Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008055

Physical Location & Seq

Genomic Coordinates Reverse (-)

18222154 .. 18227800

Gene Structure 5647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g19590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3120 bp

ATGCAGTCACCGCGTTTTCAGGCAATACTGCGTGTCACGAGTGGAAGAAAGAAGAGAGTACCTGAAATTAAGAGTTTCTCTCATGAGCTCAACTCCAAAGGAGTTCGACCATTTCCTGTGTGGAAGTCTCGTGCATTTGGGCATATGGAGGAGATTATGGTGGCGGTCAAGGCAAGATTTGAGAAGTTAAAGGAAGAGGTTGACTTTGATTTAGGTGCATTTGCTGGTGATTTGGTCGGAATGCTTGAAAAGTCGACACAGTCTCATCCTGAATGGAAAGAGAACTTTGAGGATTTGTTGGTTATTGCTCGGAGGTGTGCAAAGATGTCTCCTGGTGAATTTTGGGTCAAGTGTGAAGGCATTGTTCAGAATTTGGATGACCGGCGTCAAGAGATACCAATGGGGGCCCTCAAACAAGCCCACACCCGTCTTCTTTTTATTCTCACTCGGTGCACACGGCTTGTGCAGTTCCAGAAAGAGAGTGGCTATGAGGAAGAGCACATTCTCAGTCTTCATCAGCTCATCGATCTTGGAGTTTATCCAGAACAAGTTGTGGAGGCTACACAGCAGAGCTATAGTGGTTCGCTGGGTGGGAAGGAAGTGAATGAGAAGCAAGTGAGGAAGTCTCGTGAGCAGGAAAAAATTTGTGGAGTTGAGGAGGTGGAGGTTGGTACTGCCAAAAGCGTTGAATCTACTGGCAGCTATAGGATGTCATCTTGGAAAAAACTTCCCTCTGCTGCTGAGAAAAATCAGAAAGGCAATGATGTTGCTGACACACCATCAAAGGAAAAGTCAGATCGTTTGCATGCCAAAGATGACACAAAAACTTGTGGTGACTACAGTACTGAACATCTGGATACTTCATCATGCCATCTTGAACACTCAGAGGTGCCTGCAAGTGCACAAACTGTTTCTTGGGGAATATGGATGGACCAGCAGAATGTTGCATACGAAAATTTGATGATCTGTCGCATATGTGAGGTTGAAATTCCAACTGTACATGTAGAGGAACACTCTCAAATATGTACAATTGCTGATAGGTGTGACTTGAAGGGTTTAACTGTGAATGAAAGACTTGAAAGAGTTGCTGAAGCTCTTGAAAGGATAATGGAATCTTGGACACCAAAAGGCATTGAAACTCGAGGAAATTTTGATGTTGCAAGAGTGTATCCATCACAGATGCATGAGGATTCAGATGAGTTGTCACCAAAGAGAATTGACTTGTCTCGGTTCTCCGAAAGCATTCTTGATTGCATTCCTGATGTTGACAACTCTTTTGTTATGGAAGATCTGAATGTTTTGCCTGACATCTCATGTGATGCACATTCTGCTTTGATACGTGAACAAGGCACCAGAACCTCGTCAGCAGGTAGTTCGACACCAAGATCACCATTACAAACACCAAGAACCAGTCATCTTGAAATGCTGCTGAGTGGAGGGAGAGCAATACCGGAACTTGAGAGTTCTCAGCAGATACACAAGCTACTGGACATCGCTCGTTCTGTCGCAAATGTTAGCAATTGTGACTACACTGCATTGGAGTATATGCTTGAACGACTGGAAGACCTAAAATATGCTATCCAGGACAGGAAGGTGGATGCACTCGTTGTAGAGACTTTTGGAAGGCGTATTGAAAAATTATTGCAGGAAAAATATGTACACCTTTGTGGGCAGATAGAAGATGAAAAATTGGATTCATCAAATGGTATGGCTGATGAAGAAAGTTCAGTGGAAGATGAAGCAGTTCGTAGTCTGCGTGTCAGCCCCATCAATCCATGTTCTAAGGATCGAACTTCTATTGAAGATTTTGAGATAATAAAACCAATAAGCAGGGGTGCATTTGGACGAGTTTTTCTTGCCAGAAAAAGAGCGACTGGTGACTTATTTGCTATAAAGGTATTAAAGAAGGCTGATATGATCCGTAAAAATGCCGTTGAGAGTATTTTGGCAGAGCGTAACATCCTTATATTGGTTCGCAATCCCTTTGTGGGAAAATCTTTATCTGGTCATGGAGTACTTAAATGGTGGATCGATCTTTACTCTTTATTGAGAAATCTAGGCTGCTTGGACGAAGATATGGCCCGCGTATATATTGCAGAAGTTGTTCTTGCTTTGGAGTATTTGCATTCATTAAATGTTATCCATAGAGACTTGAAACCAGACAACCTGTTGATTGGTCAAGATGGTCATATCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTAATCAGCAGCACTGATGACTTATCAGGTCCATCAGTTAGTGGTACTGGTTTTGTTCCAGATGATGAACCAAAATCTGAGTCTTCATCAGAAAGGGCGCAGCGCCAAAAACATTCAATCGTTGGGACCCCTGATTATTTGGCACCTGAAATACTTCTTGGCATGGGGCATAGTGCAACTGCTGATTGGTGGTCTGTGGGGGTTATTCTTTTTGAGGTGCTTGTCGGTATTCCACCATTCAATGCAGAACATCCACAGCAAATTTTCAACAATATAATAAACAGAGATATCCCCTGGCCAAAGGTACCCGAGGAGATGAGCCCTGAAGCGTACGATTTGATTGACAAACTGCTGACCGACAACCCAGTTCAAAGACTTGGAGCAACAGGTACTAGGGAGGTGAAGCAACATCCTTTTTTCAAGGATATTAGCTGGGATACTCTTGCGAGGCAGAAGGCTATGTTCATACCATCAACCGATGCACACGATACAAGTTATTTCATGAGCCGATACATATGGAATCCAGAAGATGATCATGTTAATGGTGCCAGTGACTTTGATGACATGACTGAAACATGCAGCAGCGGTTCATGTAGCAACATACAAGACGAAGACGGGGATGAATGTGGTAGTTTGGCGGACTTCAGTGCGCCAAACCTTGACGTGCAGTACTCTTTTAGTAATTTTTCATTCAAGGTGACAAGACCGTTTTTCTTTAACCCTTCAACAAATCACTATGCACTGCCCTACTGCTCCAAGCTTACTGTCCCTTCAAATGTGGGTTTTCGGATAGAAGTCTTCAACGTGAATAGTCCAGGAAGCGCGGCATCCACTCAGCGAATAGCGGTTGTTCTTCCTGAATGCAGAGGTAGGCTGCTATTGAATCAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

1040

Amino Acids

116.7

Weight (kDa)

5.27

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IREH1	PF26031	41 - 159	2e-55	IREH1-like domain
Pkinase	PF00069	603 - 882	1e-49	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	604 - 741	6e-12	Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr	PF07714	775 - 868	2.3e-06	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62310
fragaria_vesca	FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920
malus_domestica	MD00G1104600.v1.1 MD07G1256300.v1.1
prunus_persica	Prupe.2G255800_v2.0.a1 Prupe.2G280200_v2.0.a1 Prupe.2G280200_v2.0.a1
pyrus_communis	pycom01g19590 pycom07g22920
rosa_chinensis	RchiOBHm_Chr1g0374881
rosa_laevigata	RLG00000026710
rosa_multiflora	Rmu_sc0003145.1_g000005 Rmu_sc0004947.1_g000030
rosa_roxburghii	Rroxscaffold_4G00283210
rosa_rugosa	Rorug01G0385500
rosa_samantha	Rh1AG397100 Rh1BG360900 Rh1CG374600 Rh1DG391900
rosa_wichuraiana	Rw1G035210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1358
Acc65I	GGTACC	1 cut(s)	2530
AccB1I	GGYRCC	5 cut(s)	889, 1349, 2368, 2530, 2771
