Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008055

Physical Location & Seq

Genomic Coordinates Forward (+)

49707585 .. 49710345

Gene Structure 2761 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0385500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAAGTTCTCAATCCGGATTCAAGCGATTTTGTTGGTTGCTTTCCTCTATCCGGCACTAATGGTTGAGTCCTTGGTTCGACACTATAACTTCAGGGTGGTGTTGAAGAACACAACAAAGCTCTGTTCAAGTAAGGTCATACCCACAGTGAATGGGAAGTTCCCGGGACCAACTCTATATGCAAGGGAAGGTGACACCGTAATTGTTAGGGTCACCAACCATGGCAATCACAATTTGACAATCCACTGGCATGGGGTGAAGCAACTTGGAACAGGTTGGGCAGATGGACCAGCATATATCACACAATGCCCAATACAGCCTGGACAAAATTTCATCTACAAGTTCACACTTACAGGACAAAGAGGCACACTTCTTTGGCATGCACATCACTTATGGCTAAGAGCCACACTACATGGTGCCATTGTCATCTTGCCAAAGCTAGGCACTCCCTACCCTTTTCCCACACCTCAAGAGGAAAGAATCATCATATTATCCGAGTGGTGGAAATCAGATGTTGAAGCTGTGATTGATGAGGCTACACAATCTGGCTTCCCACCAAATGTTTCTGATGCTCACACTATCAATGGCCATCCAGGACCCGTTCCTGGTTGCTCTTCTCAGGGCTTCACTTTACATGTTGAAAGTGGCAAGACTTATTTGCTACGCATCATAAACGCAGCGCTGAATGATGACTTGTTCTTCAAGATTGCTGGGCACAACCTAACAGTTGTTGAAGTCGATGCTTCCTACACGAAACCATTCCAAACCGACACTATATATATCAGTCCAGGCCAAACCACAACAGCACTTTTAGAAGCAAACAAAGATATTGGCAAGTACTTAATATCAGTCTCTCCTTTCATCGATATCCCAATTGGCATTGACAACTTGACCTCAATAGCTACATTGCGCTACAAGTACACCCCTCCAAATCCCACAACCTTCTTGACCAGCATCCCTCCTCAAAACGCAACCCCATTGACAAAAAAATTTATCGACTCCCTTCGAAGCCTCAATTCGAAACAATACCCAGCTAATGTACCATTAACCATAGACCATTCTCTCTTTTTCACCGTTGGAGTTGGTATTAATCCATGTGACACATGTGTTAACGGGAGCAAGCTAGTGGCTTCTGTTAATAATGTTAGCTTTGTGATGCCAACTATAGCTCTTCTTCAAGCTTATTACTACAGGATAAAGGGAGTCTACACACTTGATTTTCCAGCAAACCCACCAAACTCTTTTAATTACACTGGTACTCCTCCACTTAACGTCCAGACCACAAATGGTACAAGGCTGTATAGGTTGGGGTACAATTCGACGGTTCAGATTGTGTTACAAGACACTGCTATCATACTACCAGAGAGTCATCCTACCCATCTTCATGGGTCTAATTTCTTTGTGGTTGGGACAGGATTAGGTAATTTTGATCCAGACAAGGACCCGAAAACGTTTAATCTCATCGATCCGGTGGAGAGGAACACAGTGCCAGTGCCAACTGGTGGATGGACTGCAATCAGATTCAGGGCAGATAACCCAGGAATTTGGTTTATGCATTGTCATATAGAATTGCACACAACATGGGGGCTCAAGATGGCATTTTTGGTGGACAATGGGGAAGGCCCAAATGAGTGTCTGCAACCACCTCCTTCTGATCTTCCAACTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

556

Amino Acids

61.45

Weight (kDa)

7.68

Isoelectric Point (pI)

