Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005573

Physical Location & Seq

Genomic Coordinates Forward (+)

37146258 .. 37205030

Gene Structure 58773 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG183900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGACGACGATGGAGAGCTTGATCGGTTTGGTTAATCGGATACAGAGGGCCTGTACCGTGCTCGGCGACTACGGCGGTGGCGACAACACTTTCTCTTCCTTGTGGGAAGCTCTGCCCTCTGTTGCCGTCGTCGGCGGCCAGAGTTCGGGCAAGTCTTCGGTGCTGGAGAGCATCGTAGGGCGTGACTTTCTTCCCAGAGGATCAGGGATTGTGACGAGGCGGCCTTTGGTGTTGCAGCTGCACAAGACGGAAGAAGGAACACAGGAGTATGCCGAGTTTCTTCATCTCTCCAAGAGAAGATTTACTGATTTCTCCGCGGTTCGGAAGGAAATTCAGGATGAAACTGATAGAGTAACAGGAAGGTCAAAAATGATATCTCCTGTTCCTATCCATCTCAGTATCTACTCCCCCAACGTTGTGAACTTGACCCTAATTGATTTACCTGGTTTGACGAAAGTTGCTGTTGAGGGCCAGCCTGAAAGTATCGTTGAAGATATTGAAAACATGGTTCGATCTTATGTTGAGAAGCCTAATAGCATCATACTAGCAATTTCTCCAGCCAACCAAGATATCGCTACATCTGATGCTATCAAACTTGCACGGGAAGTGGATCCAGCAGGTGAACGAACGTTTGGGGTGATGACAAAGCTTGATTTGATGGACAAAGGAACTAACGCTTTGGATGTTATTGAAGGAAGATCTTATCGCCTGCAACATCCTTGGGTTGGAGTTGTGAACCGTTCCCAAGCAGATATTAATAAAAATACGGACATGATTGTCGCAAGGCGCAAGGAACGTGAGTACTTTGCAACCAGTCCTGACTATGGGCACTTGGCTAATAGAATGGGTTCAGAGTACCTTGCTAAACTTCTGTCACAGCACTTGGAGTCTGTAATTAGGGCTCGTATCCCAAGTATCACATCCTTGATTAACAAAAGCATTGATGAACTTGAATCCGAGATGGACCATCTTGGTAGGCCTATAGCCGTTGACGCTGGGGCTCAGTTATACACTATCCTGGAACTTTGCCGTGCATTTGACCGAATATTTAAAGAGCACTTAGATGGAGGGCGACCCGGAGGTGATAGGATTTATGGTGTCTTTGACAACCAGCTGCCTGCTGCTTTGAGGAAGCTTCCATTTGATCGACATCTGTCTATGCAGAATGTTAGGAAAGTGGTTTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGCCGCCTTATTGAGGGATCACTGAATTACTTTAGAGGTCCAGCTGAGGCTTCTGTGGATGCTGTCCACTTTGTCTTGAAAGAACTTGTGAGGAAGTCATTAGCAGAAACTCAGGAATTGAGACGGTTTCCGAGTCTGCAAGCTGAAATAGCGGGTGCAGCTAATGAAGCATTGGAAAGGTTCCGTGATGAGAGTAAGAAGTCAACTCTGCGCTTAGTGGACATGGAATCCTCATACTTGACTGTGGAATTCTTTCGAAGACTTCCACAGGAAGTGGAGAAACCAGTTGGCCCAGGAGGAAAACCAGGACAGCCGGGAGGAAATCCAGCTGCCAATGCTGCTGTAGACCGCTATTCAGAGGGTCACTTTCGGAGGATAGGATCGAACGTGTCCTCTTATGTGGGAATGGTGTCTGAGACACTGAGGAATACGATTCCCAAGGCTGTCGTTCACTGTCAAGTCAGGGAGGCAAAAACGTCATTGCTAAATCACTTCTATATACAAATAGGAAAGAGAGAGGTACTCTCTCTCTCTCTCTCTCTCTCAATACACACAAGCACACACTCTTGGAGCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

603

Amino Acids

66.96

Weight (kDa)

