Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0009148

Physical Location & Seq

Genomic Coordinates Reverse (-)

20609880 .. 20613477

Gene Structure 3598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g23230.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGACAGGTCTAGATCTAAGCGGTACTACTATGAACAGGACTACGATACGGAGACTGTGGGTAGGACGAGGCCTCGGTACAACCACCACTATGCGAACAACAACAACCACCGCCACCGCGGAAGTGGCGGCGGCGGCGGCGGTGGTGGTGGAAGACCCAATAAGCCGCCTCAGCAGGACCCGTCGGTTACGGTAACTACGACGTACCGTATTCTCTGTCACGATATGAAGGCTGGAGGGGTGATTGGGAAGTCCGGTAGCATCATTAAGTCGATCCCGCAGCACACCGGCGCATGGATCAACGTGCATGAACTGATTCCCGGAGACGAGGAGCGGATTATTGAGATTTCCGATACGCGGCGGCGGGACCCGGAGGGGCGAATGCCGTCGTTCTCGCCGGCCCAGGAGGCGCTATTTTTGGTCCATGAGAGGATTCTGGAGAGTGATGGTGCAGGGTTTGGCGGTGAGGAGGAGGATGAGTATGGTGGCGGGGTTAGAGGAGGTGGCGGCGGCGGTGGTGGGAATCGAGTGGCGACGCGGCTGGTCGTGTCGAGAATGCATGTGGGGTGTTTGCTTGGGAAGGGTGGGAAGATAATTGAGCAAATGAGGATGGAGACAAAGACCCAGATTAGGGTGTTGCCTAGGGATCAAAATCTGCCCCGCTGTGTTTCGATGTCGGAGGAGATTGTTCAGGTAGTAGGGGATCCGAATAATGTGAAGAATGCTGTGGCAATTATTTCATCACGCTTGAGGGAGAGTCAGCATCGGGATCGCAGTCATTTCCAGGGGCGAGTGCATTCACCTGAACGGTTCTTTCCTCCTGATGATGATTATATTCCTCATATGAACAATGCAGGACGGAAGGCACCCATGGATGGGGCTCCCTTTGTACCGCGATTATCTAACCCCAATATCAGAAACAACAACTTTGCCCCCCGTTCATCTGGTTATCCAATTGAACCTGGGTCTGCTCATATGACTGATAATGTGCAGCCCTTTGCTGAAGACCTTGTGTTTCGAATACTCTGTCCAGTTGACAAAGTTGATCTTATAGTTGGAGATTCTGCCGGAATTATGGAATTGCTTCAAAATGAAATTGGTGTAGATGTCAAGGCTACAAACCCTGTGGTTGGTGAAGATGAACAGATAATCATAATTTCTTCCGAGGAGGGTCCTGATGACGAGCTGTTTCCAGCTCAGGAAGCTTTGTTGCATATTCAAACTCGCATTGTCGATCTTAGTCCAGACAAAGAGAACATTATAACTACTAGGTTACTTGTCCCAACAAGTGATATTGGCTGGTTAGAGGGAAGAGATGGGTTGTTATTGGAAATGAGGCGACTTACTGGTGCAGATATACAAATTCTTCCCATAGATGATCTTCCCGCGTGTGTATCAGGGGACGATGTGCTTATACAGATTGTAGGGGAAATAAAAGCAGCTCGAGATGCCCTTGTTGAGGTGACGTCAAGAATACGGAGTTACTTGTATAGAGAGTTGTTTCGAAAGGATACGACACCACCGGCTTTTGCACCAGGCCCTGTGGGCAGTGCTTTCGCAACGGAGCCATCTTTGAATAACACATTTCCAATTCGTGAAGCTCATACTGGAAATGATCCTCCTATGAAAATGTATCAGAATGTGCAAACCGGGGGAATAGCACAGCCATCAAAGGTTACTGGAAGGATTGCCAGTGAAACTGTGAAGCTAAACGAAGGTGAACGGCGTGAAGATGTTCTGAGTTCTTTGAATAGAATGCCTGTGACACTTGTCACTAGGAGTATACTTGAAGTTGTGATACCAGAGCAGGCAGTTTCAAAGCTCATAACGAAATCGAGAAACAAGCTTGCTCAGATCAGCGAGTTATCGGGAGCCAGTGTGACCCTGGTAGAGGATAGACCGGAGGAAACACAAAAGATCATTCGAATTTCAGGAACTCCAGAGCAGGCTGAGAGAGCTCAGAGCTTGCTTCAGGGCTTTATTTTAAGCACACAAGAAGACGGCCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010286 