31.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	36 - 146	5.4e-39	Multicopper oxidase
Cu-oxidase	PF00394	159 - 306	2.8e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	406 - 539	1.7e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62310
fragaria_vesca	FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920
malus_domestica	MD00G1104600.v1.1 MD07G1256300.v1.1
prunus_persica	Prupe.2G255800_v2.0.a1 Prupe.2G280200_v2.0.a1 Prupe.2G280200_v2.0.a1
pyrus_communis	pycom01g19590 pycom07g22920
rosa_chinensis	RchiOBHm_Chr1g0374881
rosa_laevigata	RLG00000026710
rosa_multiflora	Rmu_sc0003145.1_g000005 Rmu_sc0004947.1_g000030
rosa_roxburghii	Rroxscaffold_4G00283210
rosa_rugosa	Rorug01G0385500
rosa_samantha	Rh1AG397100 Rh1BG360900 Rh1CG374600 Rh1DG391900
rosa_wichuraiana	Rw1G035210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	416
AccB7I	CCANNNNNTGG	1 cut(s)	1502
AccI	GTMKAC	1 cut(s)	1206
AccIII	TCCGGA	1 cut(s)	15
AclI	AACGTT	1 cut(s)	1451
AclWI	GGATC	2 cut(s)	1424, 1460
AcoI	YGGCCR	1 cut(s)	586
AcsI	RAATTY	3 cut(s)	328, 989, 1542
AcuI	CTGAAG	1 cut(s)	76
AfaI	GTAC	6 cut(s)	839, 920, 1041, 1258, 1291, 1313
AfeI	AGCGCT	1 cut(s)	681
AfiI	CCNNNNNNNGG	5 cut(s)	52, 440, 501, 605, 1502
AflIII	ACRYGT	2 cut(s)	634, 1103
AgsI	TTSAA	8 cut(s)	23, 106, 129, 518, 641, 703, 734, 1178
AjnI	CCWGG	5 cut(s)	319, 592, 604, 787, 1537
AluBI	AGCT	9 cut(s)	121, 439, 521, 902, 1034, 1123, 1149, 1169, 1181
AluI	AGCT	9 cut(s)	121, 439, 521, 902, 1034, 1123, 1149, 1169, 1181
Alw26I	GTCTC	1 cut(s)	856
AlwI	GGATC	2 cut(s)	1424, 1460
Ama87I	CYCGRG	1 cut(s)	163
Aor13HI	TCCGGA	1 cut(s)	15
Aor51HI	AGCGCT	1 cut(s)	681
AoxI	GGCC	3 cut(s)	586, 790, 1621
ApeKI	GCWGC	1 cut(s)	677
ApoI	RAATTY	3 cut(s)	328, 989, 1542
AseI	ATTAAT	1 cut(s)	1089
Asp700I	GAANNNNTTC	1 cut(s)	758
AspLEI	GCGC	2 cut(s)	682, 912
AspS9I	GGNCC	5 cut(s)	167, 287, 596, 1441, 1622
AsuC2I	CCSGG	2 cut(s)	164, 165
AsuHPI	GGTGA	4 cut(s)	203, 205, 268, 1063
AsuII	TTCGAA	2 cut(s)	1006, 1019
AvaI	CYCGRG	1 cut(s)	163
AvaII	GGWCC	4 cut(s)	167, 287, 596, 1441
BaeGI	GKGCMC	1 cut(s)	717
