pycom02g10640
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
7378790 .. 7380890
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g10640.4

Sequence Viewer

Length: 1422 bp
ATGAGTCCTGCACATAGCCATGTTGAGCAATCAAGAAATACCCTCTTATTTGCAAGCTGTGCTAAAGAAGTGACAACAAGCGCACAAGTTAACGTGGTCATGTCGGATAAAGCATTGGTGAAGCATTTGCAAAAAGAATTGACTAGACTAGAGAATGAGTTGAGAGGTTCAGGACACAAAATTGTTTCAGCTGATTCTTCAACATTACTGAGAGAAAAGGACCTTCAAATTGAAAAGCTCAAAAAAGAGTTATCGGAGCTAACTCAGCAACGAGACCTTGCTCAATCTCAGGTTAAGGATCTGGTGCGAGTGCTTGGAGATGATAAACCATCAGAAGAGGATCTGGAACGTTATTACCCCAAATTGCGTGGGCGAGCTTCATGGGACTTTGAAATGCAGAAGGCAGGTGCGCCTGTTCTGGCCGTCTCTCGCGGCCAAGCCAACAATGTGAGATCTTTTGGCACCTCTCAGTATTCTGATGGAGACAGTAGGACTAGTTCAGAGGAGACTCTGTTCCAACTTCCTGACTTGGAAGAGAATTTCACGCACACTGATTCCTCCCGGCAGTTATCAGATGGCATTCCTAATTTTGTTGACGGTAATCTGCATCAAGAGCAAGGCAAAGAACATTTTGATGGAAATTCAGAGGATTTCTGCAAGGAAGTTCGCTGCATTGAAGTGGAAGAGTCTGGCACAAACAGATATATAGCGTCAGATATATCAGATTCAAGTGCTAGCAGATACCAAAACTCAAATATGTCGTCTCCTTTAGCAAACACAGCTACCTCAGGACTGACCACAGTCGAAAATGGTGATGGCACAAATCAGGAATTGGAGTCACCCCTACCTAAACAAAAAGGTTTTGTAGTTCCATCTTCTGAAAGGACACCTCAATGGCTGCCCGAGAAAGATATGTTTTGCCCCTCTGTTGTGATGTTGAGGAGTAGAAGCTGCAAAGCAAGGCTTATGAATAATTCGTCTCCATGGTGGCTTGAGTTAGTAGAGAAGAATGAGAGCACACCTGCAATTGAGTATGAGAAAAAATTTATAGGAAGGCCCGAGGGTTTCCAAAAGAAACTTCCTTCACTGAACTATGGTGCTGAGACTGAAAGGCTATCAAGAAATGCTTCTCAGGCTTCTGCAAGAAGTGCAGTTATTGATGAGCGTAAAGCACAGGATACAAAATCCACAACTAATGACAAGGTAACTGAAAGCAGTACTTTAGTTGAAGGAACAGAGGAAACGACTGATACACAATGCAATACTCAACTTGCTGATTCTGTGGTACCGGAGACGGATTCAATGCCCATACCATCTCCAAAGGATGTAAAAGATGTTGGCTTGGACCCAATGCCCATTGATGACGAAAGCCCTTCAAGGTGGCCTTCAGAATTTAACAAGCTGCAAAGAGAGATCGATTGA

Protein Analysis

474

Amino Acids

52.79

Weight (kDa)

4.93

Isoelectric Point (pI)

