)	1684, 1911
FauNDI	CATATG	2 cut(s)	83, 928
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	2 cut(s)	558, 1614
FokI	GGATG	4 cut(s)	17, 839, 1694, 1749
FriOI	GRGCYC	1 cut(s)	243
FspBI	CTAG	6 cut(s)	638, 788, 884, 1223, 1770, 1778
GlaI	GCGC	1 cut(s)	1392
HaeIII	GGCC	2 cut(s)	204, 1010
HapII	CCGG	3 cut(s)	442, 1568, 1647
HgaI	GACGC	1 cut(s)	1592
HhaI	GCGC	1 cut(s)	1393
Hin1II	CATG	7 cut(s)	106, 148, 736, 978, 1009, 1294, 1361
Hin6I	GCGC	1 cut(s)	1391
HinP1I	GCGC	1 cut(s)	1391
HincII	GTYRAC	1 cut(s)	1197
HindII	GTYRAC	1 cut(s)	1197
HindIII	AAGCTT	4 cut(s)	110, 161, 995, 1927
HpaI	GTTAAC	1 cut(s)	1197
HpaII	CCGG	3 cut(s)	442, 1568, 1647
HphI	GGTGA	7 cut(s)	226, 431, 496, 583, 1080, 1227, 1378
Hpy166II	GTNNAC	5 cut(s)	559, 989, 1197, 1235, 1615
Hpy188I	TCNGA	4 cut(s)	1105, 1744, 1803, 2013
Hpy188III	TCNNGA	6 cut(s)	130, 191, 278, 583, 1073, 1373
Hpy8I	GTNNAC	5 cut(s)	559, 989, 1197, 1235, 1615
HpyAV	CCTTC	5 cut(s)	568, 1553, 1739, 1819, 1926
HpyCH4IV	ACGT	1 cut(s)	345
HpyF10VI	GCNNNNNNNGC	9 cut(s)	322, 430, 455, 1184, 1388, 1445, 1514, 1592, 1721
HpyF3I	CTNAG	8 cut(s)	64, 948, 1203, 1336, 1349, 1802, 1979, 2010
HpySE526I	ACGT	1 cut(s)	345
Hsp92II	CATG	7 cut(s)	106, 148, 736, 978, 1009, 1294, 1361
HspAI	GCGC	1 cut(s)	1391
Ksp22I	TGATCA	1 cut(s)	817
KspAI	GTTAAC	1 cut(s)	1197
KspI	CCGCGG	1 cut(s)	1907
LguI	GCTCTTC	2 cut(s)	248, 492
LmnI	GCTCC	7 cut(s)	104, 322, 519, 1116, 1122, 1322, 1445
LweI	GCATC	8 cut(s)	860, 923, 1054, 1174, 1696, 1727, 1960, 1985
MaeI	CTAG	6 cut(s)	638, 788, 884, 1223, 1770, 1778
MaeII	ACGT	1 cut(s)	345
MaeIII	GTNAC	3 cut(s)	1272, 1339, 1384
MfeI	CAATTG	1 cut(s)	1449
MflI	RGATCY	2 cut(s)	898, 1943
MhlI	GDGCHC	3 cut(s)	243, 373, 969
MlyI	GAGTC	2 cut(s)	77, 1045
MmeI	TCCRAC	3 cut(s)	1060, 1452, 1731
MroXI	GAANNNNTTC	2 cut(s)	111, 186
MseI	TTAA	3 cut(s)	159, 477, 1196
MslI	CAYNNNNRTG	1 cut(s)	927
MspA1I	CMGCKG	2 cut(s)	1202, 1906
MspI	CCGG	3 cut(s)	442, 1568, 1647
MspR9I	CCNGG	1 cut(s)	1648
MunI	CAATTG	1 cut(s)	1449
Mva1269I	GAATGC	1 cut(s)	1510
MvnI	CGCG	2 cut(s)	1391, 1906
MwoI	GCNNNNNNNGC	9 cut(s)	322, 430, 455, 1184, 1388, 1445, 1514, 1592, 1721
NciI	CCSGG	1 cut(s)	1648
NcoI	CCATGG	1 cut(s)	102
NdeI	CATATG	2 cut(s)	83, 928
