Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0017717

Physical Location & Seq

Genomic Coordinates Reverse (-)

7381106 .. 7383178

Gene Structure 2073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00286300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGATGTGGCTCTAATTCCTCCAATGTTGGTTTCTTCAGGCTTTTTGCCTACTGGGTCATTCTTAGAGTCATTGATTCACATATGCAATGAGATTTGCTCCATGGAAAAGCTTCCTTTTCTTCAGGTCAGGAACATCTCCACCATGATAAGGAGGATTAAGCTTCTTTCTTCTTTGTTCGAAGAGATTCAAGAAACTAACGGCCCTCTCCCTCCATCTTCAATCCTGTGCCTCACCGAGCTCTTCTCCGTGATTCGAAGAATCAAGTTTTTGATTCAAGAGTGTAAGGACTGCAGCTTTTTGTGGGGACTTATGCAGATGGAGCTGGTTTCAAATCAGTTCTACGTGTTGGTCAAGGAGTTAGGGAGAGCACTTGATATTTTGCCTGTGAGTTTGCTCAATATTACGGCAGATATTAGAGAGCAGATTGAGCTTCTTCACCGGCAAGCGAAAAGGGCAGAGTCGTTTATTGACCTTAAAGAGGTGAAGAGAAGAGAAGAGCTTTTGGTATTGATGGGGAGCAACAATGAGAGGAACAAGAAGAACAAAGGGTGGTTTGTAGACTTGGGCAAGGTGAAGGATATCTTGAGCAGCATTGGTTTGAGAAGCTCAATGGATTACGAGGAAGAGATTTCAAAGCTAGAGGCAGAAGCTCAAAAGCAAGCAGGGAGTGGCGGACTAATTGTGGTATGCAATATAAACAACCTCATCTCCCTTGTTTCATATTGCAAATCCATGATTTTCGTCTATGATGATTTCGAAACAACCAACAAGGAAGACTTCAAGCTGCTAGGTTCTACACCCTCAAATAGATATTATGATCACTCCTCATCTTCTCAATCCATAATTGCCAACATCCCAGATGAATTTCGATGCCCGATTTCACTAGACTTGATGAGAGATCCTGTGATAGTAGCATCGGGGCATACATATGATCGAAATTCCATTGCTCAGTGGATCAATTCAGGGCACCAAACATGCCCCAAAAGTGGACAGAAGCTTATTCACATGGCCCTTATACCTAACTATGCACTGAAGAGTCTATTGCATCAATGGTGTGAGGAAAACAATGTTCCAGAAGTTGGATCATCACCATCATCTTCTTCAGATTTGGAGAGGAGCAGGAGCAAAAGAGATTCGTGTGAAAATGCTGTGGATCACATTTCTGTTGTAAAAGCTGCAGTAGATGCTGTGAAGTTAACAGCTGAGTTTCTGGTGGGAAAACTAGCAACAGGTTCACCAGATATCCAAAGACAAGCAGCATACGAGCTTCGGTTACTTGCTAAAACAGGCATGGATAACAGAAGAATAATAGCTGAAGCAGGAGCTATTCCTTTCTTAGTGACATTGCTGAGATCACATGATCCAAGAATTCAAGAAAATGCTGTCACCGCGCTACTCAACCTTTCCATCTTCAACAACAACAAAATTTTGATAATGGCTGCAGGAGCAATTGATTACATAATCGATGTGTTGGAATCAGGGAACACAATGGAAGCAAGAGAGAATGCAGCAGCAGCAATTTTCAGCTTGTCCATTATTGATGACTGCAAGGTGACAATTGGAAAAAGACCAAGAGCCATTCCGGCATTGGTGGGGCTTTTGAAAGAAGGAACTCCGGCTGGTAAAAAGGACGCAGCCATTGCTCTCTTCAACCTTGCAGTCTACAATGCTAACAAGGTCAGTCTGGTGGTTGCTGGGGCGGTTCCCCTGCTCATTGATCTGTTGATGGATGACAAGGCGGGGATAACAGATGATGCCCTGGCAGTTCTTGCTCAACTTTTGGGATGCTCTGAAGGGTTGGAGGAGATTGGGAAGAGTAGGGTTCTAGTGCCAATTCTCATTGATCTTCTGAGATTTGGTTCTCCAAAAGGGAAGGAGAATTCAATAACTCTTCTGTTGGGGTTGTGCAAAGATGGAGGAGAGGAGGTTGCAAGACGACTATTGATGAACCCGCGGAGTATCCCTTCTCTTCAAACCTTGGTTGCTGATGGATCCTTGAAAGCTCGAAGAAAAGCCGATGCACTGCTTAGATTACTGAACAGATGCTGCTTTCAATCTCAGAATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002237 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009610 GO:0009617 GO:0009620 GO:0009877 GO:0009987 GO:0010033 GO:0010941 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0036377 GO:0042221 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0060548 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

