Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003145.1

Orthogroup ID

OG0008055

Physical Location & Seq

Genomic Coordinates Reverse (-)

26920 .. 33271

Gene Structure 6352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003145.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3219 bp

atgtcgagcgatccaaatccaaacccaccgcctctgacctcgacctccgccgccggcaacgcagaccccgccgccgcatcgtctccgactcatccttctccctccagagccaagctccgtaagattcctcccattcctattcgccggagccccaggcatttggccgaggtcaacgaacaaagcgacgaagagggagacgatgatgaagatgacgacgacgacgatgattttagggaacgcagagagaccacgccgatcctattggctgcgtcgctagggctcaatcacatacggactcgatcggcgccgtcgccgctccggttctcttcctccgccggcgagcctctaattcccggtgaggaagcgaataatatgaactacacggtcaagtcaaagccccaaccagtgaaatatgtgcactctagtcaatcaaaatcgctgagaactccatcgccactcaatcctgtgttggagggtggtcaagctggtcttacaaaggaaatgcagtcgcctaggtttcaggcaatactgcgagttacgagtggacgaaagaagagaacacctgacatcaagagtttctctcatgagctaaattccaaaggggttagaccatttccggtgtggaagtcccgtgcattcgggcatatggaggtgacattaccttcacctgtggcaagatttgagaggttgaaggatgaggttgatgttgatttgggtgcatttgcgggtgatttggtgggtattcttgaaaagtcttcagagtctcaccctgaatggaaagagaattttgaggatttgctagttattgcccggcagtgtgcaaagatgtctcctaacgaattttggatcaagtgtgaaggcattgtacagaagttggatgaccggcgtcaagagctaccaatgggggccctgaaacaagcccatactcgtcttctttttattcttactcggtgcacacggcttgtgcagttccacaaagagagtggttatgaggaagagcacattcttagtcttcaccagctcagtgaccttggtgtttatccagaacaaattttggacggtgcagaacagaagtttagtggtccactgagtgggaaagatgcaaatgagaagcccaagaagtctcgtgagcaagaaatagctagtggagctgatggtgcggaggttagcactgccaagagcgttgaatctactggtagctataggatgtcatcttggaaaaaacttccatcggctgctgagaaaaagcagaaagtacctgattctgttgatacaccatcgaaggacaaatcagaacgtttgcatgccaaagaaattctggatactccatcatcccatcatgaacactcagagatgtccacaagtgcacaaagagtatcttgggtttcaattggggagcagcaaaatgttacatatgagaatttgatgatctgtcgtatatgtgaggttgaaataccaactgtccacgtagaggagcactctcgaatatgtacaattgctgacagatgtgacttgaagggcttaactgtgaatgaaagacttgaaagagttgctgaagctcttgaaaggataatggaatctcggacaacaaaaaatgttgatacacaagagacaagttttgatgctgcaaaagtgtatccatcaagtatccatgaagattttattgccaaaagaaaaaaaagtatccatgaagatttagatgacttatcacctaaacgaaatgacttgcctcaagacatgcttaattgtgttcctgatgctgacaattcttttgtcatggaagatcttaatattatgcctgacatgtcatgtgacgcacgttctgctttgacacctgaacaagggaccagaacctcatcagcaggtagctccactccaagatcgccacttttaacccctagaaccactcatattgaaatgctgttgagtggaaggggaacaataccagaacttgagaattgtcagcagatacacaagctactggatattgctcgttctgttgcaaatgttagcaattgtgaatacagtgcattggagtatatgcttgaccgactagaagacctaaaatatgctatccaggacaggaaggtggatgcccttgttgtagagacgtttggaagacgtattgaaaaattattgcaggaaaaatatgtacatctttgtgggcagatagaagatgagaaattggattcatcaaatggtatggcagacgaagaaagttcagtggaagatgatacagttcgtagtctacgtaccagccccatcaatccgtcttctaaggatcgaacatctattgaagattttgaaataataaaaccaataagcaggggtgcatttggacgagtttttcttgccagaaaacgagcgactggtgacttatttgctataaaggtattaaagaaggctgatatgattcgtaagaatgcagttgaaagtattttggcagagcgtaacatccttatattggttcgcaatccttttgtggtccgatttttctattccttcacatgcagggaaaatctttatctggtcatggagtacttaaatggtggagatctttactctttattgagaaatctaggctgcttagatgaagatatggcccgtttgacagattttgggctctcgaaggttggtctaatcagcagcactgatgacttagcaggtccatctgttggtgatactggttttgttggagatgatgaaccaaaaagtcaatcttcatctcagaggtcacagcgtcaaaaacattcagttgttggcacccccgattatttggcacctgaaatacttcttggcatgggacatagtgcaactgctgattggtggtctgtgggtgttatactgtttgagctacttgttggcattccaccattcaatgcagaacatccacaggctatgttcataccttcaacagatgcacatgatacaagttatttcatgagccggtacatatggaatccagaagatgagcatgttaatggaggcagtgactttgatgacctgactgaaacatgcagcagtactggttcatattatctagacgaagacggggatgagtgtggtagtttggcggacttcagtgctccagcccttgatgtgcagtactcatttagtaatttctcatttaagaacttgtctcagctggcttccatcaattatgatcttgtcgtgaagaccaaggagtcaccagaagcctccaagtcatctgttccatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0035556 GO:0036211 GO:0040007 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

1072

Amino Acids

119.35

Weight (kDa)

5.2

Isoelectric Point (pI)

52.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62310
fragaria_vesca	FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920 FvH4_7g27920
malus_domestica	MD00G1104600.v1.1 MD07G1256300.v1.1
prunus_persica	Prupe.2G255800_v2.0.a1 Prupe.2G280200_v2.0.a1 Prupe.2G280200_v2.0.a1
pyrus_communis	pycom01g19590 pycom07g22920
rosa_chinensis	RchiOBHm_Chr1g0374881
rosa_laevigata	RLG00000026710
rosa_multiflora	Rmu_sc0003145.1_g000005 Rmu_sc0004947.1_g000030
rosa_roxburghii	Rroxscaffold_4G00283210
rosa_rugosa	Rorug01G0385500
rosa_samantha	Rh1AG397100 Rh1BG360900 Rh1CG374600 Rh1DG391900
rosa_wichuraiana	Rw1G035210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3184
Acc36I	ACCTGC	2 cut(s)	1853, 2654
AccB1I	GGYRCC	3 cut(s)	304, 2762, 2779
AccB7I	CCANNNNNTGG	2 cut(s)	1091, 2675
AccBSI	CCGCTC	1 cut(s)	316
