Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0005573

Physical Location & Seq

Genomic Coordinates Forward (+)

35067951 .. 35075108

Gene Structure 7158 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG184200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGTTAATTCTATCAAGACCAAGAGGGCCTGTACTGTGCTCGGCGACTACGGCGGTGGCGACAACACTTTCTCTTCCTTGTGGGAAGCTCTGCCCTCTGTTGCCGTCGTCGGCGGCCAGAGTTCGGGCAAGTCTTCGGTGCTGGAGAGCATTGTAGGGCGTGACTTTCTTCCCAGAGGATCAGGGATTGTGACGAGGCGGCCTTTGGTGTTGCAGCTCCACAAGACGGACGAAGGGACTCAGGAGTATGCCGAGTTTCTTCATCTCTCCAAGAGAAGATTTACTGATTTCTCCGCGGTTCGGAAGGAAATTCAGGATGAAACTGATAGAGTAACAGGAAGGTCAAAAATGATATCTCCTGTTCCTATCCATCTCAGTATCTACTCCCCCAACGTTGTGAACTTGACCCTAATTGATTTACCTGGTTTGACGAAAGTTGCTGTTGAGGGCCAGCCTGAAAGTATCGTTGAAGATATTGAAAACATGGTTCGATCTTATGTTGAGAAGCCTAATAGCATCATACTAGCAATATCTCCAGCCAACCAAGATATCGCTACATCTGATGCTATCAAACTTGCACGGGAAGTGGATCCAGCAGGTGAACGAACGTTTGGGGTGATGACAAAGCTTGATTTGATGGACAAAGGAACTAATGCTTTGGATGTTATCGAAGGAAGATCTTATCGCCTGCAACAGCCTTGGGTTGGAGTTGTGAACCGTTCCCAAGCAGATATTAATAAAAATACGGACATGATTGTCGCAAGGCGCAAGGAACGTGAGTACTTTGCAACCAGTCCTGACTATGGGCACTTGGCTAATAGAATGGGTTCAGAGTACCTTGCTAAACTTCTGTCACAGCACTTGGAGTCTGTAATTAGGGCTCGTATCCCAAGTATCACATCCTTGATTAACAAAACCATTGATGAACTTGAATCCGAGATGGACCATCTTGGTAGGCCTATAGCTGTTGACGCTGGGGCTCAGTTATACACTATACTGGAACTTTGCCGTGCATTTGACCGAATATTTAAAGAGCACTTAGATGGAGGGCGACCCGGAGGTGATAGGATTTATGGTGTCTTTGACAACCAGCTGCCTGCTGCTTTGAGGAAGCTTCCATTTGATCGACATCTGTCTATGCAGAATGTAAAGAAAGTGGTTTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGTCTTATTGAGGGATCACTGAATTACTTTAGAGGTCCAGCTGAGGCTTCTGTGGATGCTGTCCACTTTGTCTTGAAAGAACTCGTGAGGAAGTCATTAGCAGAAACTCAGGAATTGAGACGGTTTCCGACTCTGCAAGCTGAAATAGCGGGTGCAGCTAATGAAGCATTGGAAAGGTTCCGTGATGAGAGTAAGAAGTCAACTCTGCGCTTAGTGGACATGGAATCCTCATACTTGACTGTGGAATTCTTTCGAAGACTTCCACAGGAAGTGGAGAAACCAGTTGGCCCAGGAGGAAAACCAGGACACCCGGGAGGAAATCCAGCTGCCAATGCTGCTGTGGACCGCTATTCAGAGGGTCACTTTCGGAGGATAGGATCGAACGTGTCCTCTTATGTGGGAATGGTGTCTGAGACACTGAGGAATACGATTCCCAAGGCTGTCGTTCACTGTCAAGTCAGGGAGGCAAAAACGTCGTTGCTAAATCACTTCTATATACAAATAGGAAAGAGAGAGGGTAAGCAGTTAGGTCAGCTGCTTGACGAAGACCCAGCATTGATGGAGAGGAGGCTACAGTGTGCTAAAAGGCTTGAATTATACAAGTCAGCTAGGGATGAGGTTGATTCTGTATCATGGGTCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

619

Amino Acids

69.02

Weight (kDa)

7.71

Isoelectric Point (pI)