AccI	GTMKAC	1 cut(s)	254
AccII	CGCG	3 cut(s)	13, 2085, 3050
AciI	CCGC	7 cut(s)	11, 164, 2083, 2811, 2864, 3050, 3071
AclWI	GGATC	3 cut(s)	1794, 1912, 2036
AcoI	YGGCCR	1 cut(s)	2522
AcsI	RAATTY	7 cut(s)	338, 370, 642, 955, 987, 1147, 2487
AcuI	CTGAAG	3 cut(s)	1110, 2571, 2854
AcyI	GRCGYC	1 cut(s)	385
AdeI	CACNNNGTG	1 cut(s)	450
AfiI	CCNNNNNNNGG	2 cut(s)	1969, 1988
AflIII	ACRYGT	1 cut(s)	1000
AjiI	CACGTC	1 cut(s)	2890
AjnI	CCWGG	4 cut(s)	331, 1581, 2519, 3040
AjuI	GAANNNNNNNTTGG	2 cut(s)	2367, 2399
AleI	CACNNNNGTG	1 cut(s)	1665
AluBI	AGCT	8 cut(s)	88, 520, 573, 702, 1094, 1483, 2658, 2986
AluI	AGCT	8 cut(s)	88, 520, 573, 702, 1094, 1483, 2658, 2986
Alw21I	GWGCWC	4 cut(s)	90, 455, 501, 904
Alw26I	GTCTC	7 cut(s)	132, 267, 333, 630, 1230, 1607, 2142
Alw44I	GTGCAC	2 cut(s)	451, 900
AlwI	GGATC	3 cut(s)	1794, 1912, 2036
Ama87I	CYCGRG	2 cut(s)	1140, 2534
AoxI	GGCC	3 cut(s)	405, 2079, 2522
ApaI	GGGCCC	1 cut(s)	409
ApaLI	GTGCAC	2 cut(s)	451, 900
ApeKI	GCWGC	9 cut(s)	699, 737, 1426, 2061, 2235, 2326, 2805, 2808, 3100
ApoI	RAATTY	7 cut(s)	338, 370, 642, 955, 987, 1147, 2487
ArsI	GACNNNNNNTTYG	6 cut(s)	776, 808, 1259, 1291, 2291, 2323
Asp700I	GAANNNNTTC	4 cut(s)	1242, 1743, 2103, 2379
Asp718I	GGTACC	1 cut(s)	2530
AspLEI	GCGC	4 cut(s)	2326, 2331, 2878, 3050
AspS9I	GGNCC	6 cut(s)	405, 406, 931, 2080, 2255, 2352
AsuHPI	GGTGA	8 cut(s)	239, 347, 845, 1197, 1380, 1889, 2638, 2935
AvaI	CYCGRG	2 cut(s)	1140, 2534
AvaII	GGWCC	3 cut(s)	931, 2255, 2352
BaeGI	GKGCMC	3 cut(s)	409, 455, 904
BalI	TGGCCA	1 cut(s)	2524
BanI	GGYRCC	5 cut(s)	889, 1349, 2368, 2530, 2771
BanII	GRGCYC	4 cut(s)	90, 409, 2214, 2549
BauI	CACGAG	3 cut(s)	37, 129, 627
BbsI	GAAGAC	6 cut(s)	422, 503, 1569, 2301, 2844, 3016
Bbv12I	GWGCWC	4 cut(s)	90, 455, 501, 904
BbvI	GCAGC	9 cut(s)	711, 724, 1413, 2048, 2247, 2338, 2817, 2820, 3087
BccI	CCATC	8 cut(s)	787, 879, 922, 1180, 1775, 2177, 2266, 2704
BceAI	ACGGC	2 cut(s)	473, 1916
BcgI	CGANNNNNNTGC	2 cut(s)	1356, 1390
BciT130I	CCWGG	4 cut(s)	333, 1583, 2521, 3042
BciVI	GTATCC	3 cut(s)	850, 1179, 2656
BclI	TGATCA	1 cut(s)	2758
BcoDI	GTCTC	7 cut(s)	132, 267, 333, 630, 1230, 1607, 2142
BfaI	CTAG	2 cut(s)	2057, 2619
BfmI	CTRYAG	3 cut(s)	574, 703, 838
BfoI	RGCGCY	1 cut(s)	2332
BfuAI	ACCTGC	1 cut(s)	1358
BfuI	GTATCC	3 cut(s)	850, 1179, 2656
BglII	AGATCT	1 cut(s)	1288