AccI	GTMKAC	1 cut(s)	2248
AclI	AACGTT	1 cut(s)	1297
AclWI	GGATC	4 cut(s)	5, 250, 854, 2289
AcoI	YGGCCR	1 cut(s)	162
AcsI	RAATTY	6 cut(s)	592, 784, 839, 1050, 1314, 1420
AcuI	CTGAAG	3 cut(s)	741, 1575, 3064
AcyI	GRCGYC	2 cut(s)	305, 886
AdeI	CACNNNGTG	1 cut(s)	1091
AfaI	GTAC	9 cut(s)	867, 1257, 1492, 2154, 2254, 2540, 2951, 3025, 3107
AfiI	CCNNNNNNNGG	5 cut(s)	1091, 1471, 1841, 2464, 2675
AflIII	ACRYGT	1 cut(s)	1803
AjnI	CCWGG	2 cut(s)	152, 2076
AjuI	GAANNNNNNNTTGG	2 cut(s)	2778, 2810
Alw21I	GWGCWC	6 cut(s)	420, 956, 1002, 1369, 1479, 3088
Alw26I	GTCTC	9 cut(s)	87, 189, 239, 768, 834, 1128, 1604, 2102, 3144
Alw44I	GTGCAC	3 cut(s)	416, 952, 1365
AlwI	GGATC	4 cut(s)	5, 250, 854, 2289
AoxI	GGCC	3 cut(s)	162, 906, 2601
ApaI	GGGCCC	1 cut(s)	910
ApaLI	GTGCAC	3 cut(s)	416, 952, 1365
ApeKI	GCWGC	7 cut(s)	266, 1235, 1399, 1625, 2583, 2646, 3018
ApoI	RAATTY	6 cut(s)	592, 784, 839, 1050, 1314, 1420
ArsI	GACNNNNNNTTYG	2 cut(s)	1754, 1786
Asp700I	GAANNNNTTC	1 cut(s)	2790
AspA2I	CCTAGG	1 cut(s)	512
AspLEI	GCGC	1 cut(s)	307
AspS9I	GGNCC	7 cut(s)	906, 907, 1082, 1845, 2485, 2602, 2666
AsuC2I	CCSGG	2 cut(s)	354, 811
AvaII	GGWCC	4 cut(s)	1082, 1845, 2485, 2666
AvrII	CCTAGG	1 cut(s)	512
BaeGI	GKGCMC	4 cut(s)	420, 910, 956, 1369
BanI	GGYRCC	3 cut(s)	304, 2762, 2779
BanII	GRGCYC	4 cut(s)	152, 282, 910, 2625
BarI	GAAGNNNNNNTAC	2 cut(s)	849, 881
BauI	CACGAG	1 cut(s)	1125
BbsI	GAAGAC	8 cut(s)	747, 923, 1004, 2064, 2125, 2265, 3054, 3182
Bbv12I	GWGCWC	6 cut(s)	420, 956, 1002, 1369, 1479, 3088
BbvI	GCAGC	7 cut(s)	253, 1222, 1411, 1612, 2570, 2658, 3030
BceAI	ACGGC	2 cut(s)	292, 974
BciT130I	CCWGG	2 cut(s)	154, 2078
BciVI	GTATCC	4 cut(s)	1315, 1647, 1658, 1694
BcnI	CCSGG	2 cut(s)	354, 811
BcoDI	GTCTC	9 cut(s)	87, 189, 239, 768, 834, 1128, 1604, 2102, 3144
BfaI	CTAG	9 cut(s)	275, 423, 513, 800, 1143, 1899, 2054, 2579, 3041
BfmI	CTRYAG	1 cut(s)	1201
BfoI	RGCGCY	1 cut(s)	308
BfuAI	ACCTGC	2 cut(s)	1853, 2654
BfuI	GTATCC	4 cut(s)	1315, 1647, 1658, 1694
BglII	AGATCT	2 cut(s)	1783, 2554
BlnI	CCTAGG	1 cut(s)	512
BmcAI	AGTACT	3 cut(s)	2540, 3025, 3107
Bme1390I	CCNGG	4 cut(s)	154, 354, 811, 2078
Bme18I	GGWCC	4 cut(s)	1082, 1845, 2485, 2666
BmgT120I	GGNCC	7 cut(s)	906, 907, 1082, 1845, 2485, 2602, 2666
BmiI	GGNNCC	7 cut(s)	149, 306, 907, 908, 1846, 2764, 2781
