Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0007199

Physical Location & Seq

Genomic Coordinates Forward (+)

11399461 .. 11402179

Gene Structure 2719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGCGGATATCAAACGTGGCGAGGAGAGTACTGCACCCACCACCACCACTACCACCGCCAACATGTCCTCTAAGAAGAAGGAGCTTCTTTCTTCTGCCTTGAAGAGAACTAGTGAATGGATTTTTTCGCAGGAGATTCCGAGCGATATTAGTATTAATGTTGGAGGGGTTTCCTTCTCATTGCACAAGGACCTATCAAAATTGCAGTTCCCCTTGATTTCGAAGTGTGGACACATAAGGAAACTGATATCAGAATCTAGTGATGCTGCTGATCGATCTGTCATTGAACTATCTGATGTTCCGGGCGGATCAGAAGCATTTGAGCTTGCAGCAAAATTCTGCTATGGAATAAATTTCGAGATAAGCACAGAGAACATCGCAATGCTCCGATGTGTGGCAGAGTATCTTCTGATGACTGAGGACTATGCGGTTGGAAACCTTGTGGGAAGAGCTGATGCATACTTAAATGAAGTGGCATTGAAGAGCCCAGCAGGTGCAGTTACTGTTTTGCACATGTCAGAAAGTTTCCTCCCAATGGCGGAGAAGGTAAAATTAGTGAACCGCTGCATAGATGCAATTGCTTTTATAGCCTGCAAAGAGAGCCAGTTAAGTGTGTCCAGTAGGGCTGATGGCGGCAATGAGGGTGTGGTTTCTTCAGCTGTGTATCATCCAAAGCCTGTTGTGGATTGGTGGGCTGAAGACTTAATTGTTCTTAGAATCGATATGTTCCAACGTGTTATGATTGCAATGATGGCAAGAGGGTTTAAGCAATATGCTCTCGGACCAGTACTCATGCTCTATGCGCAGAAATCGCTAAGAGGTTTGGAAATATTTGGAAAGGGGAGGAAGAAAATCGAGCCGCGACAAGAGCACGAGAAGAGGGTTGTCTTAGAAACAATTGTGAGTCTATTGCCAAGGGAGAAAAATGCAATGTCAGTTAGCTTTCTTTCCATGCTTCTTCGTGCTGCGAAAACCCTGGAGACAACGGTTGCTTGCCAGCTAGATTTGGAGAAGAGAATAGGGTTGCAATTGGCACAGGCTGTTTTAGATGATCTCTTGATTCCATCATATACCTATACCGGGGACACATTGCTTGATGTCGACACTGTGCAAAGGATCGTGACGGATTACCTTGAATATGAAATGCAGGGGAGCCGTTTGGGATATAATGCAGAGGACGATTTTGGTTCTCCTCCACCAACTGACATGGAACGTGTCGGAAAGCTAATGGAGAACTACCTGGCTGAAATAGCCACTGACCGTAACGTATCTGTCTCAAAGTTCATTGGCATTGCTGAACTAATTCCAGAACAATCAAGGGAAACAGAAGATGGCATGTATAGAGCCATAGATATCTACCTAAAGGCTCATCCTGCTCTGAGTGATATGGAGAGAAAGAAAGTGTGTAGTATGATGGACTGCCAGAAACTTTCGCGCGAGGCCTGCGCTCACGCTGCGCAGAATGACCGGCTTCCTGTTCAAACTGTTGTACAAGTGCTATACTATGAGCAGCAGCGTCTTCGAGACGTCATGAATGGAAATCCCATAGGTGCTGAATCCTCTGTTCTTCCATCCAAAGGGAGCTTATACTCCACTGATATCCACCCAGTTCCTGATGAGCTCACCATCTTGCGCAGACAAAACGAAGAGCTGAAAATAGAGTTGGTGAAGATGAAAATGAAACTGAAAGAACTCGAAACGTCTACTACGAGAACAACAATGATCAGTCCAATGGGAAACACTCCAACATCTGCTGACAAACCTCCGCTGCCTCGAAAATCATTTATGAATTCAGTATCGAAAAAACTTGGGAAACTTTCTCCCTTTGTGCGTGCAGATGGAGTGACACCTACCGGTGCCAAAGGCCGAACAAAACCTGCCAAAGATCGACGGCATTCAATTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0042742 GO:0043207 GO:0050896 GO:0051704 GO:0051707 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

