Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003296

Physical Location & Seq

Genomic Coordinates Forward (+)

6619484 .. 6621412

Gene Structure 1929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0082300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGGAGACGATCAAAGCAGAGAGCCACAACCAGAAAAAGCTTCTTCACATCGCCATGTTCCCATGGCTAGCCTACGGCCATCTCATGCCGTTTCTTCAACTGTCCAAGTTCCTAGCTCAAAAGGGTCATCGCATATCCTTCATCTCCACCCCTAAAAACCTCCACCGCCTCCCAACCTCCTCATCCTTATCCCCACTCATCAAACTCATCGAGCTTCCAATGCCCGTCGTCGAAGGCCTTCCGGAGTCGGCGGAGTCCACCTCCGACGTGCCCATCAACAAAGTCCCGTACCTGAAAAAAGCCTACGACAAGCTCGAGCTCCCTCTCACGCATTGCCTCGAAGACTTGGAGGTGAACTGGATCGTCATCGATTTCGCGTCCCACTGGCTTCCCCGAGTCGCGACTCGGCTGGGGATCAACTCGGTTTACTTCACCATTTTCAATGCTACCACCATGGCCTTCTTGGGCCCGCCGTCAGAGATACTCGGTGGCGAACGCCAGCAGCCTGAGGACTTCACTGTAGTCCCCAAATGGATCGACTTCCCTAATTACGACGTCAAGTTTAAGCTGCACGAGGTGATCACTCACTGGGAGTGCATGGAGGAAGAGGTCTCCGATTTCCAGAGGATCGCTGCCGGAATTCAGGGTTGCGACTTTGTGGCCACCAGGACCTGTCCCGAGTTTGATGCTGACTCACTGAGTTTGTTGAATAAATTGTACGGCAAACCTGTGGTTCCACTCGGGTTGTTGCCGCCGCCGGTGTTAACGGACGCCGACGGTGCTGACGAATCAGAAGGTGACAAGTGGAGAAGTTTGAGAGAGTGGCTTGATAACAAGAAAGAGAAGTCGGTGGTTTACATTGCACTGGGGACCGAGGTCACTCTCAGTCGAGAAGCGATGCACGAGTTGGCACGCGGGATAGAGAAATCCGGGTTGTGTTTTATTTGGGTGTTAGGCAATCGTCAATTAGTCGCCGAAGGACCGGATATGATTCCGGTCGGGTTTGAGACCCGAGTTGGGGACCGGGGTTTGGTGTCCAGGGGTTGGGCTCCACAACTTAGGGTCTTGGCCCACTCGTCGATTGGGGGTTTCTTGACTCATTGTGGTTGGAGTTCAGTGATTGAGGCACTTGAGTTTGGTCGGGTCTTGATTTTATTTTCTGGGGCGAGTTCAGACCAAGGGTTGATTGCGAGACTGATGCACAACAAGCGATTCGGGTTGGAAATACCAAGAGATGATCGAGATGGATCATTTAGTAGTGAAGCAGTGGCCGAGTCGATTAGACGAGTCATGGTGGACAGAGAAGGTGAGACACTCAGGAAAAATGCTTGGGCCATGAGAGAAATTTTCGGTAACTTGAACTTGAACAACAAGTATCTAGATGAGTTCGCTAAGGTCCTCGAAACATGGCCGACTTCAACATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0030054 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048285 GO:0051225 GO:0055044 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

475

Amino Acids

53.43

Weight (kDa)

5.7

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	272 - 409	9.2e-10	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT5G66310 AT5G66310 AT5G66310
fragaria_vesca	FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070
malus_domestica	MD00G1176100.v1.1 MD02G1110400.v1.1 MD02G1135300.v1.1 MD15G1248100.v1.1
prunus_persica	Prupe.7G166000_v2.0.a1 Prupe.7G166000_v2.0.a1