BmrFI	CCNGG	4 cut(s)	154, 354, 811, 2078
BmsI	GCATC	6 cut(s)	86, 1090, 1612, 1747, 2083, 2908
BoxI	GACNNNNGTC	1 cut(s)	885
BpiI	GAAGAC	8 cut(s)	747, 923, 1004, 2064, 2125, 2265, 3054, 3182
BplI	GAGNNNNNCTC	6 cut(s)	99, 131, 565, 597, 1463, 1495
BpmI	CTGGAG	2 cut(s)	88, 3072
BpuEI	CTTGAG	2 cut(s)	1716, 1973
BpuMI	CCSGG	2 cut(s)	354, 811
BsaAI	YACGTR	2 cut(s)	1468, 2252
BsaBI	GATNNNNATC	1 cut(s)	15
BsaHI	GRCGYC	2 cut(s)	305, 886
BsaI	GGTCTC	1 cut(s)	239
BsaJI	CCNNGG	5 cut(s)	152, 165, 512, 1030, 3180
BsaWI	WCCGGW	2 cut(s)	318, 616
Bsc4I	CCNNNNNNNGG	5 cut(s)	1091, 1471, 1841, 2464, 2675
Bse118I	RCCGGY	4 cut(s)	53, 335, 882, 2946
Bse1I	ACTGG	6 cut(s)	404, 1198, 1986, 2374, 2689, 3031
Bse8I	GATNNNNATC	1 cut(s)	15
BseBI	CCWGG	2 cut(s)	154, 2078
BseDI	CCNNGG	5 cut(s)	152, 165, 512, 1030, 3180
BseGI	GGATG	9 cut(s)	91, 700, 883, 1212, 1331, 2098, 2454, 2887, 3061
BseJI	GATNNNNATC	1 cut(s)	15
BseLI	CCNNNNNNNGG	5 cut(s)	1091, 1471, 1841, 2464, 2675
BseMII	CTCAG	7 cut(s)	431, 1036, 1079, 1230, 1362, 2741, 3155
BseNI	ACTGG	6 cut(s)	404, 1198, 1986, 2374, 2689, 3031
BseRI	GAGGAG	1 cut(s)	1487
BseSI	GKGCMC	4 cut(s)	420, 910, 956, 1369
BseXI	GCAGC	7 cut(s)	253, 1222, 1411, 1612, 2570, 2658, 3030
BsgI	GTGCAG	3 cut(s)	986, 1083, 3122
Bsh1285I	CGRYCG	1 cut(s)	302
BshFI	GGCC	3 cut(s)	164, 908, 2603
BshNI	GGYRCC	3 cut(s)	304, 2762, 2779
BsiEI	CGRYCG	1 cut(s)	302
BsiHKAI	GWGCWC	6 cut(s)	420, 956, 1002, 1369, 1479, 3088
BsiSI	CCGG	9 cut(s)	54, 145, 319, 336, 354, 617, 811, 883, 2947
BslFI	GGGAC	3 cut(s)	613, 1858, 2817
BslI	CCNNNNNNNGG	5 cut(s)	1091, 1471, 1841, 2464, 2675
BsmAI	GTCTC	9 cut(s)	87, 189, 239, 768, 834, 1128, 1604, 2102, 3144
BsmBI	CGTCTC	3 cut(s)	87, 189, 2102
BsmFI	GGGAC	3 cut(s)	613, 1858, 2817
BsmI	GAATGC	3 cut(s)	635, 2428, 2865
BsnI	GGCC	3 cut(s)	164, 908, 2603
Bso31I	GGTCTC	1 cut(s)	239
Bsp120I	GGGCCC	1 cut(s)	906
Bsp1407I	TGTACA	3 cut(s)	865, 1490, 2152
BspANI	GGCC	3 cut(s)	164, 908, 2603
BspCNI	CTCAG	7 cut(s)	432, 1035, 1080, 1231, 1361, 2740, 3154
BspHI	TCATGA	3 cut(s)	583, 1339, 2940
BspLI	GGNNCC	7 cut(s)	149, 306, 907, 908, 1846, 2764, 2781
BspMI	ACCTGC	2 cut(s)	1853, 2654
BspPI	GGATC	4 cut(s)	5, 250, 854, 2289
BspQI	GCTCTTC	1 cut(s)	990
BspT107I	GGYRCC	3 cut(s)	304, 2762, 2779
BspTNI	GGTCTC	1 cut(s)	239
