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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02080 |
| malus_domestica | MD02G1018600.v1.1 MD15G1162600.v1.1 |
| prunus_persica | Prupe.7G252200_v2.0.a1 Prupe.7G252200_v2.0.a1 |
| pyrus_communis | pycom02g01670 |
| rosa_chinensis | RchiOBHm_Chr2g0087101 |
| rosa_laevigata | RLG00000015832 |
| rosa_multiflora | Rmu_ssc0000239.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00153880 Rroxscaffold_7G00210780 |
| rosa_rugosa | Rorug01G0472500 Rorug01G0472500 |
| rosa_wichuraiana | Rw2G002050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 671 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 188 |
| AciI | CCGC | 1 cut(s) | 122 |
| AclWI | GGATC | 3 cut(s) | 462, 535, 561 |
| AcsI | RAATTY | 2 cut(s) | 325, 636 |
| AcuI | CTGAAG | 5 cut(s) | 292, 336, 453, 552, 558 |
| AdeI | CACNNNGTG | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 188 |
| AflII | CTTAAG | 1 cut(s) | 173 |
| AgsI | TTSAA | 4 cut(s) | 338, 555, 743, 912 |
| AlwI | GGATC | 3 cut(s) | 462, 535, 561 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 530, 821 |
| AoxI | GGCC | 1 cut(s) | 654 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| ApoI | RAATTY | 2 cut(s) | 325, 636 |
| AsuHPI | GGTGA | 6 cut(s) | 213, 242, 407, 758, 875, 895 |
| BauI | CACGAG | 1 cut(s) | 225 |
| BbsI | GAAGAC | 1 cut(s) | 511 |
| BbvI | GCAGC | 1 cut(s) | 140 |
| BccI | CCATC | 1 cut(s) | 249 |
| BceAI | ACGGC | 1 cut(s) | 29 |
| BfaI | CTAG | 3 cut(s) | 284, 543, 878 |
| BfmI | CTRYAG | 4 cut(s) | 349, 438, 444, 731 |
| BfrI | CTTAAG | 1 cut(s) | 173 |
| BglII | AGATCT | 1 cut(s) | 94 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| BmiI | GGNNCC | 1 cut(s) | 180 |
| BmsI | GCATC | 1 cut(s) | 354 |
| BpiI | GAAGAC | 1 cut(s) | 511 |
| BpmI | CTGGAG | 1 cut(s) | 45 |
| Bpu10I | CCTNAGC | 1 cut(s) | 495 |
| BpuEI | CTTGAG | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 3 cut(s) | 289, 651, 687 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 384, 414 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 188 |
| Bse118I | RCCGGY | 1 cut(s) | 124 |
| BseDI | CCNNGG | 3 cut(s) | 289, 651, 687 |
| BseGI | GGATG | 2 cut(s) | 260, 364 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BseXI | GCAGC | 1 cut(s) | 140 |
| BsgI | GTGCAG | 1 cut(s) | 922 |
| BshFI | GGCC | 1 cut(s) | 656 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 188 |
| BsnI | GGCC | 1 cut(s) | 656 |
| Bsp143I | GATC | 4 cut(s) | 94, 467, 527, 566 |
| BspACI | CCGC | 1 cut(s) | 122 |
| BspANI | GGCC | 1 cut(s) | 656 |
| BspLI | GGNNCC | 1 cut(s) | 180 |
| BspPI | GGATC | 3 cut(s) | 462, 535, 561 |
| BspTI | CTTAAG | 1 cut(s) | 173 |
| BsrFI | RCCGGY | 1 cut(s) | 124 |
| BssAI | RCCGGY | 1 cut(s) | 124 |
| BssECI | CCNNGG | 3 cut(s) | 289, 651, 687 |
| BssMI | GATC | 4 cut(s) | 94, 467, 527, 566 |
| BssSI | CACGAG | 1 cut(s) | 225 |
| BssT1I | CCWWGG | 2 cut(s) | 289, 651 |