636

Amino Acids

70.47

Weight (kDa)

6.79

Isoelectric Point (pI)

40.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	229 - 482	8.2e-91	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67385 AT5G67385 AT5G67385 AT5G67385 AT5G67385
fragaria_vesca	FvH4_1g17280 FvH4_1g17280 FvH4_1g17280
malus_domestica	MD02G1182500.v1.1 MD15G1293800.v1.1
prunus_persica	Prupe.6G223600_v2.0.a1 Prupe.6G223600_v2.0.a1
pyrus_communis	pycom02g14800
rosa_chinensis	RchiOBHm_Chr2g0107471
rosa_laevigata	RLG00000017581
rosa_multiflora	Rmu_sc0005152.1_g000007
rosa_roxburghii	Rroxscaffold_2G00136300
rosa_rugosa	Rorug02G0143900 Rorug02G0144000 Rorug02G0144100 Rorug02G0144100
rosa_samantha	Rh2AG194000 Rh2BG206200 Rh2CG199200
rosa_wichuraiana	Rw2G015370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	482
AatII	GACGTC	1 cut(s)	1530
Acc16I	TGCGCA	3 cut(s)	804, 1458, 1634
Acc36I	ACCTGC	2 cut(s)	482, 1885
AccB1I	GGYRCC	1 cut(s)	1856
AccI	GTMKAC	2 cut(s)	1101, 1703
AccII	CGCG	3 cut(s)	862, 1435, 1437
AciI	CCGC	9 cut(s)	5, 57, 306, 428, 539, 562, 633, 860, 1766
AclWI	GGATC	2 cut(s)	316, 1124
AcsI	RAATTY	3 cut(s)	335, 352, 1789
AcuI	CTGAAG	2 cut(s)	639, 717
AcyI	GRCGYC	1 cut(s)	1527
AfaI	GTAC	3 cut(s)	31, 789, 1491
AfiI	CCNNNNNNNGG	5 cut(s)	394, 535, 538, 1080, 1577
AflIII	ACRYGT	4 cut(s)	63, 513, 733, 1213
AgeI	ACCGGT	1 cut(s)	1853
AgsI	TTSAA	6 cut(s)	103, 287, 481, 1136, 1481, 1899
AhlI	ACTAGT	1 cut(s)	110
AjnI	CCWGG	2 cut(s)	975, 1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	1646, 1678
Alw21I	GWGCWC	2 cut(s)	873, 1623
Alw26I	GTCTC	3 cut(s)	974, 1279, 1518
AlwI	GGATC	2 cut(s)	316, 1124
AlwNI	CAGNNNCTG	2 cut(s)	503, 1613
AoxI	GGCC	2 cut(s)	1440, 1864
ApeKI	GCWGC	8 cut(s)	266, 329, 564, 965, 1454, 1510, 1513, 1768
ApoI	RAATTY	3 cut(s)	335, 352, 1789
AseI	ATTAAT	1 cut(s)	156
AsiGI	ACCGGT	1 cut(s)	1853
Asp700I	GAANNNNTTC	1 cut(s)	1302
AspLEI	GCGC	5 cut(s)	805, 1437, 1448, 1459, 1635
AspS9I	GGNCC	2 cut(s)	190, 782
AsuC2I	CCSGG	2 cut(s)	303, 1081
AsuHPI	GGTGA	2 cut(s)	1615, 1678
AsuII	TTCGAA	1 cut(s)	221
AvaII	GGWCC	2 cut(s)	190, 782
BanI	GGYRCC	1 cut(s)	1856
BanII	GRGCYC	2 cut(s)	488, 1623