GO:0010445 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0016604 GO:0019222 GO:0023052 GO:0031047 GO:0031050 GO:0031053 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032870 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043900 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070878 GO:0070887 GO:0070918 GO:0071229 GO:0071310 GO:0071359 GO:0071395 GO:0071407 GO:0071495 GO:0071704 GO:0080134 GO:0090304 GO:0097159 GO:1900150 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

670

Amino Acids

73.49

Weight (kDa)

5.64

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53060 AT5G53060 AT5G53060
fragaria_vesca	FvH4_7g32010 FvH4_7g32010
malus_domestica	MD01G1222900.v1.1 MD07G1293700.v1.1
prunus_persica	Prupe.2G313500_v2.0.a1
pyrus_communis	pycom01g23230 pycom07g26650
rosa_chinensis	RchiOBHm_Chr1g0381621
rosa_laevigata	RLG00000026220
rosa_multiflora	Rmu_sc0003688.1_g000012 Rmu_sc0005891.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278580
rosa_rugosa	Rorug01G0429700
rosa_samantha	Rh1AG453000 Rh1BG410000 Rh1CG424600 Rh1DG441800 Rh2CG399100
rosa_wichuraiana	Rw1G039520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1262
AatII	GACGTC	1 cut(s)	1469
AccB1I	GGYRCC	1 cut(s)	865
AccBSI	CCGCTC	1 cut(s)	334
AccI	GTMKAC	1 cut(s)	1783
AccII	CGCG	5 cut(s)	120, 358, 538, 895, 1388
AclWI	GGATC	7 cut(s)	268, 305, 654, 698, 711, 777, 1610
AcsI	RAATTY	2 cut(s)	1362, 1926
AcuI	CTGAAG	2 cut(s)	1023, 1955
AcyI	GRCGYC	1 cut(s)	1466
AfaI	GTAC	4 cut(s)	26, 80, 206, 891
AfiI	CCNNNNNNNGG	9 cut(s)	294, 357, 630, 631, 875, 876, 1130, 1459, 1891
AgsI	TTSAA	7 cut(s)	959, 1088, 1220, 1576, 1750, 1790, 1818
AjnI	CCWGG	5 cut(s)	402, 783, 961, 1534, 1884
Alw21I	GWGCWC	1 cut(s)	1960
Alw26I	GTCTC	3 cut(s)	47, 318, 608
AlwI	GGATC	7 cut(s)	268, 305, 654, 698, 711, 777, 1610
AlwNI	CAGNNNCTG	1 cut(s)	1541
Ama87I	CYCGRG	1 cut(s)	1443
AoxI	GGCC	4 cut(s)	71, 399, 1537, 2002
ApeKI	GCWGC	3 cut(s)	280, 991, 1439
ApoI	RAATTY	2 cut(s)	1362, 1926
ArsI	GACNNNNNNTTYG	2 cut(s)	1012, 1044
Asp700I	GAANNNNTTC	3 cut(s)	315, 1083, 1734
AspA2I	CCTAGG	1 cut(s)	641
AspLEI	GCGC	2 cut(s)	293, 412
AspS9I	GGNCC	7 cut(s)	178, 367, 400, 421, 1172, 1538, 2003
AsuC2I	CCSGG	3 cut(s)	321, 371, 1651
AsuHPI	GGTGA	6 cut(s)	253, 476, 792, 1145, 1474, 1730
