Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003296

Physical Location & Seq

Genomic Coordinates Forward (+)

6604448 .. 6607439

Gene Structure 2992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0082100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGACTGCATTGGAATCGGAGCTCGGAACTTTACGGCAATGACGGTGTCGTTTTGCCCCACTGGGAGAAGAGGGTTTATCCCAAGCAATAAAAAGGAAGCTTCTTTCTTTCGCTACGGTGCTTTGTGTAACAAGCATTCTCTGCTGCAAGTGAGAGCCACTGCCGGAAGTGTGGCTGTCAAGGAAGGCTTTGCGGATGAGGAAGATTACGTGAAGGGCGGTGGGTCGGAGCTTCTTTTCGTCCAAATGCAGCGGAACAAGGCCATGGAGAAACAGTCTAAACTCGTCGATAAGCTGCCGCCAATAAGGGATGATGTACTGGATTTGGTGGTGATCGGTTGTGGTCCGGCGGGTCTTGCTCTGGCTGCCGAGTCGGCTAAGTTGGGATTGAAAGTTGGGCTCATTGGCCCTGACCTGCCTTTCACAAACAACTATGGTGTTTGGGAAGATGAATTCAAAGACCTTGGACTAGAAGGGTGTATTGAGCATGTTTGGCAGGACACCATTGTGTATCTTGATGACGAAAGCGACCCCATTTTGTTCGGTCGTGCTTACGGTCGTGTGTGTCGAAATTTGCTCCATGAGGAGCTTTTGAGAAGGTGTGTAGAGTCAGGTGTTTCATACCTTAGTTCAAGGGTGGAGAGTATTGTTGAAGGTAGCAATGGCCATAGCCTTATAGCATGTGAGCATGGTATCAATGTCTCCTCTAGGCTTGCTACTGTTGCATCAGGAGCTGCTTCAGGGAAGCTTTTGCAATATGAGGTGGGTGGTCCAAAGGTCTCTGTCCAAACAGCTTATGGAGTGGAGGTTGAGGTGGAAAGTTATCCATATGATCCCAACCTGATGGTTTTCATGGATTATAGAGACTACACAAAACAAAAAGTTTCATGTTTGGAAGCAGAATATCCCACATTTCTTTATGCCATGGCCATGTCCCCAACAAGAATATTCTTTGAGGAAACTTGCTTGGCTTCGAAAGATGCCATGCCTTTTGATTTATTGAAGAAAAAGCTCTTGTCAAGGTTAAAGACATTGGGAATTCGTATTGTAAAAACTTATGAAGAGGAATGGTCTTGGATTCCAGTTGGGGGGTCATTACCGAATACAGAGCAAAAGAATTTGGCATTTGGTGCTGCTGCTAGCATGGTACATCCAGCCACAGGGTACTCAGTAGTGAGATCTTTGTCGGAGGCCCCAAAATATGCTTCTGTGATTGCAAAGATTTTGAAGCAGGATCATCCTAGGGCCAGTCTTAGCCGTCAAATAAATAATCAGAATATCTCAATGCAAGCCTGGAATACCCTCTGGCCACCAGAAAGGAAACGCCAAAGATCATTCTTCCTGTTTGGACTAGCGCTCATTCTGCAACTGGACATTGAGGGCATTAGGACATTCTTCGATACCTTCTTCCGCTTACCTACTTGGATGTGGCAGGGTTTTCTCGGGTCTTCTCTGTCCTCGGCTGATCTCATGCTCTTTGCCTTGTATATGTTTGTTATAGCACCAAATAGTTTGAGAAGTCGTCTTGTCAAACATCTATTATCAGATCCTACTGGAGCCACTATGATAAAAACCTATCTCACAGCAAACTTGAATTCCTTCCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0030054 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048285 GO:0051225 GO:0055044 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

535

Amino Acids

59.45

Weight (kDa)

7.07

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lycopene_cycl	PF05834	108 - 506	1.5e-150	Lycopene cyclase protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT5G66310 AT5G66310 AT5G66310