BsrBI	CCGCTC	1 cut(s)	316
BsrFI	RCCGGY	4 cut(s)	53, 335, 882, 2946
BsrGI	TGTACA	3 cut(s)	865, 1490, 2152
BsrI	ACTGG	6 cut(s)	404, 1198, 1986, 2374, 2689, 3031
BssAI	RCCGGY	4 cut(s)	53, 335, 882, 2946
BssECI	CCNNGG	5 cut(s)	152, 165, 512, 1030, 3180
BssNI	GRCGYC	2 cut(s)	305, 886
BssSI	CACGAG	1 cut(s)	1125
BssT1I	CCWWGG	3 cut(s)	512, 1030, 3180
Bst2BI	CACGAG	1 cut(s)	1125
Bst2UI	CCWGG	2 cut(s)	154, 2078
Bst4CI	ACNGT	7 cut(s)	385, 1061, 1462, 1528, 2027, 2239, 2847
Bst6I	CTCTTC	4 cut(s)	183, 331, 548, 990
BstACI	GRCGYC	2 cut(s)	305, 886
BstAPI	GCANNNNNTGC	1 cut(s)	1823
BstAUI	TGTACA	3 cut(s)	865, 1490, 2152
BstBAI	YACGTR	2 cut(s)	1468, 2252
BstC8I	GCNNGC	5 cut(s)	55, 337, 341, 1305, 3147
BstENI	CCTNNNNNAGG	1 cut(s)	1839
BstF5I	GGATG	9 cut(s)	91, 700, 883, 1212, 1331, 2098, 2454, 2887, 3061
BstH2I	RGCGCY	1 cut(s)	308
BstHHI	GCGC	1 cut(s)	307
BstMAI	GTCTC	9 cut(s)	87, 189, 239, 768, 834, 1128, 1604, 2102, 3144
BstMCI	CGRYCG	1 cut(s)	302
BstMWI	GCNNNNNNNGC	7 cut(s)	59, 68, 313, 892, 1148, 1157, 1823
BstNI	CCWGG	2 cut(s)	154, 2078
BstNSI	RCATGY	6 cut(s)	1307, 1741, 1807, 2511, 2978, 3018
BstPAI	GACNNNNGTC	1 cut(s)	885
BstSCI	CCNGG	4 cut(s)	152, 352, 809, 2076
BstSFI	CTRYAG	1 cut(s)	1201
BstSLI	GKGCMC	4 cut(s)	420, 910, 956, 1369
BstSNI	TACGTA	1 cut(s)	2252
BstV1I	GCAGC	7 cut(s)	253, 1222, 1411, 1612, 2570, 2658, 3030
BstV2I	GAAGAC	8 cut(s)	747, 923, 1004, 2064, 2125, 2265, 3054, 3182
BstX2I	RGATCY	2 cut(s)	1783, 2554
BstXI	CCANNNNNNTGG	1 cut(s)	160
BstYI	RGATCY	2 cut(s)	1783, 2554
BsuI	GTATCC	4 cut(s)	1315, 1647, 1658, 1694
BsuRI	GGCC	3 cut(s)	164, 908, 2603
BtgZI	GCGATG	1 cut(s)	435
BtsCI	GGATG	9 cut(s)	91, 700, 883, 1212, 1331, 2098, 2454, 2887, 3061
BtsI	GCAGTG	3 cut(s)	821, 1170, 2995
BveI	ACCTGC	2 cut(s)	1853, 2654
Cac8I	GCNNGC	5 cut(s)	55, 337, 341, 1305, 3147
CciI	TCATGA	3 cut(s)	583, 1339, 2940
CfoI	GCGC	1 cut(s)	307
Cfr10I	RCCGGY	4 cut(s)	53, 335, 882, 2946
Cfr13I	GGNCC	7 cut(s)	906, 907, 1082, 1845, 2485, 2602, 2666
CseI	GACGC	4 cut(s)	258, 875, 1823, 2729
Csp6I	GTAC	9 cut(s)	866, 1256, 1491, 2153, 2253, 2539, 2950, 3024, 3106
CspCI	CAANNNNNGTGG	4 cut(s)	964, 999, 1894, 1929
CviQI	GTAC	9 cut(s)	866, 1256, 1491, 2153, 2253, 2539, 2950, 3024, 3106
DinI	GGCGCC	1 cut(s)	306
DraIII	CACNNNGTG	1 cut(s)	1091
DrdI	GACNNNNNNGTC	1 cut(s)	3184