BauI	CACGAG	1 cut(s)	872
BbsI	GAAGAC	2 cut(s)	705, 1511
Bbv12I	GWGCWC	2 cut(s)	873, 1623
BbvI	GCAGC	8 cut(s)	253, 341, 551, 952, 1441, 1522, 1525, 1755
BccI	CCATC	8 cut(s)	623, 745, 1072, 1325, 1408, 1579, 1634, 1832
BceAI	ACGGC	1 cut(s)	1140
BcgI	CGANNNNNNTGC	2 cut(s)	1502, 1536
BciT130I	CCWGG	2 cut(s)	977, 1241
BclI	TGATCA	1 cut(s)	1722
BcnI	CCSGG	2 cut(s)	303, 1081
BcoDI	GTCTC	3 cut(s)	974, 1279, 1518
BcuI	ACTAGT	1 cut(s)	110
BfaI	CTAG	3 cut(s)	111, 258, 1001
BfuAI	ACCTGC	2 cut(s)	482, 1885
BmcAI	AGTACT	2 cut(s)	31, 789
Bme1390I	CCNGG	4 cut(s)	303, 977, 1081, 1241
Bme18I	GGWCC	2 cut(s)	190, 782
BmgT120I	GGNCC	2 cut(s)	190, 782
BmiI	GGNNCC	2 cut(s)	1154, 1858
BmrFI	CCNGG	4 cut(s)	303, 977, 1081, 1241
BmrI	ACTGGG	1 cut(s)	1601
BmsI	GCATC	3 cut(s)	253, 445, 562
BmuI	ACTGGG	1 cut(s)	1601
BpiI	GAAGAC	2 cut(s)	705, 1511
BpmI	CTGGAG	1 cut(s)	998
Bpu14I	TTCGAA	1 cut(s)	221
BpuMI	CCSGG	2 cut(s)	303, 1081
Bsa29I	ATCGAT	2 cut(s)	274, 720
BsaHI	GRCGYC	1 cut(s)	1527
BsaJI	CCNNGG	3 cut(s)	914, 975, 1080
BsaWI	WCCGGW	1 cut(s)	1853
Bsc4I	CCNNNNNNNGG	5 cut(s)	394, 535, 538, 1080, 1577
Bse118I	RCCGGY	2 cut(s)	1467, 1853
Bse1I	ACTGG	4 cut(s)	604, 618, 785, 1607
Bse3DI	GCAATG	7 cut(s)	179, 387, 643, 753, 936, 1088, 1290
BseBI	CCWGG	2 cut(s)	977, 1241
BseCI	ATCGAT	2 cut(s)	274, 720
BseDI	CCNNGG	3 cut(s)	914, 975, 1080
BseGI	GGATG	3 cut(s)	667, 1369, 1571
BseLI	CCNNNNNNNGG	5 cut(s)	394, 535, 538, 1080, 1577
BseMI	GCAATG	7 cut(s)	179, 387, 643, 753, 936, 1088, 1290
BseMII	CTCAG	2 cut(s)	408, 1370
BseNI	ACTGG	4 cut(s)	604, 618, 785, 1607
BseRI	GAGGAG	2 cut(s)	38, 1182
BseXI	GCAGC	8 cut(s)	253, 341, 551, 952, 1441, 1522, 1525, 1755
BseYI	CCCAGC	1 cut(s)	487
BsgI	GTGCAG	3 cut(s)	18, 516, 1854
Bsh1236I	CGCG	3 cut(s)	862, 1435, 1437
BshFI	GGCC	2 cut(s)	1442, 1866
BshNI	GGYRCC	1 cut(s)	1856
BshTI	ACCGGT	1 cut(s)	1853
BshVI	ATCGAT	2 cut(s)	274, 720
BsiHKAI	GWGCWC	2 cut(s)	873, 1623
BsiSI	CCGG	4 cut(s)	302, 1080, 1468, 1854
BslFI	GGGAC	1 cut(s)	1097
BslI	CCNNNNNNNGG	5 cut(s)	394, 535, 538, 1080, 1577
BsmAI	GTCTC	3 cut(s)	974, 1279, 1518
BsmBI	CGTCTC	1 cut(s)	1518
BsmFI	GGGAC	1 cut(s)	1097
BsmI	GAATGC	1 cut(s)	1894
BsnI	GGCC	2 cut(s)	1442, 1866
Bsp119I	TTCGAA	1 cut(s)	221
