Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003296

Physical Location & Seq

Genomic Coordinates Forward (+)

6625954 .. 6629525

Gene Structure 3572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0082400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGACGTCAGTGGCGGTGGCGGTCAACGGCGGCGACGGAAACGGAAGCCGACGCGCCGTGAGGTGGGCGGTGGAGAATCTCATGCCCACAGCCGGTCGCTTCGTATTGGTCCACGTCATGCCCAGAATCACTTCAATTCCAACTCCATCAGGAGATCGCATCCCGGTGACGGAGCTAGACGAGGGTGTGGTGGCGACGTACGTGAATGACATGAAGGACAAGTACGAGGAGGTTTTCACTCCGTTAAAGAAGCTATGCCAGTCAAAGAAGGTTGAAACATTGGTATTAGAGGATGAGGTTCCTGCAAATGGGATTCTAAGCTTTATATCTCAGTCTGATATCAATTGTTTAGTTTTGGGCTCTAGCAATTCCAATTACATAACCAGGAAACTGAAGGGACCAGATGTACCGACAGTTGTTCTGAAATGTGCTCCCGAGAGTTGTGATATTCATGTCGTTTCGAAACAAAGAGTTATCACAAAATCAGCTAGTTCCTCATCTGCTTGTGAGTCTGGTACTGCTAACGGGCTGTCTACTCGAGGAGAAGATGGGAGGTTTTCCTCAGATATTAATGAAGGGATAACTGGAAGTCGTTTTTCCTACCTAGAATCCACAGTTAATGAAGGTTATGGAGCACCGTCAATGTCAGACCTTAGTTATCTAAGTTCTGAAGCATTTACGCGTATGGAATTTCCTGCAAACGCTAGTGTGGATCAGGAAAGGAATCATCAGAACTTGGAAGAGAACCTTGAGATTATTTCTTTCCAGCGTGGAAGTTCCTCAATTTCTTCAAACATTGAGCAGATTGAAGTGGAAAAGTTGCGTGCAGAATTGCAAAATACTCTTGGCATGTACAAACGAGCTTGTGAAGAGCTGGTACATGCCCAAAGCAAGGTCCAACTACTTTCTTCCGAATGCCTTGAAGAAGCAAGAAGAGTAAATGCTGCTCTTGAGAGTGAGGAAACTTTGAGAAAAATTGCTGCTGAAGAGGCAGCAAAGCATTTGAAGGCCAGGAAAGAGATTGAGGAGGCAAAACTTCTGCTTGCTAAAGAGGCTTATGAGAGGCAAATTGCTGAATTAAATGCCCTGAAAGAGTCAACAGGGAAAAAGGAATTTGTTGATGCACTCATCTCATGTGACAATAGGTACAGGAGATACAGTAGGAAGGAAATAGAGATAGCAACAAACTTCTTTTCAGAGACTAATGTGATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGCAGTCTTGATCAAACCCCGGTAGCTGTTAAGGTTCTTCGACCTGATGCAGTTGAGAAGAAAGAGGAGTTTCTGAAAGAGGTTGAAATTCTTAGTCAGCTACATCATCCTAACATAGTTTTGCTTCTTGGAGCTTGTCCAGAGATCGGTTGCCTGGTCTATGAATACCTGGAAAATGGGAACTTGGAAGATTATATCTCCCACCGCCAGAATGGAAAACCATCTCTCCCTTGGACTGTTAGGTTCAGGATAATTTTTGAAATAGCATGTGGGCTTGCATTCTTACACAACTCAAAGACGGACCCTATTGTGCATCGAGATCTAAAACCAGGTAATGTCTTACTGGACAGAAACTACTCGAGCAAAATCGGGGATGTTGGGCTGGCTAAACTCATTACAGACATCGTGCCTGACAACATAACGGAGTACAGAGAATCAATTATTGCTGGTACACTCTTTTACATGGATCCAGAGTATCAGAGAACTGGCACAATTAGACCCAAATCGGATTTATACGCATTTGGGGTCATTATCCTCCAACTATTGACAGCACGGCATCCAAATAGGCTTATATACATTGTGGAAAATGCAATTGCAAATGGTTCTTTTGCCGACTTTTTAGATGAGTCAGTCACAGATTGGCCGCTAGATGAAACAGAGGAATTGGCTCAACTTGCATTAAGGTGTTCAAAGCTTAGATGCAGGGATAGACCGGATCTTGAAACTGAAGTTCTGCCAGTTCTCAAAAGACTCGTTGATATTGCAGATCCTAGTTCTAAGATTGAGAGAAACCATATTGATGCACCAAGCCACTACTATTGTCCAATACTTCAGGAAATTATGGACGACCCACACATTTCTGCCGATGGCTTTACCTATGAGTACAGAGCAATCAAAGCATGGCTTGACAAACACAATGTATCCCCGGTGACAAGGCTTAGACTTCAGCATTCAGAGTTAACTCCTAACCATACATTGCGTTCAGCTATACAAGAATGGAGGTCACGTGTGACATACCCTACCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005856 GO:0005871 GO:0005875 GO:0005911 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022607 GO:0030054 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043515 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048285 GO:0051225 GO:0055044 GO:0070925 GO:0071840 GO:0090307 GO:0098687 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