AsuII	TTCGAA	3 cut(s)	1018, 1504, 1924
AvaI	CYCGRG	1 cut(s)	1443
AvaII	GGWCC	4 cut(s)	178, 367, 421, 1172
AvrII	CCTAGG	1 cut(s)	641
BamHI	GGATCC	1 cut(s)	703
BanI	GGYRCC	1 cut(s)	865
BanII	GRGCYC	2 cut(s)	883, 1960
BarI	GAAGNNNNNNTAC	2 cut(s)	1782, 1814
BbsI	GAAGAC	3 cut(s)	160, 1011, 2004
Bbv12I	GWGCWC	1 cut(s)	1960
BbvCI	CCTCAGC	1 cut(s)	171
BbvI	GCAGC	3 cut(s)	292, 1003, 1451
BccI	CCATC	6 cut(s)	440, 604, 869, 1310, 1576, 1675
BceAI	ACGGC	2 cut(s)	370, 1739
BcgI	CGANNNNNNTGC	4 cut(s)	752, 786, 1537, 1571
BciT130I	CCWGG	5 cut(s)	404, 785, 963, 1536, 1886
BciVI	GTATCC	1 cut(s)	1504
BcnI	CCSGG	3 cut(s)	321, 371, 1651
BcoDI	GTCTC	3 cut(s)	47, 318, 608
BfaI	CTAG	4 cut(s)	12, 642, 1269, 1776
BfoI	RGCGCY	1 cut(s)	413
BfuI	GTATCC	1 cut(s)	1504
BglI	GCCNNNNNGGC	2 cut(s)	407, 1545
BglII	AGATCT	1 cut(s)	14
BlnI	CCTAGG	1 cut(s)	641
Bme1390I	CCNGG	8 cut(s)	321, 371, 404, 785, 963, 1536, 1651, 1886
Bme18I	GGWCC	4 cut(s)	178, 367, 421, 1172
BmeT110I	CYCGRG	1 cut(s)	1443
BmgT120I	GGNCC	7 cut(s)	178, 367, 400, 421, 1172, 1538, 2003
BmiI	GGNNCC	9 cut(s)	180, 368, 369, 705, 867, 882, 1173, 1566, 1873
BmrFI	CCNGG	8 cut(s)	321, 371, 404, 785, 963, 1536, 1651, 1886
BmsI	GCATC	3 cut(s)	270, 772, 1438
BoxI	GACNNNNGTC	1 cut(s)	1769
BpiI	GAAGAC	3 cut(s)	160, 1011, 2004
BpmI	CTGGAG	3 cut(s)	255, 458, 1923
Bpu10I	CCTNAGC	2 cut(s)	171, 1197
Bpu14I	TTCGAA	3 cut(s)	1018, 1504, 1924
BpuEI	CTTGAG	1 cut(s)	769
BpuMI	CCSGG	3 cut(s)	321, 371, 1651
BsaBI	GATNNNNATC	1 cut(s)	651
BsaHI	GRCGYC	1 cut(s)	1466
BsaWI	WCCGGW	2 cut(s)	254, 1900
BsaXI	ACNNNNNCTCC	4 cut(s)	464, 494, 1863, 1893
Bsc4I	CCNNNNNNNGG	9 cut(s)	294, 357, 630, 631, 875, 876, 1130, 1459, 1891
Bse118I	RCCGGY	3 cut(s)	287, 397, 1522
Bse1I	ACTGG	6 cut(s)	1031, 1351, 1612, 1684, 1692, 1875
Bse8I	GATNNNNATC	1 cut(s)	651
BseBI	CCWGG	5 cut(s)	404, 785, 963, 1536, 1886
BseGI	GGATG	3 cut(s)	481, 615, 880
BseJI	GATNNNNATC	1 cut(s)	651
BseLI	CCNNNNNNNGG	9 cut(s)	294, 357, 630, 631, 875, 876, 1130, 1459, 1891
BseMII	CTCAG	6 cut(s)	185, 1211, 1730, 1865, 1941, 1973
BseNI	ACTGG	6 cut(s)	1031, 1351, 1612, 1684, 1692, 1875
BseRI	GAGGAG	6 cut(s)	344, 482, 485, 513, 695, 1181
BseXI	GCAGC	3 cut(s)	292, 1003, 1451
BsgI	GTGCAG	3 cut(s)	471, 1010, 1371
Bsh1236I	CGCG	5 cut(s)	120, 358, 538, 895, 1388
BshFI	GGCC	4 cut(s)	73, 401, 1539, 2004
BshNI	GGYRCC	1 cut(s)	865