57.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 395, 1030
Acc36I ACCTGC 2 cut(s) 395, 1030
Acc65I GGTACC 1 cut(s) 1285
AccB1I GGYRCC 2 cut(s) 461, 1285
AccII CGCG 1 cut(s) 432
AciI CCGC 1 cut(s) 432
AclI AACGTT 1 cut(s) 349
AclWI GGATC 2 cut(s) 306, 348
AcoI YGGCCR 2 cut(s) 420, 433
AcsI RAATTY 4 cut(s) 538, 640, 1043, 1391
AcuI CTGAAG 1 cut(s) 1371
AfaI GTAC 2 cut(s) 1219, 1287
AgsI TTSAA 9 cut(s) 201, 227, 233, 392, 677, 729, 1229, 1302, 1377
AhlI ACTAGT 1 cut(s) 494
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
AloI GAACNNNNNNTCC 2 cut(s) 497, 529
AluBI AGCT 8 cut(s) 57, 191, 238, 259, 377, 782, 951, 1402
AluI AGCT 8 cut(s) 57, 191, 238, 259, 377, 782, 951, 1402
Alw21I GWGCWC 1 cut(s) 1019
Alw26I GTCTC 8 cut(s) 267, 430, 477, 500, 768, 984, 1097, 1286
AlwI GGATC 2 cut(s) 306, 348
Ama87I CYCGRG 2 cut(s) 902, 1058
AoxI GGCC 4 cut(s) 420, 433, 1055, 1382
ApeKI GCWGC 4 cut(s) 669, 898, 951, 1402
ApoI RAATTY 4 cut(s) 538, 640, 1043, 1391
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
Asp700I GAANNNNTTC 1 cut(s) 1126
Asp718I GGTACC 1 cut(s) 1285
AspLEI GCGC 2 cut(s) 83, 412
AspS9I GGNCC 3 cut(s) 220, 1056, 1345
AsuC2I CCSGG 1 cut(s) 562
AsuHPI GGTGA 3 cut(s) 130, 824, 831
AsuNHI GCTAGC 1 cut(s) 734
AvaI CYCGRG 2 cut(s) 902, 1058
AvaII GGWCC 2 cut(s) 220, 1345
AxyI CCTNAGG 1 cut(s) 787
BanI GGYRCC 2 cut(s) 461, 1285
Bbv12I GWGCWC 1 cut(s) 1019
BbvI GCAGC 4 cut(s) 656, 885, 938, 1389
BccI CCATC 7 cut(s) 337, 473, 569, 629, 809, 880, 1321
BceAI ACGGC 1 cut(s) 407
BciVI GTATCC 1 cut(s) 1171
BcnI CCSGG 1 cut(s) 562
BcoDI GTCTC 8 cut(s) 267, 430, 477, 500, 768, 984, 1097, 1286
BcuI ACTAGT 1 cut(s) 494
BfaI CTAG 4 cut(s) 144, 149, 495, 735
BfuAI ACCTGC 2 cut(s) 395, 1030
BfuI GTATCC 1 cut(s) 1171
BglII AGATCT 1 cut(s) 452
BisI GCNGC 5 cut(s) 433, 670, 899, 952, 1403
BlsI GCNGC 5 cut(s) 434, 671, 900, 953, 1404
BmcAI AGTACT 1 cut(s) 1219
Bme1390I CCNGG 1 cut(s) 562
Bme18I GGWCC 2 cut(s) 220, 1345
BmeT110I CYCGRG 2 cut(s) 902, 1058
BmgT120I GGNCC 3 cut(s) 220, 1056, 1345
BmiI GGNNCC 3 cut(s) 463, 1287, 1347
BmrFI CCNGG 1 cut(s) 562
BmsI GCATC 1 cut(s) 616
BmtI GCTAGC 1 cut(s) 738
BoxI GACNNNNGTC 1 cut(s) 800
BpuEI CTTGAG 1 cut(s) 1013
BpuMI CCSGG 1 cut(s) 562
Bsa29I ATCGAT 1 cut(s) 1416
BsaI GGTCTC 1 cut(s) 267
BsaJI CCNNGG 2 cut(s) 983, 1059
BsaWI WCCGGW 1 cut(s) 1288
BsaXI ACNNNNNCTCC 2 cut(s) 497, 527
Bse21I CCTNAGG 1 cut(s) 787
BseCI ATCGAT 1 cut(s) 1416
BseDI CCNNGG 2 cut(s) 983, 1059
BseGI GGATG 1 cut(s) 1330