Bsp1286I	GDGCHC	3 cut(s)	488, 873, 1623
Bsp1407I	TGTACA	1 cut(s)	1489
Bsp143I	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
BspACI	CCGC	9 cut(s)	5, 57, 306, 428, 539, 562, 633, 860, 1766
BspANI	GGCC	2 cut(s)	1442, 1866
BspCNI	CTCAG	2 cut(s)	409, 1371
BspDI	ATCGAT	2 cut(s)	274, 720
BspFNI	CGCG	3 cut(s)	862, 1435, 1437
BspHI	TCATGA	1 cut(s)	1530
BspLI	GGNNCC	2 cut(s)	1154, 1858
BspMI	ACCTGC	2 cut(s)	482, 1885
BspPI	GGATC	2 cut(s)	316, 1124
BspQI	GCTCTTC	3 cut(s)	442, 476, 1641
BspT104I	TTCGAA	1 cut(s)	221
BspT107I	GGYRCC	1 cut(s)	1856
BsrDI	GCAATG	7 cut(s)	179, 387, 643, 753, 936, 1088, 1290
BsrFI	RCCGGY	2 cut(s)	1467, 1853
BsrGI	TGTACA	1 cut(s)	1489
BsrI	ACTGG	4 cut(s)	604, 618, 785, 1607
BssAI	RCCGGY	2 cut(s)	1467, 1853
BssECI	CCNNGG	3 cut(s)	914, 975, 1080
BssMI	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
BssNI	GRCGYC	1 cut(s)	1527
BssSI	CACGAG	1 cut(s)	872
BssT1I	CCWWGG	1 cut(s)	914
Bst2BI	CACGAG	1 cut(s)	872
Bst2UI	CCWGG	2 cut(s)	977, 1241
Bst4CI	ACNGT	5 cut(s)	505, 988, 1108, 1262, 1486
Bst6I	CTCTTC	6 cut(s)	98, 442, 476, 872, 1007, 1641
BstACI	GRCGYC	1 cut(s)	1527
BstAUI	TGTACA	1 cut(s)	1489
BstBI	TTCGAA	1 cut(s)	221
BstC8I	GCNNGC	6 cut(s)	327, 592, 994, 998, 1444, 1833
BstDEI	CTNAG	6 cut(s)	72, 417, 713, 815, 889, 1379
BstF5I	GGATG	3 cut(s)	667, 1369, 1571
BstFNI	CGCG	3 cut(s)	862, 1435, 1437
BstHHI	GCGC	5 cut(s)	805, 1437, 1448, 1459, 1635
BstKTI	GATC	7 cut(s)	274, 278, 311, 1054, 1119, 1725, 1888
BstMAI	GTCTC	3 cut(s)	974, 1279, 1518
BstMBI	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
BstNI	CCWGG	2 cut(s)	977, 1241
BstNSI	RCATGY	3 cut(s)	67, 517, 1339
BstSCI	CCNGG	4 cut(s)	301, 975, 1079, 1239
BstUI	CGCG	3 cut(s)	862, 1435, 1437
BstV1I	GCAGC	8 cut(s)	253, 341, 551, 952, 1441, 1522, 1525, 1755
BstV2I	GAAGAC	2 cut(s)	705, 1511
Bsu15I	ATCGAT	2 cut(s)	274, 720
BsuRI	GGCC	2 cut(s)	1442, 1866
BsuTUI	ATCGAT	2 cut(s)	274, 720
BtgZI	GCGATG	1 cut(s)	361
BtsCI	GGATG	3 cut(s)	667, 1369, 1571
BtsIMutI	CAGTG	3 cut(s)	1104, 1254, 1593
BveI	ACCTGC	2 cut(s)	482, 1885
Cac8I	GCNNGC	6 cut(s)	327, 592, 994, 998, 1444, 1833
CaiI	CAGNNNCTG	2 cut(s)	503, 1613
CciI	TCATGA	1 cut(s)	1530
CfoI	GCGC	5 cut(s)	805, 1437, 1448, 1459, 1635
Cfr10I	RCCGGY	2 cut(s)	1467, 1853