BsiHKAI	GWGCWC	1 cut(s)	1960
BsiHKCI	CYCGRG	1 cut(s)	1443
BsiSI	CCGG	9 cut(s)	255, 288, 321, 371, 398, 1068, 1523, 1650, 1901
BslFI	GGGAC	3 cut(s)	380, 1265, 1415
BslI	CCNNNNNNNGG	9 cut(s)	294, 357, 630, 631, 875, 876, 1130, 1459, 1891
BsmAI	GTCTC	3 cut(s)	47, 318, 608
BsmBI	CGTCTC	1 cut(s)	318
BsmFI	GGGAC	3 cut(s)	380, 1265, 1415
BsmI	GAATGC	5 cut(s)	387, 561, 727, 796, 1761
BsnI	GGCC	4 cut(s)	73, 401, 1539, 2004
BsoBI	CYCGRG	1 cut(s)	1443
Bsp119I	TTCGAA	3 cut(s)	1018, 1504, 1924
Bsp1286I	GDGCHC	2 cut(s)	883, 1960
Bsp19I	CCATGG	1 cut(s)	870
BspANI	GGCC	4 cut(s)	73, 401, 1539, 2004
BspCNI	CTCAG	6 cut(s)	184, 1210, 1731, 1864, 1942, 1972
BspFNI	CGCG	5 cut(s)	120, 358, 538, 895, 1388
BspLI	GGNNCC	9 cut(s)	180, 368, 369, 705, 867, 882, 1173, 1566, 1873
BspPI	GGATC	7 cut(s)	268, 305, 654, 698, 711, 777, 1610
BspT104I	TTCGAA	3 cut(s)	1018, 1504, 1924
BspT107I	GGYRCC	1 cut(s)	865
BsrBI	CCGCTC	1 cut(s)	334
BsrFI	RCCGGY	3 cut(s)	287, 397, 1522
BsrI	ACTGG	6 cut(s)	1031, 1351, 1612, 1684, 1692, 1875
BssAI	RCCGGY	3 cut(s)	287, 397, 1522
BssNAI	GTATAC	1 cut(s)	1784
BssNI	GRCGYC	1 cut(s)	1466
BssT1I	CCWWGG	2 cut(s)	641, 870
Bst1107I	GTATAC	1 cut(s)	1784
Bst2UI	CCWGG	5 cut(s)	404, 785, 963, 1536, 1886
Bst4CI	ACNGT	5 cut(s)	58, 193, 209, 810, 1702
Bst6I	CTCTTC	1 cut(s)	1306
BstACI	GRCGYC	1 cut(s)	1466
BstBI	TTCGAA	3 cut(s)	1018, 1504, 1924
BstC8I	GCNNGC	5 cut(s)	399, 1809, 1848, 1947, 1967
BstDEI	CTNAG	9 cut(s)	18, 171, 1197, 1238, 1739, 1851, 1950, 1959, 2007
BstDSI	CCRYGG	2 cut(s)	118, 870
BstENI	CCTNNNNNAGG	2 cut(s)	1457, 1889
BstF5I	GGATG	3 cut(s)	481, 615, 880
BstFNI	CGCG	5 cut(s)	120, 358, 538, 895, 1388
BstH2I	RGCGCY	1 cut(s)	413
BstHHI	GCGC	2 cut(s)	293, 412
BstMAI	GTCTC	3 cut(s)	47, 318, 608
BstMWI	GCNNNNNNNGC	9 cut(s)	126, 135, 138, 172, 407, 1202, 1448, 1545, 1955
BstNI	CCWGG	5 cut(s)	404, 785, 963, 1536, 1886
BstNSI	RCATGY	1 cut(s)	563
BstPAI	GACNNNNGTC	1 cut(s)	1769
BstSCI	CCNGG	8 cut(s)	319, 369, 402, 783, 961, 1534, 1649, 1884
BstUI	CGCG	5 cut(s)	120, 358, 538, 895, 1388
BstV1I	GCAGC	3 cut(s)	292, 1003, 1451
BstV2I	GAAGAC	3 cut(s)	160, 1011, 2004
BstX2I	RGATCY	2 cut(s)	14, 703
BstYI	RGATCY	2 cut(s)	14, 703
BstZ17I	GTATAC	1 cut(s)	1784
BsuI	GTATCC	1 cut(s)	1504
BsuRI	GGCC	4 cut(s)	73, 401, 1539, 2004
BtgI	CCRYGG	2 cut(s)	118, 870
BtsCI	GGATG	3 cut(s)	481, 615, 880