pyrus_communis	pycom02g10640 pycom15g21790
rosa_chinensis	RchiOBHm_Chr2g0099691
rosa_laevigata	RLG00000016906
rosa_multiflora	Rmu_sc0004019.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142830
rosa_rugosa	Rorug02G0082100 Rorug02G0082200 Rorug02G0082300 Rorug02G0082400
rosa_samantha	Rh2AG131700 Rh2BG135000 Rh2CG135900 Rh2DG136400
rosa_wichuraiana	Rw2G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	558
AccB7I	CCANNNNNTGG	1 cut(s)	1044
AccII	CGCG	3 cut(s)	377, 401, 915
AccIII	TCCGGA	1 cut(s)	241
AciI	CCGC	6 cut(s)	166, 251, 470, 752, 755, 915
AclWI	GGATC	5 cut(s)	368, 422, 542, 635, 1255
AcoI	YGGCCR	4 cut(s)	76, 660, 1269, 1409
AcsI	RAATTY	2 cut(s)	639, 1344
AcyI	GRCGYC	2 cut(s)	555, 771
AdeI	CACNNNGTG	1 cut(s)	577
AfaI	GTAC	2 cut(s)	290, 719
AfiI	CCNNNNNNNGG	4 cut(s)	1017, 1018, 1030, 1044
AgsI	TTSAA	6 cut(s)	98, 442, 709, 1360, 1366, 1419
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	2 cut(s)	665, 1037
AluBI	AGCT	6 cut(s)	40, 116, 214, 313, 319, 568
AluI	AGCT	6 cut(s)	40, 116, 214, 313, 319, 568
Alw21I	GWGCWC	1 cut(s)	321
Alw26I	GTCTC	4 cut(s)	616, 1001, 1186, 1304
AlwI	GGATC	5 cut(s)	368, 422, 542, 635, 1255
AlwNI	CAGNNNCTG	1 cut(s)	672
Ama87I	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
Aor13HI	TCCGGA	1 cut(s)	241
AoxI	GGCC	9 cut(s)	76, 235, 456, 466, 660, 1068, 1269, 1332, 1409
ApaI	GGGCCC	1 cut(s)	470
ApeKI	GCWGC	3 cut(s)	502, 568, 632
ApoI	RAATTY	2 cut(s)	639, 1344
Asp700I	GAANNNNTTC	1 cut(s)	237
AspS9I	GGNCC	9 cut(s)	466, 467, 669, 870, 980, 1021, 1069, 1332, 1396
AsuC2I	CCSGG	2 cut(s)	931, 1025
AsuHPI	GGTGA	5 cut(s)	364, 424, 589, 809, 1319
AsuNHI	GCTAGC	1 cut(s)	67
AvaI	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
AvaII	GGWCC	5 cut(s)	669, 870, 980, 1021, 1396
AxyI	CCTNAGG	1 cut(s)	507
BaeGI	GKGCMC	2 cut(s)	273, 470
BalI	TGGCCA	1 cut(s)	662
BanII	GRGCYC	3 cut(s)	321, 470, 1051
BauI	CACGAG	2 cut(s)	572, 902
BbsI	GAAGAC	1 cut(s)	348
Bbv12I	GWGCWC	1 cut(s)	321
BbvI	GCAGC	3 cut(s)	514, 555, 619
BccI	CCATC	3 cut(s)	87, 281, 1238
BceAI	ACGGC	4 cut(s)	73, 91, 457, 736
BcgI	CGANNNNNNTGC	4 cut(s)	668, 702, 1180, 1214
BciT130I	CCWGG	2 cut(s)	667, 1039
BclI	TGATCA	1 cut(s)	579
BcnI	CCSGG	2 cut(s)	931, 1025
BcoDI	GTCTC	4 cut(s)	616, 1001, 1186, 1304
BfaI	CTAG	3 cut(s)	68, 113, 1379
BfmI	CTRYAG	1 cut(s)	519