45.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	34 - 210	1.1e-55	Dynamin family
Dynamin_M	PF01031	218 - 485	4.2e-62	Dynamin central region
GED	PF02212	523 - 615	9.8e-24	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44590 AT2G44590 AT2G44590 AT3G60190
fragaria_vesca	FvH4_7g08650 FvH4_7g08650 FvH4_7g08650
malus_domestica	MD02G1226500.v1.1 MD07G1087500.v1.1
prunus_persica	Prupe.2G114300_v2.0.a1
pyrus_communis	pycom02g19540 pycom07g07000
rosa_chinensis	RchiOBHm_Chr1g0343681 RchiOBHm_Chr1g0343771
rosa_laevigata	RLG00000028954
rosa_multiflora	Rmu_sc0000021.1_g000003
rosa_roxburghii	Rroxscaffold_4G00310360
rosa_rugosa	Rorug01G0168300
rosa_samantha	Rh1AG184200 Rh1AG185200 Rh1BG152000 Rh1CG171100 Rh1DG183900 Rh3AG232400 Rh4CG303300 Rh6AG164500
rosa_wichuraiana	Rw0G012950 Rw1G015280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	587
AasI	GACNNNNNNGTC	1 cut(s)	755
Acc36I	ACCTGC	1 cut(s)	587
AccII	CGCG	1 cut(s)	296
AciI	CCGC	8 cut(s)	54, 114, 199, 294, 296, 1364, 1561, 1855
AclI	AACGTT	2 cut(s)	393, 608
AclWI	GGATC	5 cut(s)	187, 584, 597, 1237, 1600
AcoI	YGGCCR	1 cut(s)	115
AcsI	RAATTY	2 cut(s)	309, 1460
AcyI	GRCGYC	1 cut(s)	1216
AfaI	GTAC	3 cut(s)	34, 782, 836
AfiI	CCNNNNNNNGG	6 cut(s)	124, 226, 300, 704, 803, 1205
AflIII	ACRYGT	1 cut(s)	1599
AgsI	TTSAA	5 cut(s)	470, 479, 932, 1291, 1808
AjnI	CCWGG	3 cut(s)	421, 1504, 1516
AjuI	GAANNNNNNNTTGG	2 cut(s)	594, 626
Alw21I	GWGCWC	2 cut(s)	42, 1038
Alw26I	GTCTC	2 cut(s)	1327, 1622
AlwI	GGATC	5 cut(s)	187, 584, 597, 1237, 1600
AlwNI	CAGNNNCTG	1 cut(s)	1169
Ama87I	CYCGRG	1 cut(s)	1525
AoxI	GGCC	6 cut(s)	27, 115, 200, 448, 956, 1501
ApeKI	GCWGC	7 cut(s)	214, 1093, 1100, 1370, 1541, 1550, 1750
ApoI	RAATTY	2 cut(s)	309, 1460
AseI	ATTAAT	1 cut(s)	735
Asp700I	GAANNNNTTC	2 cut(s)	826, 1464
AspLEI	GCGC	2 cut(s)	768, 1425
AspS9I	GGNCC	7 cut(s)	27, 448, 943, 1250, 1502, 1558, 1852
AsuC2I	CCSGG	3 cut(s)	1056, 1526, 1527
AsuHPI	GGTGA	3 cut(s)	611, 628, 1073
AsuII	TTCGAA	1 cut(s)	1468
AvaI	CYCGRG	1 cut(s)	1525
AvaII	GGWCC	4 cut(s)	943, 1250, 1558, 1852
BaeGI	GKGCMC	1 cut(s)	810
BamHI	GGATCC	1 cut(s)	589
BanII	GRGCYC	2 cut(s)	883, 982
BauI	CACGAG	1 cut(s)	1298
BbsI	GAAGAC	3 cut(s)	126, 1477, 1767
Bbv12I	GWGCWC	2 cut(s)	42, 1038
BbvCI	CCTCAGC	1 cut(s)	1257
BbvI	GCAGC	7 cut(s)	226, 1080, 1087, 1382, 1528, 1537, 1737
BccI	CCATC	7 cut(s)	378, 631, 934, 954, 1037, 1166, 1768
BceAI	ACGGC	3 cut(s)	67, 89, 993
BcgI	CGANNNNNNTGC	2 cut(s)	1671, 1705
BciT130I	CCWGG	3 cut(s)	423, 1506, 1518
BciVI	GTATCC	1 cut(s)	896
BcnI	CCSGG	3 cut(s)	1056, 1526, 1527
BcoDI	GTCTC	2 cut(s)	1327, 1622
BfaI	CTAG	2 cut(s)	524, 1824
BfmI	CTRYAG	2 cut(s)	960, 1787
BfuAI	ACCTGC	1 cut(s)	587