Cfr13I	GGNCC	2 cut(s)	190, 782
ClaI	ATCGAT	2 cut(s)	274, 720
CseI	GACGC	1 cut(s)	1505
Csp6I	GTAC	3 cut(s)	30, 788, 1490
CspAI	ACCGGT	1 cut(s)	1853
CviAII	CATG	7 cut(s)	64, 514, 793, 952, 1207, 1336, 1531
CviQI	GTAC	3 cut(s)	30, 788, 1490
DdeI	CTNAG	6 cut(s)	72, 417, 713, 815, 889, 1379
DpnI	GATC	7 cut(s)	273, 277, 310, 1053, 1118, 1724, 1887
DpnII	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
Eam1104I	CTCTTC	6 cut(s)	98, 442, 476, 872, 1007, 1641
EarI	CTCTTC	6 cut(s)	98, 442, 476, 872, 1007, 1641
EciI	GGCGGA	3 cut(s)	20, 321, 554
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	1 cut(s)	914
Eco147I	AGGCCT	1 cut(s)	1442
Eco24I	GRGCYC	2 cut(s)	488, 1623
Eco32I	GATATC	4 cut(s)	10, 249, 1354, 1600
Eco47I	GGWCC	2 cut(s)	190, 782
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	2 cut(s)	639, 717
EcoICRI	GAGCTC	1 cut(s)	1621
EcoO109I	RGGNCCY	1 cut(s)	190
EcoRI	GAATTC	1 cut(s)	1789
EcoRII	CCWGG	2 cut(s)	975, 1239
EcoRV	GATATC	4 cut(s)	10, 249, 1354, 1600
EcoT14I	CCWWGG	1 cut(s)	914
EcoT22I	ATGCAT	1 cut(s)	460
EcoT38I	GRGCYC	2 cut(s)	488, 1623
ErhI	CCWWGG	1 cut(s)	914
Esp3I	CGTCTC	1 cut(s)	1518
FaeI	CATG	7 cut(s)	67, 517, 796, 955, 1210, 1339, 1534
FaqI	GGGAC	1 cut(s)	1097
FatI	CATG	7 cut(s)	63, 513, 792, 951, 1206, 1335, 1530
FbaI	TGATCA	1 cut(s)	1722
FblI	GTMKAC	2 cut(s)	1101, 1703
FokI	GGATG	3 cut(s)	654, 1356, 1558
FriOI	GRGCYC	2 cut(s)	488, 1623
FspBI	CTAG	3 cut(s)	111, 258, 1001
FspI	TGCGCA	3 cut(s)	804, 1458, 1634
GlaI	GCGC	5 cut(s)	804, 1436, 1447, 1458, 1634
GsaI	CCCAGC	1 cut(s)	491
GsuI	CTGGAG	1 cut(s)	998
HaeIII	GGCC	2 cut(s)	1442, 1866
HapII	CCGG	4 cut(s)	302, 1080, 1468, 1854
HgaI	GACGC	1 cut(s)	1505
HhaI	GCGC	5 cut(s)	805, 1437, 1448, 1459, 1635
Hin1I	GRCGYC	1 cut(s)	1527
Hin1II	CATG	7 cut(s)	67, 517, 796, 955, 1210, 1339, 1534
Hin6I	GCGC	5 cut(s)	803, 1435, 1446, 1457, 1633
HinP1I	GCGC	5 cut(s)	803, 1435, 1446, 1457, 1633
HincII	GTYRAC	1 cut(s)	1102
HindII	GTYRAC	1 cut(s)	1102
HinfI	GANTC	6 cut(s)	136, 254, 717, 904, 1060, 1556
HpaII	CCGG	4 cut(s)	302, 1080, 1468, 1854
HphI	GGTGA	2 cut(s)	1615, 1678
Hpy166II	GTNNAC	4 cut(s)	230, 559, 1102, 1704
Hpy188III	TCNNGA	8 cut(s)	358, 1057, 1120, 1307, 1523, 1531, 1613, 1905