690

Amino Acids

76.06

Weight (kDa)

6.38

Isoelectric Point (pI)

47.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCAfunc	PF19584	43 - 150	1.6e-06	MCAfunc domain
PUB10_N	PF25368	46 - 153	2.8e-15	PUB10-like, N-terminal domain
U-box	PF04564	286 - 357	4.1e-22	U-box domain
zf-Nse	PF11789	289 - 331	4.4e-06	Zinc-finger of the MIZ type in Nse subunit
zf-RING_UBOX	PF13445	292 - 328	5.2e-06	RING-type zinc-finger
ARM_PUB	PF25598	418 - 684	2e-23	Plant U-box protein ARM repeat region
Arm	PF00514	433 - 470	1.6e-10	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	433 - 598	5.4e-10	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0017717)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g24820
malus_domestica	MD01G1156100.v1.1 MD07G1224800.v1.1
prunus_persica	Prupe.2G253400_v2.0.a1
pyrus_communis	pycom01g17300
rosa_chinensis	RchiOBHm_Chr1g0370691
rosa_laevigata	RLG00000027017
rosa_multiflora	Rmu_sc0004550.1_g000011
rosa_roxburghii	Rroxscaffold_4G00286300
rosa_rugosa	Rorug01G0358500
rosa_samantha	Rh1DG363200
rosa_wichuraiana	Rw1G032400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	969
AccB7I	CCANNNNNTGG	1 cut(s)	1082
AccI	GTMKAC	2 cut(s)	561, 1665
AccII	CGCG	2 cut(s)	1394, 1957
AciI	CCGC	6 cut(s)	675, 1392, 1703, 1742, 1955, 1957
AclWI	GGATC	7 cut(s)	896, 965, 1093, 1164, 1358, 1989, 2002
AcsI	RAATTY	5 cut(s)	866, 940, 1371, 1428, 1882
AcuI	CTGAAG	6 cut(s)	21, 107, 1055, 1089, 1338, 1815
AfiI	CCNNNNNNNGG	4 cut(s)	150, 481, 989, 1082
AflIII	ACRYGT	1 cut(s)	345
AjnI	CCWGG	1 cut(s)	1761
AjuI	GAANNNNNNNTTGG	2 cut(s)	16, 48
Alw21I	GWGCWC	2 cut(s)	243, 373
AlwI	GGATC	7 cut(s)	896, 965, 1093, 1164, 1358, 1989, 2002
AlwNI	CAGNNNCTG	1 cut(s)	2049
AoxI	GGCC	2 cut(s)	202, 1011
ApoI	RAATTY	5 cut(s)	866, 940, 1371, 1428, 1882
Asp700I	GAANNNNTTC	2 cut(s)	111, 186
AspLEI	GCGC	1 cut(s)	1396
AspS9I	GGNCC	2 cut(s)	203, 1012
AsuHPI	GGTGA	8 cut(s)	226, 431, 496, 586, 1083, 1230, 1381, 1567
AsuII	TTCGAA	3 cut(s)	180, 256, 759
BaeGI	GKGCMC	1 cut(s)	972
BamHI	GGATCC	1 cut(s)	1994
BanI	GGYRCC	1 cut(s)	969
BanII	GRGCYC	1 cut(s)	243
BbsI	GAAGAC	1 cut(s)	783
Bbv12I	GWGCWC	2 cut(s)	243, 373
BccI	CCATC	8 cut(s)	223, 313, 508, 1102, 1418, 1723, 1910, 1985