756

Amino Acids

84.7

Weight (kDa)

5.45

Isoelectric Point (pI)

50.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	399 - 653	1.1e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	401 - 655	4e-41	Protein tyrosine and serine/threonine kinase
U-box	PF04564	682 - 748	2.3e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT3G51150 AT5G66310 AT5G66310 AT5G66310
fragaria_vesca	FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070 FvH4_1g12070
malus_domestica	MD00G1176100.v1.1 MD02G1110400.v1.1 MD02G1135300.v1.1 MD15G1248100.v1.1
prunus_persica	Prupe.7G166000_v2.0.a1 Prupe.7G166000_v2.0.a1
pyrus_communis	pycom02g10640 pycom15g21790
rosa_chinensis	RchiOBHm_Chr2g0099691
rosa_laevigata	RLG00000016906
rosa_multiflora	Rmu_sc0004019.1_g000007
rosa_roxburghii	Rroxscaffold_2G00142830
rosa_rugosa	Rorug02G0082100 Rorug02G0082200 Rorug02G0082300 Rorug02G0082400
rosa_samantha	Rh2AG131700 Rh2BG135000 Rh2CG135900 Rh2DG136400
rosa_wichuraiana	Rw2G010220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccI	GTMKAC	1 cut(s)	533
AccII	CGCG	2 cut(s)	54, 682
AciI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1886, 2265
AclWI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
AcoI	YGGCCR	1 cut(s)	1883
AcsI	RAATTY	3 cut(s)	689, 1112, 1329
AcuI	CTGAAG	6 cut(s)	413, 690, 1005, 1989, 2057, 2171
AcvI	CACGTG	1 cut(s)	2249
AcyI	GRCGYC	1 cut(s)	5
AfiI	CCNNNNNNNGG	6 cut(s)	63, 92, 169, 308, 892, 1388
AflIII	ACRYGT	2 cut(s)	680, 2248
AjiI	CACGTC	1 cut(s)	115
AjnI	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
Alw21I	GWGCWC	2 cut(s)	433, 637
Alw26I	GTCTC	1 cut(s)	1193
AlwI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
Ama87I	CYCGRG	3 cut(s)	434, 537, 1600
AoxI	GGCC	2 cut(s)	1008, 1883
ApeKI	GCWGC	3 cut(s)	944, 980, 992
ApoI	RAATTY	3 cut(s)	689, 1112, 1329
AseI	ATTAAT	1 cut(s)	570
Asp700I	GAANNNNTTC	1 cut(s)	130
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	4 cut(s)	109, 398, 895, 1543
AsuC2I	CCSGG	3 cut(s)	164, 1262, 2168
AsuHPI	GGTGA	3 cut(s)	178, 1226, 2182
AsuII	TTCGAA	1 cut(s)	461
AvaI	CYCGRG	3 cut(s)	434, 537, 1600
AvaII	GGWCC	4 cut(s)	109, 398, 895, 1543
BamHI	GGATCC	1 cut(s)	1708
BanII	GRGCYC	1 cut(s)	362
BarI	GAAGNNNNNNTAC	4 cut(s)	206, 238, 861, 893
BbrPI	CACGTG	1 cut(s)	2249
Bbv12I	GWGCWC	2 cut(s)	433, 637
BbvI	GCAGC	3 cut(s)	931, 967, 1004
BccI	CCATC	4 cut(s)	154, 542, 1471, 2102
BceAI	ACGGC	3 cut(s)	41, 43, 1811
BciT130I	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BciVI	GTATCC	1 cut(s)	2173
BclI	TGATCA	1 cut(s)	1252
BcnI	CCSGG	3 cut(s)	164, 1262, 2168
BcoDI	GTCTC	1 cut(s)	1193
BfaI	CTAG	7 cut(s)	176, 363, 489, 605, 705, 1889, 2013
BfuI	GTATCC	1 cut(s)	2173
