Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0009378

Physical Location & Seq

Genomic Coordinates Forward (+)

1954907 .. 1957794

Gene Structure 2888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g03040.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGGGGAGCTACAGAAACGGCGGCCGTGGCGGGGACCAAAGCGGCACCAGCAATGGCGACTCTGGCGGCGCCCCGGTGGACAAAGGCGTCGACTTCGCCAACTACTTCTGCACCTACGCCTTCCTCTACCACCAGAAGGAGATTCGATCCGATCGAGTCCGCATGGACGCTTACTACAACGCCGTTTTCAAGAACAAGCACCACTTCCATGGCAAGGCTGTGTTGGATGTGGGAGCAGGGAGTGGCATTCTCGCAATTTGGTCAGCGCAAGCTGGGGCGAGGAAGGTTTATGCCGTTGAAGCGACTTCCATGGCCGAACATGCACGTGCAGTTGTAAAAGCGAATAACCTTCAGGACGTGGTTGAGGTGATCGAGGGCTCCATGGAGGATGTTGTCCTGCCTGAGAAAGTGGACGTGATCATTTCTGAGTGGATGGGGTATTTCCTGCTGCGTGAATCGATGTTTGATTCAGTAATATGTGCACGTGACCGATGGTTAAAGCCAACCGGAGTCATGTATCCAAGCCATGCTACCATGTGGGTGGCACCTATTAGGACTGGATTGGGAGATCAAAAAAGTAATGATTATTATTCATCTATGGACGAATGGGAACGTTTCACAGATGAGACAAAAAATTATTATGGTGTTGATATGAGTGTTCTAACAAAGCCTTTCTCGCAAGAGCAGAAGAAATACTATCTTCAGACATCATTGTGGAACAACCTTCATCCACATCAAGTTATAGGGACAGCTGCTTCAATAAAGGAGATTGATTGTTTAACTGCCTCAGTCAGTGACATCCTCGAAGTCAATTCGAACTTTTCATCAACCGTAACTCTTCAGAACACAAGGCTCTGTGGGTACGGGGGATGGTTTGATGTTCAATTTCGAGGAAGAAAGGAGGATCCAGCTCAGGAAGAAGTCCAGTTGACTACTGCTCCTAGTGTGGACGACGGCACTCACTGGGGCCAACAGGTTTTCCTGTTGAACCCTCCGGCTCGTATCACTGAAGGGGATAAACTAAATGGTTCTTTCTCAATGAAACGATCAAAGGAGAATCATAGATTAATGGAGGTTGAGTTCAGCTGTGAGATTCAACAGCAGTCTGGCGAGTTAGTTCCGCGTTTCACAAATAGATATTTCATAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009791 GO:0009889 GO:0009987 GO:0010228 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016277 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019919 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034969 GO:0035241 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04068 ko04922 map04068 map04922

Pfam Domains

Protein Families

PrmA

Protein Analysis

384

Amino Acids

43.13

Weight (kDa)

5.55

Isoelectric Point (pI)

