Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003296

Physical Location & Seq

Genomic Coordinates Reverse (-)

12062991 .. 12070441

Gene Structure 7451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG135900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2991 bp

ATGGTGGCCATTGGTGAGGAGGAGCCAATGCAGGAGCCAGGCCACGGGGAGAGGATACTCGTTTCTGTTCGGCTGCGTCCTTTGAACGAGAAGGAGACTGCCAGGAATGATGTGTCGGATTGGGAATGTATTAATGACAACACTATCATATACAGGAACAACCTTTCCATTTCTGAGCGCTCCATGTACCCAACTGCCTACACATTCGACAGAGTATTTAGTACGGATTGCTCCACAAGGCGGGTGTATGAAGAAGGAGCCAAGAAAGTTGCTCTTTCAGTTGCCAGTGGTATAAACTCAAGTATTTTTGCATATGGACAAACAAGCAGTGGAAAGACATACACCATGAGTGGAATTACTGAGTACGCTGTTGCAGATTTATATGACTATATAGATAAGCACGAGGAGAGAGAATTTGTTTTAAAATTCTCTGCTTTGGAGATCTACAACGAATCTGTTAGGGACCTTCTTAGTGCAGATACCACTCCCCTTAGGCTTCTGGATGATCCTGAGAGAGGTACAATTGTTGAAAAACTTACAGAGGAAACTCTAAGGGACTGGAATCATTTCAGAGAACTTCTATCTGTCTGCGAAGCTCAAAGACAGATAGGAGAAACATCTTTAAATGAAGCAAGCTCCAGGTCTCATCAGATTCTCAGATTGGTAATAGAAAGTTCAGCACGTGAGTTTCTTGGCTATGACAAGTCAAGCTCCCTTACTGCTATGGTGAACTTTGTTGATCTTGCTGGAAGTGAGCGTGCATCCCAGACATTATCAGCTGGCACAAGGTTGAAAGAGGGTTGCCACATAAATCGCAGTTTACTAACTCTGGGCACTGTTATCCGTAAGCTGAGCAAGGGAAGAAATGGGCATATTCCTTACAGAGATTCAAAGCTAACCCGAATACTACAGTCCTCCTTAGGAGGAAATGCTAGAACTGCCATCATCTGTACTTTGAGTCCTGCACATAGCCATGTTGAGCAATCAAGAAACACCCTTTTGTTTGCAAGTTGTGCTAAAGAAGTGACAACAAATGCACAGGTTAATGTAGTCATGTCAGATAAAACATTGGTGAAGCATTTGCAAAAGCAATTGGCTAAATTAGAGAATGAGTTGAAATCTTCGGGATCAAAAATTGTTCCAGCTGATTCTTATACTCTACTGAGAGAAAAAGACCTTCAAATTGAAAAGCTTAAGAAAGAGGTGTCAGAGCTGACTCTGCAACGAGACCTTGCTCAATCTCAGGTTAAGGATCTGGTACGAGTGCTTGAAGATGATAAACCATCACCAGCAGATTTGGATCGTTATTACCCCAAATTGCGAGTGCGAAATTCATGGGAGAACATTGAAATTCAACCATCAGCAATACCTGTTCTGGCTGGTTCTCACCACCGCCGAGGCAGCGTTAGATCTTTTTCCACATCTCAGTATTCAGATGTAGACAGTAGGACTAGTTCTGATGATACTTTACTCCAACTTCCGGACTTTGATGACAATTTCCTGATCCCACACACGTTCTCCTCCAGCCAGTTGCCAGTTAGATTTCCTAATTCCATTGATGCCAATCTGCATCAGGAGGAGAACAAAGAACAGTCTGATGTAAATTCAGAAGATGTTTGCAAAGAAGTTCGGTGCATTGAAATGGAAGAGTCAAGCACAAACAGATATGTAGCATCAAATATATCAGATTCAAGCAGAAGCAGATACCAAAACTCAAATCTGTCATCTCCTGCAGCAAACACACCTACCTCAGGATTGACAGTGGTTGAGAATGGAGATGGCACCAATAAAGAATTGCAGTCGCCCCTATTGAACCATAAAGGTTTTGTCATTCAATCTCCTGAAAAGACATCTCAATGGCTCCGAGAGAAACAGATGTCTACCCCCTTGATCTACAAGTTAAGGCGGAGTAGAAGTTGTAAAGCAAGTCTTGTGACTACGTTCTCTTCATGTTGGCTTGAGATGGTAGAGAAGAATGAGAACACGCCTTTGATTGAGTTTGAGAAAAGTTATAATGAGAGCACACCTCCAACCGAGTTTGAGAAAAATTTTGTAGGAAGGCCCAAGGGTCTGCAAAAGAAACTTCCTTCATTCAAGTATGATGATTCTCAGTTTTCTGCAAGAACTGCAGCAGCTTCTGATGAGTGTAAACTACAGAATACCGAATCCGGAACTAATGACGAGAGTATTGAAACAAGTTCTTTAGTTGAAGAAACAAATGAAGTGACTACAACTAATGAAAAGGCTACTGAAAGCAGTTCTCTAGTTGAAGGAACAAAGGAAATGGTGGACACCCAGTGCATTACTCAACTTGCTGATTCTATGGTACCGGAGACAGATACAAAGCCTATACCAGAGACAGGTTTAAGGCCCAATCCATCTACAAGGGATGTGAAAGATGTTGGCTTGGACCCAATGCCTATGGATGAGGAAAGCGATTCAATGTGGCCATCAGAATTCAAGAGGCTGCAAAGAGAGATTGTTGAACTTTGGCATGCTTGCAATGTGTCATTGGTTCACAGGACTTACTTCTTCCTGCTATTTAAAGGTGATCCAAGTGATTCTATATACATGGAGGTTGAGCTCAGGAGATTGTCCTTCCTCAAAGGCACATTTCTTAAGGGAGATCAAGCTTTGGAAGATGGTCTAACACCCGCTTCAAGCCTGAGGGCTTTATGCAGTGAGAGACACATGCTGAGCAAGCAAATGAGCAAGAGGCTCTCCAAAGATGAAAGAGATAACCTCTACCTGAAGTGGGGTATTGGGCTAAACTCAAAGAATAGGAGGTTGCAATTGGCGAACCGCCTGTGGAGTGACACAAACAACATGGATCACATCGCAGATAGTGCCAATGTTGTTGCGAAGCTGGTTGGTTCAGTAGAGCCAGAGCAGGCTTTCAAGGAGATGTTTGGACTCAGATTTACACCTCGAGACACAATTACGAGGCGGAGATCTTACCGATGGACAGAAAGTTTGAAGCATCTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0030054 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048285 GO:0051225 GO:0055044 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

996

Amino Acids

112.57

Weight (kDa)

5.67

Isoelectric Point (pI)

56.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	23 - 157	4.4e-20	Microtubule binding
Kinesin	PF00225	24 - 342	2.8e-99	Kinesin motor domain
DUF3490	PF11995	819 - 977	4.7e-74	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT5G66310 AT5G66310 AT5G66310
fragaria_vesca	FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070
malus_domestica	MD00G1176100.v1.1 MD02G1110400.v1.1 MD02G1135300.v1.1 MD15G1248100.v1.1
prunus_persica	Prupe.7G166000_v2.0.a1 Prupe.7G166000_v2.0.a1
pyrus_communis	pycom02g10640 pycom15g21790
rosa_chinensis	RchiOBHm_Chr2g0099691
rosa_laevigata	RLG00000016906
rosa_multiflora	Rmu_sc0004019.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142830