BisI	GCNGC	5 cut(s)	503, 569, 633, 752, 755
BlsI	GCNGC	5 cut(s)	504, 570, 634, 753, 756
Bme1390I	CCNGG	4 cut(s)	667, 931, 1025, 1039
Bme18I	GGWCC	5 cut(s)	669, 870, 980, 1021, 1396
BmeT110I	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	9 cut(s)	466, 467, 669, 870, 980, 1021, 1069, 1332, 1396
BmiI	GGNNCC	5 cut(s)	468, 735, 871, 1022, 1050
BmrFI	CCNGG	4 cut(s)	667, 931, 1025, 1039
BmrI	ACTGGG	2 cut(s)	598, 875
BmsI	GCATC	3 cut(s)	676, 888, 1188
BmtI	GCTAGC	1 cut(s)	71
BmuI	ACTGGG	2 cut(s)	598, 875
BoxI	GACNNNNGTC	1 cut(s)	875
BpiI	GAAGAC	1 cut(s)	348
BplI	GAGNNNNNCTC	2 cut(s)	245, 277
Bpu10I	CCTNAGC	1 cut(s)	1392
BpuEI	CTTGAG	1 cut(s)	1151
BpuMI	CCSGG	2 cut(s)	931, 1025
Bsa29I	ATCGAT	1 cut(s)	369
BsaBI	GATNNNNATC	1 cut(s)	365
BsaHI	GRCGYC	2 cut(s)	555, 771
BsaI	GGTCTC	2 cut(s)	616, 1001
BsaJI	CCNNGG	6 cut(s)	62, 453, 873, 1024, 1038, 1177
BsaWI	WCCGGW	3 cut(s)	241, 982, 994
Bsc4I	CCNNNNNNNGG	4 cut(s)	1017, 1018, 1030, 1044
Bse118I	RCCGGY	1 cut(s)	757
Bse1I	ACTGG	4 cut(s)	362, 389, 593, 870
Bse21I	CCTNAGG	1 cut(s)	507
Bse3DI	GCAATG	2 cut(s)	331, 858
Bse8I	GATNNNNATC	1 cut(s)	365
BseAI	TCCGGA	1 cut(s)	241
BseBI	CCWGG	2 cut(s)	667, 1039
BseCI	ATCGAT	1 cut(s)	369
BseDI	CCNNGG	6 cut(s)	62, 453, 873, 1024, 1038, 1177
BseGI	GGATG	1 cut(s)	182
BseJI	GATNNNNATC	1 cut(s)	365
BseLI	CCNNNNNNNGG	4 cut(s)	1017, 1018, 1030, 1044
BseMI	GCAATG	2 cut(s)	331, 858
BseMII	CTCAG	4 cut(s)	498, 689, 898, 1330
BseNI	ACTGG	4 cut(s)	362, 389, 593, 870
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	2 cut(s)	273, 470
BseXI	GCAGC	3 cut(s)	514, 555, 619
BseYI	CCCAGC	1 cut(s)	409
BsgI	GTGCAG	1 cut(s)	554
Bsh1236I	CGCG	3 cut(s)	377, 401, 915
Bsh1285I	CGRYCG	1 cut(s)	999
BshFI	GGCC	9 cut(s)	78, 237, 458, 468, 662, 1070, 1271, 1334, 1411
BshVI	ATCGAT	1 cut(s)	369
BsiEI	CGRYCG	1 cut(s)	999
BsiHKAI	GWGCWC	1 cut(s)	321
BsiHKCI	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
BsiSI	CCGG	7 cut(s)	242, 636, 758, 930, 983, 995, 1024
BslFI	GGGAC	6 cut(s)	269, 364, 509, 660, 883, 1034
BslI	CCNNNNNNNGG	4 cut(s)	1017, 1018, 1030, 1044
BsmAI	GTCTC	4 cut(s)	616, 1001, 1186, 1304
BsmFI	GGGAC	6 cut(s)	269, 364, 509, 660, 883, 1034
BsnI	GGCC	9 cut(s)	78, 237, 458, 468, 662, 1070, 1271, 1334, 1411
Bso31I	GGTCTC	2 cut(s)	616, 1001
BsoBI	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