37.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04870
fragaria_vesca	FvH4_1g03880 FvH4_1g03880 FvH4_1g03880 FvH4_1g03880
malus_domestica	MD02G1037100.v1.1 MD15G1177300.v1.1
prunus_persica	Prupe.7G238300_v2.0.a1
pyrus_communis	pycom02g03040 pycom15g15860
rosa_chinensis	RchiOBHm_Chr2g0089261 RchiOBHm_Chr2g0089341
rosa_laevigata	RLG00000016009
rosa_multiflora	Rmu_sc0003382.1_g000036 Rmu_sc0008322.1_g000018
rosa_roxburghii	Rroxscaffold_2G00152080
rosa_rugosa	Rorug01G0488700
rosa_samantha	Rh2AG044900 Rh2BG043400 Rh2CG044800 Rh2DG043700
rosa_wichuraiana	Rw2G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	86
AccB1I	GGYRCC	3 cut(s)	44, 68, 544
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	1 cut(s)	1123
AciI	CCGC	6 cut(s)	21, 30, 42, 66, 160, 1121
AclI	AACGTT	1 cut(s)	613
AclWI	GGATC	3 cut(s)	141, 899, 912
AcoI	YGGCCR	2 cut(s)	22, 312
AcuI	CTGAAG	4 cut(s)	335, 686, 824, 1029
AcvI	CACGTG	2 cut(s)	326, 485
AcyI	GRCGYC	2 cut(s)	69, 87
AfaI	GTAC	1 cut(s)	863
AfiI	CCNNNNNNNGG	3 cut(s)	31, 136, 214
AgsI	TTSAA	6 cut(s)	190, 299, 759, 884, 988, 1097
AjiI	CACGTC	2 cut(s)	358, 415
AloI	GAACNNNNNNTCC	2 cut(s)	1064, 1096
AluBI	AGCT	5 cut(s)	9, 272, 752, 911, 1086
AluI	AGCT	5 cut(s)	9, 272, 752, 911, 1086
Alw21I	GWGCWC	1 cut(s)	484
Alw26I	GTCTC	1 cut(s)	620
Alw44I	GTGCAC	1 cut(s)	480
AlwI	GGATC	3 cut(s)	141, 899, 912
AoxI	GGCC	3 cut(s)	22, 312, 967
ApaLI	GTGCAC	1 cut(s)	480
ApeKI	GCWGC	2 cut(s)	448, 752
AseI	ATTAAT	1 cut(s)	1067
AspLEI	GCGC	2 cut(s)	71, 268
AspS9I	GGNCC	2 cut(s)	34, 967
AsuC2I	CCSGG	1 cut(s)	74
AsuHPI	GGTGA	1 cut(s)	379
AsuII	TTCGAA	1 cut(s)	815
AvaII	GGWCC	1 cut(s)	34
BaeGI	GKGCMC	1 cut(s)	484
BamHI	GGATCC	1 cut(s)	904
BanI	GGYRCC	3 cut(s)	44, 68, 544
BanII	GRGCYC	1 cut(s)	380
BbrPI	CACGTG	2 cut(s)	326, 485
Bbv12I	GWGCWC	1 cut(s)	484
BbvI	GCAGC	2 cut(s)	435, 739
BccI	CCATC	3 cut(s)	427, 486, 864
BceAI	ACGGC	5 cut(s)	9, 34, 167, 278, 970
BciVI	GTATCC	1 cut(s)	528
BclI	TGATCA	1 cut(s)	417
BcnI	CCSGG	1 cut(s)	74
BcoDI	GTCTC	1 cut(s)	620
BfaI	CTAG	1 cut(s)	942
BfmI	CTRYAG	1 cut(s)	10
BfoI	RGCGCY	1 cut(s)	72
BfuI	GTATCC	1 cut(s)	528
BisI	GCNGC	5 cut(s)	22, 43, 67, 449, 753
BlsI	GCNGC	5 cut(s)	23, 44, 68, 450, 754
Bme1390I	CCNGG	1 cut(s)	74
Bme18I	GGWCC	1 cut(s)	34
BmgBI	CACGTC	2 cut(s)	358, 415
BmgT120I	GGNCC	2 cut(s)	34, 967