BmcAI	AGTACT	3 cut(s)	844, 2016, 2897
Bme1390I	CCNGG	4 cut(s)	333, 1583, 2521, 3042
Bme18I	GGWCC	3 cut(s)	931, 2255, 2352
BmeT110I	CYCGRG	2 cut(s)	1140, 2534
BmgBI	CACGTC	1 cut(s)	2890
BmgT120I	GGNCC	6 cut(s)	405, 406, 931, 2080, 2255, 2352
BmiI	GGNNCC	9 cut(s)	406, 407, 891, 1351, 2353, 2354, 2370, 2532, 2773
BmrFI	CCNGG	4 cut(s)	333, 1583, 2521, 3042
BmrI	ACTGGG	1 cut(s)	2585
BmsI	GCATC	5 cut(s)	1170, 1309, 1588, 2695, 3062
BmuI	ACTGGG	1 cut(s)	2585
BoxI	GACNNNNGTC	1 cut(s)	384
BpiI	GAAGAC	6 cut(s)	422, 503, 1569, 2301, 2844, 3016
BplI	GAGNNNNNCTC	8 cut(s)	64, 96, 77, 109, 610, 642, 998, 1030
BpuEI	CTTGAG	1 cut(s)	1478
Bsa29I	ATCGAT	2 cut(s)	525, 2031
BsaAI	YACGTR	1 cut(s)	1340
BsaHI	GRCGYC	1 cut(s)	385
BsaJI	CCNNGG	3 cut(s)	2217, 2519, 2535
BsaWI	WCCGGW	1 cut(s)	1450
Bsc4I	CCNNNNNNNGG	2 cut(s)	1969, 1988
Bse118I	RCCGGY	1 cut(s)	381
Bse1I	ACTGG	8 cut(s)	700, 1410, 1491, 1563, 1879, 2278, 2591, 2775
Bse3DI	GCAATG	1 cut(s)	766
BseBI	CCWGG	4 cut(s)	333, 1583, 2521, 3042
BseCI	ATCGAT	2 cut(s)	525, 2031
BseDI	CCNNGG	3 cut(s)	2217, 2519, 2535
BseLI	CCNNNNNNNGG	2 cut(s)	1969, 1988
BseMI	GCAATG	1 cut(s)	766
BseMII	CTCAG	7 cut(s)	520, 732, 897, 1421, 1481, 2295, 3074
BseNI	ACTGG	8 cut(s)	700, 1410, 1491, 1563, 1879, 2278, 2591, 2775
BseRI	GAGGAG	3 cut(s)	164, 671, 2552
BseSI	GKGCMC	3 cut(s)	409, 455, 904
BseXI	GCAGC	9 cut(s)	711, 724, 1413, 2048, 2247, 2338, 2817, 2820, 3087
BseYI	CCCAGC	2 cut(s)	586, 2658
BsgI	GTGCAG	2 cut(s)	485, 2912
Bsh1236I	CGCG	3 cut(s)	13, 2085, 3050
BshFI	GGCC	3 cut(s)	407, 2081, 2524
BshNI	GGYRCC	5 cut(s)	889, 1349, 2368, 2530, 2771
BshVI	ATCGAT	2 cut(s)	525, 2031
BsiHKAI	GWGCWC	4 cut(s)	90, 455, 501, 904
BsiHKCI	CYCGRG	2 cut(s)	1140, 2534
BsiSI	CCGG	2 cut(s)	382, 1451
BsiWI	CGTACG	1 cut(s)	2556
BslFI	GGGAC	2 cut(s)	2365, 2978
BslI	CCNNNNNNNGG	2 cut(s)	1969, 1988
BsmAI	GTCTC	7 cut(s)	132, 267, 333, 630, 1230, 1607, 2142
BsmFI	GGGAC	2 cut(s)	2365, 2978
BsmI	GAATGC	5 cut(s)	246, 1242, 1254, 2125, 3092
BsnI	GGCC	3 cut(s)	407, 2081, 2524
BsoBI	CYCGRG	2 cut(s)	1140, 2534
Bsp120I	GGGCCC	1 cut(s)	405
Bsp1286I	GDGCHC	7 cut(s)	90, 409, 455, 501, 904, 2214, 2549
Bsp1407I	TGTACA	3 cut(s)	997, 1025, 1657
BspACI	CCGC	7 cut(s)	11, 164, 2083, 2811, 2864, 3050, 3071
BspANI	GGCC	3 cut(s)	407, 2081, 2524