BalI	TGGCCA	1 cut(s)	588
BanI	GGYRCC	1 cut(s)	416
BanII	GRGCYC	1 cut(s)	1590
BbvI	GCAGC	1 cut(s)	689
BccI	CCATC	5 cut(s)	278, 597, 1386, 1500, 1588
BciT130I	CCWGG	5 cut(s)	321, 594, 606, 789, 1539
BcnI	CCSGG	2 cut(s)	164, 165
BcoDI	GTCTC	1 cut(s)	856
BfaI	CTAG	3 cut(s)	440, 1124, 1669
BfmI	CTRYAG	2 cut(s)	1164, 1189
BfoI	RGCGCY	1 cut(s)	683
BisI	GCNGC	1 cut(s)	678
BlsI	GCNGC	1 cut(s)	679
BmcAI	AGTACT	1 cut(s)	839
Bme1390I	CCNGG	7 cut(s)	164, 165, 321, 594, 606, 789, 1539
Bme18I	GGWCC	4 cut(s)	167, 287, 596, 1441
BmeT110I	CYCGRG	1 cut(s)	163
BmgT120I	GGNCC	5 cut(s)	167, 287, 596, 1441, 1622
BmiI	GGNNCC	4 cut(s)	168, 418, 598, 1443
BmrFI	CCNGG	7 cut(s)	164, 165, 321, 594, 606, 789, 1539
BmsI	GCATC	5 cut(s)	559, 675, 730, 963, 1146
Bpu14I	TTCGAA	2 cut(s)	1006, 1019
BpuEI	CTTGAG	2 cut(s)	453, 1574
BpuMI	CCSGG	2 cut(s)	164, 165
Bsa29I	ATCGAT	2 cut(s)	864, 1464
BsaJI	CCNNGG	4 cut(s)	72, 163, 220, 1537
BsaWI	WCCGGW	2 cut(s)	15, 1468
BsaXI	ACNNNNNCTCC	2 cut(s)	1243, 1273
Bsc4I	CCNNNNNNNGG	5 cut(s)	52, 440, 501, 605, 1502
Bse1I	ACTGG	4 cut(s)	251, 1258, 1490, 1504
Bse3DI	GCAATG	1 cut(s)	905
BseAI	TCCGGA	1 cut(s)	15
BseBI	CCWGG	5 cut(s)	321, 594, 606, 789, 1539
BseCI	ATCGAT	2 cut(s)	864, 1464
BseDI	CCNNGG	4 cut(s)	72, 163, 220, 1537
BseGI	GGATG	4 cut(s)	589, 954, 1369, 1511
BseLI	CCNNNNNNNGG	5 cut(s)	52, 440, 501, 605, 1502
BseMI	GCAATG	1 cut(s)	905
BseMII	CTCAG	1 cut(s)	632
BseNI	ACTGG	4 cut(s)	251, 1258, 1490, 1504
BseRI	GAGGAG	2 cut(s)	951, 1251
BseSI	GKGCMC	1 cut(s)	717
BseXI	GCAGC	1 cut(s)	689
BseYI	CCCAGC	2 cut(s)	710, 1030
BshFI	GGCC	3 cut(s)	588, 792, 1623
BshNI	GGYRCC	1 cut(s)	416
BshVI	ATCGAT	2 cut(s)	864, 1464
BsiHKCI	CYCGRG	1 cut(s)	163
BsiSI	CCGG	4 cut(s)	16, 53, 164, 1469
BslFI	GGGAC	2 cut(s)	180, 1423
BslI	CCNNNNNNNGG	5 cut(s)	52, 440, 501, 605, 1502
BsmAI	GTCTC	1 cut(s)	856
BsmFI	GGGAC	2 cut(s)	180, 1423
BsnI	GGCC	3 cut(s)	588, 792, 1623
BsoBI	CYCGRG	1 cut(s)	163
Bsp119I	TTCGAA	2 cut(s)	1006, 1019
Bsp1286I	GDGCHC	2 cut(s)	717, 1590
Bsp13I	TCCGGA	1 cut(s)	15
Bsp143I	GATC	3 cut(s)	1429, 1465, 1654
Bsp19I	CCATGG	1 cut(s)	220