BglII	AGATCT	1 cut(s)	1561
BisI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
BlsI	GCNGC	5 cut(s)	32, 946, 982, 994, 1887
Bme1390I	CCNGG	8 cut(s)	164, 385, 1012, 1262, 1397, 1412, 1572, 2168
Bme18I	GGWCC	4 cut(s)	109, 398, 895, 1543
BmeT110I	CYCGRG	3 cut(s)	434, 537, 1600
BmgBI	CACGTC	1 cut(s)	115
BmgT120I	GGNCC	4 cut(s)	109, 398, 895, 1543
BmiI	GGNNCC	4 cut(s)	300, 399, 1545, 1710
BmrFI	CCNGG	8 cut(s)	164, 385, 1012, 1262, 1397, 1412, 1572, 2168
BmsI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
Bpu14I	TTCGAA	1 cut(s)	461
BpuEI	CTTGAG	2 cut(s)	770, 971
BpuMI	CCSGG	3 cut(s)	164, 1262, 2168
BsaAI	YACGTR	2 cut(s)	202, 2249
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	3 cut(s)	1260, 1472, 2166
BsaWI	WCCGGW	1 cut(s)	1954
BsaXI	ACNNNNNCTCC	6 cut(s)	1144, 1174, 1452, 1482, 2233, 2263
Bsc4I	CCNNNNNNNGG	6 cut(s)	63, 92, 169, 308, 892, 1388
Bse118I	RCCGGY	1 cut(s)	92
Bse1I	ACTGG	5 cut(s)	259, 589, 1590, 1732, 1979
Bse3DI	GCAATG	1 cut(s)	2216
BseBI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BseDI	CCNNGG	3 cut(s)	1260, 1472, 2166
BseGI	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BseLI	CCNNNNNNNGG	6 cut(s)	63, 92, 169, 308, 892, 1388
BseMI	GCAATG	1 cut(s)	2216
BseMII	CTCAG	2 cut(s)	344, 576
BseNI	ACTGG	5 cut(s)	259, 589, 1590, 1732, 1979
BseRI	GAGGAG	4 cut(s)	242, 555, 1040, 1322
BseXI	GCAGC	3 cut(s)	931, 967, 1004
BsgI	GTGCAG	2 cut(s)	846, 1264
Bsh1236I	CGCG	2 cut(s)	54, 682
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	2 cut(s)	1010, 1885
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	2 cut(s)	433, 637
BsiHKCI	CYCGRG	3 cut(s)	434, 537, 1600
BsiSI	CCGG	5 cut(s)	93, 164, 1262, 1955, 2168
BsiWI	CGTACG	1 cut(s)	198
BslFI	GGGAC	1 cut(s)	411
BslI	CCNNNNNNNGG	6 cut(s)	63, 92, 169, 308, 892, 1388
BsmAI	GTCTC	1 cut(s)	1193
BsmFI	GGGAC	1 cut(s)	411
BsmI	GAATGC	3 cut(s)	920, 1520, 2191
BsnI	GGCC	2 cut(s)	1010, 1885
BsoBI	CYCGRG	3 cut(s)	434, 537, 1600
Bsp119I	TTCGAA	1 cut(s)	461
Bsp1286I	GDGCHC	3 cut(s)	362, 433, 637
Bsp1407I	TGTACA	1 cut(s)	852
Bsp143I	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
BspACI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1886, 2265
BspANI	GGCC	2 cut(s)	1010, 1885
BspCNI	CTCAG	2 cut(s)	343, 575
BspFNI	CGCG	2 cut(s)	54, 682
BspLI	GGNNCC	4 cut(s)	300, 399, 1545, 1710
BspPI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
BspQI	GCTCTTC	1 cut(s)	864
BspT104I	TTCGAA	1 cut(s)	461
BsrDI	GCAATG	1 cut(s)	2216
BsrFI	RCCGGY	1 cut(s)	92
BsrGI	TGTACA	1 cut(s)	852
BsrI	ACTGG	5 cut(s)	259, 589, 1590, 1732, 1979
BssAI	RCCGGY	1 cut(s)	92
BssECI	CCNNGG	3 cut(s)	1260, 1472, 2166
BssMI	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1472