BfuI	GTATCC	1 cut(s)	896
BglII	AGATCT	1 cut(s)	677
BisI	GCNGC	9 cut(s)	115, 200, 215, 1094, 1101, 1371, 1542, 1551, 1751
BlsI	GCNGC	9 cut(s)	116, 201, 216, 1095, 1102, 1372, 1543, 1552, 1752
BmcAI	AGTACT	1 cut(s)	782
Bme1390I	CCNGG	6 cut(s)	423, 1056, 1506, 1518, 1526, 1527
Bme18I	GGWCC	4 cut(s)	943, 1250, 1558, 1852
BmeT110I	CYCGRG	1 cut(s)	1525
BmgT120I	GGNCC	7 cut(s)	27, 448, 943, 1250, 1502, 1558, 1852
BmiI	GGNNCC	3 cut(s)	591, 1394, 1853
BmrFI	CCNGG	6 cut(s)	423, 1056, 1506, 1518, 1526, 1527
BmsI	GCATC	3 cut(s)	525, 553, 1261
BoxI	GACNNNNGTC	1 cut(s)	1132
BpiI	GAAGAC	3 cut(s)	126, 1477, 1767
BpmI	CTGGAG	2 cut(s)	164, 519
Bpu10I	CCTNAGC	1 cut(s)	1257
Bpu14I	TTCGAA	1 cut(s)	1468
BpuMI	CCSGG	3 cut(s)	1056, 1526, 1527
BsaBI	GATNNNNATC	2 cut(s)	1128, 1176
BsaHI	GRCGYC	1 cut(s)	1216
BsaJI	CCNNGG	5 cut(s)	294, 698, 1504, 1525, 1650
Bsc4I	CCNNNNNNNGG	6 cut(s)	124, 226, 300, 704, 803, 1205
Bse118I	RCCGGY	1 cut(s)	1212
Bse1I	ACTGG	3 cut(s)	792, 1002, 1496
Bse8I	GATNNNNATC	2 cut(s)	1128, 1176
BseBI	CCWGG	3 cut(s)	423, 1506, 1518
BseDI	CCNNGG	5 cut(s)	294, 698, 1504, 1525, 1650
BseGI	GGATG	5 cut(s)	322, 667, 899, 1276, 1834
BseJI	GATNNNNATC	2 cut(s)	1128, 1176
BseLI	CCNNNNNNNGG	6 cut(s)	124, 226, 300, 704, 803, 1205
BseMII	CTCAG	7 cut(s)	254, 388, 995, 1248, 1337, 1617, 1625
BseNI	ACTGG	3 cut(s)	792, 1002, 1496
BseRI	GAGGAG	1 cut(s)	1795
BseSI	GKGCMC	1 cut(s)	810
BseXI	GCAGC	7 cut(s)	226, 1080, 1087, 1382, 1528, 1537, 1737
BseYI	CCCAGC	2 cut(s)	974, 1765
BsgI	GTGCAG	1 cut(s)	1389
Bsh1236I	CGCG	1 cut(s)	296
BshFI	GGCC	6 cut(s)	29, 117, 202, 450, 958, 1503
BsiHKAI	GWGCWC	2 cut(s)	42, 1038
BsiHKCI	CYCGRG	1 cut(s)	1525
BsiSI	CCGG	3 cut(s)	1056, 1213, 1526
BslFI	GGGAC	1 cut(s)	250
BslI	CCNNNNNNNGG	6 cut(s)	124, 226, 300, 704, 803, 1205
BsmAI	GTCTC	2 cut(s)	1327, 1622
BsmBI	CGTCTC	1 cut(s)	1327
BsmFI	GGGAC	1 cut(s)	250
BsnI	GGCC	6 cut(s)	29, 117, 202, 450, 958, 1503
BsoBI	CYCGRG	1 cut(s)	1525
Bsp119I	TTCGAA	1 cut(s)	1468
Bsp1286I	GDGCHC	5 cut(s)	42, 810, 883, 982, 1038
Bsp143I	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
BspACI	CCGC	8 cut(s)	54, 114, 199, 294, 296, 1364, 1561, 1855
BspANI	GGCC	6 cut(s)	29, 117, 202, 450, 958, 1503
BspCNI	CTCAG	7 cut(s)	253, 387, 994, 1249, 1336, 1618, 1626
BspFNI	CGCG	1 cut(s)	296
BspLI	GGNNCC	3 cut(s)	591, 1394, 1853
BspMI	ACCTGC	1 cut(s)	587
BspPI	GGATC	5 cut(s)	187, 584, 597, 1237, 1600
BspT104I	TTCGAA	1 cut(s)	1468
BsrFI	RCCGGY	1 cut(s)	1212
BsrI	ACTGG	3 cut(s)	792, 1002, 1496
BssAI	RCCGGY	1 cut(s)	1212
BssECI	CCNNGG	5 cut(s)	294, 698, 1504, 1525, 1650
BssMI	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
BssNI	GRCGYC	1 cut(s)	1216
BssSI	CACGAG	1 cut(s)	1298