Bsp120I	GGGCCC	1 cut(s)	466
Bsp1286I	GDGCHC	4 cut(s)	273, 321, 470, 1051
Bsp13I	TCCGGA	1 cut(s)	241
Bsp143I	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
Bsp19I	CCATGG	2 cut(s)	62, 453
Bsp68I	TCGCGA	1 cut(s)	401
BspACI	CCGC	6 cut(s)	166, 251, 470, 752, 755, 915
BspANI	GGCC	9 cut(s)	78, 237, 458, 468, 662, 1070, 1271, 1334, 1411
BspCNI	CTCAG	4 cut(s)	499, 690, 897, 1329
BspDI	ATCGAT	1 cut(s)	369
BspEI	TCCGGA	1 cut(s)	241
BspFNI	CGCG	3 cut(s)	377, 401, 915
BspLI	GGNNCC	5 cut(s)	468, 735, 871, 1022, 1050
BspOI	GCTAGC	1 cut(s)	71
BspPI	GGATC	5 cut(s)	368, 422, 542, 635, 1255
BspTNI	GGTCTC	2 cut(s)	616, 1001
BsrDI	GCAATG	2 cut(s)	331, 858
BsrFI	RCCGGY	1 cut(s)	757
BsrI	ACTGG	4 cut(s)	362, 389, 593, 870
BssAI	RCCGGY	1 cut(s)	757
BssECI	CCNNGG	6 cut(s)	62, 453, 873, 1024, 1038, 1177
BssMI	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
BssNI	GRCGYC	2 cut(s)	555, 771
BssSI	CACGAG	2 cut(s)	572, 902
BssT1I	CCWWGG	3 cut(s)	62, 453, 1177
Bst2BI	CACGAG	2 cut(s)	572, 902
Bst2UI	CCWGG	2 cut(s)	667, 1039
Bst4CI	ACNGT	3 cut(s)	102, 520, 779
Bst6I	CTCTTC	1 cut(s)	600
BstACI	GRCGYC	2 cut(s)	555, 771
BstC8I	GCNNGC	4 cut(s)	69, 470, 500, 913
BstDEI	CTNAG	6 cut(s)	507, 698, 884, 1058, 1316, 1392
BstDSI	CCRYGG	2 cut(s)	62, 453
BstF5I	GGATG	1 cut(s)	182
BstFNI	CGCG	3 cut(s)	377, 401, 915
BstKTI	GATC	8 cut(s)	12, 363, 417, 537, 582, 630, 1240, 1250
BstMAI	GTCTC	4 cut(s)	616, 1001, 1186, 1304
BstMBI	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
BstMCI	CGRYCG	1 cut(s)	999
BstMWI	GCNNNNNNNGC	3 cut(s)	220, 779, 1207
BstNI	CCWGG	2 cut(s)	667, 1039
BstPAI	GACNNNNGTC	1 cut(s)	875
BstSCI	CCNGG	4 cut(s)	665, 929, 1023, 1037
BstSFI	CTRYAG	1 cut(s)	519
BstSLI	GKGCMC	2 cut(s)	273, 470
BstUI	CGCG	3 cut(s)	377, 401, 915
BstV1I	GCAGC	3 cut(s)	514, 555, 619
BstV2I	GAAGAC	1 cut(s)	348
Bsu15I	ATCGAT	1 cut(s)	369
Bsu36I	CCTNAGG	1 cut(s)	507
BsuRI	GGCC	9 cut(s)	78, 237, 458, 468, 662, 1070, 1271, 1334, 1411
BsuTUI	ATCGAT	1 cut(s)	369
BtgI	CCRYGG	2 cut(s)	62, 453
BtgZI	GCGATG	3 cut(s)	34, 113, 911
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	1 cut(s)	182
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	7 cut(s)	382, 516, 586, 695, 863, 1122, 1272
BtuMI	TCGCGA	1 cut(s)	401
Cac8I	GCNNGC	4 cut(s)	69, 470, 500, 913
CaiI	CAGNNNCTG	1 cut(s)	672
Cfr10I	RCCGGY	1 cut(s)	757