BspANI	GGCC	3 cut(s)	588, 792, 1623
BspCNI	CTCAG	1 cut(s)	631
BspDI	ATCGAT	2 cut(s)	864, 1464
BspEI	TCCGGA	1 cut(s)	15
BspLI	GGNNCC	4 cut(s)	168, 418, 598, 1443
BspPI	GGATC	2 cut(s)	1424, 1460
BspQI	GCTCTTC	2 cut(s)	619, 1176
BspT104I	TTCGAA	2 cut(s)	1006, 1019
BspT107I	GGYRCC	1 cut(s)	416
BsrDI	GCAATG	1 cut(s)	905
BsrI	ACTGG	4 cut(s)	251, 1258, 1490, 1504
BssECI	CCNNGG	4 cut(s)	72, 163, 220, 1537
BssMI	GATC	3 cut(s)	1429, 1465, 1654
BssT1I	CCWWGG	2 cut(s)	72, 220
Bst2UI	CCWGG	5 cut(s)	321, 594, 606, 789, 1539
Bst4CI	ACNGT	6 cut(s)	148, 199, 727, 1075, 1324, 1486
Bst6I	CTCTTC	2 cut(s)	619, 1176
BstBI	TTCGAA	2 cut(s)	1006, 1019
BstC8I	GCNNGC	2 cut(s)	381, 1121
BstDEI	CTNAG	2 cut(s)	398, 618
BstDSI	CCRYGG	1 cut(s)	220
BstEII	GGTNACC	1 cut(s)	211
BstF5I	GGATG	4 cut(s)	589, 954, 1369, 1511
BstH2I	RGCGCY	1 cut(s)	683
BstHHI	GCGC	2 cut(s)	682, 912
BstKTI	GATC	3 cut(s)	1432, 1468, 1657
BstMAI	GTCTC	1 cut(s)	856
BstMBI	GATC	3 cut(s)	1429, 1465, 1654
BstNI	CCWGG	5 cut(s)	321, 594, 606, 789, 1539
BstNSI	RCATGY	3 cut(s)	383, 638, 1107
BstPI	GGTNACC	1 cut(s)	211
BstSCI	CCNGG	7 cut(s)	162, 163, 319, 592, 604, 787, 1537
BstSFI	CTRYAG	2 cut(s)	1164, 1189
BstSLI	GKGCMC	1 cut(s)	717
BstV1I	GCAGC	1 cut(s)	689
BstXI	CCANNNNNNTGG	3 cut(s)	251, 1385, 1545
Bsu15I	ATCGAT	2 cut(s)	864, 1464
BsuRI	GGCC	3 cut(s)	588, 792, 1623
BsuTUI	ATCGAT	2 cut(s)	864, 1464
BtgI	CCRYGG	1 cut(s)	220
BtsCI	GGATG	4 cut(s)	589, 954, 1369, 1511
BtsI	GCAGTG	1 cut(s)	1344
BtsIMutI	CAGTG	6 cut(s)	153, 244, 1251, 1344, 1491, 1497
Cac8I	GCNNGC	2 cut(s)	381, 1121
CfoI	GCGC	2 cut(s)	682, 912
Cfr13I	GGNCC	5 cut(s)	167, 287, 596, 1441, 1622
Cfr9I	CCCGGG	1 cut(s)	163
ClaI	ATCGAT	2 cut(s)	864, 1464
Csp6I	GTAC	6 cut(s)	838, 919, 1040, 1257, 1290, 1312
CviAII	CATG	9 cut(s)	221, 251, 380, 413, 635, 1095, 1104, 1385, 1581
CviQI	GTAC	6 cut(s)	838, 919, 1040, 1257, 1290, 1312
DdeI	CTNAG	2 cut(s)	398, 618
DpnI	GATC	3 cut(s)	1431, 1467, 1656
DpnII	GATC	3 cut(s)	1429, 1465, 1654
EaeI	YGGCCR	1 cut(s)	586
Eam1104I	CTCTTC	2 cut(s)	619, 1176
EarI	CTCTTC	2 cut(s)	619, 1176
