pycom02g19540
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
17415387 .. 17417940
2554 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g19540.7

Sequence Viewer

Length: 1116 bp
ATGGTTCTTGCGAGGCGTAAGGAGCGCGAATACTTTGAAACCAGTCCCGACTATGGGCACTTAGCTAATAGAATGGGTTCTGAGTATCTTGCAAAACTTCTCTCAAAGCATTTGGAGGATGCGATTAGGGCTCGAATACCAACCATCTTGTCTATGATTAACAAAAGCATTGATGAACTTGAATCTGAGATGGACCATCTTGGTAGGCCTGTTGCCGTTGATGCTGGGGCCCAATTGTACACTATACTGGAACTCTGCCGTGCATTTGACAGGATTTTCAAGGAGCATCTAGATGGAGGACGGGCCGGAGGTGATCGGATTTATGGTGTCTTTGATAACCAACTGCCTGCTGCATTGAAGAAGCTTCCATTTGATCGGCATCTTTCTATGCAGAATGTAAGGAAAGTAGTTTCAGAGGCTGATGGTTATCAGCCACACTTGATTGCTCCGGAGCAAGGTTACCGCCGCCTAATTGAAGGGTCACTGAGGTATTTTAGAGGGCCAGCCGAAGCTTCCGTAGATGCTGTTCACTTTGTCTTAAAAGAACTTGTGAGGAAGTCATTAGCAGAAACTCAGGAATTGAAGCGCTTTCCTAGTCTGCAAGCTGAAATAGCTGCTGCATGTAATGAAGCCTTGGATAGGTTCCGTGATGAAAGTAAGAAGACAACTCTTCGATTAGTGGACATGGAATCTGCATATTTGACTGTGGAGTTCTTTCGGAGACTTCCCCAGGAAATAGAGAACACAGGAAACCCAGGAAAGCCTGGTACAACACCAGCGGGAAAGCCTGGTACAACACCTGCCCCTGCCGTGGACCGCTACTCAGAGGGTCACTTTCAGAGGATAGGATCGAACGTATCCTCTTATGTGAGAATGGTGTCTGAGACACTGAGGAACACAATCCCCAAGGCTGTTGTTCATTGTCAAGTCAGAGAGGCTAAAATGTCGTTGCTGAATCACTTCTACATACAAATAGGGAAGAGAGAGGCTAAGCAGCTTTCCCAGCTGCTTGACGAAGATCCGGCCTTGATGGAAAGGAGGCAAGAGTGTGCTAAAAGGCTTGAATTGTACAAGTCAGCTAGGGATGAGATTGATTCTGTAGCATGGGTCCGCTGA

Protein Analysis

372

Amino Acids

42.16

Weight (kDa)