rosa_rugosa	Rorug02G0082100 Rorug02G0082200 Rorug02G0082300 Rorug02G0082400
rosa_samantha	Rh2AG131700 Rh2BG135000 Rh2CG135900 Rh2DG136400
rosa_wichuraiana	Rw2G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2013
Acc65I	GGTACC	1 cut(s)	2326
AccB1I	GGYRCC	2 cut(s)	1781, 2326
AccI	GTMKAC	2 cut(s)	1440, 1880
AccIII	TCCGGA	2 cut(s)	1480, 2168
AciI	CCGC	6 cut(s)	241, 1393, 1906, 2655, 2803, 2947
AclWI	GGATC	7 cut(s)	500, 1135, 1260, 1308, 1498, 2546, 2838
AcoI	YGGCCR	2 cut(s)	6, 2447
AcsI	RAATTY	7 cut(s)	413, 425, 1330, 1350, 1603, 2047, 2456
AcuI	CTGAAG	1 cut(s)	2771
AcvI	CACGTG	1 cut(s)	683
AdeI	CACNNNGTG	1 cut(s)	2298
AfaI	GTAC	7 cut(s)	188, 223, 365, 520, 952, 1260, 2328
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	7 cut(s)	44, 240, 515, 1480, 1751, 2360, 2755
AflII	CTTAAG	2 cut(s)	1193, 2618
AflIII	ACRYGT	1 cut(s)	1512
AhlI	ACTAGT	1 cut(s)	1451
AjnI	CCWGG	3 cut(s)	37, 101, 638
AloI	GAACNNNNNNTCC	2 cut(s)	149, 181
Alw21I	GWGCWC	2 cut(s)	2024, 2586
Alw26I	GTCTC	7 cut(s)	89, 648, 1221, 2327, 2351, 2680, 2925
AlwI	GGATC	7 cut(s)	500, 1135, 1260, 1308, 1498, 2546, 2838
AlwNI	CAGNNNCTG	1 cut(s)	2138
Ama87I	CYCGRG	1 cut(s)	2928
Aor13HI	TCCGGA	2 cut(s)	1480, 2168
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	5 cut(s)	6, 40, 2060, 2369, 2447
ApeKI	GCWGC	6 cut(s)	73, 1401, 1733, 2129, 2132, 2467
ApoI	RAATTY	7 cut(s)	413, 425, 1330, 1350, 1603, 2047, 2456
ArsI	GACNNNNNNTTYG	2 cut(s)	2956, 2988
AseI	ATTAAT	1 cut(s)	132
Asp700I	GAANNNNTTC	1 cut(s)	566
Asp718I	GGTACC	1 cut(s)	2326
AspLEI	GCGC	1 cut(s)	180
AspS9I	GGNCC	4 cut(s)	463, 2061, 2370, 2410
AsuHPI	GGTGA	6 cut(s)	26, 739, 1084, 1278, 1379, 2561
AvaI	CYCGRG	1 cut(s)	2928
AvaII	GGWCC	2 cut(s)	463, 2410
AxyI	CCTNAGG	4 cut(s)	491, 919, 1750, 2666
BaeGI	GKGCMC	1 cut(s)	836
BaeI	ACNNNNGTAYC	2 cut(s)	510, 543
BalI	TGGCCA	2 cut(s)	8, 2449
BanI	GGYRCC	2 cut(s)	1781, 2326
BanII	GRGCYC	1 cut(s)	2586
BauI	CACGAG	1 cut(s)	401
BbrPI	CACGTG	1 cut(s)	683
Bbv12I	GWGCWC	2 cut(s)	2024, 2586
BbvI	GCAGC	6 cut(s)	60, 1413, 1745, 2141, 2144, 2454
BccI	CCATC	9 cut(s)	950, 1291, 1366, 1772, 1957, 2386, 2458, 2636, 2955