7.0

Isoelectric Point (pI)

44.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	41 - 217	4.2e-56	Dynamin family
Dynamin_M	PF01031	225 - 492	9.2e-63	Dynamin central region
GED	PF02212	530 - 586	3.9e-12	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44590 AT2G44590 AT2G44590 AT3G60190
fragaria_vesca	FvH4_7g08650 FvH4_7g08650 FvH4_7g08650
malus_domestica	MD02G1226500.v1.1 MD07G1087500.v1.1
prunus_persica	Prupe.2G114300_v2.0.a1
pyrus_communis	pycom02g19540 pycom07g07000
rosa_chinensis	RchiOBHm_Chr1g0343681 RchiOBHm_Chr1g0343771
rosa_laevigata	RLG00000028954
rosa_multiflora	Rmu_sc0000021.1_g000003
rosa_roxburghii	Rroxscaffold_4G00310360
rosa_rugosa	Rorug01G0168300
rosa_samantha	Rh1AG184200 Rh1AG185200 Rh1BG152000 Rh1CG171100 Rh1DG183900 Rh3AG232400 Rh4CG303300 Rh6AG164500
rosa_wichuraiana	Rw0G012950 Rw1G015280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	608
AasI	GACNNNNNNGTC	1 cut(s)	776
Acc36I	ACCTGC	1 cut(s)	608
AccI	GTMKAC	1 cut(s)	1578
AccII	CGCG	1 cut(s)	317
AciI	CCGC	9 cut(s)	75, 135, 220, 315, 317, 1234, 1237, 1385, 1582
AclI	AACGTT	2 cut(s)	414, 629
AclWI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
AcoI	YGGCCR	1 cut(s)	136
AcsI	RAATTY	2 cut(s)	330, 1481
AfaI	GTAC	4 cut(s)	55, 803, 857, 1755
AfiI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
AflIII	ACRYGT	1 cut(s)	1620
AgsI	TTSAA	5 cut(s)	491, 500, 692, 953, 1312
AjnI	CCWGG	4 cut(s)	442, 1017, 1525, 1537
AjuI	GAANNNNNNNTTGG	2 cut(s)	615, 647
Alw21I	GWGCWC	3 cut(s)	63, 1059, 1808
Alw26I	GTCTC	2 cut(s)	1348, 1643
AlwI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
AlwNI	CAGNNNCTG	1 cut(s)	1190
AoxI	GGCC	6 cut(s)	48, 136, 221, 469, 977, 1522
ApeKI	GCWGC	7 cut(s)	235, 238, 1114, 1121, 1391, 1562, 1571
ApoI	RAATTY	2 cut(s)	330, 1481
AseI	ATTAAT	1 cut(s)	756
Asp700I	GAANNNNTTC	2 cut(s)	847, 1485
AspLEI	GCGC	2 cut(s)	789, 1446
AspS9I	GGNCC	5 cut(s)	48, 469, 964, 1271, 1523
AsuC2I	CCSGG	2 cut(s)	1077, 1548
AsuHPI	GGTGA	3 cut(s)	632, 649, 1094
AsuII	TTCGAA	1 cut(s)	1489
AvaII	GGWCC	2 cut(s)	964, 1271
BaeGI	GKGCMC	1 cut(s)	831
BamHI	GGATCC	1 cut(s)	610
BanII	GRGCYC	3 cut(s)	904, 1003, 1808
BbsI	GAAGAC	2 cut(s)	147, 1498
Bbv12I	GWGCWC	3 cut(s)	63, 1059, 1808
BbvCI	CCTCAGC	1 cut(s)	1278
BbvI	GCAGC	7 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558
BccI	CCATC	7 cut(s)	4, 399, 652, 955, 975, 1058, 1187
BceAI	ACGGC	4 cut(s)	88, 110, 971, 1014
BciT130I	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BciVI	GTATCC	2 cut(s)	33, 917
BcnI	CCSGG	2 cut(s)	1077, 1548
BcoDI	GTCTC	2 cut(s)	1348, 1643
BfaI	CTAG	1 cut(s)	545
BfmI	CTRYAG	2 cut(s)	981, 1575
BfuAI	ACCTGC	1 cut(s)	608
BfuI	GTATCC	2 cut(s)	33, 917