NlaIII	CATG	7 cut(s)	106, 148, 736, 978, 1009, 1294, 1361
NlaIV	GGNNCC	3 cut(s)	968, 1656, 1945
NmuCI	GTSAC	2 cut(s)	1339, 1384
NspI	RCATGY	1 cut(s)	978
NspV	TTCGAA	3 cut(s)	180, 256, 756
PciSI	GCTCTTC	2 cut(s)	248, 492
PctI	GAATGC	1 cut(s)	1510
PdmI	GAANNNNTTC	2 cut(s)	111, 186
PfeI	GAWTC	8 cut(s)	76, 187, 253, 261, 274, 1133, 1475, 2014
PflMI	CCANNNNNTGG	1 cut(s)	1079
PleI	GAGTC	2 cut(s)	76, 1044
PpsI	GAGTC	2 cut(s)	76, 1044
Ppu21I	YACGTR	1 cut(s)	346
Psp124BI	GAGCTC	1 cut(s)	243
PspN4I	GGNNCC	3 cut(s)	968, 1656, 1945
PspPI	GGNCC	2 cut(s)	203, 1009
PstI	CTGCAG	3 cut(s)	296, 1180, 1444
PstNI	CAGNNNCTG	1 cut(s)	1998
PsuI	RGATCY	2 cut(s)	898, 1943
PvuII	CAGCTG	1 cut(s)	1202
RseI	CAYNNNNRTG	1 cut(s)	927
SacI	GAGCTC	1 cut(s)	243
SacII	CCGCGG	1 cut(s)	1907
SapI	GCTCTTC	2 cut(s)	248, 492
SaqAI	TTAA	3 cut(s)	159, 477, 1196
Sau96I	GGNCC	2 cut(s)	203, 1009
SchI	GAGTC	2 cut(s)	77, 1045
ScrFI	CCNGG	1 cut(s)	1648
SduI	GDGCHC	3 cut(s)	243, 373, 969
SfaNI	GCATC	8 cut(s)	860, 923, 1054, 1174, 1696, 1727, 1960, 1985
SfcI	CTRYAG	3 cut(s)	292, 1176, 1440
Sfr303I	CCGCGG	1 cut(s)	1907
SfuI	TTCGAA	3 cut(s)	180, 256, 756
SgrBI	CCGCGG	1 cut(s)	1907
SmiMI	CAYNNNNRTG	1 cut(s)	927
SmlI	CTYRAG	1 cut(s)	583
SmoI	CTYRAG	1 cut(s)	583
SsiI	CCGC	7 cut(s)	672, 1389, 1536, 1652, 1691, 1904, 1906
SspI	AATATT	1 cut(s)	403
SspMI	CTAG	6 cut(s)	638, 788, 884, 1223, 1770, 1778
SstI	GAGCTC	1 cut(s)	243
StyD4I	CCNGG	1 cut(s)	1646
StyI	CCWWGG	2 cut(s)	102, 1710
TaiI	ACGT	1 cut(s)	348
TaqI	TCGA	7 cut(s)	180, 256, 756, 868, 934, 1464, 1957
TfiI	GAWTC	8 cut(s)	76, 187, 253, 261, 274, 1133, 1475, 2014
Tru1I	TTAA	3 cut(s)	159, 477, 1196
Tru9I	TTAA	3 cut(s)	159, 477, 1196
TscAI	CASTG	3 cut(s)	956, 1035, 1980
TseFI	GTSAC	2 cut(s)	1339, 1384
Tsp45I	GTSAC	2 cut(s)	1339, 1384
TspDTI	ATGAA	3 cut(s)	708, 876, 1913
TspGWI	ACGGA	1 cut(s)	238
TspRI	CASTG	3 cut(s)	956, 1035, 1980
Van91I	CCANNNNNTGG	1 cut(s)	1079
XagI	CCTNNNNNAGG	1 cut(s)	479
XapI	RAATTY	5 cut(s)	863, 937, 1368, 1425, 1831
XceI	RCATGY	1 cut(s)	978
XmiI	GTMKAC	2 cut(s)	558, 1614
XmnI	GAANNNNTTC	2 cut(s)	111, 186
XspI	CTAG	6 cut(s)	638, 788, 884, 1223, 1770, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.