BciT130I	CCWGG	3 cut(s)	39, 103, 640
BciVI	GTATCC	1 cut(s)	48
BcoDI	GTCTC	7 cut(s)	89, 648, 1221, 2327, 2351, 2680, 2925
BcuI	ACTAGT	1 cut(s)	1451
BfaI	CTAG	3 cut(s)	933, 1452, 2264
BfmI	CTRYAG	4 cut(s)	908, 1731, 2127, 2153
BfoI	RGCGCY	1 cut(s)	181
BfrI	CTTAAG	2 cut(s)	1193, 2618
BfuI	GTATCC	1 cut(s)	48
BglII	AGATCT	3 cut(s)	441, 1409, 2951
BisI	GCNGC	6 cut(s)	74, 1402, 1734, 2130, 2133, 2468
BlpI	GCTNAGC	2 cut(s)	851, 2696
BlsI	GCNGC	6 cut(s)	75, 1403, 1735, 2131, 2134, 2469
Bme1390I	CCNGG	3 cut(s)	39, 103, 640
Bme18I	GGWCC	2 cut(s)	463, 2410
BmeT110I	CYCGRG	1 cut(s)	2928
BmgT120I	GGNCC	4 cut(s)	463, 2061, 2370, 2410
BmiI	GGNNCC	8 cut(s)	24, 36, 259, 464, 1783, 1862, 2328, 2412
BmrFI	CCNGG	3 cut(s)	39, 103, 640
BmrI	ACTGGG	1 cut(s)	2290
BmsI	GCATC	4 cut(s)	770, 1549, 1579, 1682
BmuI	ACTGGG	1 cut(s)	2290
BplI	GAGNNNNNCTC	4 cut(s)	2011, 2043, 2727, 2759
BpmI	CTGGAG	2 cut(s)	622, 1507
Bpu10I	CCTNAGC	1 cut(s)	2585
Bpu1102I	GCTNAGC	2 cut(s)	851, 2696
BpuEI	CTTGAG	2 cut(s)	283, 1979
BsaAI	YACGTR	1 cut(s)	683
BsaBI	GATNNNNATC	2 cut(s)	1299, 1563
BsaI	GGTCTC	2 cut(s)	648, 1221
BsaJI	CCNNGG	3 cut(s)	43, 1396, 2064
BsaWI	WCCGGW	3 cut(s)	1480, 2168, 2329
BsaXI	ACNNNNNCTCC	4 cut(s)	1502, 1532, 1900, 1930
Bsc4I	CCNNNNNNNGG	7 cut(s)	44, 240, 515, 1480, 1751, 2360, 2755
Bse1I	ACTGG	5 cut(s)	285, 563, 1528, 1535, 2296
Bse21I	CCTNAGG	4 cut(s)	491, 919, 1750, 2666
Bse3DI	GCAATG	1 cut(s)	2509
Bse8I	GATNNNNATC	2 cut(s)	1299, 1563
BseAI	TCCGGA	2 cut(s)	1480, 2168
BseBI	CCWGG	3 cut(s)	39, 103, 640
BseDI	CCNNGG	3 cut(s)	43, 1396, 2064
BseGI	GGATG	4 cut(s)	508, 761, 2395, 2431
BseJI	GATNNNNATC	2 cut(s)	1299, 1563
BseLI	CCNNNNNNNGG	7 cut(s)	44, 240, 515, 1480, 1751, 2360, 2755
BseMI	GCAATG	1 cut(s)	2509
BseNI	ACTGG	5 cut(s)	285, 563, 1528, 1535, 2296
BseRI	GAGGAG	5 cut(s)	32, 35, 419, 1510, 1592
BseSI	GKGCMC	1 cut(s)	836
BseXI	GCAGC	6 cut(s)	60, 1413, 1745, 2141, 2144, 2454
BsgI	GTGCAG	2 cut(s)	495, 948
BshFI	GGCC	5 cut(s)	8, 42, 2062, 2371, 2449
BshNI	GGYRCC	2 cut(s)	1781, 2326
BsiHKAI	GWGCWC	2 cut(s)	2024, 2586
BsiHKCI	CYCGRG	1 cut(s)	2928
BsiSI	CCGG	3 cut(s)	1481, 2169, 2330