BceAI	ACGGC	2 cut(s)	217, 423
BciT130I	CCWGG	1 cut(s)	1763
BciVI	GTATCC	1 cut(s)	1973
BclI	TGATCA	1 cut(s)	820
BfaI	CTAG	5 cut(s)	641, 791, 887, 1226, 1829
BfmI	CTRYAG	3 cut(s)	292, 1179, 1443
BfuI	GTATCC	1 cut(s)	1973
BglI	GCCNNNNNGGC	1 cut(s)	1586
Bme1390I	CCNGG	1 cut(s)	1763
BmgT120I	GGNCC	2 cut(s)	203, 1012
BmiI	GGNNCC	3 cut(s)	971, 1707, 1996
BmrFI	CCNGG	1 cut(s)	1763
BmrI	ACTGGG	1 cut(s)	63
BmsI	GCATC	8 cut(s)	863, 926, 1057, 1177, 1747, 1778, 2011, 2036
BmuI	ACTGGG	1 cut(s)	63
BpiI	GAAGAC	1 cut(s)	783
BplI	GAGNNNNNCTC	4 cut(s)	83, 115, 230, 262
Bpu14I	TTCGAA	3 cut(s)	180, 256, 759
BpuEI	CTTGAG	1 cut(s)	607
Bsa29I	ATCGAT	1 cut(s)	1467
BsaAI	YACGTR	1 cut(s)	346
BsaJI	CCNNGG	4 cut(s)	102, 1761, 1955, 1980
BsaXI	ACNNNNNCTCC	4 cut(s)	695, 725, 1914, 1944
Bsc4I	CCNNNNNNNGG	4 cut(s)	150, 481, 989, 1082
Bse118I	RCCGGY	1 cut(s)	441
Bse1I	ACTGG	1 cut(s)	58
Bse3DI	GCAATG	4 cut(s)	94, 945, 1346, 1641
BseBI	CCWGG	1 cut(s)	1763
BseCI	ATCGAT	1 cut(s)	1467
BseDI	CCNNGG	4 cut(s)	102, 1761, 1955, 1980
BseGI	GGATG	4 cut(s)	10, 855, 1738, 1793
BseLI	CCNNNNNNNGG	4 cut(s)	150, 481, 989, 1082
BseMI	GCAATG	4 cut(s)	94, 945, 1346, 1641
BseMII	CTCAG	4 cut(s)	965, 1197, 1343, 1844
BseNI	ACTGG	1 cut(s)	58
BseRI	GAGGAG	5 cut(s)	817, 1132, 1820, 1935, 1940
BseSI	GKGCMC	1 cut(s)	972
BseYI	CCCAGC	1 cut(s)	1697
Bsh1236I	CGCG	2 cut(s)	1394, 1957
BshFI	GGCC	2 cut(s)	204, 1013
BshNI	GGYRCC	1 cut(s)	969
BshVI	ATCGAT	1 cut(s)	1467
BsiHKAI	GWGCWC	2 cut(s)	243, 373
BsiSI	CCGG	3 cut(s)	442, 1586, 1619
BslFI	GGGAC	1 cut(s)	321
BslI	CCNNNNNNNGG	4 cut(s)	150, 481, 989, 1082
BsmFI	GGGAC	1 cut(s)	321
BsmI	GAATGC	1 cut(s)	1513
BsnI	GGCC	2 cut(s)	204, 1013
Bsp119I	TTCGAA	3 cut(s)	180, 256, 759
Bsp1286I	GDGCHC	3 cut(s)	243, 373, 972
Bsp19I	CCATGG	1 cut(s)	102
BspACI	CCGC	6 cut(s)	675, 1392, 1703, 1742, 1955, 1957
BspANI	GGCC	2 cut(s)	204, 1013
BspCNI	CTCAG	4 cut(s)	964, 1198, 1344, 1845
BspDI	ATCGAT	1 cut(s)	1467
BspFNI	CGCG	2 cut(s)	1394, 1957
BspLI	GGNNCC	3 cut(s)	971, 1707, 1996
BspMAI	CTGCAG	3 cut(s)	296, 1183, 1447
BspPI	GGATC	7 cut(s)	896, 965, 1093, 1164, 1358, 1989, 2002
BspQI	GCTCTTC	2 cut(s)	248, 492
BspT104I	TTCGAA	3 cut(s)	180, 256, 759
BspT107I	GGYRCC	1 cut(s)	969