Cfr13I	GGNCC	9 cut(s)	466, 467, 669, 870, 980, 1021, 1069, 1332, 1396
ClaI	ATCGAT	1 cut(s)	369
CseI	GACGC	2 cut(s)	366, 779
Csp6I	GTAC	2 cut(s)	289, 718
CspCI	CAANNNNNGTGG	2 cut(s)	726, 761
CviAII	CATG	8 cut(s)	55, 63, 85, 454, 598, 1291, 1336, 1407
CviQI	GTAC	2 cut(s)	289, 718
DdeI	CTNAG	6 cut(s)	507, 698, 884, 1058, 1316, 1392
DpnI	GATC	8 cut(s)	11, 362, 416, 536, 581, 629, 1239, 1249
DpnII	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
DraIII	CACNNNGTG	1 cut(s)	577
EaeI	YGGCCR	4 cut(s)	76, 660, 1269, 1409
Eam1104I	CTCTTC	1 cut(s)	600
EarI	CTCTTC	1 cut(s)	600
EciI	GGCGGA	1 cut(s)	266
Ecl136II	GAGCTC	1 cut(s)	319
Eco130I	CCWWGG	3 cut(s)	62, 453, 1177
Eco147I	AGGCCT	1 cut(s)	237
Eco24I	GRGCYC	3 cut(s)	321, 470, 1051
Eco31I	GGTCTC	2 cut(s)	616, 1001
Eco47I	GGWCC	5 cut(s)	669, 870, 980, 1021, 1396
Eco53kI	GAGCTC	1 cut(s)	319
Eco81I	CCTNAGG	1 cut(s)	507
Eco88I	CYCGRG	5 cut(s)	314, 393, 677, 740, 1011
EcoICRI	GAGCTC	1 cut(s)	319
EcoO109I	RGGNCCY	2 cut(s)	669, 1396
EcoRI	GAATTC	1 cut(s)	639
EcoRII	CCWGG	2 cut(s)	665, 1037
EcoT14I	CCWWGG	3 cut(s)	62, 453, 1177
EcoT38I	GRGCYC	3 cut(s)	321, 470, 1051
ErhI	CCWWGG	3 cut(s)	62, 453, 1177
FaeI	CATG	8 cut(s)	58, 66, 88, 457, 601, 1294, 1339, 1410
FaqI	GGGAC	6 cut(s)	269, 364, 509, 660, 883, 1034
FatI	CATG	8 cut(s)	54, 62, 84, 453, 597, 1290, 1335, 1406
FauI	CCCGC	2 cut(s)	477, 908
FbaI	TGATCA	1 cut(s)	579
Fnu4HI	GCNGC	5 cut(s)	503, 569, 633, 752, 755
FokI	GGATG	1 cut(s)	169
FriOI	GRGCYC	3 cut(s)	321, 470, 1051
Fsp4HI	GCNGC	5 cut(s)	503, 569, 633, 752, 755
FspBI	CTAG	3 cut(s)	68, 113, 1379
GluI	GCNGC	5 cut(s)	503, 569, 633, 752, 755
GsaI	CCCAGC	1 cut(s)	413
HaeIII	GGCC	9 cut(s)	78, 237, 458, 468, 662, 1070, 1271, 1334, 1411
HapII	CCGG	7 cut(s)	242, 636, 758, 930, 983, 995, 1024
HgaI	GACGC	2 cut(s)	366, 779
Hin1I	GRCGYC	2 cut(s)	555, 771
Hin1II	CATG	8 cut(s)	58, 66, 88, 457, 601, 1294, 1339, 1410
HincII	GTYRAC	1 cut(s)	765
HindII	GTYRAC	1 cut(s)	765
HindIII	AAGCTT	1 cut(s)	38
HpaI	GTTAAC	1 cut(s)	765
HpaII	CCGG	7 cut(s)	242, 636, 758, 930, 983, 995, 1024
HphI	GGTGA	5 cut(s)	364, 424, 589, 809, 1319
Hpy166II	GTNNAC	6 cut(s)	258, 355, 427, 765, 856, 1297
Hpy188I	TCNGA	5 cut(s)	265, 478, 616, 793, 1174
Hpy8I	GTNNAC	6 cut(s)	258, 355, 427, 765, 856, 1297
Hpy99I	CGWCG	6 cut(s)	230, 233, 269, 557, 779, 1081