BslFI	GGGAC	2 cut(s)	476, 569
BslI	CCNNNNNNNGG	7 cut(s)	44, 240, 515, 1480, 1751, 2360, 2755
BsmAI	GTCTC	7 cut(s)	89, 648, 1221, 2327, 2351, 2680, 2925
BsmFI	GGGAC	2 cut(s)	476, 569
BsnI	GGCC	5 cut(s)	8, 42, 2062, 2371, 2449
Bso31I	GGTCTC	2 cut(s)	648, 1221
BsoBI	CYCGRG	1 cut(s)	2928
Bsp1286I	GDGCHC	3 cut(s)	836, 2024, 2586
Bsp13I	TCCGGA	2 cut(s)	1480, 2168
Bsp1720I	GCTNAGC	2 cut(s)	851, 2696
BspACI	CCGC	6 cut(s)	241, 1393, 1906, 2655, 2803, 2947
BspANI	GGCC	5 cut(s)	8, 42, 2062, 2371, 2449
BspEI	TCCGGA	2 cut(s)	1480, 2168
BspLI	GGNNCC	8 cut(s)	24, 36, 259, 464, 1783, 1862, 2328, 2412
BspMAI	CTGCAG	2 cut(s)	1735, 2131
BspPI	GGATC	7 cut(s)	500, 1135, 1260, 1308, 1498, 2546, 2838
BspT107I	GGYRCC	2 cut(s)	1781, 2326
BspTI	CTTAAG	2 cut(s)	1193, 2618
BspTNI	GGTCTC	2 cut(s)	648, 1221
BsrDI	GCAATG	1 cut(s)	2509
BsrI	ACTGG	5 cut(s)	285, 563, 1528, 1535, 2296
BssECI	CCNNGG	3 cut(s)	43, 1396, 2064
BssSI	CACGAG	1 cut(s)	401
BssT1I	CCWWGG	1 cut(s)	2064
Bst2BI	CACGAG	1 cut(s)	401
Bst2UI	CCWGG	3 cut(s)	39, 103, 640
Bst4CI	ACNGT	5 cut(s)	838, 912, 1445, 1593, 1762
Bst6I	CTCTTC	2 cut(s)	1641, 1951
BstAFI	CTTAAG	2 cut(s)	1193, 2618
BstAPI	GCANNNNNTGC	3 cut(s)	1013, 2126, 2846
BstBAI	YACGTR	1 cut(s)	683
BstC8I	GCNNGC	7 cut(s)	634, 759, 781, 2496, 2500, 2702, 2892
BstDSI	CCRYGG	1 cut(s)	43
BstENI	CCTNNNNNAGG	2 cut(s)	513, 1749
BstF5I	GGATG	4 cut(s)	508, 761, 2395, 2431
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	1 cut(s)	180
BstMAI	GTCTC	7 cut(s)	89, 648, 1221, 2327, 2351, 2680, 2925
BstMWI	GCNNNNNNNGC	7 cut(s)	938, 1013, 1219, 1401, 2126, 2701, 2846
BstNI	CCWGG	3 cut(s)	39, 103, 640
BstNSI	RCATGY	2 cut(s)	2498, 2695
BstSCI	CCNGG	3 cut(s)	37, 101, 638
BstSFI	CTRYAG	4 cut(s)	908, 1731, 2127, 2153
BstSLI	GKGCMC	1 cut(s)	836
BstV1I	GCAGC	6 cut(s)	60, 1413, 1745, 2141, 2144, 2454
BstX2I	RGATCY	4 cut(s)	441, 1252, 1409, 2951
BstYI	RGATCY	4 cut(s)	441, 1252, 1409, 2951
Bsu36I	CCTNAGG	4 cut(s)	491, 919, 1750, 2666
BsuI	GTATCC	1 cut(s)	48
BsuRI	GGCC	5 cut(s)	8, 42, 2062, 2371, 2449
BtgI	CCRYGG	1 cut(s)	43
BtgZI	GCGATG	1 cut(s)	2821
BtsCI	GGATG	4 cut(s)	508, 761, 2395, 2431
