No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02080 |
| malus_domestica | MD02G1018600.v1.1 MD15G1162600.v1.1 |
| prunus_persica | Prupe.7G252200_v2.0.a1 Prupe.7G252200_v2.0.a1 |
| pyrus_communis | pycom02g01670 |
| rosa_chinensis | RchiOBHm_Chr2g0087101 |
| rosa_laevigata | RLG00000015832 |
| rosa_multiflora | Rmu_ssc0000239.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00153880 Rroxscaffold_7G00210780 |
| rosa_rugosa | Rorug01G0472500 Rorug01G0472500 |
| rosa_wichuraiana | Rw2G002050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 66, 117 |
| AciI | CCGC | 1 cut(s) | 113 |
| AcsI | RAATTY | 1 cut(s) | 288 |
| AgsI | TTSAA | 1 cut(s) | 194 |
| AluBI | AGCT | 1 cut(s) | 263 |
| AluI | AGCT | 1 cut(s) | 263 |
| Ama87I | CYCGRG | 1 cut(s) | 241 |
| ApeKI | GCWGC | 3 cut(s) | 80, 103, 260 |
| ApoI | RAATTY | 1 cut(s) | 288 |
| AspLEI | GCGC | 1 cut(s) | 14 |
| AvaI | CYCGRG | 1 cut(s) | 241 |
| BbvI | GCAGC | 3 cut(s) | 67, 90, 272 |
| BfmI | CTRYAG | 1 cut(s) | 258 |
| BglII | AGATCT | 1 cut(s) | 245 |
| BisI | GCNGC | 3 cut(s) | 81, 104, 261 |
| BlsI | GCNGC | 3 cut(s) | 82, 105, 262 |
| BmeT110I | CYCGRG | 1 cut(s) | 241 |
| BmsI | GCATC | 1 cut(s) | 39 |
| Bse3DI | GCAATG | 1 cut(s) | 63 |
| BseMI | GCAATG | 1 cut(s) | 63 |
| BseMII | CTCAG | 1 cut(s) | 9 |
| BseXI | GCAGC | 3 cut(s) | 67, 90, 272 |
| BsiHKCI | CYCGRG | 1 cut(s) | 241 |
| BsoBI | CYCGRG | 1 cut(s) | 241 |
| Bsp143I | GATC | 1 cut(s) | 245 |
| BspACI | CCGC | 1 cut(s) | 113 |
| BspCNI | CTCAG | 1 cut(s) | 10 |
| BspMAI | CTGCAG | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 63 |
| BssMI | GATC | 1 cut(s) | 245 |
| BssNAI | GTATAC | 1 cut(s) | 118 |
| Bst1107I | GTATAC | 1 cut(s) | 118 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| BstDEI | CTNAG | 1 cut(s) | 18 |
| BstHHI | GCGC | 1 cut(s) | 14 |
| BstKTI | GATC | 1 cut(s) | 248 |
| BstMBI | GATC | 1 cut(s) | 245 |
| BstSFI | CTRYAG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 3 cut(s) | 67, 90, 272 |
| BstX2I | RGATCY | 1 cut(s) | 245 |
| BstYI | RGATCY | 1 cut(s) | 245 |
| BstZ17I | GTATAC | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 1 cut(s) | 69 |
| CfoI | GCGC | 1 cut(s) | 14 |
| CviAII | CATG | 2 cut(s) | 186, 209 |
| CviJI | RGCY | 3 cut(s) | 42, 263, 312 |
| CviKI_1 | RGCY | 3 cut(s) | 42, 263, 312 |
| DdeI | CTNAG | 1 cut(s) | 18 |
| DpnI | GATC | 1 cut(s) | 247 |
| DpnII | GATC | 1 cut(s) | 245 |
| Eco88I | CYCGRG | 1 cut(s) | 241 |
| FaeI | CATG | 2 cut(s) | 189, 212 |
| FaiI | YATR | 5 cut(s) | 118, 164, 172, 187, 210 |
| FatI | CATG | 2 cut(s) | 185, 208 |
| FblI | GTMKAC | 2 cut(s) | 66, 117 |
| Fnu4HI | GCNGC | 3 cut(s) | 81, 104, 261 |