BmiI	GGNNCC	7 cut(s)	35, 46, 70, 379, 546, 906, 968
BmrFI	CCNGG	1 cut(s)	74
BmrI	ACTGGG	1 cut(s)	973
BmuI	ACTGGG	1 cut(s)	973
Bpu10I	CCTNAGC	1 cut(s)	912
Bpu14I	TTCGAA	1 cut(s)	815
BpuMI	CCSGG	1 cut(s)	74
Bsa29I	ATCGAT	1 cut(s)	458
BsaAI	YACGTR	2 cut(s)	326, 485
BsaHI	GRCGYC	2 cut(s)	69, 87
BsaJI	CCNNGG	5 cut(s)	25, 72, 208, 309, 381
BsaWI	WCCGGW	1 cut(s)	506
BsaXI	ACNNNNNCTCC	4 cut(s)	922, 952, 1064, 1094
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 136, 214
Bse1I	ACTGG	3 cut(s)	562, 925, 968
Bse3DI	GCAATG	1 cut(s)	58
BseCI	ATCGAT	1 cut(s)	458
BseDI	CCNNGG	5 cut(s)	25, 72, 208, 309, 381
BseGI	GGATG	6 cut(s)	232, 394, 438, 727, 798, 875
BseLI	CCNNNNNNNGG	3 cut(s)	31, 136, 214
BseMI	GCAATG	1 cut(s)	58
BseMII	CTCAG	4 cut(s)	393, 417, 801, 926
BseNI	ACTGG	3 cut(s)	562, 925, 968
BseSI	GKGCMC	1 cut(s)	484
BseX3I	CGGCCG	1 cut(s)	22
BseXI	GCAGC	2 cut(s)	435, 739
BseYI	CCCAGC	1 cut(s)	272
BsgI	GTGCAG	2 cut(s)	94, 348
Bsh1236I	CGCG	1 cut(s)	1123
Bsh1285I	CGRYCG	2 cut(s)	25, 154
BshFI	GGCC	3 cut(s)	24, 314, 969
BshNI	GGYRCC	3 cut(s)	44, 68, 544
BshVI	ATCGAT	1 cut(s)	458
BsiEI	CGRYCG	2 cut(s)	25, 154
BsiHKAI	GWGCWC	1 cut(s)	484
BsiSI	CCGG	3 cut(s)	74, 507, 995
BslFI	GGGAC	2 cut(s)	47, 760
BslI	CCNNNNNNNGG	3 cut(s)	31, 136, 214
BsmAI	GTCTC	1 cut(s)	620
BsmFI	GGGAC	2 cut(s)	47, 760
BsmI	GAATGC	1 cut(s)	246
BsnI	GGCC	3 cut(s)	24, 314, 969
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	2 cut(s)	380, 484
Bsp143I	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
Bsp19I	CCATGG	3 cut(s)	208, 309, 381
BspACI	CCGC	6 cut(s)	21, 30, 42, 66, 160, 1121
BspANI	GGCC	3 cut(s)	24, 314, 969
BspCNI	CTCAG	4 cut(s)	394, 418, 800, 925
BspDI	ATCGAT	1 cut(s)	458
BspFNI	CGCG	1 cut(s)	1123
BspLI	GGNNCC	7 cut(s)	35, 46, 70, 379, 546, 906, 968
BspPI	GGATC	3 cut(s)	141, 899, 912
BspT104I	TTCGAA	1 cut(s)	815
BspT107I	GGYRCC	3 cut(s)	44, 68, 544
BsrDI	GCAATG	1 cut(s)	58
BsrI	ACTGG	3 cut(s)	562, 925, 968
BssECI	CCNNGG	5 cut(s)	25, 72, 208, 309, 381
BssMI	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
BssNI	GRCGYC	2 cut(s)	69, 87
BssT1I	CCWWGG	3 cut(s)	208, 309, 381
Bst4CI	ACNGT	1 cut(s)	832
Bst6I	CTCTTC	1 cut(s)	843
BstACI	GRCGYC	2 cut(s)	69, 87
BstBAI	YACGTR	2 cut(s)	326, 485
BstBI	TTCGAA	1 cut(s)	815
BstC8I	GCNNGC	1 cut(s)	270
BstDEI	CTNAG	4 cut(s)	402, 426, 787, 912