Hpy8I	GTNNAC	4 cut(s)	230, 559, 1102, 1704
Hpy99I	CGWCG	1 cut(s)	1893
HpyAV	CCTTC	3 cut(s)	73, 184, 538
HpyCH4III	ACNGT	5 cut(s)	505, 988, 1108, 1262, 1486
HpyCH4IV	ACGT	6 cut(s)	16, 733, 1213, 1266, 1527, 1700
HpyF3I	CTNAG	6 cut(s)	72, 417, 713, 815, 889, 1379
HpySE526I	ACGT	6 cut(s)	16, 733, 1213, 1266, 1527, 1700
Hsp92I	GRCGYC	1 cut(s)	1527
Hsp92II	CATG	7 cut(s)	67, 517, 796, 955, 1210, 1339, 1534
HspAI	GCGC	5 cut(s)	803, 1435, 1446, 1457, 1633
Ksp22I	TGATCA	1 cut(s)	1722
Kzo9I	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
LguI	GCTCTTC	3 cut(s)	442, 476, 1641
LmnI	GCTCC	4 cut(s)	82, 390, 1152, 1581
Lsp1109I	GCAGC	8 cut(s)	253, 341, 551, 952, 1441, 1522, 1525, 1755
LweI	GCATC	3 cut(s)	253, 445, 562
MaeI	CTAG	3 cut(s)	111, 258, 1001
MaeII	ACGT	6 cut(s)	16, 733, 1213, 1266, 1527, 1700
MaeIII	GTNAC	4 cut(s)	499, 1120, 1262, 1843
MalI	GATC	7 cut(s)	273, 277, 310, 1053, 1118, 1724, 1887
MboI	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
MfeI	CAATTG	3 cut(s)	576, 897, 1028
MhlI	GDGCHC	3 cut(s)	488, 873, 1623
MlyI	GAGTC	1 cut(s)	913
MmeI	TCCRAC	5 cut(s)	142, 412, 754, 1198, 1769
Mph1103I	ATGCAT	1 cut(s)	460
MroXI	GAANNNNTTC	1 cut(s)	1302
MseI	TTAA	5 cut(s)	156, 464, 608, 704, 765
MslI	CAYNNNNRTG	1 cut(s)	380
MspA1I	CMGCKG	3 cut(s)	564, 659, 1768
MspI	CCGG	4 cut(s)	302, 1080, 1468, 1854
MspR9I	CCNGG	4 cut(s)	303, 977, 1081, 1241
MunI	CAATTG	3 cut(s)	576, 897, 1028
Mva1269I	GAATGC	1 cut(s)	1894
MvaI	CCWGG	2 cut(s)	977, 1241
MvnI	CGCG	3 cut(s)	862, 1435, 1437
NciI	CCSGG	2 cut(s)	303, 1081
NdeII	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
NlaIII	CATG	7 cut(s)	67, 517, 796, 955, 1210, 1339, 1534
NlaIV	GGNNCC	2 cut(s)	1154, 1858
NmuCI	GTSAC	2 cut(s)	1120, 1843
NsbI	TGCGCA	3 cut(s)	804, 1458, 1634
NsiI	ATGCAT	1 cut(s)	460
NspI	RCATGY	3 cut(s)	67, 517, 1339
NspV	TTCGAA	1 cut(s)	221
PagI	TCATGA	1 cut(s)	1530
PaqCI	CACCTGC	1 cut(s)	482
PceI	AGGCCT	1 cut(s)	1442
PciI	ACATGT	2 cut(s)	63, 513
PciSI	GCTCTTC	3 cut(s)	442, 476, 1641
PcsI	WCGNNNNNNNCGW	1 cut(s)	1706
PctI	GAATGC	1 cut(s)	1894
PdmI	GAANNNNTTC	1 cut(s)	1302
PfeI	GAWTC	5 cut(s)	136, 254, 717, 1060, 1556
PinAI	ACCGGT	1 cut(s)	1853
PleI	GAGTC	1 cut(s)	912
PpsI	GAGTC	1 cut(s)	912
PpuMI	RGGWCCY	1 cut(s)	190