BtsI	GCAGTG	2 cut(s)	334, 2686
BtsIMutI	CAGTG	6 cut(s)	292, 334, 834, 1767, 2303, 2686
Cac8I	GCNNGC	7 cut(s)	634, 759, 781, 2496, 2500, 2702, 2892
CaiI	CAGNNNCTG	1 cut(s)	2138
CfoI	GCGC	1 cut(s)	180
Cfr13I	GGNCC	4 cut(s)	463, 2061, 2370, 2410
CseI	GACGC	1 cut(s)	65
Csp6I	GTAC	7 cut(s)	187, 222, 364, 519, 951, 1259, 2327
CviQI	GTAC	7 cut(s)	187, 222, 364, 519, 951, 1259, 2327
DraI	TTTAAA	3 cut(s)	423, 624, 2545
DraIII	CACNNNGTG	1 cut(s)	2298
EaeI	YGGCCR	2 cut(s)	6, 2447
Eam1104I	CTCTTC	2 cut(s)	1641, 1951
EarI	CTCTTC	2 cut(s)	1641, 1951
EciI	GGCGGA	2 cut(s)	1921, 2962
Ecl136II	GAGCTC	1 cut(s)	2584
Eco130I	CCWWGG	1 cut(s)	2064
Eco24I	GRGCYC	1 cut(s)	2586
Eco31I	GGTCTC	2 cut(s)	648, 1221
Eco47I	GGWCC	2 cut(s)	463, 2410
Eco47III	AGCGCT	1 cut(s)	179
Eco53kI	GAGCTC	1 cut(s)	2584
Eco57I	CTGAAG	1 cut(s)	2771
Eco72I	CACGTG	1 cut(s)	683
Eco81I	CCTNAGG	4 cut(s)	491, 919, 1750, 2666
Eco88I	CYCGRG	1 cut(s)	2928
EcoICRI	GAGCTC	1 cut(s)	2584
EcoNI	CCTNNNNNAGG	2 cut(s)	513, 1749
EcoO109I	RGGNCCY	1 cut(s)	463
EcoRI	GAATTC	1 cut(s)	2456
EcoRII	CCWGG	3 cut(s)	37, 101, 638
EcoT14I	CCWWGG	1 cut(s)	2064
EcoT38I	GRGCYC	1 cut(s)	2586
ErhI	CCWWGG	1 cut(s)	2064
FalI	AAGNNNNNCTT	4 cut(s)	258, 290, 1914, 1946
FaqI	GGGAC	2 cut(s)	476, 569
FauI	CCCGC	2 cut(s)	234, 2662
FauNDI	CATATG	1 cut(s)	313
FblI	GTMKAC	2 cut(s)	1440, 1880
Fnu4HI	GCNGC	6 cut(s)	74, 1402, 1734, 2130, 2133, 2468
FokI	GGATG	4 cut(s)	515, 748, 2402, 2438
FriOI	GRGCYC	1 cut(s)	2586
Fsp4HI	GCNGC	6 cut(s)	74, 1402, 1734, 2130, 2133, 2468
FspBI	CTAG	3 cut(s)	933, 1452, 2264
GlaI	GCGC	1 cut(s)	179
GluI	GCNGC	6 cut(s)	74, 1402, 1734, 2130, 2133, 2468
GsuI	CTGGAG	2 cut(s)	622, 1507
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	5 cut(s)	8, 42, 2062, 2371, 2449
HapII	CCGG	3 cut(s)	1481, 2169, 2330
HgaI	GACGC	1 cut(s)	65
HhaI	GCGC	1 cut(s)	180
Hin6I	GCGC	1 cut(s)	178
HinP1I	GCGC	1 cut(s)	178
HindIII	AAGCTT	2 cut(s)	1190, 2631
HpaII	CCGG	3 cut(s)	1481, 2169, 2330
HphI	GGTGA	6 cut(s)	26, 739, 1084, 1278, 1379, 2561
Hpy166II	GTNNAC	7 cut(s)	730, 821, 1441, 1881, 2150, 2290, 2518
Hpy8I	GTNNAC	7 cut(s)	730, 821, 1441, 1881, 2150, 2290, 2518