BstDSI	CCRYGG	4 cut(s)	25, 208, 309, 381
BstF5I	GGATG	6 cut(s)	232, 394, 438, 727, 798, 875
BstFNI	CGCG	1 cut(s)	1123
BstH2I	RGCGCY	1 cut(s)	72
BstHHI	GCGC	2 cut(s)	71, 268
BstKTI	GATC	7 cut(s)	149, 154, 372, 420, 571, 907, 1049
BstMAI	GTCTC	1 cut(s)	620
BstMBI	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
BstMCI	CGRYCG	2 cut(s)	25, 154
BstMWI	GCNNNNNNNGC	6 cut(s)	27, 48, 63, 299, 320, 676
BstNSI	RCATGY	1 cut(s)	323
BstSCI	CCNGG	1 cut(s)	72
BstSFI	CTRYAG	1 cut(s)	10
BstSLI	GKGCMC	1 cut(s)	484
BstUI	CGCG	1 cut(s)	1123
BstV1I	GCAGC	2 cut(s)	435, 739
BstX2I	RGATCY	1 cut(s)	904
BstXI	CCANNNNNNTGG	2 cut(s)	209, 541
BstYI	RGATCY	1 cut(s)	904
BstZI	CGGCCG	1 cut(s)	22
Bsu15I	ATCGAT	1 cut(s)	458
BsuI	GTATCC	1 cut(s)	528
BsuRI	GGCC	3 cut(s)	24, 314, 969
BsuTUI	ATCGAT	1 cut(s)	458
BtgI	CCRYGG	4 cut(s)	25, 208, 309, 381
BtrI	CACGTC	2 cut(s)	358, 415
BtsCI	GGATG	6 cut(s)	232, 394, 438, 727, 798, 875
BtsIMutI	CAGTG	3 cut(s)	799, 961, 1005
Cac8I	GCNNGC	1 cut(s)	270
CfoI	GCGC	2 cut(s)	71, 268
Cfr13I	GGNCC	2 cut(s)	34, 967
ClaI	ATCGAT	1 cut(s)	458
CseI	GACGC	2 cut(s)	76, 176
Csp6I	GTAC	1 cut(s)	862
CviAII	CATG	8 cut(s)	163, 209, 310, 320, 382, 514, 527, 535
CviQI	GTAC	1 cut(s)	862
DdeI	CTNAG	4 cut(s)	402, 426, 787, 912
DinI	GGCGCC	1 cut(s)	70
DpnI	GATC	7 cut(s)	148, 153, 371, 419, 570, 906, 1048
DpnII	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	2 cut(s)	22, 312
EagI	CGGCCG	1 cut(s)	22
Eam1104I	CTCTTC	1 cut(s)	843
EarI	CTCTTC	1 cut(s)	843
EclXI	CGGCCG	1 cut(s)	22
Eco130I	CCWWGG	3 cut(s)	208, 309, 381
Eco24I	GRGCYC	1 cut(s)	380
Eco47I	GGWCC	1 cut(s)	34
Eco52I	CGGCCG	1 cut(s)	22
Eco57I	CTGAAG	4 cut(s)	335, 686, 824, 1029
Eco72I	CACGTG	2 cut(s)	326, 485
EcoT14I	CCWWGG	3 cut(s)	208, 309, 381
EcoT38I	GRGCYC	1 cut(s)	380
EgeI	GGCGCC	1 cut(s)	70
EheI	GGCGCC	1 cut(s)	70
ErhI	CCWWGG	3 cut(s)	208, 309, 381
FaeI	CATG	8 cut(s)	166, 212, 313, 323, 385, 517, 530, 538
FalI	AAGNNNNNCTT	2 cut(s)	188, 220
FaqI	GGGAC	2 cut(s)	47, 760
FatI	CATG	8 cut(s)	162, 208, 309, 319, 381, 513, 526, 534
FauI	CCCGC	1 cut(s)	23
FbaI	TGATCA	1 cut(s)	417
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	5 cut(s)	22, 43, 67, 449, 753
FokI	GGATG	6 cut(s)	239, 401, 445, 714, 785, 882
FriOI	GRGCYC	1 cut(s)	380
Fsp4HI	GCNGC	5 cut(s)	22, 43, 67, 449, 753
FspBI	CTAG	1 cut(s)	942