BspCNI	CTCAG	7 cut(s)	519, 733, 896, 1422, 1480, 2296, 3073
BspDI	ATCGAT	2 cut(s)	525, 2031
BspFNI	CGCG	3 cut(s)	13, 2085, 3050
BspHI	TCATGA	2 cut(s)	82, 2727
BspLI	GGNNCC	9 cut(s)	406, 407, 891, 1351, 2353, 2354, 2370, 2532, 2773
BspMI	ACCTGC	1 cut(s)	1358
BspPI	GGATC	3 cut(s)	1794, 1912, 2036
BspQI	GCTCTTC	1 cut(s)	489
BspT107I	GGYRCC	5 cut(s)	889, 1349, 2368, 2530, 2771
BsrDI	GCAATG	1 cut(s)	766
BsrFI	RCCGGY	1 cut(s)	381
BsrGI	TGTACA	3 cut(s)	997, 1025, 1657
BsrI	ACTGG	8 cut(s)	700, 1410, 1491, 1563, 1879, 2278, 2591, 2775
BssAI	RCCGGY	1 cut(s)	381
BssECI	CCNNGG	3 cut(s)	2217, 2519, 2535
BssNI	GRCGYC	1 cut(s)	385
BssSI	CACGAG	3 cut(s)	37, 129, 627
BssT1I	CCWWGG	1 cut(s)	2217
Bst2BI	CACGAG	3 cut(s)	37, 129, 627
Bst2UI	CCWGG	4 cut(s)	333, 1583, 2521, 3042
Bst4CI	ACNGT	7 cut(s)	261, 842, 910, 997, 1063, 2934, 2992
Bst6I	CTCTTC	3 cut(s)	47, 189, 489
BstACI	GRCGYC	1 cut(s)	385
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstAUI	TGTACA	3 cut(s)	997, 1025, 1657
BstBAI	YACGTR	1 cut(s)	1340
BstC8I	GCNNGC	3 cut(s)	807, 894, 2083
BstDEI	CTNAG	9 cut(s)	506, 741, 883, 1430, 1467, 1782, 2304, 3060, 3117
BstFNI	CGCG	3 cut(s)	13, 2085, 3050
BstH2I	RGCGCY	1 cut(s)	2332
BstHHI	GCGC	4 cut(s)	2326, 2331, 2878, 3050
BstMAI	GTCTC	7 cut(s)	132, 267, 333, 630, 1230, 1607, 2142
BstMWI	GCNNNNNNNGC	3 cut(s)	10, 170, 1328
BstNI	CCWGG	4 cut(s)	333, 1583, 2521, 3042
BstNSI	RCATGY	3 cut(s)	809, 1004, 2805
BstPAI	GACNNNNGTC	1 cut(s)	384
BstSCI	CCNGG	4 cut(s)	331, 1581, 2519, 3040
BstSFI	CTRYAG	3 cut(s)	574, 703, 838
BstSLI	GKGCMC	3 cut(s)	409, 455, 904
BstUI	CGCG	3 cut(s)	13, 2085, 3050
BstV1I	GCAGC	9 cut(s)	711, 724, 1413, 2048, 2247, 2338, 2817, 2820, 3087
BstV2I	GAAGAC	6 cut(s)	422, 503, 1569, 2301, 2844, 3016
BstX2I	RGATCY	1 cut(s)	1288
BstYI	RGATCY	1 cut(s)	1288
Bsu15I	ATCGAT	2 cut(s)	525, 2031
BsuI	GTATCC	3 cut(s)	850, 1179, 2656
BsuRI	GGCC	3 cut(s)	407, 2081, 2524
BsuTUI	ATCGAT	2 cut(s)	525, 2031
BtgZI	GCGATG	1 cut(s)	1477
BtrI	CACGTC	1 cut(s)	2890
BtsI	GCAGTG	2 cut(s)	1530, 2966
BtsIMutI	CAGTG	6 cut(s)	1530, 1734, 2238, 2782, 2878, 2966
BveI	ACCTGC	1 cut(s)	1358
Cac8I	GCNNGC	3 cut(s)	807, 894, 2083
CciI	TCATGA	2 cut(s)	82, 2727
CfoI	GCGC	4 cut(s)	2326, 2331, 2878, 3050
Cfr10I	RCCGGY	1 cut(s)	381
Cfr13I	GGNCC	6 cut(s)	405, 406, 931, 2080, 2255, 2352