BseMII CTCAG 7 cut(s) 200, 278, 302, 482, 801, 1092, 1145
BseRI GAGGAG 2 cut(s) 518, 955
BseXI GCAGC 4 cut(s) 656, 885, 938, 1389
BsgI GTGCAG 1 cut(s) 1170
Bsh1236I CGCG 1 cut(s) 432
BshFI GGCC 4 cut(s) 422, 435, 1057, 1384
BshNI GGYRCC 2 cut(s) 461, 1285
BshVI ATCGAT 1 cut(s) 1416
BsiHKAI GWGCWC 1 cut(s) 1019
BsiHKCI CYCGRG 2 cut(s) 902, 1058
BsiSI CCGG 2 cut(s) 562, 1289
BslFI GGGAC 1 cut(s) 398
BsmAI GTCTC 8 cut(s) 267, 430, 477, 500, 768, 984, 1097, 1286
BsmBI CGTCTC 4 cut(s) 430, 768, 984, 1286
BsmFI GGGAC 1 cut(s) 398
BsmI GAATGC 1 cut(s) 579
BsnI GGCC 4 cut(s) 422, 435, 1057, 1384
Bso31I GGTCTC 1 cut(s) 267
BsoBI CYCGRG 2 cut(s) 902, 1058
Bsp1286I GDGCHC 1 cut(s) 1019
Bsp143I GATC 4 cut(s) 298, 340, 452, 1413
Bsp19I CCATGG 1 cut(s) 983
BspACI CCGC 1 cut(s) 432
BspANI GGCC 4 cut(s) 422, 435, 1057, 1384
BspCNI CTCAG 7 cut(s) 201, 277, 301, 481, 800, 1093, 1144
BspDI ATCGAT 1 cut(s) 1416
BspFNI CGCG 1 cut(s) 432
BspLI GGNNCC 3 cut(s) 463, 1287, 1347
BspMI ACCTGC 2 cut(s) 395, 1030
BspOI GCTAGC 1 cut(s) 738
BspPI GGATC 2 cut(s) 306, 348
BspT107I GGYRCC 2 cut(s) 461, 1285
BspTNI GGTCTC 1 cut(s) 267
BssECI CCNNGG 2 cut(s) 983, 1059
BssMI GATC 4 cut(s) 298, 340, 452, 1413
BssT1I CCWWGG 1 cut(s) 983
Bst4CI ACNGT 3 cut(s) 488, 599, 802
Bst6I CTCTTC 3 cut(s) 330, 528, 678
BstAPI GCANNNNNTGC 2 cut(s) 59, 1148
BstC8I GCNNGC 3 cut(s) 55, 375, 736
BstDEI CTNAG 7 cut(s) 209, 264, 288, 468, 787, 1101, 1131
BstDSI CCRYGG 1 cut(s) 983
BstF5I GGATG 1 cut(s) 1330
BstFNI CGCG 1 cut(s) 432
BstHHI GCGC 2 cut(s) 83, 412
BstKTI GATC 4 cut(s) 301, 343, 455, 1416
BstMAI GTCTC 8 cut(s) 267, 430, 477, 500, 768, 984, 1097, 1286
BstMBI GATC 4 cut(s) 298, 340, 452, 1413
BstMWI GCNNNNNNNGC 6 cut(s) 59, 265, 613, 779, 1133, 1148
BstPAI GACNNNNGTC 1 cut(s) 800
BstSCI CCNGG 1 cut(s) 560
BstUI CGCG 1 cut(s) 432
BstV1I GCAGC 4 cut(s) 656, 885, 938, 1389
BstX2I RGATCY 3 cut(s) 298, 340, 452
BstYI RGATCY 3 cut(s) 298, 340, 452
Bsu15I ATCGAT 1 cut(s) 1416
Bsu36I CCTNAGG 1 cut(s) 787
BsuI GTATCC 1 cut(s) 1171
BsuRI GGCC 4 cut(s) 422, 435, 1057, 1384
BsuTUI ATCGAT 1 cut(s) 1416
BtgI CCRYGG 1 cut(s) 983
BtsCI GGATG 1 cut(s) 1330
BtsIMutI CAGTG 2 cut(s) 549, 1085
BveI ACCTGC 2 cut(s) 395, 1030
Cac8I GCNNGC 3 cut(s) 55, 375, 736
CfoI GCGC 2 cut(s) 83, 412
Cfr13I GGNCC 3 cut(s) 220, 1056, 1345
ClaI ATCGAT 1 cut(s) 1416
CseI GACGC 1 cut(s) 699
Csp6I GTAC 2 cut(s) 1218, 1286
CspCI CAANNNNNGTGG 2 cut(s) 349, 384
CviAII CATG 4 cut(s) 20, 100, 381, 984