GlaI	GCGC	2 cut(s)	70, 267
GluI	GCNGC	5 cut(s)	22, 43, 67, 449, 753
GsaI	CCCAGC	1 cut(s)	276
HaeII	RGCGCY	1 cut(s)	72
HaeIII	GGCC	3 cut(s)	24, 314, 969
HapII	CCGG	3 cut(s)	74, 507, 995
HgaI	GACGC	2 cut(s)	76, 176
HhaI	GCGC	2 cut(s)	71, 268
Hin1I	GRCGYC	2 cut(s)	69, 87
Hin1II	CATG	8 cut(s)	166, 212, 313, 323, 385, 517, 530, 538
Hin6I	GCGC	2 cut(s)	69, 266
HinP1I	GCGC	2 cut(s)	69, 266
HincII	GTYRAC	2 cut(s)	91, 930
HindII	GTYRAC	2 cut(s)	91, 930
HinfI	GANTC	8 cut(s)	59, 142, 156, 455, 467, 510, 1057, 1093
HpaII	CCGG	3 cut(s)	74, 507, 995
HphI	GGTGA	1 cut(s)	379
Hpy166II	GTNNAC	6 cut(s)	79, 91, 412, 482, 930, 949
Hpy188I	TCNGA	4 cut(s)	151, 427, 705, 843
Hpy188III	TCNNGA	3 cut(s)	190, 353, 914
Hpy8I	GTNNAC	6 cut(s)	79, 91, 412, 482, 930, 949
Hpy99I	CGWCG	2 cut(s)	92, 956
HpyAV	CCTTC	6 cut(s)	130, 130, 277, 359, 734, 1004
HpyCH4III	ACNGT	1 cut(s)	832
HpyCH4IV	ACGT	5 cut(s)	325, 357, 414, 484, 613
HpyCH4V	TGCA	4 cut(s)	111, 323, 329, 482
HpyF10VI	GCNNNNNNNGC	6 cut(s)	27, 48, 63, 299, 320, 676
HpyF3I	CTNAG	4 cut(s)	402, 426, 787, 912
HpySE526I	ACGT	5 cut(s)	325, 357, 414, 484, 613
Hsp92I	GRCGYC	2 cut(s)	69, 87
Hsp92II	CATG	8 cut(s)	166, 212, 313, 323, 385, 517, 530, 538
HspAI	GCGC	2 cut(s)	69, 266
KasI	GGCGCC	1 cut(s)	68
Ksp22I	TGATCA	1 cut(s)	417
Kzo9I	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
LmnI	GCTCC	4 cut(s)	6, 233, 383, 943
Lsp1109I	GCAGC	2 cut(s)	435, 739
MaeI	CTAG	1 cut(s)	942
MaeII	ACGT	5 cut(s)	325, 357, 414, 484, 613
MaeIII	GTNAC	3 cut(s)	485, 794, 832
MalI	GATC	7 cut(s)	148, 153, 371, 419, 570, 906, 1048
MboI	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
MboII	GAAGA	5 cut(s)	692, 700, 830, 906, 929
MflI	RGATCY	1 cut(s)	904
MhlI	GDGCHC	2 cut(s)	380, 484
MluCI	AATT	4 cut(s)	255, 634, 811, 884
Mly113I	GGCGCC	1 cut(s)	69
MlyI	GAGTC	3 cut(s)	53, 165, 519
MmeI	TCCRAC	1 cut(s)	204
MseI	TTAA	3 cut(s)	497, 779, 1067
MslI	CAYNNNNRTG	4 cut(s)	207, 324, 539, 712
MspA1I	CMGCKG	2 cut(s)	752, 1086
MspI	CCGG	3 cut(s)	74, 507, 995
MspR9I	CCNGG	1 cut(s)	74
Mva1269I	GAATGC	1 cut(s)	246
MvnI	CGCG	1 cut(s)	1123
MwoI	GCNNNNNNNGC	6 cut(s)	27, 48, 63, 299, 320, 676
NarI	GGCGCC	1 cut(s)	69
NciI	CCSGG	1 cut(s)	74
NcoI	CCATGG	3 cut(s)	208, 309, 381
NdeII	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
NlaIII	CATG	8 cut(s)	166, 212, 313, 323, 385, 517, 530, 538