Bst2UI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
Bst4CI	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
Bst6I	CTCTTC	4 cut(s)	735, 864, 928, 981
BstACI	GRCGYC	1 cut(s)	5
BstAUI	TGTACA	1 cut(s)	852
BstBAI	YACGTR	2 cut(s)	202, 2249
BstBI	TTCGAA	1 cut(s)	461
BstC8I	GCNNGC	4 cut(s)	825, 1044, 1518, 1626
BstDEI	CTNAG	9 cut(s)	317, 330, 562, 653, 662, 1334, 1937, 2019, 2180
BstF5I	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BstFNI	CGCG	2 cut(s)	54, 682
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	8 cut(s)	157, 715, 1255, 1389, 1564, 1711, 1960, 2011
BstMAI	GTCTC	1 cut(s)	1193
BstMBI	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
BstNI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BstNSI	RCATGY	3 cut(s)	853, 884, 1512
BstSCI	CCNGG	8 cut(s)	162, 383, 1010, 1260, 1395, 1410, 1570, 2166
BstUI	CGCG	2 cut(s)	54, 682
BstV1I	GCAGC	3 cut(s)	931, 967, 1004
BstX2I	RGATCY	4 cut(s)	1561, 1708, 1957, 2008
BstYI	RGATCY	4 cut(s)	1561, 1708, 1957, 2008
BsuI	GTATCC	1 cut(s)	2173
BsuRI	GGCC	2 cut(s)	1010, 1885
BtrI	CACGTC	1 cut(s)	115
BtsCI	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BtsIMutI	CAGTG	1 cut(s)	15
Cac8I	GCNNGC	4 cut(s)	825, 1044, 1518, 1626
CfoI	GCGC	1 cut(s)	56
Cfr10I	RCCGGY	1 cut(s)	92
Cfr13I	GGNCC	4 cut(s)	109, 398, 895, 1543
CseI	GACGC	1 cut(s)	60
CsiI	ACCWGGT	1 cut(s)	1570
CspCI	CAANNNNNGTGG	2 cut(s)	2042, 2077
DdeI	CTNAG	9 cut(s)	317, 330, 562, 653, 662, 1334, 1937, 2019, 2180
DpnI	GATC	8 cut(s)	156, 714, 1254, 1388, 1563, 1710, 1959, 2010
DpnII	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
EaeI	YGGCCR	1 cut(s)	1883
Eam1104I	CTCTTC	4 cut(s)	735, 864, 928, 981
EarI	CTCTTC	4 cut(s)	735, 864, 928, 981
Eco130I	CCWWGG	1 cut(s)	1472
Eco24I	GRGCYC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	340
Eco47I	GGWCC	4 cut(s)	109, 398, 895, 1543
Eco57I	CTGAAG	6 cut(s)	413, 690, 1005, 1989, 2057, 2171
Eco72I	CACGTG	1 cut(s)	2249
Eco88I	CYCGRG	3 cut(s)	434, 537, 1600
EcoRII	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
EcoRV	GATATC	1 cut(s)	340
EcoT14I	CCWWGG	1 cut(s)	1472
EcoT38I	GRGCYC	1 cut(s)	362
ErhI	CCWWGG	1 cut(s)	1472
FalI	AAGNNNNNCTT	4 cut(s)	732, 764, 2130, 2162
FaqI	GGGAC	1 cut(s)	411
FbaI	TGATCA	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	533
Fnu4HI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
FokI	GGATG	5 cut(s)	146, 305, 1335, 1628, 1785
FriOI	GRGCYC	1 cut(s)	362
Fsp4HI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
FspBI	CTAG	7 cut(s)	176, 363, 489, 605, 705, 1889, 2013
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
HaeIII	GGCC	2 cut(s)	1010, 1885
HapII	CCGG	5 cut(s)	93, 164, 1262, 1955, 2168
HgaI	GACGC	1 cut(s)	60