ClaI	ATCGAT	2 cut(s)	525, 2031
CseI	GACGC	1 cut(s)	374
DdeI	CTNAG	9 cut(s)	506, 741, 883, 1430, 1467, 1782, 2304, 3060, 3117
DraIII	CACNNNGTG	1 cut(s)	450
EaeI	YGGCCR	1 cut(s)	2522
Eam1104I	CTCTTC	3 cut(s)	47, 189, 489
EarI	CTCTTC	3 cut(s)	47, 189, 489
EciI	GGCGGA	1 cut(s)	2879
Ecl136II	GAGCTC	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	2217
Eco24I	GRGCYC	4 cut(s)	90, 409, 2214, 2549
Eco32I	GATATC	1 cut(s)	2515
Eco47I	GGWCC	3 cut(s)	931, 2255, 2352
Eco53kI	GAGCTC	1 cut(s)	88
Eco57I	CTGAAG	3 cut(s)	1110, 2571, 2854
Eco88I	CYCGRG	2 cut(s)	1140, 2534
EcoICRI	GAGCTC	1 cut(s)	88
EcoO109I	RGGNCCY	3 cut(s)	405, 406, 2352
EcoRII	CCWGG	4 cut(s)	331, 1581, 2519, 3040
EcoRV	GATATC	1 cut(s)	2515
EcoT14I	CCWWGG	1 cut(s)	2217
EcoT22I	ATGCAT	1 cut(s)	1185
EcoT38I	GRGCYC	4 cut(s)	90, 409, 2214, 2549
ErhI	CCWWGG	1 cut(s)	2217
FalI	AAGNNNNNCTT	2 cut(s)	2091, 2123
FaqI	GGGAC	2 cut(s)	2365, 2978
FauI	CCCGC	1 cut(s)	2090
FauNDI	CATATG	3 cut(s)	144, 974, 2741
FbaI	TGATCA	1 cut(s)	2758
FblI	GTMKAC	1 cut(s)	254
FriOI	GRGCYC	4 cut(s)	90, 409, 2214, 2549
FspBI	CTAG	2 cut(s)	2057, 2619
GlaI	GCGC	4 cut(s)	2325, 2330, 2877, 3049
GsaI	CCCAGC	2 cut(s)	590, 2662
HaeII	RGCGCY	1 cut(s)	2332
HaeIII	GGCC	3 cut(s)	407, 2081, 2524
HapII	CCGG	2 cut(s)	382, 1451
HgaI	GACGC	1 cut(s)	374
HhaI	GCGC	4 cut(s)	2326, 2331, 2878, 3050
Hin1I	GRCGYC	1 cut(s)	385
Hin6I	GCGC	4 cut(s)	2324, 2329, 2876, 3048
HinP1I	GCGC	4 cut(s)	2324, 2329, 2876, 3048
HincII	GTYRAC	4 cut(s)	202, 255, 1267, 2199
HindII	GTYRAC	4 cut(s)	202, 255, 1267, 2199
HindIII	AAGCTT	1 cut(s)	2984
HinfI	GANTC	7 cut(s)	689, 1112, 1190, 1694, 2306, 2746, 3109
HpaII	CCGG	2 cut(s)	382, 1451
HphI	GGTGA	8 cut(s)	239, 347, 845, 1197, 1380, 1889, 2638, 2935
Hpy166II	GTNNAC	8 cut(s)	202, 255, 453, 902, 1267, 1343, 1660, 2199
Hpy8I	GTNNAC	8 cut(s)	202, 255, 453, 902, 1267, 1343, 1660, 2199
HpyAV	CCTTC	9 cut(s)	350, 589, 1045, 1585, 1617, 1900, 2674, 2958, 3006
HpyCH4III	ACNGT	7 cut(s)	261, 842, 910, 997, 1063, 2934, 2992
HpyCH4IV	ACGT	3 cut(s)	1339, 2889, 3030
HpyF10VI	GCNNNNNNNGC	3 cut(s)	10, 170, 1328
HpyF3I	CTNAG	9 cut(s)	506, 741, 883, 1430, 1467, 1782, 2304, 3060, 3117
HpySE526I	ACGT	3 cut(s)	1339, 2889, 3030
Hsp92I	GRCGYC	1 cut(s)	385
HspAI	GCGC	4 cut(s)	2324, 2329, 2876, 3048
KflI	GGGWCCC	1 cut(s)	2352
KpnI	GGTACC	1 cut(s)	2534
