Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0008055

Physical Location & Seq

Genomic Coordinates Reverse (-)

24054432 .. 24060800

Gene Structure 6369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g22920.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3630 bp

ATGTCGAGCCCTCCTCCGCCTTCTACAAACCGGCCGCTGATTTCCATCTCCGACGACAAATCAGACCCCGGAACGACGTCTTCCGTCTCCTCCCCGACTCAACAGCCCTCCCCCTCCAGAGCCAAGCTCCTTAAGATCCCTCAAATCCCGATTCAGCGAAGCACTAGGCACACGATCCACGAAGACGAGGAATTTGAAGACGACGAGGAAGATGAGGACGATGATAGTGCGGAGCGCAGAGCAGACGATCCGCCTATCGTCTTGCCGTCTTCGCTCGGCCTCAATCACATTCGGACTCGGTCGGCTCCGTCACCGCTTCGATTCTCTTCCTCCGTTTGCCCGCCGTTGAATTTCGGCGATGTATCGAGCAAGGTTAAGTACACCGTCAAACCAAAACCTAAACTCGCGCCGTTACAACCAGTGTATTTTTCTAAAATTTTAATTTGCGATTTCTTTATAGCGGAATCTGTGCAGATCGATCAATCAAAATCGCTCAGAAATGCATCACTACTCAATCCAGTGTTGGAGGGTAATCATGCAGCCTTTTCAAAGGAAATGCAGTCGCCGCGTTTTCAGGCAATACTGCGTGTTACGAGTGGAAGAAAAAAGAGAACACCTGAAATTAAGAGTTTCTCTCATGAGCTCAACTCCAAAGGAGTTCGAGCATTTCCTCTGTGGAAGTCTCGTGCTTTCGGGCATATGGAGATTATGGTGGCGCTCAAGGCAAGATTTGAGAAGTTAAAGGAAGAGGTTGACTTTGATTTAGGCGCATTTGCTGGTGATTTGGTCGGAATGCTTGAAAAGTCTACACAGTCTAATCCTGAATGGAAAGAGAACTTTGAGGATTTGTTGGTTATCGCCCGGAGGTGTGCAAAGATGTCGCCTGGTGAATTTTGGGTCAAATGTGAAGGCATTGTTCAGAGTTTGGATGACCGGCGTCAAGAGCTACCAATGGGAGCCCTCAAACAAGCGCACACCCGTCTTCTTTTTATTCTCACTCGGTGCACACGGCTTGTGCAGTTCCAGAAAGAGAGTGGCTATGAGGAAGAGCACATTCTCAGTCTTCATCAGTTCAGTGATCTTGGTGTTTATCCAGAACAAATTTTGCAGGCTGCACAGCAGAGCTATAGCGGTTCACTGGGTGGGAAGGAAATAAATGAGAAGCAAATGAAGAAGTCTCGTGAGCAGGAAAAAGTTAGTGGAGCTGAAGAAGTGGAGGTTTGCACTGCCAAAAGTGTTGAATCTACTGGCAGCTATAGGATGTCCTCTTGGAAAAAACTTCCATCTGCTGCTGAGAAAAATCAGAAAGGCAATGATGTTGCTGACACACAATCAAAGGAAAAATCAGATCGTTTGCATACCAAAGATGACACAAAAACTTGTGGTGACTACAGTACAGAAAATTTGGATACTTCATGCCATCCTGAACACTCAGAGGTGTCTGCAAGTGCACAAAAAGTCTCTTGGGGAATATGGATGGACCAGCAGAATGTTGCATATGAAAATGTGATGATTTGTCGAATATGTGAGGTTGAAATACCAACTGTACATGTAGAGGAACACTCTCGTATATGTACGATTGCTGATAGGTGTGACTTGAAGGGTTTAACTGTGAATGAACGACTTGAAAGAGTTGCTGAAGCTCTTCAAAGGATAATGGAATCTTGGACACCAAAAGGCACTGAAACTCGAGGAAATTATGATGCTGCAAGAGTGTATCCCTCACAGATGCATGAAGATTTAGATGAGTTGTCACCAAAGCGAATTGACTTGTCTCGATTCTCCGAAGGCAGTCTTGATTGCATTCCTGGTGTTGACAACTCTTATGTTATGGAAGATCTGAATGTTTTGCCTGACATCTCATGTGATGCACGTTCTGATTTGATACCTGAACAAGGCACCAGAACCTCGTCAGCAGGAAGTTCGACACCAAGATCACCATTACAAACACCAAGAACCAGTCATATTGAAATGCTGCTGAGTGGAGGGAGAGCAATACCAGAACTTGAGAGTTATCAGCAGATACACAATCTACTGGACATCACTCGTTCTGTTGCAAATGTTAGCAATTGTGACTACACTGCATTGGAGTATATGCTTGAACGACTGGAAGACCTAAAATATGCTATCCAGGACAGGAAGGTGGATGCACTCGTTGTAGAGACTTTTGGAAGGCGTATTGAAAAATTGCTGCAGGAAAAATATGTACATCTTTGTGGGCAGATAGAAGATGAAAAATTGGATTCATCAAATGGTATGGCTGATGAAGAAAGTTCAGTCGAAGATGAAGCCGTTCGTAGTCTACGTGCCAGCCCCATCAATCCATGTTCTAAGGATCGAACTTCTATTGAAGATTTTGAGACAATAAAACCAATAAGCAGGGGTGCATTTGGACGAGTTTTTCTTGCTAGAAAAAGAGCGACTGGTGACTTATTTGCTATAAAGGTATTGAAGAAGGCTGATATGATCCGTAAAAATGCTGTTGAGAGTATTTTGGCGGAGCGTAACATCCTTATATTGGTCCGCAATCCTTTTGTGGTGAGTGGGTCCCCATGTATTTTTCACTTAAGAATGCATTGTCCGATTTTTCTATTCTTTCACATGCACGGAAAATCTTTATCTGGTCATGGAGTACTTAAATGGTGGATCGATCTTTACTCTTTATTGAGAAATCTAGGCTGCTTGGATGAAGATATGGCCCGTGTATATATTGCAGAAGTTGTTCTTGCTTTGGAGTATTTGCATTCATTAAACGTTATCCACAGAGACTTGAAGCCAGACAACCTGTTGATTGGTCAAGATGGTCATATCAAGTTGACAGATTTTGGGCTCTCCAACGTTGGTCTAATCAGCAGCACTGATGACTTATCAGGTCCATCAGTTAGTGGTACTGGTTTTGTCCCAGATGATGAACCAAAATCTGAGTCTTCATCGGAAAGGGCACAGCGCCAAAAGCATTCAGTCGTTGGGACCCCTGATTATTTGGCACCTGAAATACTTCTTGGCATGGGGCATGGTGCAACTGCTGATTGGTGGTCTGTGGGGGTTATTCTTTTTGAGCTGCTTGTCGGTATTCCACCATTCAATGCAGAACATCCACAGCAAATTTTCAACAATATAATAAACAGAGACATCCCCTGGCCTAAAGTACCTGAGGAGATGAGCCTTGAGGCGTACGATTTGATTGACAAACTGCTTACCGACAACCCAGTTCAAAGACTTGGAGCAACAGGTACCAGGGAGGTGAAGCAACATTCTTTTTTCAAGGATATTAACTGGGACACGCTTGCTAGGCAGAAGGCTATGTTCATACCATCTACCGATGCACACGATACAAGTTATTTCATGAGCCGGTACGCATGGAACCCAGAAGATGAACATGTTAATGGCACCAGTGACTTTGATGACATGACTGAAACATGCAGCAGTGGTTCATGTAGCAACATACAAGACGAAGATGGGGATGAATGTGGTAGTTTGGTGGACTTTGGTGCTCCAACTGTTGACGTGCAGTACACTTTTAGTAATTTTTCATTCAAGAACTTGTCACAGCTGGCTTCTATCAACTATGATCTTCTTGTGAAGAACGCCAAGGAGTCACCGGATGCCTCTAAGTCATCCATGCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

1210

Amino Acids

135.46

Weight (kDa)

5.27

Isoelectric Point (pI)

50.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62310
fragaria_vesca	FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920
malus_domestica	MD00G1104600.v1.1 MD07G1256300.v1.1
prunus_persica	Prupe.2G255800_v2.0.a1 Prupe.2G280200_v2.0.a1 Prupe.2G280200_v2.0.a1
pyrus_communis	pycom01g19590 pycom07g22920
rosa_chinensis	RchiOBHm_Chr1g0374881
rosa_laevigata	RLG00000026710
rosa_multiflora	Rmu_sc0003145.1_g000005 Rmu_sc0004947.1_g000030
rosa_roxburghii	Rroxscaffold_4G00283210
rosa_rugosa	Rorug01G0385500