HpyAV	CCTTC	8 cut(s)	85, 248, 476, 1187, 2052, 2097, 2264, 2608
HpyCH4III	ACNGT	5 cut(s)	838, 912, 1445, 1593, 1762
HpyCH4IV	ACGT	3 cut(s)	682, 1514, 1940
HpyF10VI	GCNNNNNNNGC	7 cut(s)	938, 1013, 1219, 1401, 2126, 2701, 2846
HpySE526I	ACGT	3 cut(s)	682, 1514, 1940
HspAI	GCGC	1 cut(s)	178
Kpn2I	TCCGGA	2 cut(s)	1480, 2168
KpnI	GGTACC	1 cut(s)	2330
LmnI	GCTCC	8 cut(s)	22, 34, 185, 236, 257, 641, 716, 1866
Lsp1109I	GCAGC	6 cut(s)	60, 1413, 1745, 2141, 2144, 2454
LweI	GCATC	4 cut(s)	770, 1549, 1579, 1682
MaeI	CTAG	3 cut(s)	933, 1452, 2264
MaeII	ACGT	3 cut(s)	682, 1514, 1940
MaeIII	GTNAC	4 cut(s)	1024, 1933, 2224, 2813
MfeI	CAATTG	3 cut(s)	522, 1091, 2792
MflI	RGATCY	4 cut(s)	441, 1252, 1409, 2951
MhlI	GDGCHC	3 cut(s)	836, 2024, 2586
MlsI	TGGCCA	2 cut(s)	8, 2449
MluNI	TGGCCA	2 cut(s)	8, 2449
MlyI	GAGTC	4 cut(s)	967, 1210, 1658, 2907
MmeI	TCCRAC	3 cut(s)	96, 1498, 2054
Mox20I	TGGCCA	2 cut(s)	8, 2449
MroI	TCCGGA	2 cut(s)	1480, 2168
MroXI	GAANNNNTTC	1 cut(s)	566
MscI	TGGCCA	2 cut(s)	8, 2449
MslI	CAYNNNNRTG	3 cut(s)	972, 1640, 1855
Msp20I	TGGCCA	2 cut(s)	8, 2449
MspA1I	CMGCKG	2 cut(s)	779, 1145
MspCI	CTTAAG	2 cut(s)	1193, 2618
MspI	CCGG	3 cut(s)	1481, 2169, 2330
MspR9I	CCNGG	3 cut(s)	39, 103, 640
MunI	CAATTG	3 cut(s)	522, 1091, 2792
MvaI	CCWGG	3 cut(s)	39, 103, 640
MwoI	GCNNNNNNNGC	7 cut(s)	938, 1013, 1219, 1401, 2126, 2701, 2846
NdeI	CATATG	1 cut(s)	313
NlaIV	GGNNCC	8 cut(s)	24, 36, 259, 464, 1783, 1862, 2328, 2412
NmeAIII	GCCGAG	1 cut(s)	1421
NmuCI	GTSAC	4 cut(s)	1024, 1933, 2224, 2813
NspI	RCATGY	2 cut(s)	2498, 2695
PaeI	GCATGC	1 cut(s)	2498
PaeR7I	CTCGAG	1 cut(s)	2928
PdmI	GAANNNNTTC	1 cut(s)	566
PkrI	GCNGC	6 cut(s)	75, 1403, 1735, 2131, 2134, 2469
PleI	GAGTC	4 cut(s)	966, 1210, 1657, 2907
PmaCI	CACGTG	1 cut(s)	683
PmlI	CACGTG	1 cut(s)	683
PpsI	GAGTC	4 cut(s)	966, 1210, 1657, 2907
Ppu21I	YACGTR	1 cut(s)	683
PpuMI	RGGWCCY	1 cut(s)	463
PshBI	ATTAAT	1 cut(s)	132
PsiI	TTATAA	1 cut(s)	2013
Psp124BI	GAGCTC	1 cut(s)	2586
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	3 cut(s)	37, 101, 638
PspCI	CACGTG	1 cut(s)	683
PspGI	CCWGG	3 cut(s)	37, 101, 638