DseDI	GACNNNNNNGTC	1 cut(s)	3184
EaeI	YGGCCR	1 cut(s)	162
Eam1104I	CTCTTC	4 cut(s)	183, 331, 548, 990
EarI	CTCTTC	4 cut(s)	183, 331, 548, 990
EciI	GGCGGA	3 cut(s)	37, 322, 3089
Eco105I	TACGTA	1 cut(s)	2252
Eco130I	CCWWGG	3 cut(s)	512, 1030, 3180
Eco24I	GRGCYC	4 cut(s)	152, 282, 910, 2625
Eco31I	GGTCTC	1 cut(s)	239
Eco47I	GGWCC	4 cut(s)	1082, 1845, 2485, 2666
Eco57I	CTGAAG	3 cut(s)	741, 1575, 3064
EcoNI	CCTNNNNNAGG	1 cut(s)	1839
EcoO109I	RGGNCCY	2 cut(s)	906, 907
EcoRII	CCWGG	2 cut(s)	152, 2076
EcoT14I	CCWWGG	3 cut(s)	512, 1030, 3180
EcoT38I	GRGCYC	4 cut(s)	152, 282, 910, 2625
EgeI	GGCGCC	1 cut(s)	306
EheI	GGCGCC	1 cut(s)	306
ErhI	CCWWGG	3 cut(s)	512, 1030, 3180
Esp3I	CGTCTC	3 cut(s)	87, 189, 2102
FalI	AAGNNNNNCTT	8 cut(s)	474, 506, 1363, 1395, 1725, 1757, 2704, 2736
FaqI	GGGAC	3 cut(s)	613, 1858, 2817
FauI	CCCGC	2 cut(s)	76, 718
FauNDI	CATATG	3 cut(s)	645, 1414, 2954
FblI	GTMKAC	1 cut(s)	2248
FokI	GGATG	9 cut(s)	78, 707, 890, 1219, 1318, 2105, 2441, 2874, 3068
FriOI	GRGCYC	4 cut(s)	152, 282, 910, 2625
FspBI	CTAG	9 cut(s)	275, 423, 513, 800, 1143, 1899, 2054, 2579, 3041
GlaI	GCGC	1 cut(s)	306
GsuI	CTGGAG	2 cut(s)	88, 3072
HaeII	RGCGCY	1 cut(s)	308
HaeIII	GGCC	3 cut(s)	164, 908, 2603
HapII	CCGG	9 cut(s)	54, 145, 319, 336, 354, 617, 811, 883, 2947
HgaI	GACGC	4 cut(s)	258, 875, 1823, 2729
HhaI	GCGC	1 cut(s)	307
Hin1I	GRCGYC	2 cut(s)	305, 886
Hin6I	GCGC	1 cut(s)	305
HinP1I	GCGC	1 cut(s)	305
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HpaII	CCGG	9 cut(s)	54, 145, 319, 336, 354, 617, 811, 883, 2947
Hpy166II	GTNNAC	9 cut(s)	172, 418, 545, 954, 1085, 1359, 1367, 1465, 2249
Hpy188I	TCNGA	8 cut(s)	36, 87, 760, 1294, 1351, 1584, 2489, 2730
Hpy8I	GTNNAC	9 cut(s)	172, 418, 545, 954, 1085, 1359, 1367, 1465, 2249
Hpy99I	CGWCG	6 cut(s)	188, 218, 221, 224, 274, 313
HpyCH4III	ACNGT	7 cut(s)	385, 1061, 1462, 1528, 2027, 2239, 2847
HpyCH4IV	ACGT	6 cut(s)	1297, 1467, 1819, 2111, 2122, 2251
HpyF10VI	GCNNNNNNNGC	7 cut(s)	59, 68, 313, 892, 1148, 1157, 1823
HpySE526I	ACGT	6 cut(s)	1297, 1467, 1819, 2111, 2122, 2251
Hsp92I	GRCGYC	2 cut(s)	305, 886
HspAI	GCGC	1 cut(s)	305
KasI	GGCGCC	1 cut(s)	304
KroI	GCCGGC	2 cut(s)	53, 335
KroNI	GCCGGC	2 cut(s)	55, 337
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	8 cut(s)	120, 147, 321, 1148, 1396, 1474, 1874, 3091