BtsI	GCAGTG	1 cut(s)	1555
BtsIMutI	CAGTG	3 cut(s)	1555, 1699, 1882
Cac8I	GCNNGC	5 cut(s)	399, 1809, 1848, 1947, 1967
CaiI	CAGNNNCTG	1 cut(s)	1541
CfoI	GCGC	2 cut(s)	293, 412
Cfr10I	RCCGGY	3 cut(s)	287, 397, 1522
Cfr13I	GGNCC	7 cut(s)	178, 367, 400, 421, 1172, 1538, 2003
Cfr42I	CCGCGG	1 cut(s)	121
CseI	GACGC	1 cut(s)	544
Csp6I	GTAC	4 cut(s)	25, 79, 205, 890
CspCI	CAANNNNNGTGG	2 cut(s)	1107, 1142
CviAII	CATG	5 cut(s)	294, 308, 425, 560, 871
CviQI	GTAC	4 cut(s)	25, 79, 205, 890
DdeI	CTNAG	9 cut(s)	18, 171, 1197, 1238, 1739, 1851, 1950, 1959, 2007
Eam1104I	CTCTTC	1 cut(s)	1306
EarI	CTCTTC	1 cut(s)	1306
Ecl136II	GAGCTC	1 cut(s)	1958
Eco130I	CCWWGG	2 cut(s)	641, 870
Eco147I	AGGCCT	1 cut(s)	73
Eco24I	GRGCYC	2 cut(s)	883, 1960
Eco47I	GGWCC	4 cut(s)	178, 367, 421, 1172
Eco53kI	GAGCTC	1 cut(s)	1958
Eco57I	CTGAAG	2 cut(s)	1023, 1955
Eco88I	CYCGRG	1 cut(s)	1443
EcoICRI	GAGCTC	1 cut(s)	1958
EcoNI	CCTNNNNNAGG	2 cut(s)	1457, 1889
EcoO109I	RGGNCCY	4 cut(s)	178, 367, 1172, 1538
EcoRII	CCWGG	5 cut(s)	402, 783, 961, 1534, 1884
EcoT14I	CCWWGG	2 cut(s)	641, 870
EcoT22I	ATGCAT	1 cut(s)	561
EcoT38I	GRGCYC	2 cut(s)	883, 1960
ErhI	CCWWGG	2 cut(s)	641, 870
Esp3I	CGTCTC	1 cut(s)	318
FaeI	CATG	5 cut(s)	297, 311, 428, 563, 874
FalI	AAGNNNNNCTT	2 cut(s)	1032, 1064
FaqI	GGGAC	3 cut(s)	380, 1265, 1415
FatI	CATG	5 cut(s)	293, 307, 424, 559, 870
FauI	CCCGC	5 cut(s)	285, 357, 482, 668, 1393
FauNDI	CATATG	2 cut(s)	843, 975
FblI	GTMKAC	1 cut(s)	1783
FokI	GGATG	3 cut(s)	488, 622, 887
FriOI	GRGCYC	2 cut(s)	883, 1960
FspBI	CTAG	4 cut(s)	12, 642, 1269, 1776
GlaI	GCGC	2 cut(s)	292, 411
GsuI	CTGGAG	3 cut(s)	255, 458, 1923
HaeII	RGCGCY	1 cut(s)	413
HaeIII	GGCC	4 cut(s)	73, 401, 1539, 2004
HapII	CCGG	9 cut(s)	255, 288, 321, 371, 398, 1068, 1523, 1650, 1901
HgaI	GACGC	1 cut(s)	544
HhaI	GCGC	2 cut(s)	293, 412
Hin1I	GRCGYC	1 cut(s)	1466
Hin1II	CATG	5 cut(s)	297, 311, 428, 563, 874
Hin6I	GCGC	2 cut(s)	291, 410
HinP1I	GCGC	2 cut(s)	291, 410
HincII	GTYRAC	1 cut(s)	1036
HindII	GTYRAC	1 cut(s)	1036
HindIII	AAGCTT	2 cut(s)	1203, 1844
HinfI	GANTC	5 cut(s)	316, 433, 523, 757, 1061
HpaII	CCGG	9 cut(s)	255, 288, 321, 371, 398, 1068, 1523, 1650, 1901
HphI	GGTGA	6 cut(s)	253, 476, 792, 1145, 1474, 1730
Hpy166II	GTNNAC	3 cut(s)	1036, 1721, 1784
Hpy188I	TCNGA	9 cut(s)	352, 679, 708, 917, 1165, 1638, 1740, 1854, 1962