NlaIV	GGNNCC	7 cut(s)	35, 46, 70, 379, 546, 906, 968
NmuCI	GTSAC	2 cut(s)	485, 794
NspI	RCATGY	1 cut(s)	323
NspV	TTCGAA	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	1 cut(s)	151
PctI	GAATGC	1 cut(s)	246
PfeI	GAWTC	5 cut(s)	142, 455, 467, 1057, 1093
PkrI	GCNGC	5 cut(s)	23, 44, 68, 450, 754
Ple19I	CGATCG	1 cut(s)	154
PleI	GAGTC	3 cut(s)	53, 164, 518
PluTI	GGCGCC	1 cut(s)	72
PmaCI	CACGTG	2 cut(s)	326, 485
PmlI	CACGTG	2 cut(s)	326, 485
PpsI	GAGTC	3 cut(s)	53, 164, 518
Ppu21I	YACGTR	2 cut(s)	326, 485
PshBI	ATTAAT	1 cut(s)	1067
Psp1406I	AACGTT	1 cut(s)	613
PspCI	CACGTG	2 cut(s)	326, 485
PspFI	CCCAGC	1 cut(s)	272
PspN4I	GGNNCC	7 cut(s)	35, 46, 70, 379, 546, 906, 968
PspPI	GGNCC	2 cut(s)	34, 967
PsuI	RGATCY	1 cut(s)	904
PvuI	CGATCG	1 cut(s)	154
PvuII	CAGCTG	2 cut(s)	752, 1086
RsaI	GTAC	1 cut(s)	863
RsaNI	GTAC	1 cut(s)	862
RseI	CAYNNNNRTG	4 cut(s)	207, 324, 539, 712
SalI	GTCGAC	1 cut(s)	89
SaqAI	TTAA	3 cut(s)	497, 779, 1067
SatI	GCNGC	5 cut(s)	22, 43, 67, 449, 753
Sau3AI	GATC	7 cut(s)	146, 151, 369, 417, 568, 904, 1046
Sau96I	GGNCC	2 cut(s)	34, 967
SchI	GAGTC	3 cut(s)	53, 165, 519
ScrFI	CCNGG	1 cut(s)	74
SduI	GDGCHC	2 cut(s)	380, 484
SfcI	CTRYAG	1 cut(s)	10
SfoI	GGCGCC	1 cut(s)	70
SfuI	TTCGAA	1 cut(s)	815
SinI	GGWCC	1 cut(s)	34
SmiMI	CAYNNNNRTG	4 cut(s)	207, 324, 539, 712
Sse9I	AATT	4 cut(s)	255, 634, 811, 884
SsiI	CCGC	6 cut(s)	21, 30, 42, 66, 160, 1121
SspDI	GGCGCC	1 cut(s)	68
SspMI	CTAG	1 cut(s)	942
StyD4I	CCNGG	1 cut(s)	72
StyI	CCWWGG	3 cut(s)	208, 309, 381
TaaI	ACNGT	1 cut(s)	832
TaiI	ACGT	5 cut(s)	328, 360, 417, 487, 616
TaqI	TCGA	8 cut(s)	90, 145, 154, 372, 458, 804, 815, 889
TaqII	GACCGA	1 cut(s)	504
TasI	AATT	4 cut(s)	255, 634, 811, 884
TauI	GCSGC	3 cut(s)	24, 45, 69
TfiI	GAWTC	5 cut(s)	142, 455, 467, 1057, 1093
Tru1I	TTAA	3 cut(s)	497, 779, 1067
Tru9I	TTAA	3 cut(s)	497, 779, 1067
TscAI	CASTG	3 cut(s)	799, 968, 1012
TseFI	GTSAC	2 cut(s)	485, 794
TseI	GCWGC	2 cut(s)	448, 752
Tsp45I	GTSAC	2 cut(s)	485, 794
TspDTI	ATGAA	5 cut(s)	582, 716, 813, 1055, 1132
TspRI	CASTG	3 cut(s)	799, 968, 1012
VneI	GTGCAC	1 cut(s)	480
VpaK11BI	GGWCC	1 cut(s)	34
VspI	ATTAAT	1 cut(s)	1067
XceI	RCATGY	1 cut(s)	323
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	1 cut(s)	942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.