Lsp1109I	GCAGC	7 cut(s)	253, 1222, 1411, 1612, 2570, 2658, 3030
LweI	GCATC	6 cut(s)	86, 1090, 1612, 1747, 2083, 2908
MaeI	CTAG	9 cut(s)	275, 423, 513, 800, 1143, 1899, 2054, 2579, 3041
MaeII	ACGT	6 cut(s)	1297, 1467, 1819, 2111, 2122, 2251
MbiI	CCGCTC	1 cut(s)	316
MfeI	CAATTG	3 cut(s)	1389, 1494, 2014
MflI	RGATCY	2 cut(s)	1783, 2554
Mly113I	GGCGCC	1 cut(s)	305
MlyI	GAGTC	4 cut(s)	82, 289, 770, 3194
MmeI	TCCRAC	4 cut(s)	110, 450, 855, 2674
MreI	CGCCGGCG	1 cut(s)	335
MroNI	GCCGGC	2 cut(s)	53, 335
MroXI	GAANNNNTTC	1 cut(s)	2790
MseI	TTAA	8 cut(s)	1523, 1743, 1788, 1892, 2396, 2543, 2979, 3129
MslI	CAYNNNNRTG	2 cut(s)	2160, 2979
MspA1I	CMGCKG	1 cut(s)	3145
MspI	CCGG	9 cut(s)	54, 145, 319, 336, 354, 617, 811, 883, 2947
MspR9I	CCNGG	4 cut(s)	154, 354, 811, 2078
MunI	CAATTG	3 cut(s)	1389, 1494, 2014
Mva1269I	GAATGC	3 cut(s)	635, 2428, 2865
MvaI	CCWGG	2 cut(s)	154, 2078
MwoI	GCNNNNNNNGC	7 cut(s)	59, 68, 313, 892, 1148, 1157, 1823
NaeI	GCCGGC	2 cut(s)	55, 337
NarI	GGCGCC	1 cut(s)	305
NciI	CCSGG	2 cut(s)	354, 811
NdeI	CATATG	3 cut(s)	645, 1414, 2954
NgoMIV	GCCGGC	2 cut(s)	53, 335
NlaIV	GGNNCC	7 cut(s)	149, 306, 907, 908, 1846, 2764, 2781
NmeAIII	GCCGAG	1 cut(s)	190
NmuCI	GTSAC	8 cut(s)	652, 1025, 1508, 1811, 2372, 2733, 2990, 3186
NspI	RCATGY	6 cut(s)	1307, 1741, 1807, 2511, 2978, 3018
PaeI	GCATGC	1 cut(s)	1307
PagI	TCATGA	3 cut(s)	583, 1339, 2940
PciI	ACATGT	1 cut(s)	1803
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	3 cut(s)	180, 219, 2248
PctI	GAATGC	3 cut(s)	635, 2428, 2865
PdiI	GCCGGC	2 cut(s)	55, 337
PdmI	GAANNNNTTC	1 cut(s)	2790
PfeI	GAWTC	7 cut(s)	124, 1187, 1262, 1577, 2189, 2413, 2959
PflMI	CCANNNNNTGG	2 cut(s)	1091, 2675
PfoI	TCCNGGA	1 cut(s)	2076
Ple19I	CGATCG	1 cut(s)	302
PleI	GAGTC	4 cut(s)	82, 289, 769, 3193
PluTI	GGCGCC	1 cut(s)	308
PpsI	GAGTC	4 cut(s)	82, 289, 769, 3193
Ppu21I	YACGTR	2 cut(s)	1468, 2252
PscI	ACATGT	1 cut(s)	1803
PshAI	GACNNNNGTC	1 cut(s)	885
Psp1406I	AACGTT	1 cut(s)	1297
Psp6I	CCWGG	2 cut(s)	152, 2076
PspGI	CCWGG	2 cut(s)	152, 2076
PspN4I	GGNNCC	7 cut(s)	149, 306, 907, 908, 1846, 2764, 2781
PspOMI	GGGCCC	1 cut(s)	906
PspPI	GGNCC	7 cut(s)	906, 907, 1082, 1845, 2485, 2602, 2666
PsuI	RGATCY	2 cut(s)	1783, 2554
PvuI	CGATCG	1 cut(s)	302
PvuII	CAGCTG	1 cut(s)	3145