HpyAV	CCTTC	7 cut(s)	148, 227, 248, 469, 788, 971, 1298
HpyCH4III	ACNGT	3 cut(s)	102, 520, 779
HpyCH4IV	ACGT	2 cut(s)	267, 555
HpyCH4V	TGCA	5 cut(s)	571, 597, 863, 901, 1201
HpyF10VI	GCNNNNNNNGC	3 cut(s)	220, 779, 1207
HpyF3I	CTNAG	6 cut(s)	507, 698, 884, 1058, 1316, 1392
HpySE526I	ACGT	2 cut(s)	267, 555
Hsp92I	GRCGYC	2 cut(s)	555, 771
Hsp92II	CATG	8 cut(s)	58, 66, 88, 457, 601, 1294, 1339, 1410
Kpn2I	TCCGGA	1 cut(s)	241
Ksp22I	TGATCA	1 cut(s)	579
KspAI	GTTAAC	1 cut(s)	765
Kzo9I	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
LmnI	GCTCC	2 cut(s)	324, 1054
Lsp1109I	GCAGC	3 cut(s)	514, 555, 619
LweI	GCATC	3 cut(s)	676, 888, 1188
MaeI	CTAG	3 cut(s)	68, 113, 1379
MaeII	ACGT	2 cut(s)	267, 555
MaeIII	GTNAC	3 cut(s)	797, 877, 1352
MalI	GATC	8 cut(s)	11, 362, 416, 536, 581, 629, 1239, 1249
MboI	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
MboII	GAAGA	4 cut(s)	35, 86, 353, 617
MhlI	GDGCHC	4 cut(s)	273, 321, 470, 1051
MlsI	TGGCCA	1 cut(s)	662
MluCI	AATT	5 cut(s)	547, 639, 713, 965, 1344
MluNI	TGGCCA	1 cut(s)	662
MlyI	GAGTC	8 cut(s)	254, 263, 397, 405, 686, 1090, 1283, 1296
MmeI	TCCRAC	3 cut(s)	288, 1088, 1200
Mox20I	TGGCCA	1 cut(s)	662
MroI	TCCGGA	1 cut(s)	241
MroXI	GAANNNNTTC	1 cut(s)	237
MscI	TGGCCA	1 cut(s)	662
MseI	TTAA	3 cut(s)	564, 764, 1426
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	662
MspI	CCGG	7 cut(s)	242, 636, 758, 930, 983, 995, 1024
MspR9I	CCNGG	4 cut(s)	667, 931, 1025, 1039
MvaI	CCWGG	2 cut(s)	667, 1039
MvnI	CGCG	3 cut(s)	377, 401, 915
MwoI	GCNNNNNNNGC	3 cut(s)	220, 779, 1207
NciI	CCSGG	2 cut(s)	931, 1025
NcoI	CCATGG	2 cut(s)	62, 453
NdeII	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
NheI	GCTAGC	1 cut(s)	67
NlaIII	CATG	8 cut(s)	58, 66, 88, 457, 601, 1294, 1339, 1410
NlaIV	GGNNCC	5 cut(s)	468, 735, 871, 1022, 1050
NmeAIII	GCCGAG	2 cut(s)	385, 1297
NmuCI	GTSAC	2 cut(s)	797, 877
NruI	TCGCGA	1 cut(s)	401
PaeR7I	CTCGAG	1 cut(s)	314
PceI	AGGCCT	1 cut(s)	237
PcsI	WCGNNNNNNNCGW	2 cut(s)	312, 783
PdmI	GAANNNNTTC	1 cut(s)	237
PfeI	GAWTC	3 cut(s)	788, 991, 1212
PflMI	CCANNNNNTGG	1 cut(s)	1044
PkrI	GCNGC	5 cut(s)	504, 570, 634, 753, 756
PleI	GAGTC	8 cut(s)	253, 262, 397, 404, 686, 1090, 1282, 1295
PpsI	GAGTC	8 cut(s)	253, 262, 397, 404, 686, 1090, 1282, 1295
PpuMI	RGGWCCY	2 cut(s)	669, 1396
PshAI	GACNNNNGTC	1 cut(s)	875
Psp124BI	GAGCTC	1 cut(s)	321