8.51

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 808
Acc36I ACCTGC 1 cut(s) 808
AccII CGCG 1 cut(s) 27
AccIII TCCGGA 1 cut(s) 448
AciI CCGC 5 cut(s) 463, 466, 779, 817, 1111
AclWI GGATC 2 cut(s) 856, 1013
AfaI GTAC 4 cut(s) 239, 769, 793, 1070
AfeI AGCGCT 1 cut(s) 587
AfiI CCNNNNNNNGG 5 cut(s) 53, 54, 455, 639, 811
AgsI TTSAA 7 cut(s) 38, 182, 280, 358, 476, 583, 1064
AjnI CCWGG 4 cut(s) 729, 754, 763, 787
AluBI AGCT 8 cut(s) 65, 364, 512, 605, 614, 997, 1006, 1079
AluI AGCT 8 cut(s) 65, 364, 512, 605, 614, 997, 1006, 1079
Alw26I GTCTC 2 cut(s) 715, 878
AlwI GGATC 2 cut(s) 856, 1013
AlwNI CAGNNNCTG 1 cut(s) 419
Aor13HI TCCGGA 1 cut(s) 448
Aor51HI AGCGCT 1 cut(s) 587
AoxI GGCC 5 cut(s) 206, 228, 303, 500, 1023
ApaI GGGCCC 1 cut(s) 232
ApeKI GCWGC 5 cut(s) 350, 614, 617, 994, 1006
Asp700I GAANNNNTTC 2 cut(s) 76, 959
AspLEI GCGC 2 cut(s) 27, 588
AspS9I GGNCC 7 cut(s) 193, 228, 229, 303, 500, 814, 1108
AsuHPI GGTGA 1 cut(s) 323
AvaII GGWCC 3 cut(s) 193, 814, 1108
BaeGI GKGCMC 2 cut(s) 60, 232
BanII GRGCYC 2 cut(s) 133, 232
BbsI GAAGAC 1 cut(s) 668
BbvI GCAGC 5 cut(s) 337, 601, 604, 993, 1006
BccI CCATC 6 cut(s) 152, 184, 204, 287, 416, 1024
BceAI ACGGC 3 cut(s) 200, 243, 794
BciT130I CCWGG 4 cut(s) 731, 756, 765, 789
BciVI GTATCC 1 cut(s) 868
BcoDI GTCTC 2 cut(s) 715, 878
BfaI CTAG 3 cut(s) 290, 594, 1080
BfmI CTRYAG 1 cut(s) 1098
BfoI RGCGCY 1 cut(s) 589
BfuAI ACCTGC 1 cut(s) 808
BfuI GTATCC 1 cut(s) 868
BisI GCNGC 6 cut(s) 351, 466, 615, 618, 995, 1007
BlpI GCTNAGC 1 cut(s) 990
BlsI GCNGC 6 cut(s) 352, 467, 616, 619, 996, 1008
Bme1390I CCNGG 4 cut(s) 731, 756, 765, 789
Bme18I GGWCC 3 cut(s) 193, 814, 1108
BmgT120I GGNCC 7 cut(s) 193, 228, 229, 303, 500, 814, 1108
BmiI GGNNCC 4 cut(s) 229, 230, 644, 1109
BmrFI CCNGG 4 cut(s) 731, 756, 765, 789
BmsI GCATC 5 cut(s) 109, 211, 295, 388, 511
BpiI GAAGAC 1 cut(s) 668
Bpu1102I GCTNAGC 1 cut(s) 990
BsaBI GATNNNNATC 2 cut(s) 378, 426
BsaJI CCNNGG 5 cut(s) 633, 729, 754, 810, 906
BsaWI WCCGGW 1 cut(s) 448
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 54, 455, 639, 811
Bse1I ACTGG 2 cut(s) 42, 252
Bse8I GATNNNNATC 2 cut(s) 378, 426
BseAI TCCGGA 1 cut(s) 448
BseBI CCWGG 4 cut(s) 731, 756, 765, 789
BseDI CCNNGG 5 cut(s) 633, 729, 754, 810, 906
BseGI GGATG 2 cut(s) 124, 1090
BseJI GATNNNNATC 2 cut(s) 378, 426
BseLI CCNNNNNNNGG 5 cut(s) 53, 54, 455, 639, 811
BseMII CTCAG 7 cut(s) 72, 177, 476, 587, 837, 873, 881
BseNI ACTGG 2 cut(s) 42, 252
BseSI GKGCMC 2 cut(s) 60, 232
BseXI GCAGC 5 cut(s) 337, 601, 604, 993, 1006