fragaria_vesca	FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070
malus_domestica	MD00G1176100.v1.1 MD02G1110400.v1.1 MD02G1135300.v1.1 MD15G1248100.v1.1
prunus_persica	Prupe.7G166000_v2.0.a1 Prupe.7G166000_v2.0.a1
pyrus_communis	pycom02g10640 pycom15g21790
rosa_chinensis	RchiOBHm_Chr2g0099691
rosa_laevigata	RLG00000016906
rosa_multiflora	Rmu_sc0004019.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142830
rosa_rugosa	Rorug02G0082100 Rorug02G0082200 Rorug02G0082300 Rorug02G0082400
rosa_samantha	Rh2AG131700 Rh2BG135000 Rh2CG135900 Rh2DG136400
rosa_wichuraiana	Rw2G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	423
AciI	CCGC	6 cut(s)	194, 219, 253, 299, 350, 1411
AclWI	GGATC	3 cut(s)	827, 1242, 1541
AcoI	YGGCCR	3 cut(s)	664, 927, 1307
AcsI	RAATTY	5 cut(s)	452, 571, 1038, 1117, 1594
AcuI	CTGAAG	1 cut(s)	723
AfaI	GTAC	3 cut(s)	318, 1149, 1166
AfeI	AGCGCT	1 cut(s)	1356
AfiI	CCNNNNNNNGG	2 cut(s)	1088, 1160
AgsI	TTSAA	7 cut(s)	391, 457, 633, 653, 1003, 1228, 1594
AjnI	CCWGG	1 cut(s)	1292
AjuI	GAANNNNNNNTTGG	2 cut(s)	1189, 1221
AleI	CACNNNNGTG	1 cut(s)	506
AluBI	AGCT	9 cut(s)	23, 101, 232, 295, 589, 734, 748, 794, 1012
AluI	AGCT	9 cut(s)	23, 101, 232, 295, 589, 734, 748, 794, 1012
Alw21I	GWGCWC	1 cut(s)	25
Alw26I	GTCTC	3 cut(s)	706, 784, 858
AlwI	GGATC	3 cut(s)	827, 1242, 1541
AlwNI	CAGNNNCTG	1 cut(s)	734
Ama87I	CYCGRG	1 cut(s)	1442
Aor51HI	AGCGCT	1 cut(s)	1356
AoxI	GGCC	7 cut(s)	261, 406, 664, 927, 1191, 1245, 1307
ApeKI	GCWGC	7 cut(s)	145, 250, 295, 365, 734, 1133, 1136
ApoI	RAATTY	5 cut(s)	452, 571, 1038, 1117, 1594
Asp700I	GAANNNNTTC	1 cut(s)	1598
AspA2I	CCTAGG	1 cut(s)	1241
AspLEI	GCGC	1 cut(s)	1357
AspS9I	GGNCC	5 cut(s)	344, 407, 770, 1192, 1245
AsuHPI	GGTGA	1 cut(s)	343
AsuII	TTCGAA	1 cut(s)	974
AsuNHI	GCTAGC	1 cut(s)	1139
AvaI	CYCGRG	1 cut(s)	1442
AvaII	GGWCC	2 cut(s)	344, 770
AvrII	CCTAGG	1 cut(s)	1241
BalI	TGGCCA	3 cut(s)	666, 929, 1309
BanII	GRGCYC	2 cut(s)	25, 402
BbsI	GAAGAC	1 cut(s)	1440
Bbv12I	GWGCWC	1 cut(s)	25
BbvI	GCAGC	7 cut(s)	132, 262, 282, 352, 721, 1120, 1123
BccI	CCATC	1 cut(s)	838
BceAI	ACGGC	2 cut(s)	51, 1242
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	1 cut(s)	1294
BcoDI	GTCTC	3 cut(s)	706, 784, 858
BfaI	CTAG	5 cut(s)	470, 708, 1140, 1242, 1352
BfoI	RGCGCY	1 cut(s)	1358
BfuAI	ACCTGC	1 cut(s)	423
BglI	GCCNNNNNGGC	1 cut(s)	374