Eco130I	CCWWGG	2 cut(s)	72, 220
Eco24I	GRGCYC	1 cut(s)	1590
Eco32I	GATATC	1 cut(s)	868
Eco47I	GGWCC	4 cut(s)	167, 287, 596, 1441
Eco47III	AGCGCT	1 cut(s)	681
Eco57I	CTGAAG	1 cut(s)	76
Eco88I	CYCGRG	1 cut(s)	163
Eco91I	GGTNACC	1 cut(s)	211
EcoO109I	RGGNCCY	2 cut(s)	596, 1441
EcoO65I	GGTNACC	1 cut(s)	211
EcoRII	CCWGG	5 cut(s)	319, 592, 604, 787, 1537
EcoRV	GATATC	1 cut(s)	868
EcoT14I	CCWWGG	2 cut(s)	72, 220
EcoT22I	ATGCAT	1 cut(s)	1557
EcoT38I	GRGCYC	1 cut(s)	1590
ErhI	CCWWGG	2 cut(s)	72, 220
FaeI	CATG	9 cut(s)	224, 254, 383, 416, 638, 1098, 1107, 1388, 1584
FaqI	GGGAC	2 cut(s)	180, 1423
FatI	CATG	9 cut(s)	220, 250, 379, 412, 634, 1094, 1103, 1384, 1580
FblI	GTMKAC	1 cut(s)	1206
Fnu4HI	GCNGC	1 cut(s)	678
FokI	GGATG	4 cut(s)	576, 941, 1356, 1518
FriOI	GRGCYC	1 cut(s)	1590
Fsp4HI	GCNGC	1 cut(s)	678
FspBI	CTAG	3 cut(s)	440, 1124, 1669
GlaI	GCGC	2 cut(s)	681, 911
GluI	GCNGC	1 cut(s)	678
GsaI	CCCAGC	2 cut(s)	714, 1034
HaeII	RGCGCY	1 cut(s)	683
HaeIII	GGCC	3 cut(s)	588, 792, 1623
HapII	CCGG	4 cut(s)	16, 53, 164, 1469
HhaI	GCGC	2 cut(s)	682, 912
Hin1II	CATG	9 cut(s)	224, 254, 383, 416, 638, 1098, 1107, 1388, 1584
Hin6I	GCGC	2 cut(s)	680, 910
HinP1I	GCGC	2 cut(s)	680, 910
HincII	GTYRAC	1 cut(s)	1111
HindII	GTYRAC	1 cut(s)	1111
HindIII	AAGCTT	1 cut(s)	1179
HinfI	GANTC	7 cut(s)	19, 68, 480, 998, 1203, 1366, 1521
HpaI	GTTAAC	1 cut(s)	1111
HpaII	CCGG	4 cut(s)	16, 53, 164, 1469
HphI	GGTGA	4 cut(s)	203, 205, 268, 1063
Hpy166II	GTNNAC	5 cut(s)	345, 921, 1111, 1207, 1609
Hpy188I	TCNGA	6 cut(s)	496, 511, 568, 1329, 1520, 1654
Hpy188III	TCNNGA	7 cut(s)	16, 470, 703, 946, 1276, 1433, 1591
Hpy8I	GTNNAC	5 cut(s)	345, 921, 1111, 1207, 1609
Hpy99I	CGWCG	1 cut(s)	1324
HpyAV	CCTTC	5 cut(s)	182, 952, 1013, 1613, 1659
HpyCH4III	ACNGT	6 cut(s)	148, 199, 727, 1075, 1324, 1486
HpyCH4IV	ACGT	2 cut(s)	1272, 1451
HpyCH4V	TGCA	6 cut(s)	182, 383, 1514, 1555, 1573, 1639
HpyF3I	CTNAG	2 cut(s)	398, 618
HpySE526I	ACGT	2 cut(s)	1272, 1451
Hsp92II	CATG	9 cut(s)	224, 254, 383, 416, 638, 1098, 1107, 1388, 1584
HspAI	GCGC	2 cut(s)	680, 910
Kpn2I	TCCGGA	1 cut(s)	15