BglII	AGATCT	1 cut(s)	698
BmcAI	AGTACT	1 cut(s)	803
Bme1390I	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
Bme18I	GGWCC	2 cut(s)	964, 1271
BmgT120I	GGNCC	5 cut(s)	48, 469, 964, 1271, 1523
BmiI	GGNNCC	2 cut(s)	612, 1415
BmrFI	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
BmsI	GCATC	4 cut(s)	180, 546, 574, 1282
BoxI	GACNNNNGTC	1 cut(s)	1153
BpiI	GAAGAC	2 cut(s)	147, 1498
BplI	GAGNNNNNCTC	4 cut(s)	1740, 1772, 1742, 1774
BpmI	CTGGAG	2 cut(s)	185, 540
Bpu10I	CCTNAGC	1 cut(s)	1278
Bpu14I	TTCGAA	1 cut(s)	1489
BpuMI	CCSGG	2 cut(s)	1077, 1548
BsaBI	GATNNNNATC	2 cut(s)	1149, 1197
BsaJI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
Bsc4I	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
Bse1I	ACTGG	2 cut(s)	813, 1517
Bse3DI	GCAATG	1 cut(s)	1712
Bse8I	GATNNNNATC	2 cut(s)	1149, 1197
BseBI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BseDI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
BseGI	GGATG	5 cut(s)	343, 688, 715, 920, 1297
BseJI	GATNNNNATC	2 cut(s)	1149, 1197
BseLI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
BseMI	GCAATG	1 cut(s)	1712
BseMII	CTCAG	6 cut(s)	409, 1016, 1269, 1358, 1638, 1646
BseNI	ACTGG	2 cut(s)	813, 1517
BseSI	GKGCMC	1 cut(s)	831
BseXI	GCAGC	7 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558
BseYI	CCCAGC	1 cut(s)	995
BsgI	GTGCAG	2 cut(s)	224, 1410
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BsiHKAI	GWGCWC	3 cut(s)	63, 1059, 1808
BsiSI	CCGG	2 cut(s)	1077, 1547
BslI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
BsmAI	GTCTC	2 cut(s)	1348, 1643
BsmBI	CGTCTC	1 cut(s)	1348
BsnI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
Bsp119I	TTCGAA	1 cut(s)	1489
Bsp1286I	GDGCHC	6 cut(s)	63, 831, 904, 1003, 1059, 1808
Bsp143I	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BspACI	CCGC	9 cut(s)	75, 135, 220, 315, 317, 1234, 1237, 1385, 1582
BspANI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BspCNI	CTCAG	6 cut(s)	408, 1015, 1270, 1357, 1639, 1647
BspFNI	CGCG	1 cut(s)	317
BspLI	GGNNCC	2 cut(s)	612, 1415
BspMI	ACCTGC	1 cut(s)	608
BspPI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
BspT104I	TTCGAA	1 cut(s)	1489
BsrDI	GCAATG	1 cut(s)	1712
BsrI	ACTGG	2 cut(s)	813, 1517
BssECI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
BssMI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BssT1I	CCWWGG	2 cut(s)	719, 1671
Bst2UI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
Bst4CI	ACNGT	5 cut(s)	58, 740, 1359, 1477, 1688
Bst6I	CTCTTC	1 cut(s)	100
BstBI	TTCGAA	1 cut(s)	1489
BstC8I	GCNNGC	4 cut(s)	473, 710, 1119, 1374
BstDEI	CTNAG	8 cut(s)	395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
BstDSI	CCRYGG	1 cut(s)	315