rosa_samantha	Rh1AG397100 Rh1BG360900 Rh1CG374600 Rh1DG391900
rosa_wichuraiana	Rw1G035210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	80
Acc65I	GGTACC	1 cut(s)	3233
AccB1I	GGYRCC	4 cut(s)	1898, 2986, 3233, 3389
AccI	GTMKAC	2 cut(s)	806, 2302
AccII	CGCG	2 cut(s)	407, 568
AclI	AACGTT	2 cut(s)	2754, 2838
AclWI	GGATC	6 cut(s)	130, 169, 242, 2343, 2461, 2654
AcoI	YGGCCR	1 cut(s)	32
AcsI	RAATTY	7 cut(s)	191, 349, 435, 890, 1101, 1402, 3105
AcuI	CTGAAG	2 cut(s)	1227, 1659
AcyI	GRCGYC	2 cut(s)	77, 937
AdeI	CACNNNGTG	2 cut(s)	1002, 1142
AfiI	CCNNNNNNNGG	2 cut(s)	1895, 2518
AflII	CTTAAG	2 cut(s)	131, 2566
AflIII	ACRYGT	2 cut(s)	1549, 3379
AjiI	CACGTC	1 cut(s)	3508
AjnI	CCWGG	5 cut(s)	883, 1807, 2130, 3137, 3236
AjuI	GAANNNNNNNTTGG	2 cut(s)	2985, 3017
AluBI	AGCT	9 cut(s)	127, 643, 946, 1125, 1205, 1254, 1643, 3061, 3553
AluI	AGCT	9 cut(s)	127, 643, 946, 1125, 1205, 1254, 1643, 3061, 3553
Alw21I	GWGCWC	5 cut(s)	645, 1007, 1053, 1453, 3496
Alw26I	GTCTC	9 cut(s)	91, 687, 1182, 1465, 1779, 2156, 2354, 2760, 3123
Alw44I	GTGCAC	2 cut(s)	1003, 1449
AlwI	GGATC	6 cut(s)	130, 169, 242, 2343, 2461, 2654
Ama87I	CYCGRG	1 cut(s)	1689
AoxI	GGCC	4 cut(s)	32, 277, 2697, 3140
ApaLI	GTGCAC	2 cut(s)	1003, 1449
ApoI	RAATTY	7 cut(s)	191, 349, 435, 890, 1101, 1402, 3105
ArsI	GACNNNNNNTTYG	4 cut(s)	176, 208, 2909, 2941
Asp700I	GAANNNNTTC	4 cut(s)	1644, 2292, 2721, 2997
Asp718I	GGTACC	1 cut(s)	3233
AspLEI	GCGC	6 cut(s)	237, 409, 718, 770, 973, 2949
AspS9I	GGNCC	6 cut(s)	1480, 2521, 2547, 2698, 2873, 2970
AsuC2I	CCSGG	2 cut(s)	69, 862
AvaI	CYCGRG	1 cut(s)	1689
AvaII	GGWCC	5 cut(s)	1480, 2521, 2547, 2873, 2970
AxyI	CCTNAGG	1 cut(s)	3153
BaeGI	GKGCMC	3 cut(s)	1007, 1453, 2944
BanI	GGYRCC	4 cut(s)	1898, 2986, 3233, 3389
BanII	GRGCYC	4 cut(s)	11, 645, 961, 2832
BauI	CACGAG	2 cut(s)	684, 1179
BbsI	GAAGAC	8 cut(s)	72, 189, 204, 261, 974, 1055, 2118, 2919
Bbv12I	GWGCWC	5 cut(s)	645, 1007, 1053, 1453, 3496
BccI	CCATC	9 cut(s)	53, 1291, 1428, 1471, 2324, 2795, 2884, 3322, 3452
BceAI	ACGGC	6 cut(s)	250, 328, 394, 1025, 2276, 3610
BcgI	CGANNNNNNTGC	6 cut(s)	209, 243, 861, 895, 1905, 1939
BciT130I	CCWGG	5 cut(s)	885, 1809, 2132, 3139, 3238
BciVI	GTATCC	2 cut(s)	1402, 1728
BcnI	CCSGG	2 cut(s)	69, 862
BcoDI	GTCTC	9 cut(s)	91, 687, 1182, 1465, 1779, 2156, 2354, 2760, 3123