| Bst2BI | CACGAG | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 1 cut(s) | 353 |
| Bst6I | CTCTTC | 2 cut(s) | 255, 852 |
| BstAFI | CTTAAG | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 271 |
| BstDEI | CTNAG | 1 cut(s) | 495 |
| BstEII | GGTNACC | 1 cut(s) | 230 |
| BstF5I | GGATG | 2 cut(s) | 260, 364 |
| BstKTI | GATC | 4 cut(s) | 97, 470, 530, 569 |
| BstMBI | GATC | 4 cut(s) | 94, 467, 527, 566 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstNSI | RCATGY | 1 cut(s) | 44 |
| BstPI | GGTNACC | 1 cut(s) | 230 |
| BstSFI | CTRYAG | 4 cut(s) | 349, 438, 444, 731 |
| BstV1I | GCAGC | 1 cut(s) | 140 |
| BstV2I | GAAGAC | 1 cut(s) | 511 |
| BstX2I | RGATCY | 4 cut(s) | 94, 467, 527, 566 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 652 |
| BstYI | RGATCY | 4 cut(s) | 94, 467, 527, 566 |
| BsuRI | GGCC | 1 cut(s) | 656 |
| BtsCI | GGATG | 2 cut(s) | 260, 364 |
| BtsI | GCAGTG | 1 cut(s) | 394 |
| BtsIMutI | CAGTG | 2 cut(s) | 394, 773 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 271 |
| CaiI | CAGNNNCTG | 2 cut(s) | 530, 821 |
| Cfr10I | RCCGGY | 1 cut(s) | 124 |
| CseI | GACGC | 1 cut(s) | 736 |
| CviAII | CATG | 1 cut(s) | 41 |
| DdeI | CTNAG | 1 cut(s) | 495 |
| DpnI | GATC | 4 cut(s) | 96, 469, 529, 568 |
| DpnII | GATC | 4 cut(s) | 94, 467, 527, 566 |
| DraIII | CACNNNGTG | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 2 cut(s) | 255, 852 |
| EarI | CTCTTC | 2 cut(s) | 255, 852 |
| EciI | GGCGGA | 1 cut(s) | 111 |
| Eco130I | CCWWGG | 2 cut(s) | 289, 651 |
| Eco32I | GATATC | 1 cut(s) | 631 |
| Eco57I | CTGAAG | 5 cut(s) | 292, 336, 453, 552, 558 |
| Eco91I | GGTNACC | 1 cut(s) | 230 |
| EcoO65I | GGTNACC | 1 cut(s) | 230 |
| EcoRI | GAATTC | 1 cut(s) | 636 |
| EcoRV | GATATC | 1 cut(s) | 631 |
| EcoT14I | CCWWGG | 2 cut(s) | 289, 651 |
| ErhI | CCWWGG | 2 cut(s) | 289, 651 |
| FaeI | CATG | 1 cut(s) | 44 |
| FatI | CATG | 1 cut(s) | 40 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| FokI | GGATG | 2 cut(s) | 267, 371 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| FspBI | CTAG | 3 cut(s) | 284, 543, 878 |
| GluI | GCNGC | 1 cut(s) | 129 |
| GsuI | CTGGAG | 1 cut(s) | 45 |
| HaeIII | GGCC | 1 cut(s) | 656 |
| HapII | CCGG | 1 cut(s) | 125 |
| HgaI | GACGC | 1 cut(s) | 736 |
| Hin1II | CATG | 1 cut(s) | 44 |
| HindIII | AAGCTT | 1 cut(s) | 678 |
| HpaII | CCGG | 1 cut(s) | 125 |
| HphI | GGTGA | 6 cut(s) | 213, 242, 407, 758, 875, 895 |
| Hpy188I | TCNGA | 7 cut(s) | 316, 503, 532, 613, 635, 691, 920 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 89, 626, 854 |
| HpyAV | CCTTC | 7 cut(s) | 76, 106, 244, 311, 316, 483, 507 |
| HpyCH4III | ACNGT | 1 cut(s) | 353 |
| HpyCH4IV | ACGT | 2 cut(s) | 484, 895 |
| HpyCH4V | TGCA | 1 cut(s) | 903 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 1 cut(s) | 495 |
| HpySE526I | ACGT | 2 cut(s) | 484, 895 |
| Hsp92II | CATG | 1 cut(s) | 44 |