BstEII	GGTNACC	1 cut(s)	1229
BstENI	CCTNNNNNAGG	1 cut(s)	1244
BstF5I	GGATG	5 cut(s)	343, 688, 715, 920, 1297
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	2 cut(s)	789, 1446
BstKTI	GATC	8 cut(s)	24, 203, 515, 613, 701, 1147, 1253, 1616
BstMAI	GTCTC	2 cut(s)	1348, 1643
BstMBI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BstMWI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
BstNI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BstPAI	GACNNNNGTC	1 cut(s)	1153
BstPI	GGTNACC	1 cut(s)	1229
BstSCI	CCNGG	6 cut(s)	442, 1017, 1075, 1525, 1537, 1546
BstSFI	CTRYAG	2 cut(s)	981, 1575
BstSLI	GKGCMC	1 cut(s)	831
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	7 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558
BstV2I	GAAGAC	2 cut(s)	147, 1498
BstX2I	RGATCY	2 cut(s)	610, 698
BstYI	RGATCY	2 cut(s)	610, 698
BsuI	GTATCC	2 cut(s)	33, 917
BsuRI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BtgI	CCRYGG	1 cut(s)	315
BtsCI	GGATG	5 cut(s)	343, 688, 715, 920, 1297
BtsIMutI	CAGTG	3 cut(s)	1253, 1652, 1684
BveI	ACCTGC	1 cut(s)	608
Cac8I	GCNNGC	4 cut(s)	473, 710, 1119, 1374
CaiI	CAGNNNCTG	1 cut(s)	1190
CfoI	GCGC	2 cut(s)	789, 1446
Cfr13I	GGNCC	5 cut(s)	48, 469, 964, 1271, 1523
Cfr42I	CCGCGG	1 cut(s)	318
CseI	GACGC	1 cut(s)	1001
CsiI	ACCWGGT	1 cut(s)	442
Csp6I	GTAC	4 cut(s)	54, 802, 856, 1754
CviAII	CATG	3 cut(s)	505, 772, 1456
CviQI	GTAC	4 cut(s)	54, 802, 856, 1754
DdeI	CTNAG	8 cut(s)	395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
DpnI	GATC	8 cut(s)	23, 202, 514, 612, 700, 1146, 1252, 1615
DpnII	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
DraI	TTTAAA	1 cut(s)	1051
DrdI	GACNNNNNNGTC	1 cut(s)	776
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	1 cut(s)	136
Eam1104I	CTCTTC	1 cut(s)	100
EarI	CTCTTC	1 cut(s)	100
Ecl136II	GAGCTC	1 cut(s)	1806
Eco130I	CCWWGG	2 cut(s)	719, 1671
Eco147I	AGGCCT	1 cut(s)	979
Eco24I	GRGCYC	3 cut(s)	904, 1003, 1808
Eco32I	GATATC	2 cut(s)	375, 571
Eco47I	GGWCC	2 cut(s)	964, 1271
Eco53kI	GAGCTC	1 cut(s)	1806
Eco91I	GGTNACC	1 cut(s)	1229
EcoICRI	GAGCTC	1 cut(s)	1806
EcoNI	CCTNNNNNAGG	1 cut(s)	1244
EcoO109I	RGGNCCY	1 cut(s)	48
EcoO65I	GGTNACC	1 cut(s)	1229
EcoRI	GAATTC	1 cut(s)	1481
EcoRII	CCWGG	4 cut(s)	442, 1017, 1525, 1537
EcoRV	GATATC	2 cut(s)	375, 571
EcoT14I	CCWWGG	2 cut(s)	719, 1671
EcoT38I	GRGCYC	3 cut(s)	904, 1003, 1808
ErhI	CCWWGG	2 cut(s)	719, 1671
Esp3I	CGTCTC	1 cut(s)	1348
FaeI	CATG	3 cut(s)	508, 775, 1459
FatI	CATG	3 cut(s)	504, 771, 1455
FauI	CCCGC	1 cut(s)	1378
FblI	GTMKAC	1 cut(s)	1578
FokI	GGATG	5 cut(s)	350, 695, 702, 907, 1304
FriOI	GRGCYC	3 cut(s)	904, 1003, 1808
FspBI	CTAG	1 cut(s)	545
GlaI	GCGC	2 cut(s)	788, 1445