CviQI GTAC 2 cut(s) 1218, 1286
DdeI CTNAG 7 cut(s) 209, 264, 288, 468, 787, 1101, 1131
DpnI GATC 4 cut(s) 300, 342, 454, 1415
DpnII GATC 4 cut(s) 298, 340, 452, 1413
EaeI YGGCCR 2 cut(s) 420, 433
Eam1104I CTCTTC 3 cut(s) 330, 528, 678
EarI CTCTTC 3 cut(s) 330, 528, 678
Eco130I CCWWGG 1 cut(s) 983
Eco31I GGTCTC 1 cut(s) 267
Eco47I GGWCC 2 cut(s) 220, 1345
Eco57I CTGAAG 1 cut(s) 1371
Eco81I CCTNAGG 1 cut(s) 787
Eco88I CYCGRG 2 cut(s) 902, 1058
EcoO109I RGGNCCY 1 cut(s) 220
EcoT14I CCWWGG 1 cut(s) 983
ErhI CCWWGG 1 cut(s) 983
Esp3I CGTCTC 4 cut(s) 430, 768, 984, 1286
FaeI CATG 4 cut(s) 23, 103, 384, 987
FalI AAGNNNNNCTT 8 cut(s) 948, 980, 1111, 1143, 1204, 1236, 1369, 1401
FaqI GGGAC 1 cut(s) 398
FatI CATG 4 cut(s) 19, 99, 380, 983
Fnu4HI GCNGC 5 cut(s) 433, 670, 899, 952, 1403
FokI GGATG 1 cut(s) 1337
Fsp4HI GCNGC 5 cut(s) 433, 670, 899, 952, 1403
FspBI CTAG 4 cut(s) 144, 149, 495, 735
GlaI GCGC 2 cut(s) 82, 411
GluI GCNGC 5 cut(s) 433, 670, 899, 952, 1403
HaeIII GGCC 4 cut(s) 422, 435, 1057, 1384
HapII CCGG 2 cut(s) 562, 1289
HgaI GACGC 1 cut(s) 699
HhaI GCGC 2 cut(s) 83, 412
Hin1II CATG 4 cut(s) 23, 103, 384, 987
Hin6I GCGC 2 cut(s) 81, 410
HinP1I GCGC 2 cut(s) 81, 410
HincII GTYRAC 2 cut(s) 91, 595
HindII GTYRAC 2 cut(s) 91, 595
HinfI GANTC 9 cut(s) 4, 194, 508, 554, 686, 725, 836, 1277, 1298
HpaI GTTAAC 1 cut(s) 91
HpaII CCGG 2 cut(s) 562, 1289
HphI GGTGA 3 cut(s) 130, 824, 831
Hpy166II GTNNAC 2 cut(s) 91, 595
Hpy188III TCNNGA 8 cut(s) 33, 171, 344, 524, 611, 789, 827, 1119
Hpy8I GTNNAC 2 cut(s) 91, 595
HpyAV CCTTC 7 cut(s) 233, 394, 1047, 1092, 1223, 1383, 1395
HpyCH4III ACNGT 3 cut(s) 488, 599, 802
HpyCH4IV ACGT 2 cut(s) 93, 349
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 265, 613, 779, 1133, 1148
HpyF3I CTNAG 7 cut(s) 209, 264, 288, 468, 787, 1101, 1131
HpySE526I ACGT 2 cut(s) 93, 349
Hsp92II CATG 4 cut(s) 23, 103, 384, 987
HspAI GCGC 2 cut(s) 81, 410
KpnI GGTACC 1 cut(s) 1289
KspAI GTTAAC 1 cut(s) 91
Kzo9I GATC 4 cut(s) 298, 340, 452, 1413
LmnI GCTCC 1 cut(s) 256
Lsp1109I GCAGC 4 cut(s) 656, 885, 938, 1389
LweI GCATC 1 cut(s) 616
MaeI CTAG 4 cut(s) 144, 149, 495, 735
MaeII ACGT 2 cut(s) 93, 349
MaeIII GTNAC 3 cut(s) 70, 837, 1204
MalI GATC 4 cut(s) 300, 342, 454, 1415
MboI GATC 4 cut(s) 298, 340, 452, 1413
MboII GAAGA 6 cut(s) 189, 347, 545, 695, 867, 1018
MfeI CAATTG 1 cut(s) 1026
MflI RGATCY 3 cut(s) 298, 340, 452
MhlI GDGCHC 1 cut(s) 1019
MlyI GAGTC 4 cut(s) 13, 502, 695, 845
MmeI TCCRAC 2 cut(s) 84, 541