| Fsp4HI | GCNGC | 3 cut(s) | 81, 104, 261 |
| GlaI | GCGC | 1 cut(s) | 13 |
| GluI | GCNGC | 3 cut(s) | 81, 104, 261 |
| HhaI | GCGC | 1 cut(s) | 14 |
| Hin1II | CATG | 2 cut(s) | 189, 212 |
| Hin6I | GCGC | 1 cut(s) | 12 |
| HinP1I | GCGC | 1 cut(s) | 12 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 118 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 287 |
| Hpy188III | TCNNGA | 1 cut(s) | 243 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 118 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 1 cut(s) | 260 |
| HpyF3I | CTNAG | 1 cut(s) | 18 |
| Hsp92II | CATG | 2 cut(s) | 189, 212 |
| HspAI | GCGC | 1 cut(s) | 12 |
| Kzo9I | GATC | 1 cut(s) | 245 |
| LmnI | GCTCC | 1 cut(s) | 111 |
| LpnPI | CCDG | 2 cut(s) | 19, 108 |
| Lsp1109I | GCAGC | 3 cut(s) | 67, 90, 272 |
| LweI | GCATC | 1 cut(s) | 39 |
| MaeIII | GTNAC | 2 cut(s) | 181, 314 |
| MalI | GATC | 1 cut(s) | 247 |
| MboI | GATC | 1 cut(s) | 245 |
| MflI | RGATCY | 1 cut(s) | 245 |
| MluCI | AATT | 4 cut(s) | 145, 165, 177, 288 |
| MnlI | CCTC | 1 cut(s) | 25 |
| MseI | TTAA | 2 cut(s) | 143, 200 |
| NdeII | GATC | 1 cut(s) | 245 |
| NlaIII | CATG | 2 cut(s) | 189, 212 |
| NmuCI | GTSAC | 1 cut(s) | 181 |
| PaeR7I | CTCGAG | 1 cut(s) | 241 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 72 |
| PflFI | GACNNNGTC | 1 cut(s) | 71 |
| PkrI | GCNGC | 3 cut(s) | 82, 105, 262 |
| PstI | CTGCAG | 1 cut(s) | 262 |
| PsuI | RGATCY | 1 cut(s) | 245 |
| PsyI | GACNNNGTC | 1 cut(s) | 71 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SaqAI | TTAA | 2 cut(s) | 143, 200 |
| SatI | GCNGC | 3 cut(s) | 81, 104, 261 |
| Sau3AI | GATC | 1 cut(s) | 245 |
| SetI | ASST | 1 cut(s) | 265 |
| SfaNI | GCATC | 1 cut(s) | 39 |
| SfcI | CTRYAG | 1 cut(s) | 258 |
| Sfr274I | CTCGAG | 1 cut(s) | 241 |
| SgeI | CNNG | 7 cut(s) | 46, 107, 122, 198, 221, 253, 255 |
| SlaI | CTCGAG | 1 cut(s) | 241 |
| SmlI | CTYRAG | 1 cut(s) | 241 |
| SmoI | CTYRAG | 1 cut(s) | 241 |
| Sse9I | AATT | 4 cut(s) | 145, 165, 177, 288 |
| SsiI | CCGC | 1 cut(s) | 113 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TaqI | TCGA | 2 cut(s) | 66, 242 |
| TasI | AATT | 4 cut(s) | 145, 165, 177, 288 |
| Tru1I | TTAA | 2 cut(s) | 143, 200 |
| Tru9I | TTAA | 2 cut(s) | 143, 200 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseFI | GTSAC | 1 cut(s) | 181 |
| TseI | GCWGC | 3 cut(s) | 80, 103, 260 |
| Tsp45I | GTSAC | 1 cut(s) | 181 |
| TspDTI | ATGAA | 2 cut(s) | 151, 197 |
| TspRI | CASTG | 1 cut(s) | 76 |
| Tth111I | GACNNNGTC | 1 cut(s) | 71 |
| XapI | RAATTY | 1 cut(s) | 288 |
| XhoI | CTCGAG | 1 cut(s) | 241 |
| XmiI | GTMKAC | 2 cut(s) | 66, 117 |