GsaI	CCCAGC	1 cut(s)	999
GsuI	CTGGAG	2 cut(s)	185, 540
HaeIII	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
HapII	CCGG	2 cut(s)	1077, 1547
HgaI	GACGC	1 cut(s)	1001
HhaI	GCGC	2 cut(s)	789, 1446
Hin1II	CATG	3 cut(s)	508, 775, 1459
Hin6I	GCGC	2 cut(s)	787, 1444
HinP1I	GCGC	2 cut(s)	787, 1444
HincII	GTYRAC	2 cut(s)	991, 1437
HindII	GTYRAC	2 cut(s)	991, 1437
HindIII	AAGCTT	2 cut(s)	647, 1133
HinfI	GANTC	5 cut(s)	887, 953, 1366, 1460, 1666
HpaII	CCGG	2 cut(s)	1077, 1547
HphI	GGTGA	3 cut(s)	632, 649, 1094
Hpy166II	GTNNAC	9 cut(s)	421, 623, 736, 991, 1300, 1437, 1453, 1579, 1684
Hpy188III	TCNNGA	4 cut(s)	335, 818, 1309, 1346
Hpy8I	GTNNAC	9 cut(s)	421, 623, 736, 991, 1300, 1437, 1453, 1579, 1684
Hpy99I	CGWCG	3 cut(s)	10, 131, 134
HpyAV	CCTTC	4 cut(s)	248, 319, 354, 686
HpyCH4III	ACNGT	5 cut(s)	58, 740, 1359, 1477, 1688
HpyCH4IV	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
HpyCH4V	TGCA	9 cut(s)	235, 241, 599, 712, 809, 1034, 1162, 1372, 1391
HpyF10VI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
HpyF3I	CTNAG	8 cut(s)	395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
HpySE526I	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
Hsp92II	CATG	3 cut(s)	508, 775, 1459
HspAI	GCGC	2 cut(s)	787, 1444
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
LmnI	GCTCC	1 cut(s)	1803
Lsp1109I	GCAGC	7 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558
LweI	GCATC	4 cut(s)	180, 546, 574, 1282
MabI	ACCWGGT	1 cut(s)	442
MaeI	CTAG	1 cut(s)	545
MaeII	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
MaeIII	GTNAC	6 cut(s)	182, 211, 352, 873, 1229, 1595
MalI	GATC	8 cut(s)	23, 202, 514, 612, 700, 1146, 1252, 1615
MboI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
MboII	GAAGA	9 cut(s)	87, 147, 182, 263, 272, 309, 503, 708, 1503
MflI	RGATCY	2 cut(s)	610, 698
MhlI	GDGCHC	6 cut(s)	63, 831, 904, 1003, 1059, 1808
MluCI	AATT	7 cut(s)	330, 432, 549, 894, 1258, 1349, 1481
MlyI	GAGTC	2 cut(s)	896, 1375
MmeI	TCCRAC	1 cut(s)	706
MroXI	GAANNNNTTC	2 cut(s)	847, 1485
MseI	TTAA	4 cut(s)	33, 756, 930, 1050
MslI	CAYNNNNRTG	1 cut(s)	1062
MspA1I	CMGCKG	5 cut(s)	238, 317, 1114, 1277, 1562
MspI	CCGG	2 cut(s)	1077, 1547
MspR9I	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
MvaI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
NciI	CCSGG	2 cut(s)	1077, 1548
NdeII	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
NlaIII	CATG	3 cut(s)	508, 775, 1459
NlaIV	GGNNCC	2 cut(s)	612, 1415
NmeAIII	GCCGAG	2 cut(s)	42, 298
NmuCI	GTSAC	4 cut(s)	182, 211, 873, 1595
NspV	TTCGAA	1 cut(s)	1489
PaqCI	CACCTGC	1 cut(s)	608
PceI	AGGCCT	1 cut(s)	979
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PdmI	GAANNNNTTC	2 cut(s)	847, 1485