HhaI	GCGC	1 cut(s)	56
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	3 cut(s)	25, 1098, 2202
HindII	GTYRAC	3 cut(s)	25, 1098, 2202
HindIII	AAGCTT	2 cut(s)	319, 1934
HpaI	GTTAAC	1 cut(s)	2202
HpaII	CCGG	5 cut(s)	93, 164, 1262, 1955, 2168
HphI	GGTGA	3 cut(s)	178, 1226, 2182
Hpy166II	GTNNAC	7 cut(s)	25, 112, 534, 1098, 1237, 1694, 2202
Hpy8I	GTNNAC	7 cut(s)	25, 112, 534, 1098, 1237, 1694, 2202
Hpy99I	CGWCG	3 cut(s)	38, 54, 199
HpyAV	CCTTC	8 cut(s)	208, 262, 388, 569, 617, 1000, 1159, 1211
HpyCH4III	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
HpyCH4IV	ACGT	5 cut(s)	5, 114, 197, 201, 2248
HpyF10VI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
HpyF3I	CTNAG	9 cut(s)	317, 330, 562, 653, 662, 1334, 1937, 2019, 2180
HpySE526I	ACGT	5 cut(s)	5, 114, 197, 201, 2248
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	54
Ksp22I	TGATCA	1 cut(s)	1252
KspAI	GTTAAC	1 cut(s)	2202
Kzo9I	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
LguI	GCTCTTC	1 cut(s)	864
LmnI	GCTCC	4 cut(s)	172, 436, 632, 1373
Lsp1109I	GCAGC	3 cut(s)	931, 967, 1004
LweI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
MabI	ACCWGGT	1 cut(s)	1570
MaeI	CTAG	7 cut(s)	176, 363, 489, 605, 705, 1889, 2013
MaeII	ACGT	5 cut(s)	5, 114, 197, 201, 2248
MaeIII	GTNAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
MalI	GATC	8 cut(s)	156, 714, 1254, 1388, 1563, 1710, 1959, 2010
MboI	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
MfeI	CAATTG	2 cut(s)	343, 1833
MflI	RGATCY	4 cut(s)	1561, 1708, 1957, 2008
MhlI	GDGCHC	3 cut(s)	362, 433, 637
MluI	ACGCGT	1 cut(s)	680
MlyI	GAGTC	4 cut(s)	518, 1103, 1877, 1986
MmeI	TCCRAC	3 cut(s)	164, 922, 1804
MroXI	GAANNNNTTC	1 cut(s)	130
MseI	TTAA	7 cut(s)	245, 570, 618, 1079, 1272, 1922, 2201
MslI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
MspI	CCGG	5 cut(s)	93, 164, 1262, 1955, 2168
MspR9I	CCNGG	8 cut(s)	164, 385, 1012, 1262, 1397, 1412, 1572, 2168
MunI	CAATTG	2 cut(s)	343, 1833
Mva1269I	GAATGC	3 cut(s)	920, 1520, 2191
MvaI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
MvnI	CGCG	2 cut(s)	54, 682
MwoI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
NciI	CCSGG	3 cut(s)	164, 1262, 2168
NdeII	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
NlaIV	GGNNCC	4 cut(s)	300, 399, 1545, 1710
NmuCI	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
NspI	RCATGY	3 cut(s)	853, 884, 1512
NspV	TTCGAA	1 cut(s)	461
PaeR7I	CTCGAG	2 cut(s)	537, 1600
PciSI	GCTCTTC	1 cut(s)	864
PctI	GAATGC	3 cut(s)	920, 1520, 2191
PdmI	GAANNNNTTC	1 cut(s)	130
PfeI	GAWTC	6 cut(s)	76, 126, 313, 608, 724, 1676
Pfl23II	CGTACG	1 cut(s)	198
PkrI	GCNGC	5 cut(s)	32, 946, 982, 994, 1887