MroXI GAANNNNTTC 1 cut(s) 1126
MseI TTAA 3 cut(s) 90, 294, 1395
MslI CAYNNNNRTG 4 cut(s) 18, 633, 677, 892
MspA1I CMGCKG 1 cut(s) 191
MspI CCGG 2 cut(s) 562, 1289
MspR9I CCNGG 1 cut(s) 562
MunI CAATTG 1 cut(s) 1026
Mva1269I GAATGC 1 cut(s) 579
MvnI CGCG 1 cut(s) 432
MwoI GCNNNNNNNGC 6 cut(s) 59, 265, 613, 779, 1133, 1148
NciI CCSGG 1 cut(s) 562
NcoI CCATGG 1 cut(s) 983
NdeII GATC 4 cut(s) 298, 340, 452, 1413
NheI GCTAGC 1 cut(s) 734
NlaIII CATG 4 cut(s) 23, 103, 384, 987
NlaIV GGNNCC 3 cut(s) 463, 1287, 1347
NmuCI GTSAC 2 cut(s) 70, 837
PaqCI CACCTGC 2 cut(s) 395, 1030
PctI GAATGC 1 cut(s) 579
PdmI GAANNNNTTC 1 cut(s) 1126
PfeI GAWTC 5 cut(s) 194, 554, 725, 1277, 1298
PkrI GCNGC 5 cut(s) 434, 671, 900, 953, 1404
PleI GAGTC 4 cut(s) 12, 502, 694, 844
PpsI GAGTC 4 cut(s) 12, 502, 694, 844
PpuMI RGGWCCY 1 cut(s) 220
PshAI GACNNNNGTC 1 cut(s) 800
Psp1406I AACGTT 1 cut(s) 349
Psp5II RGGWCCY 1 cut(s) 220
PspN4I GGNNCC 3 cut(s) 463, 1287, 1347
PspPI GGNCC 3 cut(s) 220, 1056, 1345
PspPPI RGGWCCY 1 cut(s) 220
PsrI GAACNNNNNNTAC 2 cut(s) 481, 513
PsuI RGATCY 3 cut(s) 298, 340, 452
PvuII CAGCTG 1 cut(s) 191
RsaI GTAC 2 cut(s) 1219, 1287
RsaNI GTAC 2 cut(s) 1218, 1286
RseI CAYNNNNRTG 4 cut(s) 18, 633, 677, 892
SaqAI TTAA 3 cut(s) 90, 294, 1395
SatI GCNGC 5 cut(s) 433, 670, 899, 952, 1403
Sau3AI GATC 4 cut(s) 298, 340, 452, 1413
Sau96I GGNCC 3 cut(s) 220, 1056, 1345
ScaI AGTACT 1 cut(s) 1219
SchI GAGTC 4 cut(s) 13, 502, 695, 845
ScrFI CCNGG 1 cut(s) 562
SduI GDGCHC 1 cut(s) 1019
SfaNI GCATC 1 cut(s) 616
SinI GGWCC 2 cut(s) 220, 1345
SmiMI CAYNNNNRTG 4 cut(s) 18, 633, 677, 892
SmlI CTYRAG 1 cut(s) 992
SmoI CTYRAG 1 cut(s) 992
SpeI ACTAGT 1 cut(s) 494
SsiI CCGC 1 cut(s) 432
SspMI CTAG 4 cut(s) 144, 149, 495, 735
StyD4I CCNGG 1 cut(s) 560
StyI CCWWGG 1 cut(s) 983
TaaI ACNGT 3 cut(s) 488, 599, 802
TaiI ACGT 2 cut(s) 96, 352
TaqI TCGA 2 cut(s) 804, 1416
TatI WGTACW 1 cut(s) 1217
TauI GCSGC 1 cut(s) 435
TfiI GAWTC 5 cut(s) 194, 554, 725, 1277, 1298
Tru1I TTAA 3 cut(s) 90, 294, 1395
Tru9I TTAA 3 cut(s) 90, 294, 1395
TscAI CASTG 2 cut(s) 556, 1092
TseFI GTSAC 2 cut(s) 70, 837
TseI GCWGC 4 cut(s) 669, 898, 951, 1402
Tsp45I GTSAC 2 cut(s) 70, 837
TspDTI ATGAA 2 cut(s) 369, 983
TspGWI ACGGA 1 cut(s) 1310
TspRI CASTG 2 cut(s) 556, 1092
VpaK11BI GGWCC 2 cut(s) 220, 1345
XapI RAATTY 4 cut(s) 538, 640, 1043, 1391
XmnI GAANNNNTTC 1 cut(s) 1126
XspI CTAG 4 cut(s) 144, 149, 495, 735
ZrmI AGTACT 1 cut(s) 1219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.