PfeI	GAWTC	3 cut(s)	953, 1460, 1666
PfoI	TCCNGGA	1 cut(s)	1017
PleI	GAGTC	2 cut(s)	895, 1374
PpsI	GAGTC	2 cut(s)	895, 1374
PshAI	GACNNNNGTC	1 cut(s)	1153
PshBI	ATTAAT	1 cut(s)	756
Psp124BI	GAGCTC	1 cut(s)	1808
Psp1406I	AACGTT	2 cut(s)	414, 629
Psp6I	CCWGG	4 cut(s)	442, 1017, 1525, 1537
PspEI	GGTNACC	1 cut(s)	1229
PspFI	CCCAGC	1 cut(s)	995
PspGI	CCWGG	4 cut(s)	442, 1017, 1525, 1537
PspN4I	GGNNCC	2 cut(s)	612, 1415
PspPI	GGNCC	5 cut(s)	48, 469, 964, 1271, 1523
PstNI	CAGNNNCTG	1 cut(s)	1190
PsuI	RGATCY	2 cut(s)	610, 698
PvuII	CAGCTG	4 cut(s)	238, 1114, 1277, 1562
RsaI	GTAC	4 cut(s)	55, 803, 857, 1755
RsaNI	GTAC	4 cut(s)	54, 802, 856, 1754
RseI	CAYNNNNRTG	1 cut(s)	1062
SacI	GAGCTC	1 cut(s)	1808
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	4 cut(s)	33, 756, 930, 1050
Sau3AI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
Sau96I	GGNCC	5 cut(s)	48, 469, 964, 1271, 1523
ScaI	AGTACT	1 cut(s)	803
SchI	GAGTC	2 cut(s)	896, 1375
ScrFI	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
SduI	GDGCHC	6 cut(s)	63, 831, 904, 1003, 1059, 1808
SexAI	ACCWGGT	1 cut(s)	442
SfaNI	GCATC	4 cut(s)	180, 546, 574, 1282
SfcI	CTRYAG	2 cut(s)	981, 1575
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	1489
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	2 cut(s)	964, 1271
SmiMI	CAYNNNNRTG	1 cut(s)	1062
Sse9I	AATT	7 cut(s)	330, 432, 549, 894, 1258, 1349, 1481
SseBI	AGGCCT	1 cut(s)	979
SsiI	CCGC	9 cut(s)	75, 135, 220, 315, 317, 1234, 1237, 1385, 1582
SspI	AATATT	1 cut(s)	1047
SspMI	CTAG	1 cut(s)	545
SstI	GAGCTC	1 cut(s)	1808
StuI	AGGCCT	1 cut(s)	979
StyD4I	CCNGG	6 cut(s)	442, 1017, 1075, 1525, 1537, 1546
StyI	CCWWGG	2 cut(s)	719, 1671
TaaI	ACNGT	5 cut(s)	58, 740, 1359, 1477, 1688
TaiI	ACGT	5 cut(s)	417, 632, 799, 1623, 1712
TaqI	TCGA	4 cut(s)	511, 1147, 1489, 1616
TaqII	GACCGA	1 cut(s)	1056
TasI	AATT	7 cut(s)	330, 432, 549, 894, 1258, 1349, 1481
TatI	WGTACW	1 cut(s)	801
TauI	GCSGC	3 cut(s)	138, 223, 1239
TfiI	GAWTC	3 cut(s)	953, 1460, 1666
Tru1I	TTAA	4 cut(s)	33, 756, 930, 1050
Tru9I	TTAA	4 cut(s)	33, 756, 930, 1050
TscAI	CASTG	3 cut(s)	1260, 1659, 1691
TseFI	GTSAC	4 cut(s)	182, 211, 873, 1595
TseI	GCWGC	7 cut(s)	235, 238, 1114, 1121, 1391, 1562, 1571
Tsp45I	GTSAC	4 cut(s)	182, 211, 873, 1595
TspDTI	ATGAA	4 cut(s)	272, 354, 960, 1413
TspGWI	ACGGA	3 cut(s)	263, 782, 1406
TspRI	CASTG	3 cut(s)	1260, 1659, 1691
VpaK11BI	GGWCC	2 cut(s)	964, 1271
VspI	ATTAAT	1 cut(s)	756
XagI	CCTNNNNNAGG	1 cut(s)	1244
XapI	RAATTY	2 cut(s)	330, 1481
XmiI	GTMKAC	1 cut(s)	1578
XmnI	GAANNNNTTC	2 cut(s)	847, 1485
XspI	CTAG	1 cut(s)	545
ZrmI	AGTACT	1 cut(s)	803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.