Ksp22I	TGATCA	1 cut(s)	2758
LguI	GCTCTTC	1 cut(s)	489
LmnI	GCTCC	2 cut(s)	2606, 2984
Lsp1109I	GCAGC	9 cut(s)	711, 724, 1413, 2048, 2247, 2338, 2817, 2820, 3087
LweI	GCATC	5 cut(s)	1170, 1309, 1588, 2695, 3062
MaeI	CTAG	2 cut(s)	2057, 2619
MaeII	ACGT	3 cut(s)	1339, 2889, 3030
MfeI	CAATTG	2 cut(s)	1029, 1519
MflI	RGATCY	1 cut(s)	1288
MhlI	GDGCHC	7 cut(s)	90, 409, 455, 501, 904, 2214, 2549
MlsI	TGGCCA	1 cut(s)	2524
MluNI	TGGCCA	1 cut(s)	2524
MlyI	GAGTC	1 cut(s)	2315
MmeI	TCCRAC	2 cut(s)	217, 1016
Mox20I	TGGCCA	1 cut(s)	2524
Mph1103I	ATGCAT	1 cut(s)	1185
MroXI	GAANNNNTTC	4 cut(s)	1242, 1743, 2103, 2379
MscI	TGGCCA	1 cut(s)	2524
MseI	TTAA	8 cut(s)	69, 188, 1058, 1901, 2019, 2132, 2766, 2943
MslI	CAYNNNNRTG	2 cut(s)	1665, 2766
Msp20I	TGGCCA	1 cut(s)	2524
MspA1I	CMGCKG	1 cut(s)	2811
MspI	CCGG	2 cut(s)	382, 1451
MspR9I	CCNGG	4 cut(s)	333, 1583, 2521, 3042
MteI	GCGCNGCGC	1 cut(s)	2327
MunI	CAATTG	2 cut(s)	1029, 1519
Mva1269I	GAATGC	5 cut(s)	246, 1242, 1254, 2125, 3092
MvaI	CCWGG	4 cut(s)	333, 1583, 2521, 3042
MvnI	CGCG	3 cut(s)	13, 2085, 3050
MwoI	GCNNNNNNNGC	3 cut(s)	10, 170, 1328
NdeI	CATATG	3 cut(s)	144, 974, 2741
NlaIV	GGNNCC	9 cut(s)	406, 407, 891, 1351, 2353, 2354, 2370, 2532, 2773
NmuCI	GTSAC	9 cut(s)	6, 34, 833, 1043, 1203, 1523, 1877, 2777, 2923
NsiI	ATGCAT	1 cut(s)	1185
NspI	RCATGY	3 cut(s)	809, 1004, 2805
OliI	CACNNNNGTG	1 cut(s)	1665
PaeI	GCATGC	1 cut(s)	809
PaeR7I	CTCGAG	1 cut(s)	1140
PagI	TCATGA	2 cut(s)	82, 2727
PciI	ACATGT	1 cut(s)	1000
PciSI	GCTCTTC	1 cut(s)	489
PcsI	WCGNNNNNNNCGW	1 cut(s)	1753
PctI	GAATGC	5 cut(s)	246, 1242, 1254, 2125, 3092
PdmI	GAANNNNTTC	4 cut(s)	1242, 1743, 2103, 2379
PfeI	GAWTC	6 cut(s)	689, 1112, 1190, 1694, 2746, 3109
Pfl23II	CGTACG	1 cut(s)	2556
PflFI	GACNNNGTC	1 cut(s)	259
PfoI	TCCNGGA	2 cut(s)	1581, 3040
PleI	GAGTC	1 cut(s)	2314
PpsI	GAGTC	1 cut(s)	2314
Ppu21I	YACGTR	1 cut(s)	1340
PpuMI	RGGWCCY	1 cut(s)	2352
PscI	ACATGT	1 cut(s)	1000
PshAI	GACNNNNGTC	1 cut(s)	384
Psp124BI	GAGCTC	1 cut(s)	90
Psp5II	RGGWCCY	1 cut(s)	2352
Psp6I	CCWGG	4 cut(s)	331, 1581, 2519, 3040
PspFI	CCCAGC	2 cut(s)	586, 2658
PspGI	CCWGG	4 cut(s)	331, 1581, 2519, 3040
PspLI	CGTACG	1 cut(s)	2556
PspN4I	GGNNCC	9 cut(s)	406, 407, 891, 1351, 2353, 2354, 2370, 2532, 2773
PspOMI	GGGCCC	1 cut(s)	405
PspPI	GGNCC	6 cut(s)	405, 406, 931, 2080, 2255, 2352
