pycom02g16640

Protein of unknown function (DUF1499)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
13896892 .. 13897617
726 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g16640.4

Sequence Viewer

Length: 381 bp
ATGGCTTCCATGGCGTACCCAGCAAGCTCCTCCTCCTTCTACAACCACTACAAGAATTACAGCAAACTGAAACAGCGTACCAGTTTCTCCATTCCCCATCGTATCATAGTTTCTCAGAAGCAGCAGCAGCAGCAAAACGACCATAAACCCACCGACCCAATTGGTCGAAGGGAAATAATACTGAGGAGCAGCGAATTGGCAGTGGTAGGAGCCATCTTCAACTTGAGTGGTAAAAAGCCCGAGTATCTTGGGGTGCAGAAAAATCAGCAAGCTTTGGCTCTTTGCCCAGCTACTAAGAATTGCATATCAACCTCTGAAAATGTCAGTGACCTTACCCATTATGCCCCTCCCTGGTTTCCAGAAGGTTTACCGACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.11

Weight (kDa)

9.48

Isoelectric Point (pI)

67.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010909)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 17, 79
AfiI CCNNNNNNNGG 1 cut(s) 351
AgsI TTSAA 1 cut(s) 220
AjnI CCWGG 1 cut(s) 350
AluBI AGCT 3 cut(s) 27, 272, 290
AluI AGCT 3 cut(s) 27, 272, 290
Ama87I CYCGRG 1 cut(s) 239
ApeKI GCWGC 5 cut(s) 121, 124, 127, 130, 189
AvaI CYCGRG 1 cut(s) 239
BbvI GCAGC 5 cut(s) 133, 136, 139, 142, 201
BccI CCATC 2 cut(s) 105, 221
BciT130I CCWGG 1 cut(s) 352
BisI GCNGC 5 cut(s) 122, 125, 128, 131, 190
BlsI GCNGC 5 cut(s) 123, 126, 129, 132, 191
Bme1390I CCNGG 1 cut(s) 352
BmeT110I CYCGRG 1 cut(s) 239
BmiI GGNNCC 1 cut(s) 211
BmrFI CCNGG 1 cut(s) 352
BpuEI CTTGAG 1 cut(s) 244
BsaJI CCNNGG 2 cut(s) 9, 350
Bsc4I CCNNNNNNNGG 1 cut(s) 351
Bse1I ACTGG 1 cut(s) 81
BseBI CCWGG 1 cut(s) 352
BseDI CCNNGG 2 cut(s) 9, 350
BseLI CCNNNNNNNGG 1 cut(s) 351
BseMII CTCAG 2 cut(s) 128, 173
BseNI ACTGG 1 cut(s) 81
BseRI GAGGAG 3 cut(s) 19, 22, 199
BseXI GCAGC 5 cut(s) 133, 136, 139, 142, 201
BseYI CCCAGC 2 cut(s) 19, 286
BsgI GTGCAG 1 cut(s) 275
BsiHKCI CYCGRG 1 cut(s) 239
BslI CCNNNNNNNGG 1 cut(s) 351
BsoBI CYCGRG 1 cut(s) 239
Bsp19I CCATGG 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 127, 174
BspLI GGNNCC 1 cut(s) 211
BsrI ACTGG 1 cut(s) 81
BssECI CCNNGG 2 cut(s) 9, 350
BssT1I CCWWGG 1 cut(s) 9
Bst2UI CCWGG 1 cut(s) 352
BstC8I GCNNGC 2 cut(s) 25, 270
BstDEI CTNAG 3 cut(s) 114, 182, 294
BstDSI CCRYGG 1 cut(s) 9
BstMWI GCNNNNNNNGC 4 cut(s) 11, 20, 127, 130
BstNI CCWGG 1 cut(s) 352
BstSCI CCNGG 1 cut(s) 350
BstV1I GCAGC 5 cut(s) 133, 136, 139, 142, 201
BtgI CCRYGG 1 cut(s) 9