BfaI	CTAG	4 cut(s)	165, 2409, 2675, 3291
BfmI	CTRYAG	4 cut(s)	1126, 1255, 1390, 2192
BfoI	RGCGCY	2 cut(s)	719, 2950
BfrI	CTTAAG	2 cut(s)	131, 2566
BfuI	GTATCC	2 cut(s)	1402, 1728
BglII	AGATCT	1 cut(s)	1837
BmcAI	AGTACT	1 cut(s)	2634
Bme1390I	CCNGG	7 cut(s)	69, 862, 885, 1809, 2132, 3139, 3238
Bme18I	GGWCC	5 cut(s)	1480, 2521, 2547, 2873, 2970
BmeT110I	CYCGRG	1 cut(s)	1689
BmgBI	CACGTC	1 cut(s)	3508
BmgT120I	GGNCC	6 cut(s)	1480, 2521, 2547, 2698, 2873, 2970
BmrFI	CCNGG	7 cut(s)	69, 862, 885, 1809, 2132, 3139, 3238
BmrI	ACTGGG	3 cut(s)	1148, 3203, 3286
BmsI	GCATC	7 cut(s)	512, 1693, 1719, 1858, 2137, 3313, 3595
BmuI	ACTGGG	3 cut(s)	1148, 3203, 3286
BoxI	GACNNNNGTC	1 cut(s)	936
BpiI	GAAGAC	8 cut(s)	72, 189, 204, 261, 974, 1055, 2118, 2919
BplI	GAGNNNNNCTC	9 cut(s)	30, 111, 143, 619, 651, 632, 664, 1547, 1579
BpmI	CTGGAG	1 cut(s)	100
BpuEI	CTTGAG	3 cut(s)	704, 2027, 3188
BpuMI	CCSGG	2 cut(s)	69, 862
Bsa29I	ATCGAT	2 cut(s)	477, 2649
BsaAI	YACGTR	1 cut(s)	2306
BsaBI	GATNNNNATC	1 cut(s)	44
BsaHI	GRCGYC	2 cut(s)	77, 937
BsaJI	CCNNGG	4 cut(s)	67, 3137, 3237, 3591
BsaWI	WCCGGW	1 cut(s)	3601
Bsc4I	CCNNNNNNNGG	2 cut(s)	1895, 2518
Bse118I	RCCGGY	3 cut(s)	30, 933, 3351
Bse21I	CCTNAGG	1 cut(s)	3153
Bse3DI	GCAATG	1 cut(s)	1318
Bse8I	GATNNNNATC	1 cut(s)	44
BseBI	CCWGG	5 cut(s)	885, 1809, 2132, 3139, 3238
BseCI	ATCGAT	2 cut(s)	477, 2649
BseDI	CCNNGG	4 cut(s)	67, 3137, 3237, 3591
BseJI	GATNNNNATC	1 cut(s)	44
BseLI	CCNNNNNNNGG	2 cut(s)	1895, 2518
BseMI	GCAATG	1 cut(s)	1318
BseMII	CTCAG	7 cut(s)	508, 1072, 1284, 1446, 1970, 2913, 3144
BseRI	GAGGAG	2 cut(s)	79, 3170
BseSI	GKGCMC	3 cut(s)	1007, 1453, 2944
BseX3I	CGGCCG	1 cut(s)	32
BsgI	GTGCAG	4 cut(s)	491, 1037, 1098, 3530
Bsh1236I	CGCG	2 cut(s)	407, 568
Bsh1285I	CGRYCG	2 cut(s)	35, 302
BshFI	GGCC	4 cut(s)	34, 279, 2699, 3142
BshNI	GGYRCC	4 cut(s)	1898, 2986, 3233, 3389
BshVI	ATCGAT	2 cut(s)	477, 2649
BsiEI	CGRYCG	2 cut(s)	35, 302
BsiHKAI	GWGCWC	5 cut(s)	645, 1007, 1053, 1453, 3496
BsiHKCI	CYCGRG	1 cut(s)	1689
BsiSI	CCGG	6 cut(s)	31, 69, 862, 934, 3352, 3602
BsiWI	CGTACG	1 cut(s)	3174
BslFI	GGGAC	4 cut(s)	2533, 2885, 2983, 3293
BslI	CCNNNNNNNGG	2 cut(s)	1895, 2518
BsmAI	GTCTC	9 cut(s)	91, 687, 1182, 1465, 1779, 2156, 2354, 2760, 3123
BsmBI	CGTCTC	1 cut(s)	91
BsmFI	GGGAC	4 cut(s)	2533, 2885, 2983, 3293