PscI	ACATGT	2 cut(s)	63, 513
PshBI	ATTAAT	1 cut(s)	156
Psp124BI	GAGCTC	1 cut(s)	1623
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	2 cut(s)	975, 1239
PspFI	CCCAGC	1 cut(s)	487
PspGI	CCWGG	2 cut(s)	975, 1239
PspN4I	GGNNCC	2 cut(s)	1154, 1858
PspPI	GGNCC	2 cut(s)	190, 782
PspPPI	RGGWCCY	1 cut(s)	190
PstNI	CAGNNNCTG	2 cut(s)	503, 1613
PvuII	CAGCTG	1 cut(s)	659
RsaI	GTAC	3 cut(s)	31, 789, 1491
RsaNI	GTAC	3 cut(s)	30, 788, 1490
RseI	CAYNNNNRTG	1 cut(s)	380
SacI	GAGCTC	1 cut(s)	1623
SalI	GTCGAC	1 cut(s)	1100
SapI	GCTCTTC	3 cut(s)	442, 476, 1641
SaqAI	TTAA	5 cut(s)	156, 464, 608, 704, 765
Sau3AI	GATC	7 cut(s)	271, 275, 308, 1051, 1116, 1722, 1885
Sau96I	GGNCC	2 cut(s)	190, 782
ScaI	AGTACT	2 cut(s)	31, 789
SchI	GAGTC	1 cut(s)	913
ScrFI	CCNGG	4 cut(s)	303, 977, 1081, 1241
SduI	GDGCHC	3 cut(s)	488, 873, 1623
SfaNI	GCATC	3 cut(s)	253, 445, 562
SfuI	TTCGAA	1 cut(s)	221
SinI	GGWCC	2 cut(s)	190, 782
SmiMI	CAYNNNNRTG	1 cut(s)	380
SpeI	ACTAGT	1 cut(s)	110
SseBI	AGGCCT	1 cut(s)	1442
SsiI	CCGC	9 cut(s)	5, 57, 306, 428, 539, 562, 633, 860, 1766
SspI	AATATT	1 cut(s)	831
SspMI	CTAG	3 cut(s)	111, 258, 1001
SstI	GAGCTC	1 cut(s)	1623
StuI	AGGCCT	1 cut(s)	1442
StyD4I	CCNGG	4 cut(s)	301, 975, 1079, 1239
StyI	CCWWGG	1 cut(s)	914
TaaI	ACNGT	5 cut(s)	505, 988, 1108, 1262, 1486
TaiI	ACGT	6 cut(s)	19, 736, 1216, 1269, 1530, 1703
TatI	WGTACW	3 cut(s)	29, 787, 1489
TauI	GCSGC	2 cut(s)	636, 862
TfiI	GAWTC	5 cut(s)	136, 254, 717, 1060, 1556
Tru1I	TTAA	5 cut(s)	156, 464, 608, 704, 765
Tru9I	TTAA	5 cut(s)	156, 464, 608, 704, 765
TscAI	CASTG	3 cut(s)	1111, 1261, 1600
TseFI	GTSAC	2 cut(s)	1120, 1843
TseI	GCWGC	8 cut(s)	266, 329, 564, 965, 1454, 1510, 1513, 1768
Tsp45I	GTSAC	2 cut(s)	1120, 1843
TspDTI	ATGAA	7 cut(s)	483, 1155, 1273, 1547, 1688, 1694, 1802
TspGWI	ACGGA	1 cut(s)	1139
TspRI	CASTG	3 cut(s)	1111, 1261, 1600
VpaK11BI	GGWCC	2 cut(s)	190, 782
VspI	ATTAAT	1 cut(s)	156
XapI	RAATTY	3 cut(s)	335, 352, 1789
XceI	RCATGY	3 cut(s)	67, 517, 1339
XmiI	GTMKAC	2 cut(s)	1101, 1703
XmnI	GAANNNNTTC	1 cut(s)	1302
XspI	CTAG	3 cut(s)	111, 258, 1001
ZraI	GACGTC	1 cut(s)	1528
ZrmI	AGTACT	2 cut(s)	31, 789
Zsp2I	ATGCAT	1 cut(s)	460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.