| KroI | GCCGGC | 1 cut(s) | 124 |
| KroNI | GCCGGC | 1 cut(s) | 126 |
| Kzo9I | GATC | 4 cut(s) | 94, 467, 527, 566 |
| LmnI | GCTCC | 2 cut(s) | 20, 428 |
| Lsp1109I | GCAGC | 1 cut(s) | 140 |
| LweI | GCATC | 1 cut(s) | 354 |
| MaeI | CTAG | 3 cut(s) | 284, 543, 878 |
| MaeII | ACGT | 2 cut(s) | 484, 895 |
| MaeIII | GTNAC | 5 cut(s) | 230, 520, 719, 746, 788 |
| MalI | GATC | 4 cut(s) | 96, 469, 529, 568 |
| MboI | GATC | 4 cut(s) | 94, 467, 527, 566 |
| MboII | GAAGA | 7 cut(s) | 104, 121, 272, 516, 522, 807, 869 |
| MflI | RGATCY | 4 cut(s) | 94, 467, 527, 566 |
| MluCI | AATT | 7 cut(s) | 184, 209, 325, 555, 636, 762, 810 |
| MmeI | TCCRAC | 2 cut(s) | 591, 806 |
| MroNI | GCCGGC | 1 cut(s) | 124 |
| MseI | TTAA | 1 cut(s) | 174 |
| MslI | CAYNNNNRTG | 1 cut(s) | 588 |
| MspA1I | CMGCKG | 1 cut(s) | 131 |
| MspCI | CTTAAG | 1 cut(s) | 173 |
| MspI | CCGG | 1 cut(s) | 125 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NaeI | GCCGGC | 1 cut(s) | 126 |
| NdeII | GATC | 4 cut(s) | 94, 467, 527, 566 |
| NgoMIV | GCCGGC | 1 cut(s) | 124 |
| NlaIII | CATG | 1 cut(s) | 44 |
| NlaIV | GGNNCC | 1 cut(s) | 180 |
| NmuCI | GTSAC | 3 cut(s) | 230, 719, 746 |
| NspI | RCATGY | 1 cut(s) | 44 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 232 |
| PdiI | GCCGGC | 1 cut(s) | 126 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 188 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PsiI | TTATAA | 1 cut(s) | 671 |
| PspEI | GGTNACC | 1 cut(s) | 230 |
| PspN4I | GGNNCC | 1 cut(s) | 180 |
| PstNI | CAGNNNCTG | 2 cut(s) | 530, 821 |
| PsuI | RGATCY | 4 cut(s) | 94, 467, 527, 566 |
| PvuII | CAGCTG | 1 cut(s) | 131 |
| RseI | CAYNNNNRTG | 1 cut(s) | 588 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 4 cut(s) | 94, 467, 527, 566 |
| SfaNI | GCATC | 1 cut(s) | 354 |
| SfcI | CTRYAG | 4 cut(s) | 349, 438, 444, 731 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 588 |
| SmlI | CTYRAG | 2 cut(s) | 73, 173 |
| SmoI | CTYRAG | 2 cut(s) | 73, 173 |
| Sse9I | AATT | 7 cut(s) | 184, 209, 325, 555, 636, 762, 810 |
| SsiI | CCGC | 1 cut(s) | 122 |
| SspI | AATATT | 2 cut(s) | 739, 915 |
| SspMI | CTAG | 3 cut(s) | 284, 543, 878 |
| StyI | CCWWGG | 2 cut(s) | 289, 651 |
| TaaI | ACNGT | 1 cut(s) | 353 |
| TaiI | ACGT | 2 cut(s) | 487, 898 |
| TaqII | GACCGA | 1 cut(s) | 249 |
| TasI | AATT | 7 cut(s) | 184, 209, 325, 555, 636, 762, 810 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TscAI | CASTG | 2 cut(s) | 394, 773 |
| TseFI | GTSAC | 3 cut(s) | 230, 719, 746 |
| TseI | GCWGC | 1 cut(s) | 128 |
| Tsp45I | GTSAC | 3 cut(s) | 230, 719, 746 |
| TspDTI | ATGAA | 3 cut(s) | 495, 594, 765 |
| TspGWI | ACGGA | 1 cut(s) | 807 |
| TspRI | CASTG | 2 cut(s) | 394, 773 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 188 |
| Vha464I | CTTAAG | 1 cut(s) | 173 |
| XapI | RAATTY | 2 cut(s) | 325, 636 |
| XceI | RCATGY | 1 cut(s) | 44 |
| XspI | CTAG | 3 cut(s) | 284, 543, 878 |