BtsI GCAGTG 1 cut(s) 207
BtsIMutI CAGTG 2 cut(s) 207, 331
Cac8I GCNNGC 2 cut(s) 25, 270
Csp6I GTAC 2 cut(s) 16, 78
CspCI CAANNNNNGTGG 2 cut(s) 208, 243
CviAII CATG 1 cut(s) 10
CviJI RGCY 7 cut(s) 5, 27, 212, 238, 272, 278, 290
CviKI_1 RGCY 7 cut(s) 5, 27, 212, 238, 272, 278, 290
CviQI GTAC 2 cut(s) 16, 78
DdeI CTNAG 3 cut(s) 114, 182, 294
Eco130I CCWWGG 1 cut(s) 9
Eco88I CYCGRG 1 cut(s) 239
EcoRII CCWGG 1 cut(s) 350
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 1 cut(s) 13
FaiI YATR 5 cut(s) 11, 107, 144, 305, 342
FatI CATG 1 cut(s) 9
Fnu4HI GCNGC 5 cut(s) 122, 125, 128, 131, 190
Fsp4HI GCNGC 5 cut(s) 122, 125, 128, 131, 190
GluI GCNGC 5 cut(s) 122, 125, 128, 131, 190
GsaI CCCAGC 2 cut(s) 23, 290
Hin1II CATG 1 cut(s) 13
HindIII AAGCTT 1 cut(s) 270
Hpy166II GTNNAC 1 cut(s) 368
Hpy188I TCNGA 2 cut(s) 117, 316
Hpy188III TCNNGA 1 cut(s) 359
Hpy8I GTNNAC 1 cut(s) 368
HpyAV CCTTC 3 cut(s) 46, 162, 356
HpyCH4V TGCA 2 cut(s) 256, 303
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 20, 127, 130
HpyF3I CTNAG 3 cut(s) 114, 182, 294
Hsp92II CATG 1 cut(s) 13
LmnI GCTCC 3 cut(s) 32, 186, 209
LpnPI CCDG 6 cut(s) 33, 94, 300, 337, 364, 372
Lsp1109I GCAGC 5 cut(s) 133, 136, 139, 142, 201
MaeIII GTNAC 1 cut(s) 326
MboII GAAGA 1 cut(s) 208
MfeI CAATTG 1 cut(s) 159
MluCI AATT 4 cut(s) 55, 159, 194, 298
MnlI CCTC 5 cut(s) 40, 43, 177, 322, 357
MspR9I CCNGG 1 cut(s) 352
MunI CAATTG 1 cut(s) 159
MvaI CCWGG 1 cut(s) 352
MwoI GCNNNNNNNGC 4 cut(s) 11, 20, 127, 130
NcoI CCATGG 1 cut(s) 9
NlaIII CATG 1 cut(s) 13
NlaIV GGNNCC 1 cut(s) 211
NmuCI GTSAC 1 cut(s) 326
PkrI GCNGC 5 cut(s) 123, 126, 129, 132, 191
Psp6I CCWGG 1 cut(s) 350
PspFI CCCAGC 2 cut(s) 19, 286
PspGI CCWGG 1 cut(s) 350
PspN4I GGNNCC 1 cut(s) 211
RsaI GTAC 2 cut(s) 17, 79
RsaNI GTAC 2 cut(s) 16, 78
SatI GCNGC 5 cut(s) 122, 125, 128, 131, 190
ScrFI CCNGG 1 cut(s) 352
SetI ASST 6 cut(s) 29, 274, 292, 314, 333, 367
SmlI CTYRAG 1 cut(s) 223
SmoI CTYRAG 1 cut(s) 223
Sse9I AATT 4 cut(s) 55, 159, 194, 298
StyD4I CCNGG 1 cut(s) 350
StyI CCWWGG 1 cut(s) 9
TaqI TCGA 1 cut(s) 166
TasI AATT 4 cut(s) 55, 159, 194, 298
TscAI CASTG 2 cut(s) 207, 331
TseFI GTSAC 1 cut(s) 326
TseI GCWGC 5 cut(s) 121, 124, 127, 130, 189
Tsp45I GTSAC 1 cut(s) 326
TspRI CASTG 2 cut(s) 207, 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.