PspPPI	RGGWCCY	1 cut(s)	2352
PspXI	VCTCGAGB	1 cut(s)	1140
PsuI	RGATCY	1 cut(s)	1288
PsyI	GACNNNGTC	1 cut(s)	259
RseI	CAYNNNNRTG	2 cut(s)	1665, 2766
SacI	GAGCTC	1 cut(s)	90
SalI	GTCGAC	1 cut(s)	253
SapI	GCTCTTC	1 cut(s)	489
SaqAI	TTAA	8 cut(s)	69, 188, 1058, 1901, 2019, 2132, 2766, 2943
Sau96I	GGNCC	6 cut(s)	405, 406, 931, 2080, 2255, 2352
ScaI	AGTACT	3 cut(s)	844, 2016, 2897
SchI	GAGTC	1 cut(s)	2315
ScrFI	CCNGG	4 cut(s)	333, 1583, 2521, 3042
SduI	GDGCHC	7 cut(s)	90, 409, 455, 501, 904, 2214, 2549
SfaNI	GCATC	5 cut(s)	1170, 1309, 1588, 2695, 3062
SfcI	CTRYAG	3 cut(s)	574, 703, 838
Sfr274I	CTCGAG	1 cut(s)	1140
SinI	GGWCC	3 cut(s)	931, 2255, 2352
SlaI	CTCGAG	1 cut(s)	1140
SmiMI	CAYNNNNRTG	2 cut(s)	1665, 2766
SmlI	CTYRAG	2 cut(s)	1140, 1457
SmoI	CTYRAG	2 cut(s)	1140, 1457
SphI	GCATGC	1 cut(s)	809
SsiI	CCGC	7 cut(s)	11, 164, 2083, 2811, 2864, 3050, 3071
SspMI	CTAG	2 cut(s)	2057, 2619
SstI	GAGCTC	1 cut(s)	90
StyD4I	CCNGG	4 cut(s)	331, 1581, 2519, 3040
StyI	CCWWGG	1 cut(s)	2217
TaaI	ACNGT	7 cut(s)	261, 842, 910, 997, 1063, 2934, 2992
TaiI	ACGT	3 cut(s)	1342, 2892, 3033
TaqI	TCGA	7 cut(s)	106, 254, 525, 1141, 1376, 1789, 2031
TaqII	GACCGA	1 cut(s)	2597
TatI	WGTACW	6 cut(s)	842, 997, 1025, 1657, 2014, 2895
TauI	GCSGC	1 cut(s)	3053
TfiI	GAWTC	6 cut(s)	689, 1112, 1190, 1694, 2746, 3109
Tru1I	TTAA	8 cut(s)	69, 188, 1058, 1901, 2019, 2132, 2766, 2943
Tru9I	TTAA	8 cut(s)	69, 188, 1058, 1901, 2019, 2132, 2766, 2943
TscAI	CASTG	6 cut(s)	1537, 1734, 2245, 2782, 2878, 2973
TseFI	GTSAC	9 cut(s)	6, 34, 833, 1043, 1203, 1523, 1877, 2777, 2923
TseI	GCWGC	9 cut(s)	699, 737, 1426, 2061, 2235, 2326, 2805, 2808, 3100
Tsp45I	GTSAC	9 cut(s)	6, 34, 833, 1043, 1203, 1523, 1877, 2777, 2923
TspGWI	ACGGA	1 cut(s)	1910
TspRI	CASTG	6 cut(s)	1537, 1734, 2245, 2782, 2878, 2973
Tth111I	GACNNNGTC	1 cut(s)	259
VneI	GTGCAC	2 cut(s)	451, 900
VpaK11BI	GGWCC	3 cut(s)	931, 2255, 2352
XapI	RAATTY	7 cut(s)	338, 370, 642, 955, 987, 1147, 2487
XceI	RCATGY	3 cut(s)	809, 1004, 2805
XcmI	CCANNNNNNNNNTGG	2 cut(s)	117, 479
XhoI	CTCGAG	1 cut(s)	1140
XmiI	GTMKAC	1 cut(s)	254
XmnI	GAANNNNTTC	4 cut(s)	1242, 1743, 2103, 2379
XspI	CTAG	2 cut(s)	2057, 2619
ZrmI	AGTACT	3 cut(s)	844, 2016, 2897
Zsp2I	ATGCAT	1 cut(s)	1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.