BsrDI	GCAATG	4 cut(s)	94, 945, 1346, 1641
BsrFI	RCCGGY	1 cut(s)	441
BsrI	ACTGG	1 cut(s)	58
BssAI	RCCGGY	1 cut(s)	441
BssECI	CCNNGG	4 cut(s)	102, 1761, 1955, 1980
BssT1I	CCWWGG	2 cut(s)	102, 1980
Bst2UI	CCWGG	1 cut(s)	1763
BstAPI	GCANNNNNTGC	3 cut(s)	1187, 1643, 1772
BstBAI	YACGTR	1 cut(s)	346
BstBI	TTCGAA	3 cut(s)	180, 256, 759
BstC8I	GCNNGC	2 cut(s)	447, 663
BstDEI	CTNAG	8 cut(s)	64, 951, 1206, 1339, 1352, 1853, 2030, 2061
BstDSI	CCRYGG	2 cut(s)	102, 1955
BstENI	CCTNNNNNAGG	1 cut(s)	479
BstF5I	GGATG	4 cut(s)	10, 855, 1738, 1793
BstFNI	CGCG	2 cut(s)	1394, 1957
BstHHI	GCGC	1 cut(s)	1396
BstNI	CCWGG	1 cut(s)	1763
BstNSI	RCATGY	1 cut(s)	981
BstSCI	CCNGG	1 cut(s)	1761
BstSFI	CTRYAG	3 cut(s)	292, 1179, 1443
BstSLI	GKGCMC	1 cut(s)	972
BstUI	CGCG	2 cut(s)	1394, 1957
BstV2I	GAAGAC	1 cut(s)	783
BstX2I	RGATCY	2 cut(s)	901, 1994
BstYI	RGATCY	2 cut(s)	901, 1994
Bsu15I	ATCGAT	1 cut(s)	1467
BsuI	GTATCC	1 cut(s)	1973
BsuRI	GGCC	2 cut(s)	204, 1013
BsuTUI	ATCGAT	1 cut(s)	1467
BtgI	CCRYGG	2 cut(s)	102, 1955
BtsCI	GGATG	4 cut(s)	10, 855, 1738, 1793
BtsI	GCAGTG	1 cut(s)	2024
BtsIMutI	CAGTG	3 cut(s)	959, 1031, 2024
Cac8I	GCNNGC	2 cut(s)	447, 663
CaiI	CAGNNNCTG	1 cut(s)	2049
CfoI	GCGC	1 cut(s)	1396
Cfr10I	RCCGGY	1 cut(s)	441
Cfr13I	GGNCC	2 cut(s)	203, 1012
Cfr42I	CCGCGG	1 cut(s)	1958
ClaI	ATCGAT	1 cut(s)	1467
CseI	GACGC	1 cut(s)	1643
CviAII	CATG	7 cut(s)	103, 145, 736, 978, 1009, 1294, 1361
DdeI	CTNAG	8 cut(s)	64, 951, 1206, 1339, 1352, 1853, 2030, 2061
EciI	GGCGGA	1 cut(s)	690
Ecl136II	GAGCTC	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	102, 1980
Eco24I	GRGCYC	1 cut(s)	243
Eco32I	GATATC	2 cut(s)	583, 1246
Eco53kI	GAGCTC	1 cut(s)	241
Eco57I	CTGAAG	6 cut(s)	21, 107, 1055, 1089, 1338, 1815
EcoICRI	GAGCTC	1 cut(s)	241
EcoNI	CCTNNNNNAGG	1 cut(s)	479
EcoRI	GAATTC	2 cut(s)	1371, 1882
EcoRII	CCWGG	1 cut(s)	1761
EcoRV	GATATC	2 cut(s)	583, 1246
EcoT14I	CCWWGG	2 cut(s)	102, 1980
EcoT38I	GRGCYC	1 cut(s)	243
ErhI	CCWWGG	2 cut(s)	102, 1980
FaeI	CATG	7 cut(s)	106, 148, 739, 981, 1012, 1297, 1364
FalI	AAGNNNNNCTT	4 cut(s)	569, 601, 764, 796
FaqI	GGGAC	1 cut(s)	321
FatI	CATG	7 cut(s)	102, 144, 735, 977, 1008, 1293, 1360
FauI	CCCGC	2 cut(s)	1735, 1962