BglII	AGATCT	1 cut(s)	1178
BisI	GCNGC	8 cut(s)	146, 251, 296, 299, 366, 735, 1134, 1137
BlnI	CCTAGG	1 cut(s)	1241
BlsI	GCNGC	8 cut(s)	147, 252, 297, 300, 367, 736, 1135, 1138
Bme1390I	CCNGG	1 cut(s)	1294
Bme18I	GGWCC	2 cut(s)	344, 770
BmeT110I	CYCGRG	1 cut(s)	1442
BmgT120I	GGNCC	5 cut(s)	344, 407, 770, 1192, 1245
BmiI	GGNNCC	2 cut(s)	1194, 1558
BmrFI	CCNGG	1 cut(s)	1294
BmrI	ACTGGG	1 cut(s)	72
BmsI	GCATC	2 cut(s)	734, 970
BmtI	GCTAGC	1 cut(s)	1143
BmuI	ACTGGG	1 cut(s)	72
BpiI	GAAGAC	1 cut(s)	1440
BpmI	CTGGAG	1 cut(s)	1575
Bpu14I	TTCGAA	1 cut(s)	974
BsaAI	YACGTR	1 cut(s)	211
BsaI	GGTCTC	1 cut(s)	784
BsaJI	CCNNGG	5 cut(s)	264, 463, 924, 1241, 1458
BsaXI	ACNNNNNCTCC	4 cut(s)	260, 290, 792, 822
Bsc4I	CCNNNNNNNGG	2 cut(s)	1088, 1160
Bse1I	ACTGG	6 cut(s)	67, 324, 1082, 1248, 1374, 1558
Bse3DI	GCAATG	2 cut(s)	45, 667
BseBI	CCWGG	1 cut(s)	1294
BseDI	CCNNGG	5 cut(s)	264, 463, 924, 1241, 1458
BseGI	GGATG	5 cut(s)	202, 316, 1150, 1237, 1431
BseLI	CCNNNNNNNGG	2 cut(s)	1088, 1160
BseMI	GCAATG	2 cut(s)	45, 667
BseMII	CTCAG	1 cut(s)	1182
BseNI	ACTGG	6 cut(s)	67, 324, 1082, 1248, 1374, 1558
BseRI	GAGGAG	2 cut(s)	599, 694
BseXI	GCAGC	7 cut(s)	132, 262, 282, 352, 721, 1120, 1123
Bsh1285I	CGRYCG	2 cut(s)	547, 559
BshFI	GGCC	7 cut(s)	263, 408, 666, 929, 1193, 1247, 1309
BsiEI	CGRYCG	2 cut(s)	547, 559
BsiHKAI	GWGCWC	1 cut(s)	25
BsiHKCI	CYCGRG	1 cut(s)	1442
BsiSI	CCGG	2 cut(s)	165, 347
BslFI	GGGAC	1 cut(s)	919
BslI	CCNNNNNNNGG	2 cut(s)	1088, 1160
BsmAI	GTCTC	3 cut(s)	706, 784, 858
BsmFI	GGGAC	1 cut(s)	919
BsmI	GAATGC	1 cut(s)	136
BsnI	GGCC	7 cut(s)	263, 408, 666, 929, 1193, 1247, 1309
Bso31I	GGTCTC	1 cut(s)	784
BsoBI	CYCGRG	1 cut(s)	1442
Bsp119I	TTCGAA	1 cut(s)	974
Bsp1286I	GDGCHC	2 cut(s)	25, 402
Bsp143I	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
Bsp19I	CCATGG	2 cut(s)	264, 924
BspACI	CCGC	6 cut(s)	194, 219, 253, 299, 350, 1411
BspANI	GGCC	7 cut(s)	263, 408, 666, 929, 1193, 1247, 1309
BspCNI	CTCAG	1 cut(s)	1181
BspLI	GGNNCC	2 cut(s)	1194, 1558
BspMI	ACCTGC	1 cut(s)	423
BspOI	GCTAGC	1 cut(s)	1143
BspPI	GGATC	3 cut(s)	827, 1242, 1541
BspT104I	TTCGAA	1 cut(s)	974
BspTNI	GGTCTC	1 cut(s)	784
BsrDI	GCAATG	2 cut(s)	45, 667
BsrI	ACTGG	6 cut(s)	67, 324, 1082, 1248, 1374, 1558
BssECI	CCNNGG	5 cut(s)	264, 463, 924, 1241, 1458
BssMI	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
BssT1I	CCWWGG	4 cut(s)	264, 463, 924, 1241