BsmI	GAATGC	5 cut(s)	798, 1803, 2577, 2743, 2956
BsnI	GGCC	4 cut(s)	34, 279, 2699, 3142
BsoBI	CYCGRG	1 cut(s)	1689
Bsp1286I	GDGCHC	9 cut(s)	11, 645, 961, 1007, 1053, 1453, 2832, 2944, 3496
Bsp1407I	TGTACA	2 cut(s)	1546, 2206
BspANI	GGCC	4 cut(s)	34, 279, 2699, 3142
BspCNI	CTCAG	7 cut(s)	507, 1071, 1285, 1445, 1971, 2914, 3145
BspDI	ATCGAT	2 cut(s)	477, 2649
BspFNI	CGCG	2 cut(s)	407, 568
BspHI	TCATGA	2 cut(s)	637, 3345
BspMAI	CTGCAG	1 cut(s)	2196
BspPI	GGATC	6 cut(s)	130, 169, 242, 2343, 2461, 2654
BspQI	GCTCTTC	2 cut(s)	1041, 1650
BspT107I	GGYRCC	4 cut(s)	1898, 2986, 3233, 3389
BspTI	CTTAAG	2 cut(s)	131, 2566
BsrDI	GCAATG	1 cut(s)	1318
BsrFI	RCCGGY	3 cut(s)	30, 933, 3351
BsrGI	TGTACA	2 cut(s)	1546, 2206
BssAI	RCCGGY	3 cut(s)	30, 933, 3351
BssECI	CCNNGG	4 cut(s)	67, 3137, 3237, 3591
BssNI	GRCGYC	2 cut(s)	77, 937
BssSI	CACGAG	2 cut(s)	684, 1179
BssT1I	CCWWGG	1 cut(s)	3591
Bst2BI	CACGAG	2 cut(s)	684, 1179
Bst2UI	CCWGG	5 cut(s)	885, 1809, 2132, 3139, 3238
Bst4CI	ACNGT	6 cut(s)	385, 813, 1394, 1546, 1612, 3502
Bst6I	CTCTTC	4 cut(s)	331, 741, 1041, 1650
BstACI	GRCGYC	2 cut(s)	77, 937
BstAFI	CTTAAG	2 cut(s)	131, 2566
BstAUI	TGTACA	2 cut(s)	1546, 2206
BstBAI	YACGTR	1 cut(s)	2306
BstC8I	GCNNGC	5 cut(s)	341, 1110, 2311, 3288, 3555
BstDEI	CTNAG	9 cut(s)	494, 1058, 1293, 1432, 1979, 2331, 2922, 3153, 3612
BstENI	CCTNNNNNAGG	1 cut(s)	1893
BstFNI	CGCG	2 cut(s)	407, 568
BstH2I	RGCGCY	2 cut(s)	719, 2950
BstHHI	GCGC	6 cut(s)	237, 409, 718, 770, 973, 2949
BstMAI	GTCTC	9 cut(s)	91, 687, 1182, 1465, 1779, 2156, 2354, 2760, 3123
BstMCI	CGRYCG	2 cut(s)	35, 302
BstMWI	GCNNNNNNNGC	6 cut(s)	271, 565, 722, 943, 2953, 3292
BstNI	CCWGG	5 cut(s)	885, 1809, 2132, 3139, 3238
BstNSI	RCATGY	4 cut(s)	1553, 2605, 3383, 3423
BstPAI	GACNNNNGTC	1 cut(s)	936
BstSCI	CCNGG	7 cut(s)	67, 860, 883, 1807, 2130, 3137, 3236
BstSFI	CTRYAG	4 cut(s)	1126, 1255, 1390, 2192
BstSLI	GKGCMC	3 cut(s)	1007, 1453, 2944
BstUI	CGCG	2 cut(s)	407, 568
BstV2I	GAAGAC	8 cut(s)	72, 189, 204, 261, 974, 1055, 2118, 2919
BstX2I	RGATCY	2 cut(s)	135, 1837
BstYI	RGATCY	2 cut(s)	135, 1837
BstZI	CGGCCG	1 cut(s)	32
Bsu15I	ATCGAT	2 cut(s)	477, 2649
Bsu36I	CCTNAGG	1 cut(s)	3153
BsuI	GTATCC	2 cut(s)	1402, 1728
BsuRI	GGCC	4 cut(s)	34, 279, 2699, 3142
BsuTUI	ATCGAT	2 cut(s)	477, 2649
BtgZI	GCGATG	1 cut(s)	372