BseYI CCCAGC 2 cut(s) 224, 1002
Bsh1236I CGCG 1 cut(s) 27
BshFI GGCC 5 cut(s) 208, 230, 305, 502, 1025
BsiSI CCGG 3 cut(s) 306, 449, 1022
BslFI GGGAC 1 cut(s) 30
BslI CCNNNNNNNGG 5 cut(s) 53, 54, 455, 639, 811
BsmAI GTCTC 2 cut(s) 715, 878
BsmFI GGGAC 1 cut(s) 30
BsnI GGCC 5 cut(s) 208, 230, 305, 502, 1025
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 3 cut(s) 60, 133, 232
Bsp13I TCCGGA 1 cut(s) 448
Bsp1407I TGTACA 2 cut(s) 237, 1068
Bsp143I GATC 4 cut(s) 313, 373, 848, 1018
Bsp1720I GCTNAGC 1 cut(s) 990
BspACI CCGC 5 cut(s) 463, 466, 779, 817, 1111
BspANI GGCC 5 cut(s) 208, 230, 305, 502, 1025
BspCNI CTCAG 7 cut(s) 73, 178, 477, 586, 836, 874, 882
BspEI TCCGGA 1 cut(s) 448
BspFNI CGCG 1 cut(s) 27
BspLI GGNNCC 4 cut(s) 229, 230, 644, 1109
BspMI ACCTGC 1 cut(s) 808
BspPI GGATC 2 cut(s) 856, 1013
BsrGI TGTACA 2 cut(s) 237, 1068
BsrI ACTGG 2 cut(s) 42, 252
BssECI CCNNGG 5 cut(s) 633, 729, 754, 810, 906
BssMI GATC 4 cut(s) 313, 373, 848, 1018
BssT1I CCWWGG 2 cut(s) 633, 906
Bst2UI CCWGG 4 cut(s) 731, 756, 765, 789
Bst4CI ACNGT 1 cut(s) 706
Bst6I CTCTTC 2 cut(s) 675, 974
BstAUI TGTACA 2 cut(s) 237, 1068
BstC8I GCNNGC 3 cut(s) 348, 504, 603
BstDEI CTNAG 9 cut(s) 61, 81, 186, 485, 573, 823, 882, 890, 990
BstDSI CCRYGG 1 cut(s) 810
BstEII GGTNACC 1 cut(s) 458
BstENI CCTNNNNNAGG 1 cut(s) 637
BstF5I GGATG 2 cut(s) 124, 1090
BstFNI CGCG 1 cut(s) 27
BstH2I RGCGCY 1 cut(s) 589
BstHHI GCGC 2 cut(s) 27, 588
BstKTI GATC 4 cut(s) 316, 376, 851, 1021
BstMAI GTCTC 2 cut(s) 715, 878
BstMBI GATC 4 cut(s) 313, 373, 848, 1018
BstMWI GCNNNNNNNGC 5 cut(s) 22, 128, 221, 611, 1003
BstNI CCWGG 4 cut(s) 731, 756, 765, 789
BstNSI RCATGY 1 cut(s) 624
BstPI GGTNACC 1 cut(s) 458
BstSCI CCNGG 4 cut(s) 729, 754, 763, 787
BstSFI CTRYAG 1 cut(s) 1098
BstSLI GKGCMC 2 cut(s) 60, 232
BstUI CGCG 1 cut(s) 27
BstV1I GCAGC 5 cut(s) 337, 601, 604, 993, 1006
BstV2I GAAGAC 1 cut(s) 668
BstX2I RGATCY 1 cut(s) 1018
BstYI RGATCY 1 cut(s) 1018
BsuI GTATCC 1 cut(s) 868
BsuRI GGCC 5 cut(s) 208, 230, 305, 502, 1025
BtgI CCRYGG 1 cut(s) 810
BtsCI GGATG 2 cut(s) 124, 1090
BtsIMutI CAGTG 2 cut(s) 482, 887
BveI ACCTGC 1 cut(s) 808
Cac8I GCNNGC 3 cut(s) 348, 504, 603
CaiI CAGNNNCTG 1 cut(s) 419
CfoI GCGC 2 cut(s) 27, 588
Cfr13I GGNCC 7 cut(s) 193, 228, 229, 303, 500, 814, 1108
Csp6I GTAC 4 cut(s) 238, 768, 792, 1069
CviAII CATG 3 cut(s) 621, 685, 1104
CviQI GTAC 4 cut(s) 238, 768, 792, 1069
DdeI CTNAG 9 cut(s) 61, 81, 186, 485, 573, 823, 882, 890, 990
DpnI GATC 4 cut(s) 315, 375, 850, 1020