Bst2UI	CCWGG	1 cut(s)	1294
Bst4CI	ACNGT	5 cut(s)	46, 119, 276, 557, 721
Bst6I	CTCTTC	2 cut(s)	64, 1056
BstAPI	GCANNNNNTGC	2 cut(s)	142, 1130
BstBAI	YACGTR	1 cut(s)	211
BstBI	TTCGAA	1 cut(s)	974
BstC8I	GCNNGC	3 cut(s)	714, 1141, 1290
BstDEI	CTNAG	5 cut(s)	378, 626, 1168, 1253, 1605
BstDSI	CCRYGG	2 cut(s)	264, 924
BstF5I	GGATG	5 cut(s)	202, 316, 1150, 1237, 1431
BstH2I	RGCGCY	1 cut(s)	1358
BstHHI	GCGC	1 cut(s)	1357
BstKTI	GATC	7 cut(s)	336, 835, 1181, 1237, 1334, 1468, 1549
BstMAI	GTCTC	3 cut(s)	706, 784, 858
BstMBI	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
BstMCI	CGRYCG	2 cut(s)	547, 559
BstMWI	GCNNNNNNNGC	9 cut(s)	142, 356, 365, 374, 493, 722, 731, 1130, 1363
BstNI	CCWGG	1 cut(s)	1294
BstNSI	RCATGY	2 cut(s)	491, 684
BstSCI	CCNGG	1 cut(s)	1292
BstV1I	GCAGC	7 cut(s)	132, 262, 282, 352, 721, 1120, 1123
BstV2I	GAAGAC	1 cut(s)	1440
BstX2I	RGATCY	2 cut(s)	1178, 1546
BstXI	CCANNNNNNTGG	1 cut(s)	844
BstYI	RGATCY	2 cut(s)	1178, 1546
BsuRI	GGCC	7 cut(s)	263, 408, 666, 929, 1193, 1247, 1309
BtgI	CCRYGG	2 cut(s)	264, 924
BtsCI	GGATG	5 cut(s)	202, 316, 1150, 1237, 1431
BtsI	GCAGTG	1 cut(s)	159
BtsIMutI	CAGTG	2 cut(s)	60, 159
BveI	ACCTGC	1 cut(s)	423
Cac8I	GCNNGC	3 cut(s)	714, 1141, 1290
CaiI	CAGNNNCTG	1 cut(s)	734
CfoI	GCGC	1 cut(s)	1357
Cfr13I	GGNCC	5 cut(s)	344, 407, 770, 1192, 1245
Csp6I	GTAC	3 cut(s)	317, 1148, 1165
CviQI	GTAC	3 cut(s)	317, 1148, 1165
DdeI	CTNAG	5 cut(s)	378, 626, 1168, 1253, 1605
DpnI	GATC	7 cut(s)	335, 834, 1180, 1236, 1333, 1467, 1548
DpnII	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
EaeI	YGGCCR	3 cut(s)	664, 927, 1307
Eam1104I	CTCTTC	2 cut(s)	64, 1056
EarI	CTCTTC	2 cut(s)	64, 1056
Ecl136II	GAGCTC	1 cut(s)	23
Eco130I	CCWWGG	4 cut(s)	264, 463, 924, 1241
Eco24I	GRGCYC	2 cut(s)	25, 402
Eco31I	GGTCTC	1 cut(s)	784
Eco47I	GGWCC	2 cut(s)	344, 770
Eco47III	AGCGCT	1 cut(s)	1356
Eco53kI	GAGCTC	1 cut(s)	23
Eco57I	CTGAAG	1 cut(s)	723
Eco88I	CYCGRG	1 cut(s)	1442
EcoICRI	GAGCTC	1 cut(s)	23
EcoO109I	RGGNCCY	1 cut(s)	1192
EcoRI	GAATTC	3 cut(s)	452, 1038, 1594
EcoRII	CCWGG	1 cut(s)	1292
EcoT14I	CCWWGG	4 cut(s)	264, 463, 924, 1241
EcoT38I	GRGCYC	2 cut(s)	25, 402
ErhI	CCWWGG	4 cut(s)	264, 463, 924, 1241
FalI	AAGNNNNNCTT	2 cut(s)	173, 205
FaqI	GGGAC	1 cut(s)	919
FauI	CCCGC	1 cut(s)	343
FauNDI	CATATG	1 cut(s)	829
Fnu4HI	GCNGC	8 cut(s)	146, 251, 296, 299, 366, 735, 1134, 1137