KspAI	GTTAAC	1 cut(s)	1111
Kzo9I	GATC	3 cut(s)	1429, 1465, 1654
LguI	GCTCTTC	2 cut(s)	619, 1176
LmnI	GCTCC	1 cut(s)	1116
Lsp1109I	GCAGC	1 cut(s)	689
LweI	GCATC	5 cut(s)	559, 675, 730, 963, 1146
MaeI	CTAG	3 cut(s)	440, 1124, 1669
MaeII	ACGT	2 cut(s)	1272, 1451
MaeIII	GTNAC	4 cut(s)	191, 211, 1097, 1335
MalI	GATC	3 cut(s)	1431, 1467, 1656
MboI	GATC	3 cut(s)	1429, 1465, 1654
MboII	GAAGA	7 cut(s)	118, 606, 691, 1163, 1166, 1373, 1649
MfeI	CAATTG	1 cut(s)	873
MhlI	GDGCHC	2 cut(s)	717, 1590
MlsI	TGGCCA	1 cut(s)	588
MluNI	TGGCCA	1 cut(s)	588
MlyI	GAGTC	4 cut(s)	77, 992, 1212, 1375
MmeI	TCCRAC	1 cut(s)	1057
Mox20I	TGGCCA	1 cut(s)	588
Mph1103I	ATGCAT	1 cut(s)	1557
MroI	TCCGGA	1 cut(s)	15
MroXI	GAANNNNTTC	1 cut(s)	758
MscI	TGGCCA	1 cut(s)	588
MseI	TTAA	8 cut(s)	842, 1046, 1089, 1110, 1137, 1245, 1269, 1455
MslI	CAYNNNNRTG	2 cut(s)	249, 1383
Msp20I	TGGCCA	1 cut(s)	588
MspI	CCGG	4 cut(s)	16, 53, 164, 1469
MspR9I	CCNGG	7 cut(s)	164, 165, 321, 594, 606, 789, 1539
MunI	CAATTG	1 cut(s)	873
MvaI	CCWGG	5 cut(s)	321, 594, 606, 789, 1539
NciI	CCSGG	2 cut(s)	164, 165
NcoI	CCATGG	1 cut(s)	220
NdeII	GATC	3 cut(s)	1429, 1465, 1654
NlaIII	CATG	9 cut(s)	224, 254, 383, 416, 638, 1098, 1107, 1388, 1584
NlaIV	GGNNCC	4 cut(s)	168, 418, 598, 1443
NmuCI	GTSAC	3 cut(s)	191, 211, 1097
NsiI	ATGCAT	1 cut(s)	1557
NspI	RCATGY	3 cut(s)	383, 638, 1107
NspV	TTCGAA	2 cut(s)	1006, 1019
PaeI	GCATGC	1 cut(s)	383
PciI	ACATGT	2 cut(s)	634, 1103
PciSI	GCTCTTC	2 cut(s)	619, 1176
PdmI	GAANNNNTTC	1 cut(s)	758
PfeI	GAWTC	3 cut(s)	19, 480, 1521
PflMI	CCANNNNNTGG	1 cut(s)	1502
PfoI	TCCNGGA	1 cut(s)	592
PkrI	GCNGC	1 cut(s)	679
PleI	GAGTC	4 cut(s)	76, 992, 1211, 1374
PpsI	GAGTC	4 cut(s)	76, 992, 1211, 1374
PpuMI	RGGWCCY	2 cut(s)	596, 1441
PscI	ACATGT	2 cut(s)	634, 1103
PshBI	ATTAAT	1 cut(s)	1089
Psp1406I	AACGTT	1 cut(s)	1451
Psp5II	RGGWCCY	2 cut(s)	596, 1441
Psp6I	CCWGG	5 cut(s)	319, 592, 604, 787, 1537
PspEI	GGTNACC	1 cut(s)	211
PspFI	CCCAGC	2 cut(s)	710, 1030
PspGI	CCWGG	5 cut(s)	319, 592, 604, 787, 1537
PspN4I	GGNNCC	4 cut(s)	168, 418, 598, 1443
PspPI	GGNCC	5 cut(s)	167, 287, 596, 1441, 1622