DpnII GATC 4 cut(s) 313, 373, 848, 1018
Eam1104I CTCTTC 2 cut(s) 675, 974
EarI CTCTTC 2 cut(s) 675, 974
Eco130I CCWWGG 2 cut(s) 633, 906
Eco147I AGGCCT 1 cut(s) 208
Eco24I GRGCYC 2 cut(s) 133, 232
Eco47I GGWCC 3 cut(s) 193, 814, 1108
Eco47III AGCGCT 1 cut(s) 587
Eco91I GGTNACC 1 cut(s) 458
EcoNI CCTNNNNNAGG 1 cut(s) 637
EcoO109I RGGNCCY 1 cut(s) 228
EcoO65I GGTNACC 1 cut(s) 458
EcoRII CCWGG 4 cut(s) 729, 754, 763, 787
EcoT14I CCWWGG 2 cut(s) 633, 906
EcoT38I GRGCYC 2 cut(s) 133, 232
ErhI CCWWGG 2 cut(s) 633, 906
FaeI CATG 3 cut(s) 624, 688, 1107
FaqI GGGAC 1 cut(s) 30
FatI CATG 3 cut(s) 620, 684, 1103
FauI CCCGC 1 cut(s) 772
Fnu4HI GCNGC 6 cut(s) 351, 466, 615, 618, 995, 1007
FokI GGATG 2 cut(s) 131, 1097
FriOI GRGCYC 2 cut(s) 133, 232
Fsp4HI GCNGC 6 cut(s) 351, 466, 615, 618, 995, 1007
FspBI CTAG 3 cut(s) 290, 594, 1080
GlaI GCGC 2 cut(s) 26, 587
GluI GCNGC 6 cut(s) 351, 466, 615, 618, 995, 1007
GsaI CCCAGC 2 cut(s) 228, 1006
HaeII RGCGCY 1 cut(s) 589
HaeIII GGCC 5 cut(s) 208, 230, 305, 502, 1025
HapII CCGG 3 cut(s) 306, 449, 1022
HhaI GCGC 2 cut(s) 27, 588
Hin1II CATG 3 cut(s) 624, 688, 1107
Hin6I GCGC 2 cut(s) 25, 586
HinP1I GCGC 2 cut(s) 25, 586
HindIII AAGCTT 2 cut(s) 362, 510
HinfI GANTC 4 cut(s) 182, 689, 955, 1094
HpaII CCGG 3 cut(s) 306, 449, 1022
HphI GGTGA 1 cut(s) 323
Hpy166II GTNNAC 4 cut(s) 240, 529, 682, 814
Hpy188I TCNGA 9 cut(s) 82, 187, 318, 415, 720, 826, 840, 883, 932
Hpy188III TCNNGA 4 cut(s) 47, 290, 449, 575
Hpy8I GTNNAC 4 cut(s) 240, 529, 682, 814
HpyAV CCTTC 1 cut(s) 470
HpyCH4III ACNGT 1 cut(s) 706
HpyCH4IV ACGT 1 cut(s) 855
HpyCH4V TGCA 7 cut(s) 92, 263, 353, 391, 601, 620, 695
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 128, 221, 611, 1003
HpyF3I CTNAG 9 cut(s) 61, 81, 186, 485, 573, 823, 882, 890, 990
HpySE526I ACGT 1 cut(s) 855
Hsp92II CATG 3 cut(s) 624, 688, 1107
HspAI GCGC 2 cut(s) 25, 586
Kpn2I TCCGGA 1 cut(s) 448
Kzo9I GATC 4 cut(s) 313, 373, 848, 1018
LmnI GCTCC 4 cut(s) 22, 283, 451, 451
Lsp1109I GCAGC 5 cut(s) 337, 601, 604, 993, 1006
LweI GCATC 5 cut(s) 109, 211, 295, 388, 511
MaeI CTAG 3 cut(s) 290, 594, 1080
MaeII ACGT 1 cut(s) 855
MaeIII GTNAC 3 cut(s) 458, 480, 830
MalI GATC 4 cut(s) 315, 375, 850, 1020
MboI GATC 4 cut(s) 313, 373, 848, 1018
MboII GAAGA 5 cut(s) 370, 662, 673, 991, 1028
MfeI CAATTG 1 cut(s) 233
MflI RGATCY 1 cut(s) 1018
MhlI GDGCHC 3 cut(s) 60, 133, 232
MluCI AATT 4 cut(s) 233, 471, 578, 1064
MroI TCCGGA 1 cut(s) 448
MroXI GAANNNNTTC 2 cut(s) 76, 959
MseI TTAA 2 cut(s) 159, 539
MslI CAYNNNNRTG 1 cut(s) 291