FokI	GGATG	5 cut(s)	209, 323, 1137, 1224, 1438
FriOI	GRGCYC	2 cut(s)	25, 402
Fsp4HI	GCNGC	8 cut(s)	146, 251, 296, 299, 366, 735, 1134, 1137
FspBI	CTAG	5 cut(s)	470, 708, 1140, 1242, 1352
GlaI	GCGC	1 cut(s)	1356
GluI	GCNGC	8 cut(s)	146, 251, 296, 299, 366, 735, 1134, 1137
GsuI	CTGGAG	1 cut(s)	1575
HaeII	RGCGCY	1 cut(s)	1358
HaeIII	GGCC	7 cut(s)	263, 408, 666, 929, 1193, 1247, 1309
HapII	CCGG	2 cut(s)	165, 347
HhaI	GCGC	1 cut(s)	1357
Hin6I	GCGC	1 cut(s)	1355
HinP1I	GCGC	1 cut(s)	1355
HindIII	AAGCTT	2 cut(s)	99, 746
HinfI	GANTC	4 cut(s)	15, 371, 608, 1078
HpaII	CCGG	2 cut(s)	165, 347
HphI	GGTGA	1 cut(s)	343
Hpy188I	TCNGA	6 cut(s)	20, 27, 229, 1189, 1275, 1546
Hpy188III	TCNNGA	2 cut(s)	515, 729
Hpy99I	CGWCG	1 cut(s)	290
HpyAV	CCTTC	6 cut(s)	179, 208, 467, 591, 647, 1414
HpyCH4III	ACNGT	5 cut(s)	46, 119, 276, 557, 721
HpyCH4IV	ACGT	1 cut(s)	210
HpyCH4V	TGCA	8 cut(s)	9, 148, 250, 725, 754, 1217, 1288, 1366
HpyF10VI	GCNNNNNNNGC	9 cut(s)	142, 356, 365, 374, 493, 722, 731, 1130, 1363
HpyF3I	CTNAG	5 cut(s)	378, 626, 1168, 1253, 1605
HpySE526I	ACGT	1 cut(s)	210
HspAI	GCGC	1 cut(s)	1355
Kzo9I	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
LmnI	GCTCC	6 cut(s)	20, 229, 582, 586, 731, 1556
Lsp1109I	GCAGC	7 cut(s)	132, 262, 282, 352, 721, 1120, 1123
LweI	GCATC	2 cut(s)	734, 970
MaeI	CTAG	5 cut(s)	470, 708, 1140, 1242, 1352
MaeII	ACGT	1 cut(s)	210
MaeIII	GTNAC	1 cut(s)	128
MalI	GATC	7 cut(s)	335, 834, 1180, 1236, 1333, 1467, 1548
MboI	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
MboII	GAAGA	9 cut(s)	81, 215, 458, 1015, 1073, 1330, 1387, 1399, 1440
MflI	RGATCY	2 cut(s)	1178, 1546
MhlI	GDGCHC	2 cut(s)	25, 402
MlsI	TGGCCA	3 cut(s)	666, 929, 1309
MluCI	AATT	5 cut(s)	452, 571, 1038, 1117, 1594
MluNI	TGGCCA	3 cut(s)	666, 929, 1309
MlyI	GAGTC	2 cut(s)	380, 617
MmeI	TCCRAC	2 cut(s)	207, 1167
Mox20I	TGGCCA	3 cut(s)	666, 929, 1309
MroXI	GAANNNNTTC	1 cut(s)	1598
MscI	TGGCCA	3 cut(s)	666, 929, 1309
MseI	TTAA	1 cut(s)	1025
MslI	CAYNNNNRTG	2 cut(s)	506, 929
Msp20I	TGGCCA	3 cut(s)	666, 929, 1309
MspA1I	CMGCKG	1 cut(s)	253
MspI	CCGG	2 cut(s)	165, 347
MspR9I	CCNGG	1 cut(s)	1294
Mva1269I	GAATGC	1 cut(s)	136
MvaI	CCWGG	1 cut(s)	1294
MwoI	GCNNNNNNNGC	9 cut(s)	142, 356, 365, 374, 493, 722, 731, 1130, 1363
NcoI	CCATGG	2 cut(s)	264, 924
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