Hpy8I	GTNNAC	3 cut(s)	1036, 1721, 1784
Hpy99I	CGWCG	4 cut(s)	187, 205, 391, 538
HpyAV	CCTTC	5 cut(s)	223, 574, 856, 1677, 1709
HpyCH4III	ACNGT	5 cut(s)	58, 193, 209, 810, 1702
HpyCH4IV	ACGT	3 cut(s)	203, 303, 1466
HpyF10VI	GCNNNNNNNGC	9 cut(s)	126, 135, 138, 172, 407, 1202, 1448, 1545, 1955
HpyF3I	CTNAG	9 cut(s)	18, 171, 1197, 1238, 1739, 1851, 1950, 1959, 2007
HpySE526I	ACGT	3 cut(s)	203, 303, 1466
Hsp92I	GRCGYC	1 cut(s)	1466
Hsp92II	CATG	5 cut(s)	297, 311, 428, 563, 874
HspAI	GCGC	2 cut(s)	291, 410
KflI	GGGWCCC	1 cut(s)	367
KroI	GCCGGC	1 cut(s)	397
KroNI	GCCGGC	1 cut(s)	399
KspI	CCGCGG	1 cut(s)	121
LmnI	GCTCC	4 cut(s)	331, 886, 1564, 1871
Lsp1109I	GCAGC	3 cut(s)	292, 1003, 1451
LweI	GCATC	3 cut(s)	270, 772, 1438
MaeI	CTAG	4 cut(s)	12, 642, 1269, 1776
MaeII	ACGT	3 cut(s)	203, 303, 1466
MbiI	CCGCTC	1 cut(s)	334
MfeI	CAATTG	1 cut(s)	954
MflI	RGATCY	2 cut(s)	14, 703
MhlI	GDGCHC	2 cut(s)	883, 1960
MlyI	GAGTC	1 cut(s)	766
MmeI	TCCRAC	2 cut(s)	657, 1036
Mph1103I	ATGCAT	1 cut(s)	561
MroNI	GCCGGC	1 cut(s)	397
MroXI	GAANNNNTTC	3 cut(s)	315, 1083, 1734
MseI	TTAA	2 cut(s)	267, 1985
MslI	CAYNNNNRTG	1 cut(s)	90
MspA1I	CMGCKG	2 cut(s)	120, 663
MspI	CCGG	9 cut(s)	255, 288, 321, 371, 398, 1068, 1523, 1650, 1901
MspR9I	CCNGG	8 cut(s)	321, 371, 404, 785, 963, 1536, 1651, 1886
MunI	CAATTG	1 cut(s)	954
Mva1269I	GAATGC	5 cut(s)	387, 561, 727, 796, 1761
MvaI	CCWGG	5 cut(s)	404, 785, 963, 1536, 1886
MvnI	CGCG	5 cut(s)	120, 358, 538, 895, 1388
MwoI	GCNNNNNNNGC	9 cut(s)	126, 135, 138, 172, 407, 1202, 1448, 1545, 1955
NaeI	GCCGGC	1 cut(s)	399
NciI	CCSGG	3 cut(s)	321, 371, 1651
NcoI	CCATGG	1 cut(s)	870
NdeI	CATATG	2 cut(s)	843, 975
NgoMIV	GCCGGC	1 cut(s)	397
NlaIII	CATG	5 cut(s)	297, 311, 428, 563, 874
NlaIV	GGNNCC	9 cut(s)	180, 368, 369, 705, 867, 882, 1173, 1566, 1873
NmuCI	GTSAC	5 cut(s)	218, 1462, 1762, 1771, 1879
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	1 cut(s)	563
NspV	TTCGAA	3 cut(s)	1018, 1504, 1924
PaeR7I	CTCGAG	1 cut(s)	1443
PceI	AGGCCT	1 cut(s)	73
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	5 cut(s)	387, 561, 727, 796, 1761
PdiI	GCCGGC	1 cut(s)	399
PdmI	GAANNNNTTC	3 cut(s)	315, 1083, 1734
PfeI	GAWTC	4 cut(s)	316, 433, 523, 1061
PfoI	TCCNGGA	1 cut(s)	319
PleI	GAGTC	1 cut(s)	765
PpsI	GAGTC	1 cut(s)	765
PpuMI	RGGWCCY	3 cut(s)	178, 367, 1172