PspN4I	GGNNCC	8 cut(s)	24, 36, 259, 464, 1783, 1862, 2328, 2412
PspPI	GGNCC	4 cut(s)	463, 2061, 2370, 2410
PspPPI	RGGWCCY	1 cut(s)	463
PsrI	GAACNNNNNNTAC	2 cut(s)	1438, 1470
PstI	CTGCAG	2 cut(s)	1735, 2131
PstNI	CAGNNNCTG	1 cut(s)	2138
PsuI	RGATCY	4 cut(s)	441, 1252, 1409, 2951
PvuII	CAGCTG	2 cut(s)	779, 1145
RsaI	GTAC	7 cut(s)	188, 223, 365, 520, 952, 1260, 2328
RsaNI	GTAC	7 cut(s)	187, 222, 364, 519, 951, 1259, 2327
RseI	CAYNNNNRTG	3 cut(s)	972, 1640, 1855
SacI	GAGCTC	1 cut(s)	2586
SatI	GCNGC	6 cut(s)	74, 1402, 1734, 2130, 2133, 2468
Sau96I	GGNCC	4 cut(s)	463, 2061, 2370, 2410
SchI	GAGTC	4 cut(s)	967, 1210, 1658, 2907
ScrFI	CCNGG	3 cut(s)	39, 103, 640
SduI	GDGCHC	3 cut(s)	836, 2024, 2586
SfaNI	GCATC	4 cut(s)	770, 1549, 1579, 1682
SfcI	CTRYAG	4 cut(s)	908, 1731, 2127, 2153
Sfr274I	CTCGAG	1 cut(s)	2928
SinI	GGWCC	2 cut(s)	463, 2410
SlaI	CTCGAG	1 cut(s)	2928
SmiMI	CAYNNNNRTG	3 cut(s)	972, 1640, 1855
SmlI	CTYRAG	5 cut(s)	298, 1193, 1958, 2618, 2928
SmoI	CTYRAG	5 cut(s)	298, 1193, 1958, 2618, 2928
SpeI	ACTAGT	1 cut(s)	1451
SphI	GCATGC	1 cut(s)	2498
SsiI	CCGC	6 cut(s)	241, 1393, 1906, 2655, 2803, 2947
SspMI	CTAG	3 cut(s)	933, 1452, 2264
SstI	GAGCTC	1 cut(s)	2586
StyD4I	CCNGG	3 cut(s)	37, 101, 638
StyI	CCWWGG	1 cut(s)	2064
TaaI	ACNGT	5 cut(s)	838, 912, 1445, 1593, 1762
TaiI	ACGT	3 cut(s)	685, 1517, 1943
TaqI	TCGA	2 cut(s)	207, 2929
TatI	WGTACW	1 cut(s)	950
TscAI	CASTG	6 cut(s)	292, 334, 841, 1767, 2303, 2686
TseFI	GTSAC	4 cut(s)	1024, 1933, 2224, 2813
TseI	GCWGC	6 cut(s)	73, 1401, 1733, 2129, 2132, 2467
Tsp45I	GTSAC	4 cut(s)	1024, 1933, 2224, 2813
TspDTI	ATGAA	8 cut(s)	264, 642, 1323, 1938, 2079, 2235, 2253, 2745
TspGWI	ACGGA	2 cut(s)	239, 833
TspRI	CASTG	6 cut(s)	292, 334, 841, 1767, 2303, 2686
Vha464I	CTTAAG	2 cut(s)	1193, 2618
VpaK11BI	GGWCC	2 cut(s)	463, 2410
VspI	ATTAAT	1 cut(s)	132
XagI	CCTNNNNNAGG	2 cut(s)	513, 1749
XapI	RAATTY	7 cut(s)	413, 425, 1330, 1350, 1603, 2047, 2456
XceI	RCATGY	2 cut(s)	2498, 2695
XhoI	CTCGAG	1 cut(s)	2928
XmiI	GTMKAC	2 cut(s)	1440, 1880
XmnI	GAANNNNTTC	1 cut(s)	566
XspI	CTAG	3 cut(s)	933, 1452, 2264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.