PleI	GAGTC	4 cut(s)	517, 1102, 1876, 1986
PmaCI	CACGTG	1 cut(s)	2249
PmlI	CACGTG	1 cut(s)	2249
PpsI	GAGTC	4 cut(s)	517, 1102, 1876, 1986
Ppu21I	YACGTR	2 cut(s)	202, 2249
PshBI	ATTAAT	1 cut(s)	570
Psp6I	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
PspCI	CACGTG	1 cut(s)	2249
PspGI	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
PspLI	CGTACG	1 cut(s)	198
PspN4I	GGNNCC	4 cut(s)	300, 399, 1545, 1710
PspPI	GGNCC	4 cut(s)	109, 398, 895, 1543
PspXI	VCTCGAGB	2 cut(s)	537, 1600
PsuI	RGATCY	4 cut(s)	1561, 1708, 1957, 2008
RseI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
SapI	GCTCTTC	1 cut(s)	864
SaqAI	TTAA	7 cut(s)	245, 570, 618, 1079, 1272, 1922, 2201
SatI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
Sau3AI	GATC	8 cut(s)	154, 712, 1252, 1386, 1561, 1708, 1957, 2008
Sau96I	GGNCC	4 cut(s)	109, 398, 895, 1543
SchI	GAGTC	4 cut(s)	518, 1103, 1877, 1986
ScrFI	CCNGG	8 cut(s)	164, 385, 1012, 1262, 1397, 1412, 1572, 2168
SduI	GDGCHC	3 cut(s)	362, 433, 637
SexAI	ACCWGGT	1 cut(s)	1570
SfaNI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
Sfr274I	CTCGAG	2 cut(s)	537, 1600
SfuI	TTCGAA	1 cut(s)	461
SinI	GGWCC	4 cut(s)	109, 398, 895, 1543
SlaI	CTCGAG	2 cut(s)	537, 1600
SmiMI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
SmlI	CTYRAG	4 cut(s)	537, 749, 950, 1600
SmoI	CTYRAG	4 cut(s)	537, 749, 950, 1600
SsiI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1886, 2265
SspMI	CTAG	7 cut(s)	176, 363, 489, 605, 705, 1889, 2013
StyD4I	CCNGG	8 cut(s)	162, 383, 1010, 1260, 1395, 1410, 1570, 2166
StyI	CCWWGG	1 cut(s)	1472
TaaI	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
TaiI	ACGT	5 cut(s)	8, 117, 200, 204, 2251
TaqI	TCGA	5 cut(s)	461, 538, 1282, 1558, 1601
TatI	WGTACW	3 cut(s)	852, 1668, 2124
TauI	GCSGC	2 cut(s)	33, 1888
TfiI	GAWTC	6 cut(s)	76, 126, 313, 608, 724, 1676
Tru1I	TTAA	7 cut(s)	245, 570, 618, 1079, 1272, 1922, 2201
Tru9I	TTAA	7 cut(s)	245, 570, 618, 1079, 1272, 1922, 2201
TscAI	CASTG	1 cut(s)	15
TseFI	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
TseI	GCWGC	3 cut(s)	944, 980, 992
Tsp45I	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
TspDTI	ATGAA	6 cut(s)	227, 440, 588, 636, 1419, 1908
TspGWI	ACGGA	6 cut(s)	51, 57, 185, 231, 1556, 1679
TspRI	CASTG	1 cut(s)	15
VpaK11BI	GGWCC	4 cut(s)	109, 398, 895, 1543
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	3 cut(s)	689, 1112, 1329
XceI	RCATGY	3 cut(s)	853, 884, 1512
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1451, 1470
XhoI	CTCGAG	2 cut(s)	537, 1600
XmiI	GTMKAC	1 cut(s)	533
XmnI	GAANNNNTTC	1 cut(s)	130
XspI	CTAG	7 cut(s)	176, 363, 489, 605, 705, 1889, 2013
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.