NheI	GCTAGC	1 cut(s)	1139
NlaIV	GGNNCC	2 cut(s)	1194, 1558
NmeAIII	GCCGAG	2 cut(s)	394, 1439
NspI	RCATGY	2 cut(s)	491, 684
NspV	TTCGAA	1 cut(s)	974
OliI	CACNNNNGTG	1 cut(s)	506
PcsI	WCGNNNNNNNCGW	1 cut(s)	565
PctI	GAATGC	1 cut(s)	136
PdmI	GAANNNNTTC	1 cut(s)	1598
PfeI	GAWTC	2 cut(s)	15, 1078
PflFI	GACNNNGTC	1 cut(s)	46
PkrI	GCNGC	8 cut(s)	147, 252, 297, 300, 367, 736, 1135, 1138
PleI	GAGTC	2 cut(s)	379, 616
PpsI	GAGTC	2 cut(s)	379, 616
Ppu21I	YACGTR	1 cut(s)	211
Psp124BI	GAGCTC	1 cut(s)	25
Psp6I	CCWGG	1 cut(s)	1292
PspGI	CCWGG	1 cut(s)	1292
PspN4I	GGNNCC	2 cut(s)	1194, 1558
PspPI	GGNCC	5 cut(s)	344, 407, 770, 1192, 1245
PstNI	CAGNNNCTG	1 cut(s)	734
PsuI	RGATCY	2 cut(s)	1178, 1546
PsyI	GACNNNGTC	1 cut(s)	46
RsaI	GTAC	3 cut(s)	318, 1149, 1166
RsaNI	GTAC	3 cut(s)	317, 1148, 1165
RseI	CAYNNNNRTG	2 cut(s)	506, 929
SacI	GAGCTC	1 cut(s)	25
SaqAI	TTAA	1 cut(s)	1025
SatI	GCNGC	8 cut(s)	146, 251, 296, 299, 366, 735, 1134, 1137
Sau3AI	GATC	7 cut(s)	333, 832, 1178, 1234, 1331, 1465, 1546
Sau96I	GGNCC	5 cut(s)	344, 407, 770, 1192, 1245
SchI	GAGTC	2 cut(s)	380, 617
ScrFI	CCNGG	1 cut(s)	1294
SduI	GDGCHC	2 cut(s)	25, 402
SfaNI	GCATC	2 cut(s)	734, 970
SfuI	TTCGAA	1 cut(s)	974
SinI	GGWCC	2 cut(s)	344, 770
SmiMI	CAYNNNNRTG	2 cut(s)	506, 929
Sse9I	AATT	5 cut(s)	452, 571, 1038, 1117, 1594
SsiI	CCGC	6 cut(s)	194, 219, 253, 299, 350, 1411
SspI	AATATT	1 cut(s)	948
SspMI	CTAG	5 cut(s)	470, 708, 1140, 1242, 1352
SstI	GAGCTC	1 cut(s)	25
StyD4I	CCNGG	1 cut(s)	1292
StyI	CCWWGG	4 cut(s)	264, 463, 924, 1241
TaaI	ACNGT	5 cut(s)	46, 119, 276, 557, 721
TaiI	ACGT	1 cut(s)	213
TaqI	TCGA	4 cut(s)	288, 568, 974, 1398
TaqII	GACCGA	1 cut(s)	533
TasI	AATT	5 cut(s)	452, 571, 1038, 1117, 1594
TatI	WGTACW	1 cut(s)	316
TauI	GCSGC	1 cut(s)	301
TfiI	GAWTC	2 cut(s)	15, 1078
Tru1I	TTAA	1 cut(s)	1025
Tru9I	TTAA	1 cut(s)	1025
TscAI	CASTG	2 cut(s)	67, 166
TseI	GCWGC	7 cut(s)	145, 250, 295, 365, 734, 1133, 1136
TspDTI	ATGAA	5 cut(s)	465, 609, 841, 876, 1074
TspRI	CASTG	2 cut(s)	67, 166
Tth111I	GACNNNGTC	1 cut(s)	46
VpaK11BI	GGWCC	2 cut(s)	344, 770
XapI	RAATTY	5 cut(s)	452, 571, 1038, 1117, 1594
XceI	RCATGY	2 cut(s)	491, 684
XcmI	CCANNNNNNNNNTGG	1 cut(s)	794
XmaJI	CCTAGG	1 cut(s)	1241
XmnI	GAANNNNTTC	1 cut(s)	1598
XspI	CTAG	5 cut(s)	470, 708, 1140, 1242, 1352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.