FauNDI	CATATG	2 cut(s)	83, 931
FbaI	TGATCA	1 cut(s)	820
FblI	GTMKAC	2 cut(s)	561, 1665
FokI	GGATG	4 cut(s)	17, 842, 1745, 1800
FriOI	GRGCYC	1 cut(s)	243
FspBI	CTAG	5 cut(s)	641, 791, 887, 1226, 1829
GlaI	GCGC	1 cut(s)	1395
GsaI	CCCAGC	1 cut(s)	1701
HaeIII	GGCC	2 cut(s)	204, 1013
HapII	CCGG	3 cut(s)	442, 1586, 1619
HgaI	GACGC	1 cut(s)	1643
HhaI	GCGC	1 cut(s)	1396
Hin1II	CATG	7 cut(s)	106, 148, 739, 981, 1012, 1297, 1364
Hin6I	GCGC	1 cut(s)	1394
HinP1I	GCGC	1 cut(s)	1394
HincII	GTYRAC	1 cut(s)	1200
HindII	GTYRAC	1 cut(s)	1200
HindIII	AAGCTT	3 cut(s)	110, 161, 998
HpaI	GTTAAC	1 cut(s)	1200
HpaII	CCGG	3 cut(s)	442, 1586, 1619
HphI	GGTGA	8 cut(s)	226, 431, 496, 586, 1083, 1230, 1381, 1567
Hpy166II	GTNNAC	5 cut(s)	562, 992, 1200, 1238, 1666
Hpy188I	TCNGA	4 cut(s)	1108, 1795, 1854, 2064
Hpy188III	TCNNGA	6 cut(s)	130, 191, 278, 586, 1076, 1376
Hpy8I	GTNNAC	5 cut(s)	562, 992, 1200, 1238, 1666
HpyAV	CCTTC	5 cut(s)	571, 1604, 1790, 1870, 1977
HpyCH4IV	ACGT	1 cut(s)	345
HpyF3I	CTNAG	8 cut(s)	64, 951, 1206, 1339, 1352, 1853, 2030, 2061
HpySE526I	ACGT	1 cut(s)	345
Hsp92II	CATG	7 cut(s)	106, 148, 739, 981, 1012, 1297, 1364
HspAI	GCGC	1 cut(s)	1394
Ksp22I	TGATCA	1 cut(s)	820
KspAI	GTTAAC	1 cut(s)	1200
KspI	CCGCGG	1 cut(s)	1958
LguI	GCTCTTC	2 cut(s)	248, 492
LmnI	GCTCC	7 cut(s)	104, 322, 519, 1119, 1125, 1325, 1448
LweI	GCATC	8 cut(s)	863, 926, 1057, 1177, 1747, 1778, 2011, 2036
MaeI	CTAG	5 cut(s)	641, 791, 887, 1226, 1829
MaeII	ACGT	1 cut(s)	345
MaeIII	GTNAC	4 cut(s)	1275, 1342, 1387, 1555
MfeI	CAATTG	2 cut(s)	1452, 1560
MflI	RGATCY	2 cut(s)	901, 1994
MhlI	GDGCHC	3 cut(s)	243, 373, 972
MlyI	GAGTC	3 cut(s)	77, 470, 1048
MmeI	TCCRAC	3 cut(s)	1063, 1455, 1782
MroXI	GAANNNNTTC	2 cut(s)	111, 186
MseI	TTAA	3 cut(s)	159, 477, 1199
MslI	CAYNNNNRTG	1 cut(s)	930
MspA1I	CMGCKG	2 cut(s)	1205, 1957
MspI	CCGG	3 cut(s)	442, 1586, 1619
MspR9I	CCNGG	1 cut(s)	1763
MunI	CAATTG	2 cut(s)	1452, 1560
Mva1269I	GAATGC	1 cut(s)	1513
MvaI	CCWGG	1 cut(s)	1763
MvnI	CGCG	2 cut(s)	1394, 1957
NcoI	CCATGG	1 cut(s)	102
NdeI	CATATG	2 cut(s)	83, 931
NlaIII	CATG	7 cut(s)	106, 148, 739, 981, 1012, 1297, 1364
NlaIV	GGNNCC	3 cut(s)	971, 1707, 1996
NmuCI	GTSAC	3 cut(s)	1342, 1387, 1555
NspI	RCATGY	1 cut(s)	981