PshAI	GACNNNNGTC	1 cut(s)	1769
PsiI	TTATAA	1 cut(s)	1262
Psp124BI	GAGCTC	1 cut(s)	1960
Psp5II	RGGWCCY	3 cut(s)	178, 367, 1172
Psp6I	CCWGG	5 cut(s)	402, 783, 961, 1534, 1884
PspGI	CCWGG	5 cut(s)	402, 783, 961, 1534, 1884
PspN4I	GGNNCC	9 cut(s)	180, 368, 369, 705, 867, 882, 1173, 1566, 1873
PspPI	GGNCC	7 cut(s)	178, 367, 400, 421, 1172, 1538, 2003
PspPPI	RGGWCCY	3 cut(s)	178, 367, 1172
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	2 cut(s)	14, 703
RsaI	GTAC	4 cut(s)	26, 80, 206, 891
RsaNI	GTAC	4 cut(s)	25, 79, 205, 890
RseI	CAYNNNNRTG	1 cut(s)	90
SacI	GAGCTC	1 cut(s)	1960
SacII	CCGCGG	1 cut(s)	121
SaqAI	TTAA	2 cut(s)	267, 1985
Sau96I	GGNCC	7 cut(s)	178, 367, 400, 421, 1172, 1538, 2003
SchI	GAGTC	1 cut(s)	766
ScrFI	CCNGG	8 cut(s)	321, 371, 404, 785, 963, 1536, 1651, 1886
SduI	GDGCHC	2 cut(s)	883, 1960
SfaNI	GCATC	3 cut(s)	270, 772, 1438
Sfr274I	CTCGAG	1 cut(s)	1443
Sfr303I	CCGCGG	1 cut(s)	121
SfuI	TTCGAA	3 cut(s)	1018, 1504, 1924
SgrAI	CRCCGGYG	1 cut(s)	287
SgrBI	CCGCGG	1 cut(s)	121
SinI	GGWCC	4 cut(s)	178, 367, 421, 1172
SlaI	CTCGAG	1 cut(s)	1443
SmiMI	CAYNNNNRTG	1 cut(s)	90
SmlI	CTYRAG	2 cut(s)	748, 1443
SmoI	CTYRAG	2 cut(s)	748, 1443
SseBI	AGGCCT	1 cut(s)	73
SspMI	CTAG	4 cut(s)	12, 642, 1269, 1776
SstI	GAGCTC	1 cut(s)	1960
StuI	AGGCCT	1 cut(s)	73
StyD4I	CCNGG	8 cut(s)	319, 369, 402, 783, 961, 1534, 1649, 1884
StyI	CCWWGG	2 cut(s)	641, 870
TaaI	ACNGT	5 cut(s)	58, 193, 209, 810, 1702
TaiI	ACGT	3 cut(s)	206, 306, 1469
TfiI	GAWTC	4 cut(s)	316, 433, 523, 1061
Tru1I	TTAA	2 cut(s)	267, 1985
Tru9I	TTAA	2 cut(s)	267, 1985
TscAI	CASTG	3 cut(s)	1555, 1699, 1882
TseFI	GTSAC	5 cut(s)	218, 1462, 1762, 1771, 1879
TseI	GCWGC	3 cut(s)	280, 991, 1439
Tsp45I	GTSAC	5 cut(s)	218, 1462, 1762, 1771, 1879
TspDTI	ATGAA	9 cut(s)	48, 242, 324, 729, 860, 930, 1107, 1155, 1640
TspGWI	ACGGA	4 cut(s)	65, 874, 1492, 1577
TspRI	CASTG	3 cut(s)	1555, 1699, 1882
VpaK11BI	GGWCC	4 cut(s)	178, 367, 421, 1172
XagI	CCTNNNNNAGG	2 cut(s)	1457, 1889
XapI	RAATTY	2 cut(s)	1362, 1926
XbaI	TCTAGA	1 cut(s)	11
XceI	RCATGY	1 cut(s)	563
XcmI	CCANNNNNNNNNTGG	2 cut(s)	122, 1882
XhoI	CTCGAG	1 cut(s)	1443
XmaJI	CCTAGG	1 cut(s)	641
XmiI	GTMKAC	1 cut(s)	1783
XmnI	GAANNNNTTC	3 cut(s)	315, 1083, 1734
XspI	CTAG	4 cut(s)	12, 642, 1269, 1776
ZraI	GACGTC	1 cut(s)	1467
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.