BtrI	CACGTC	1 cut(s)	3508
BtsI	GCAGTG	3 cut(s)	1224, 2079, 3433
Cac8I	GCNNGC	5 cut(s)	341, 1110, 2311, 3288, 3555
CciI	TCATGA	2 cut(s)	637, 3345
CfoI	GCGC	6 cut(s)	237, 409, 718, 770, 973, 2949
Cfr10I	RCCGGY	3 cut(s)	30, 933, 3351
Cfr13I	GGNCC	6 cut(s)	1480, 2521, 2547, 2698, 2873, 2970
ClaI	ATCGAT	2 cut(s)	477, 2649
CseI	GACGC	1 cut(s)	926
DdeI	CTNAG	9 cut(s)	494, 1058, 1293, 1432, 1979, 2331, 2922, 3153, 3612
DraIII	CACNNNGTG	2 cut(s)	1002, 1142
EaeI	YGGCCR	1 cut(s)	32
EagI	CGGCCG	1 cut(s)	32
Eam1104I	CTCTTC	4 cut(s)	331, 741, 1041, 1650
EarI	CTCTTC	4 cut(s)	331, 741, 1041, 1650
EciI	GGCGGA	3 cut(s)	6, 240, 2513
Ecl136II	GAGCTC	1 cut(s)	643
EclXI	CGGCCG	1 cut(s)	32
Eco130I	CCWWGG	1 cut(s)	3591
Eco24I	GRGCYC	4 cut(s)	11, 645, 961, 2832
Eco47I	GGWCC	5 cut(s)	1480, 2521, 2547, 2873, 2970
Eco52I	CGGCCG	1 cut(s)	32
Eco53kI	GAGCTC	1 cut(s)	643
Eco57I	CTGAAG	2 cut(s)	1227, 1659
Eco81I	CCTNAGG	1 cut(s)	3153
Eco88I	CYCGRG	1 cut(s)	1689
EcoICRI	GAGCTC	1 cut(s)	643
EcoNI	CCTNNNNNAGG	1 cut(s)	1893
EcoO109I	RGGNCCY	2 cut(s)	2547, 2970
EcoRII	CCWGG	5 cut(s)	883, 1807, 2130, 3137, 3236
EcoT14I	CCWWGG	1 cut(s)	3591
EcoT22I	ATGCAT	3 cut(s)	505, 1734, 2577
EcoT38I	GRGCYC	4 cut(s)	11, 645, 961, 2832
ErhI	CCWWGG	1 cut(s)	3591
Esp3I	CGTCTC	1 cut(s)	91
FalI	AAGNNNNNCTT	4 cut(s)	1779, 1811, 2709, 2741
FaqI	GGGAC	4 cut(s)	2533, 2885, 2983, 3293
FauI	CCCGC	1 cut(s)	348
FauNDI	CATATG	2 cut(s)	699, 1498
FblI	GTMKAC	2 cut(s)	806, 2302
FriOI	GRGCYC	4 cut(s)	11, 645, 961, 2832
FspBI	CTAG	4 cut(s)	165, 2409, 2675, 3291
GlaI	GCGC	6 cut(s)	236, 408, 717, 769, 972, 2948
GsuI	CTGGAG	1 cut(s)	100
HaeII	RGCGCY	2 cut(s)	719, 2950
HaeIII	GGCC	4 cut(s)	34, 279, 2699, 3142
HapII	CCGG	6 cut(s)	31, 69, 862, 934, 3352, 3602
HgaI	GACGC	1 cut(s)	926
HhaI	GCGC	6 cut(s)	237, 409, 718, 770, 973, 2949
Hin1I	GRCGYC	2 cut(s)	77, 937
Hin6I	GCGC	6 cut(s)	235, 407, 716, 768, 971, 2947
HinP1I	GCGC	6 cut(s)	235, 407, 716, 768, 971, 2947
HincII	GTYRAC	4 cut(s)	754, 1816, 2817, 3505
HindII	GTYRAC	4 cut(s)	754, 1816, 2817, 3505
HpaII	CCGG	6 cut(s)	31, 69, 862, 934, 3352, 3602
Hpy99I	CGWCG	3 cut(s)	56, 79, 206
HpyAV	CCTTC	9 cut(s)	30, 902, 1141, 1594, 1781, 2134, 2166, 2449, 3292
HpyCH4III	ACNGT	6 cut(s)	385, 813, 1394, 1546, 1612, 3502
HpyCH4IV	ACGT	6 cut(s)	77, 1873, 2305, 2754, 2838, 3507