MspA1I CMGCKG 3 cut(s) 779, 1006, 1113
MspI CCGG 3 cut(s) 306, 449, 1022
MspR9I CCNGG 4 cut(s) 731, 756, 765, 789
MunI CAATTG 1 cut(s) 233
MvaI CCWGG 4 cut(s) 731, 756, 765, 789
MvnI CGCG 1 cut(s) 27
MwoI GCNNNNNNNGC 5 cut(s) 22, 128, 221, 611, 1003
NdeII GATC 4 cut(s) 313, 373, 848, 1018
NlaIII CATG 3 cut(s) 624, 688, 1107
NlaIV GGNNCC 4 cut(s) 229, 230, 644, 1109
NmuCI GTSAC 2 cut(s) 480, 830
NspI RCATGY 1 cut(s) 624
PaqCI CACCTGC 1 cut(s) 808
PceI AGGCCT 1 cut(s) 208
PdmI GAANNNNTTC 2 cut(s) 76, 959
PfeI GAWTC 4 cut(s) 182, 689, 955, 1094
PkrI GCNGC 6 cut(s) 352, 467, 616, 619, 996, 1008
Psp6I CCWGG 4 cut(s) 729, 754, 763, 787
PspEI GGTNACC 1 cut(s) 458
PspFI CCCAGC 2 cut(s) 224, 1002
PspGI CCWGG 4 cut(s) 729, 754, 763, 787
PspN4I GGNNCC 4 cut(s) 229, 230, 644, 1109
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 7 cut(s) 193, 228, 229, 303, 500, 814, 1108
PsrI GAACNNNNNNTAC 2 cut(s) 510, 542
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 1 cut(s) 1018
PvuII CAGCTG 1 cut(s) 1006
RsaI GTAC 4 cut(s) 239, 769, 793, 1070
RsaNI GTAC 4 cut(s) 238, 768, 792, 1069
RseI CAYNNNNRTG 1 cut(s) 291
SaqAI TTAA 2 cut(s) 159, 539
SatI GCNGC 6 cut(s) 351, 466, 615, 618, 995, 1007
Sau3AI GATC 4 cut(s) 313, 373, 848, 1018
Sau96I GGNCC 7 cut(s) 193, 228, 229, 303, 500, 814, 1108
ScrFI CCNGG 4 cut(s) 731, 756, 765, 789
SduI GDGCHC 3 cut(s) 60, 133, 232
SfaNI GCATC 5 cut(s) 109, 211, 295, 388, 511
SfcI CTRYAG 1 cut(s) 1098
SinI GGWCC 3 cut(s) 193, 814, 1108
SmiMI CAYNNNNRTG 1 cut(s) 291
Sse9I AATT 4 cut(s) 233, 471, 578, 1064
SseBI AGGCCT 1 cut(s) 208
SsiI CCGC 5 cut(s) 463, 466, 779, 817, 1111
SspMI CTAG 3 cut(s) 290, 594, 1080
StuI AGGCCT 1 cut(s) 208
StyD4I CCNGG 4 cut(s) 729, 754, 763, 787
StyI CCWWGG 2 cut(s) 633, 906
TaaI ACNGT 1 cut(s) 706
TaiI ACGT 1 cut(s) 858
TaqI TCGA 3 cut(s) 133, 673, 851
TasI AATT 4 cut(s) 233, 471, 578, 1064
TatI WGTACW 2 cut(s) 237, 1068
TauI GCSGC 1 cut(s) 468
TfiI GAWTC 4 cut(s) 182, 689, 955, 1094
Tru1I TTAA 2 cut(s) 159, 539
Tru9I TTAA 2 cut(s) 159, 539
TscAI CASTG 2 cut(s) 489, 894
TseFI GTSAC 2 cut(s) 480, 830
TseI GCWGC 5 cut(s) 350, 614, 617, 994, 1006
Tsp45I GTSAC 2 cut(s) 480, 830
TspDTI ATGAA 4 cut(s) 189, 642, 666, 908
TspGWI ACGGA 2 cut(s) 505, 635
TspRI CASTG 2 cut(s) 489, 894
VpaK11BI GGWCC 3 cut(s) 193, 814, 1108
XagI CCTNNNNNAGG 1 cut(s) 637
XbaI TCTAGA 1 cut(s) 289
XceI RCATGY 1 cut(s) 624
XmnI GAANNNNTTC 2 cut(s) 76, 959
XspI CTAG 3 cut(s) 290, 594, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.