NspV	TTCGAA	3 cut(s)	180, 256, 759
PciSI	GCTCTTC	2 cut(s)	248, 492
PctI	GAATGC	1 cut(s)	1513
PdmI	GAANNNNTTC	2 cut(s)	111, 186
PfeI	GAWTC	8 cut(s)	76, 187, 253, 261, 274, 1136, 1478, 2065
PflMI	CCANNNNNTGG	1 cut(s)	1082
PleI	GAGTC	3 cut(s)	76, 469, 1047
PpsI	GAGTC	3 cut(s)	76, 469, 1047
Ppu21I	YACGTR	1 cut(s)	346
Psp124BI	GAGCTC	1 cut(s)	243
Psp6I	CCWGG	1 cut(s)	1761
PspFI	CCCAGC	1 cut(s)	1697
PspGI	CCWGG	1 cut(s)	1761
PspN4I	GGNNCC	3 cut(s)	971, 1707, 1996
PspPI	GGNCC	2 cut(s)	203, 1012
PstI	CTGCAG	3 cut(s)	296, 1183, 1447
PstNI	CAGNNNCTG	1 cut(s)	2049
PsuI	RGATCY	2 cut(s)	901, 1994
PvuII	CAGCTG	1 cut(s)	1205
RseI	CAYNNNNRTG	1 cut(s)	930
SacI	GAGCTC	1 cut(s)	243
SacII	CCGCGG	1 cut(s)	1958
SapI	GCTCTTC	2 cut(s)	248, 492
SaqAI	TTAA	3 cut(s)	159, 477, 1199
Sau96I	GGNCC	2 cut(s)	203, 1012
SchI	GAGTC	3 cut(s)	77, 470, 1048
ScrFI	CCNGG	1 cut(s)	1763
SduI	GDGCHC	3 cut(s)	243, 373, 972
SfaNI	GCATC	8 cut(s)	863, 926, 1057, 1177, 1747, 1778, 2011, 2036
SfcI	CTRYAG	3 cut(s)	292, 1179, 1443
Sfr303I	CCGCGG	1 cut(s)	1958
SfuI	TTCGAA	3 cut(s)	180, 256, 759
SgrBI	CCGCGG	1 cut(s)	1958
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	1 cut(s)	586
SmoI	CTYRAG	1 cut(s)	586
SsiI	CCGC	6 cut(s)	675, 1392, 1703, 1742, 1955, 1957
SspI	AATATT	1 cut(s)	403
SspMI	CTAG	5 cut(s)	641, 791, 887, 1226, 1829
SstI	GAGCTC	1 cut(s)	243
StyD4I	CCNGG	1 cut(s)	1761
StyI	CCWWGG	2 cut(s)	102, 1980
TaiI	ACGT	1 cut(s)	348
TaqI	TCGA	7 cut(s)	180, 256, 759, 871, 937, 1467, 2008
TfiI	GAWTC	8 cut(s)	76, 187, 253, 261, 274, 1136, 1478, 2065
Tru1I	TTAA	3 cut(s)	159, 477, 1199
Tru9I	TTAA	3 cut(s)	159, 477, 1199
TscAI	CASTG	3 cut(s)	959, 1038, 2031
TseFI	GTSAC	3 cut(s)	1342, 1387, 1555
Tsp45I	GTSAC	3 cut(s)	1342, 1387, 1555
TspDTI	ATGAA	3 cut(s)	711, 879, 1964
TspGWI	ACGGA	1 cut(s)	238
TspRI	CASTG	3 cut(s)	959, 1038, 2031
Van91I	CCANNNNNTGG	1 cut(s)	1082
XagI	CCTNNNNNAGG	1 cut(s)	479
XapI	RAATTY	5 cut(s)	866, 940, 1371, 1428, 1882
XceI	RCATGY	1 cut(s)	981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1588
XmiI	GTMKAC	2 cut(s)	561, 1665
XmnI	GAANNNNTTC	2 cut(s)	111, 186
XspI	CTAG	5 cut(s)	641, 791, 887, 1226, 1829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.