HpyF10VI	GCNNNNNNNGC	6 cut(s)	271, 565, 722, 943, 2953, 3292
HpyF3I	CTNAG	9 cut(s)	494, 1058, 1293, 1432, 1979, 2331, 2922, 3153, 3612
HpySE526I	ACGT	6 cut(s)	77, 1873, 2305, 2754, 2838, 3507
Hsp92I	GRCGYC	2 cut(s)	77, 937
HspAI	GCGC	6 cut(s)	235, 407, 716, 768, 971, 2947
KflI	GGGWCCC	2 cut(s)	2547, 2970
KpnI	GGTACC	1 cut(s)	3237
LguI	GCTCTTC	2 cut(s)	1041, 1650
LmnI	GCTCC	8 cut(s)	132, 232, 310, 956, 1202, 2500, 3224, 3499
LweI	GCATC	7 cut(s)	512, 1693, 1719, 1858, 2137, 3313, 3595
MaeI	CTAG	4 cut(s)	165, 2409, 2675, 3291
MaeII	ACGT	6 cut(s)	77, 1873, 2305, 2754, 2838, 3507
MfeI	CAATTG	1 cut(s)	2068
MflI	RGATCY	2 cut(s)	135, 1837
MhlI	GDGCHC	9 cut(s)	11, 645, 961, 1007, 1053, 1453, 2832, 2944, 3496
MlyI	GAGTC	4 cut(s)	91, 289, 2933, 3605
MmeI	TCCRAC	5 cut(s)	75, 504, 769, 2859, 3521
Mph1103I	ATGCAT	3 cut(s)	505, 1734, 2577
MroXI	GAANNNNTTC	4 cut(s)	1644, 2292, 2721, 2997
MslI	CAYNNNNRTG	2 cut(s)	2214, 3384
MspA1I	CMGCKG	2 cut(s)	37, 3553
MspCI	CTTAAG	2 cut(s)	131, 2566
MspI	CCGG	6 cut(s)	31, 69, 862, 934, 3352, 3602
MspR9I	CCNGG	7 cut(s)	69, 862, 885, 1809, 2132, 3139, 3238
MunI	CAATTG	1 cut(s)	2068
Mva1269I	GAATGC	5 cut(s)	798, 1803, 2577, 2743, 2956
MvaI	CCWGG	5 cut(s)	885, 1809, 2132, 3139, 3238
MvnI	CGCG	2 cut(s)	407, 568
MwoI	GCNNNNNNNGC	6 cut(s)	271, 565, 722, 943, 2953, 3292
NciI	CCSGG	2 cut(s)	69, 862
NdeI	CATATG	2 cut(s)	699, 1498
NmeAIII	GCCGAG	1 cut(s)	255
NmuCI	GTSAC	9 cut(s)	309, 1385, 1592, 1752, 2072, 2426, 3395, 3546, 3597
NsiI	ATGCAT	3 cut(s)	505, 1734, 2577
NspI	RCATGY	4 cut(s)	1553, 2605, 3383, 3423
PaeR7I	CTCGAG	1 cut(s)	1689
PagI	TCATGA	2 cut(s)	637, 3345
PciI	ACATGT	2 cut(s)	1549, 3379
PciSI	GCTCTTC	2 cut(s)	1041, 1650
PcsI	WCGNNNNNNNCGW	1 cut(s)	2302
PctI	GAATGC	5 cut(s)	798, 1803, 2577, 2743, 2956
PdmI	GAANNNNTTC	4 cut(s)	1644, 2292, 2721, 2997
PfeI	GAWTC	7 cut(s)	151, 321, 464, 1241, 1661, 1779, 2243
Pfl23II	CGTACG	1 cut(s)	3174
PflFI	GACNNNGTC	1 cut(s)	298
PfoI	TCCNGGA	1 cut(s)	2130
PleI	GAGTC	4 cut(s)	91, 289, 2932, 3604
PpsI	GAGTC	4 cut(s)	91, 289, 2932, 3604
Ppu21I	YACGTR	1 cut(s)	2306
PpuMI	RGGWCCY	2 cut(s)	2547, 2970
PscI	ACATGT	2 cut(s)	1549, 3379
PshAI	GACNNNNGTC	1 cut(s)	936
Psp124BI	GAGCTC	1 cut(s)	645
Psp1406I	AACGTT	2 cut(s)	2754, 2838
Psp5II	RGGWCCY	2 cut(s)	2547, 2970
Psp6I	CCWGG	5 cut(s)	883, 1807, 2130, 3137, 3236