PspPPI	RGGWCCY	2 cut(s)	596, 1441
RsaI	GTAC	6 cut(s)	839, 920, 1041, 1258, 1291, 1313
RsaNI	GTAC	6 cut(s)	838, 919, 1040, 1257, 1290, 1312
RseI	CAYNNNNRTG	2 cut(s)	249, 1383
SapI	GCTCTTC	2 cut(s)	619, 1176
SaqAI	TTAA	8 cut(s)	842, 1046, 1089, 1110, 1137, 1245, 1269, 1455
SatI	GCNGC	1 cut(s)	678
Sau3AI	GATC	3 cut(s)	1429, 1465, 1654
Sau96I	GGNCC	5 cut(s)	167, 287, 596, 1441, 1622
ScaI	AGTACT	1 cut(s)	839
SchI	GAGTC	4 cut(s)	77, 992, 1212, 1375
ScrFI	CCNGG	7 cut(s)	164, 165, 321, 594, 606, 789, 1539
SduI	GDGCHC	2 cut(s)	717, 1590
SfaNI	GCATC	5 cut(s)	559, 675, 730, 963, 1146
SfcI	CTRYAG	2 cut(s)	1164, 1189
SfuI	TTCGAA	2 cut(s)	1006, 1019
SinI	GGWCC	4 cut(s)	167, 287, 596, 1441
SmaI	CCCGGG	1 cut(s)	165
SmiMI	CAYNNNNRTG	2 cut(s)	249, 1383
SmlI	CTYRAG	2 cut(s)	468, 1589
SmoI	CTYRAG	2 cut(s)	468, 1589
SphI	GCATGC	1 cut(s)	383
SspMI	CTAG	3 cut(s)	440, 1124, 1669
StyD4I	CCNGG	7 cut(s)	162, 163, 319, 592, 604, 787, 1537
StyI	CCWWGG	2 cut(s)	72, 220
TaaI	ACNGT	6 cut(s)	148, 199, 727, 1075, 1324, 1486
TaiI	ACGT	2 cut(s)	1275, 1454
TaqI	TCGA	8 cut(s)	79, 738, 864, 996, 1006, 1019, 1319, 1464
TatI	WGTACW	2 cut(s)	837, 918
TfiI	GAWTC	3 cut(s)	19, 480, 1521
Tru1I	TTAA	8 cut(s)	842, 1046, 1089, 1110, 1137, 1245, 1269, 1455
Tru9I	TTAA	8 cut(s)	842, 1046, 1089, 1110, 1137, 1245, 1269, 1455
TscAI	CASTG	6 cut(s)	153, 251, 1258, 1351, 1491, 1497
TseFI	GTSAC	3 cut(s)	191, 211, 1097
TseI	GCWGC	1 cut(s)	677
Tsp45I	GTSAC	3 cut(s)	191, 211, 1097
TspDTI	ATGAA	4 cut(s)	17, 322, 850, 1373
TspMI	CCCGGG	1 cut(s)	163
TspRI	CASTG	6 cut(s)	153, 251, 1258, 1351, 1491, 1497
Van91I	CCANNNNNTGG	1 cut(s)	1502
VpaK11BI	GGWCC	4 cut(s)	167, 287, 596, 1441
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	3 cut(s)	328, 989, 1542
XceI	RCATGY	3 cut(s)	383, 638, 1107
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1283, 1503
XmaI	CCCGGG	1 cut(s)	163
XmiI	GTMKAC	1 cut(s)	1206
XmnI	GAANNNNTTC	1 cut(s)	758
XspI	CTAG	3 cut(s)	440, 1124, 1669
ZrmI	AGTACT	1 cut(s)	839
Zsp2I	ATGCAT	1 cut(s)	1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.