RsaI	GTAC	9 cut(s)	867, 1257, 1492, 2154, 2254, 2540, 2951, 3025, 3107
RsaNI	GTAC	9 cut(s)	866, 1256, 1491, 2153, 2253, 2539, 2950, 3024, 3106
RseI	CAYNNNNRTG	2 cut(s)	2160, 2979
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	8 cut(s)	1523, 1743, 1788, 1892, 2396, 2543, 2979, 3129
Sau96I	GGNCC	7 cut(s)	906, 907, 1082, 1845, 2485, 2602, 2666
ScaI	AGTACT	3 cut(s)	2540, 3025, 3107
SchI	GAGTC	4 cut(s)	82, 289, 770, 3194
ScrFI	CCNGG	4 cut(s)	154, 354, 811, 2078
SfaNI	GCATC	6 cut(s)	86, 1090, 1612, 1747, 2083, 2908
SfcI	CTRYAG	1 cut(s)	1201
SfoI	GGCGCC	1 cut(s)	306
SgrAI	CRCCGGYG	1 cut(s)	335
SinI	GGWCC	4 cut(s)	1082, 1845, 2485, 2666
SmiMI	CAYNNNNRTG	2 cut(s)	2160, 2979
SmlI	CTYRAG	2 cut(s)	1731, 1952
SmoI	CTYRAG	2 cut(s)	1731, 1952
SnaBI	TACGTA	1 cut(s)	2252
SphI	GCATGC	1 cut(s)	1307
SspDI	GGCGCC	1 cut(s)	304
SspI	AATATT	1 cut(s)	1792
SspMI	CTAG	9 cut(s)	275, 423, 513, 800, 1143, 1899, 2054, 2579, 3041
StyD4I	CCNGG	4 cut(s)	152, 352, 809, 2076
StyI	CCWWGG	3 cut(s)	512, 1030, 3180
TaaI	ACNGT	7 cut(s)	385, 1061, 1462, 1528, 2027, 2239, 2847
TaiI	ACGT	6 cut(s)	1300, 1470, 1822, 2114, 2125, 2254
TaqI	TCGA	7 cut(s)	5, 41, 298, 1280, 1483, 2284, 2627
TaqII	GACCGA	1 cut(s)	2064
TatI	WGTACW	6 cut(s)	865, 1490, 2152, 2538, 3023, 3105
TauI	GCSGC	4 cut(s)	53, 74, 77, 316
TfiI	GAWTC	7 cut(s)	124, 1187, 1262, 1577, 2189, 2413, 2959
Tru1I	TTAA	8 cut(s)	1523, 1743, 1788, 1892, 2396, 2543, 2979, 3129
Tru9I	TTAA	8 cut(s)	1523, 1743, 1788, 1892, 2396, 2543, 2979, 3129
TseFI	GTSAC	8 cut(s)	652, 1025, 1508, 1811, 2372, 2733, 2990, 3186
TseI	GCWGC	7 cut(s)	266, 1235, 1399, 1625, 2583, 2646, 3018
Tsp45I	GTSAC	8 cut(s)	652, 1025, 1508, 1811, 2372, 2733, 2990, 3186
TspGWI	ACGGA	3 cut(s)	107, 307, 2259
Van91I	CCANNNNNTGG	2 cut(s)	1091, 2675
VneI	GTGCAC	3 cut(s)	416, 952, 1365
VpaK11BI	GGWCC	4 cut(s)	1082, 1845, 2485, 2666
XagI	CCTNNNNNAGG	1 cut(s)	1839
XapI	RAATTY	6 cut(s)	592, 784, 839, 1050, 1314, 1420
XbaI	TCTAGA	1 cut(s)	3040
XceI	RCATGY	6 cut(s)	1307, 1741, 1807, 2511, 2978, 3018
XcmI	CCANNNNNNNNNTGG	3 cut(s)	618, 980, 1315
XmaJI	CCTAGG	1 cut(s)	512
XmiI	GTMKAC	1 cut(s)	2248
XmnI	GAANNNNTTC	1 cut(s)	2790
XspI	CTAG	9 cut(s)	275, 423, 513, 800, 1143, 1899, 2054, 2579, 3041
ZrmI	AGTACT	3 cut(s)	2540, 3025, 3107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.