PspGI	CCWGG	5 cut(s)	883, 1807, 2130, 3137, 3236
PspLI	CGTACG	1 cut(s)	3174
PspPI	GGNCC	6 cut(s)	1480, 2521, 2547, 2698, 2873, 2970
PspPPI	RGGWCCY	2 cut(s)	2547, 2970
PspXI	VCTCGAGB	1 cut(s)	1689
PstI	CTGCAG	1 cut(s)	2196
PsuI	RGATCY	2 cut(s)	135, 1837
PsyI	GACNNNGTC	1 cut(s)	298
PvuII	CAGCTG	1 cut(s)	3553
RseI	CAYNNNNRTG	2 cut(s)	2214, 3384
SacI	GAGCTC	1 cut(s)	645
SapI	GCTCTTC	2 cut(s)	1041, 1650
Sau96I	GGNCC	6 cut(s)	1480, 2521, 2547, 2698, 2873, 2970
ScaI	AGTACT	1 cut(s)	2634
SchI	GAGTC	4 cut(s)	91, 289, 2933, 3605
ScrFI	CCNGG	7 cut(s)	69, 862, 885, 1809, 2132, 3139, 3238
SduI	GDGCHC	9 cut(s)	11, 645, 961, 1007, 1053, 1453, 2832, 2944, 3496
SfaNI	GCATC	7 cut(s)	512, 1693, 1719, 1858, 2137, 3313, 3595
SfcI	CTRYAG	4 cut(s)	1126, 1255, 1390, 2192
Sfr274I	CTCGAG	1 cut(s)	1689
SinI	GGWCC	5 cut(s)	1480, 2521, 2547, 2873, 2970
SlaI	CTCGAG	1 cut(s)	1689
SmiMI	CAYNNNNRTG	2 cut(s)	2214, 3384
SmlI	CTYRAG	6 cut(s)	131, 719, 1689, 2006, 2566, 3167
SmoI	CTYRAG	6 cut(s)	131, 719, 1689, 2006, 2566, 3167
SspMI	CTAG	4 cut(s)	165, 2409, 2675, 3291
SstI	GAGCTC	1 cut(s)	645
StyD4I	CCNGG	7 cut(s)	67, 860, 883, 1807, 2130, 3137, 3236
StyI	CCWWGG	1 cut(s)	3591
TaaI	ACNGT	6 cut(s)	385, 813, 1394, 1546, 1612, 3502
TaiI	ACGT	6 cut(s)	80, 1876, 2308, 2757, 2841, 3510
TaqII	GACCGA	1 cut(s)	288
TatI	WGTACW	6 cut(s)	378, 1394, 1546, 2206, 2632, 3513
TauI	GCSGC	2 cut(s)	37, 568
TfiI	GAWTC	7 cut(s)	151, 321, 464, 1241, 1661, 1779, 2243
TseFI	GTSAC	9 cut(s)	309, 1385, 1592, 1752, 2072, 2426, 3395, 3546, 3597
Tsp45I	GTSAC	9 cut(s)	309, 1385, 1592, 1752, 2072, 2426, 3395, 3546, 3597
TspGWI	ACGGA	5 cut(s)	73, 297, 322, 2459, 2622
Tth111I	GACNNNGTC	1 cut(s)	298
Vha464I	CTTAAG	2 cut(s)	131, 2566
VneI	GTGCAC	2 cut(s)	1003, 1449
VpaK11BI	GGWCC	5 cut(s)	1480, 2521, 2547, 2873, 2970
XagI	CCTNNNNNAGG	1 cut(s)	1893
XapI	RAATTY	7 cut(s)	191, 349, 435, 890, 1101, 1402, 3105
XceI	RCATGY	4 cut(s)	1553, 2605, 3383, 3423
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1031
XhoI	CTCGAG	1 cut(s)	1689
XmiI	GTMKAC	2 cut(s)	806, 2302
XmnI	GAANNNNTTC	4 cut(s)	1644, 2292, 2721, 2997
XspI	CTAG	4 cut(s)	165, 2409, 2675, 3291
ZraI	GACGTC	1 cut(s)	78
ZrmI	AGTACT	1 cut(s)	2634
Zsp2I	ATGCAT	3 cut(s)	505, 1734, 2577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.