Psp5II	RGGWCCY	2 cut(s)	669, 1396
Psp6I	CCWGG	2 cut(s)	665, 1037
PspFI	CCCAGC	1 cut(s)	409
PspGI	CCWGG	2 cut(s)	665, 1037
PspN4I	GGNNCC	5 cut(s)	468, 735, 871, 1022, 1050
PspOMI	GGGCCC	1 cut(s)	466
PspPI	GGNCC	9 cut(s)	466, 467, 669, 870, 980, 1021, 1069, 1332, 1396
PspPPI	RGGWCCY	2 cut(s)	669, 1396
PspXI	VCTCGAGB	1 cut(s)	314
PstNI	CAGNNNCTG	1 cut(s)	672
RruI	TCGCGA	1 cut(s)	401
RsaI	GTAC	2 cut(s)	290, 719
RsaNI	GTAC	2 cut(s)	289, 718
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	321
SaqAI	TTAA	3 cut(s)	564, 764, 1426
SatI	GCNGC	5 cut(s)	503, 569, 633, 752, 755
Sau3AI	GATC	8 cut(s)	9, 360, 414, 534, 579, 627, 1237, 1247
Sau96I	GGNCC	9 cut(s)	466, 467, 669, 870, 980, 1021, 1069, 1332, 1396
SchI	GAGTC	8 cut(s)	254, 263, 397, 405, 686, 1090, 1283, 1296
ScrFI	CCNGG	4 cut(s)	667, 931, 1025, 1039
SduI	GDGCHC	4 cut(s)	273, 321, 470, 1051
SfaNI	GCATC	3 cut(s)	676, 888, 1188
SfcI	CTRYAG	1 cut(s)	519
Sfr274I	CTCGAG	1 cut(s)	314
SgrAI	CRCCGGYG	1 cut(s)	757
SinI	GGWCC	5 cut(s)	669, 870, 980, 1021, 1396
SlaI	CTCGAG	1 cut(s)	314
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	2 cut(s)	314, 1130
SmoI	CTYRAG	2 cut(s)	314, 1130
Sse9I	AATT	5 cut(s)	547, 639, 713, 965, 1344
SseBI	AGGCCT	1 cut(s)	237
SsiI	CCGC	6 cut(s)	166, 251, 470, 752, 755, 915
SspMI	CTAG	3 cut(s)	68, 113, 1379
SstI	GAGCTC	1 cut(s)	321
StuI	AGGCCT	1 cut(s)	237
StyD4I	CCNGG	4 cut(s)	665, 929, 1023, 1037
StyI	CCWWGG	3 cut(s)	62, 453, 1177
TaaI	ACNGT	3 cut(s)	102, 520, 779
TaiI	ACGT	2 cut(s)	270, 558
TaqII	GACCGA	1 cut(s)	887
TasI	AATT	5 cut(s)	547, 639, 713, 965, 1344
TauI	GCSGC	2 cut(s)	754, 757
TfiI	GAWTC	3 cut(s)	788, 991, 1212
Tru1I	TTAA	3 cut(s)	564, 764, 1426
Tru9I	TTAA	3 cut(s)	564, 764, 1426
TscAI	CASTG	7 cut(s)	389, 523, 593, 702, 870, 1122, 1272
TseFI	GTSAC	2 cut(s)	797, 877
TseI	GCWGC	3 cut(s)	502, 568, 632
Tsp45I	GTSAC	2 cut(s)	797, 877
TspDTI	ATGAA	1 cut(s)	130
TspGWI	ACGGA	1 cut(s)	782
TspRI	CASTG	7 cut(s)	389, 523, 593, 702, 870, 1122, 1272
Van91I	CCANNNNNTGG	1 cut(s)	1044
VpaK11BI	GGWCC	5 cut(s)	669, 870, 980, 1021, 1396
XapI	RAATTY	2 cut(s)	639, 1344
XbaI	TCTAGA	1 cut(s)	1378
XcmI	CCANNNNNNNNNTGG	2 cut(s)	460, 1079
XhoI	CTCGAG	1 cut(s)	314
XmnI	GAANNNNTTC	1 cut(s)	237
XspI	CTAG	3 cut(s)	68, 113, 1379
ZraI	GACGTC	1 cut(s)	556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.