BssT1I	CCWWGG	2 cut(s)	698, 1650
Bst2BI	CACGAG	1 cut(s)	1298
Bst2UI	CCWGG	3 cut(s)	423, 1506, 1518
Bst4CI	ACNGT	6 cut(s)	37, 719, 1338, 1456, 1667, 1791
Bst6I	CTCTTC	1 cut(s)	79
BstACI	GRCGYC	1 cut(s)	1216
BstBI	TTCGAA	1 cut(s)	1468
BstC8I	GCNNGC	4 cut(s)	452, 689, 1098, 1353
BstDEI	CTNAG	9 cut(s)	240, 374, 981, 1039, 1257, 1323, 1426, 1626, 1634
BstDSI	CCRYGG	1 cut(s)	294
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	5 cut(s)	322, 667, 899, 1276, 1834
BstFNI	CGCG	1 cut(s)	296
BstHHI	GCGC	2 cut(s)	768, 1425
BstKTI	GATC	7 cut(s)	182, 494, 592, 680, 1126, 1232, 1595
BstMAI	GTCTC	2 cut(s)	1327, 1622
BstMBI	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
BstMWI	GCNNNNNNNGC	7 cut(s)	51, 971, 1361, 1370, 1379, 1547, 1550
BstNI	CCWGG	3 cut(s)	423, 1506, 1518
BstPAI	GACNNNNGTC	1 cut(s)	1132
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	6 cut(s)	421, 1054, 1504, 1516, 1524, 1525
BstSFI	CTRYAG	2 cut(s)	960, 1787
BstSLI	GKGCMC	1 cut(s)	810
BstUI	CGCG	1 cut(s)	296
BstV1I	GCAGC	7 cut(s)	226, 1080, 1087, 1382, 1528, 1537, 1737
BstV2I	GAAGAC	3 cut(s)	126, 1477, 1767
BstX2I	RGATCY	2 cut(s)	589, 677
BstYI	RGATCY	2 cut(s)	589, 677
BsuI	GTATCC	1 cut(s)	896
BsuRI	GGCC	6 cut(s)	29, 117, 202, 450, 958, 1503
BtgI	CCRYGG	1 cut(s)	294
BtsCI	GGATG	5 cut(s)	322, 667, 899, 1276, 1834
BtsIMutI	CAGTG	4 cut(s)	1232, 1631, 1663, 1796
BveI	ACCTGC	1 cut(s)	587
Cac8I	GCNNGC	4 cut(s)	452, 689, 1098, 1353
CaiI	CAGNNNCTG	1 cut(s)	1169
CfoI	GCGC	2 cut(s)	768, 1425
Cfr10I	RCCGGY	1 cut(s)	1212
Cfr13I	GGNCC	7 cut(s)	27, 448, 943, 1250, 1502, 1558, 1852
Cfr42I	CCGCGG	1 cut(s)	297
Cfr9I	CCCGGG	1 cut(s)	1525
CseI	GACGC	2 cut(s)	980, 1205
CsiI	ACCWGGT	1 cut(s)	421
Csp6I	GTAC	3 cut(s)	33, 781, 835
CviAII	CATG	4 cut(s)	484, 751, 1435, 1848
CviQI	GTAC	3 cut(s)	33, 781, 835
DdeI	CTNAG	9 cut(s)	240, 374, 981, 1039, 1257, 1323, 1426, 1626, 1634
DpnI	GATC	7 cut(s)	181, 493, 591, 679, 1125, 1231, 1594
DpnII	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
DraI	TTTAAA	1 cut(s)	1030
DrdI	GACNNNNNNGTC	1 cut(s)	755
DseDI	GACNNNNNNGTC	1 cut(s)	755
EaeI	YGGCCR	1 cut(s)	115
Eam1104I	CTCTTC	1 cut(s)	79
EarI	CTCTTC	1 cut(s)	79
Eco130I	CCWWGG	2 cut(s)	698, 1650
Eco147I	AGGCCT	1 cut(s)	958
Eco24I	GRGCYC	2 cut(s)	883, 982
Eco32I	GATATC	2 cut(s)	354, 550
Eco47I	GGWCC	4 cut(s)	943, 1250, 1558, 1852
Eco88I	CYCGRG	1 cut(s)	1525
Eco91I	GGTNACC	1 cut(s)	1208
EcoO109I	RGGNCCY	1 cut(s)	27
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRI	GAATTC	1 cut(s)	1460
EcoRII	CCWGG	3 cut(s)	421, 1504, 1516
EcoRV	GATATC	2 cut(s)	354, 550
EcoT14I	CCWWGG	2 cut(s)	698, 1650
EcoT38I	GRGCYC	2 cut(s)	883, 982
ErhI	CCWWGG	2 cut(s)	698, 1650
Esp3I	CGTCTC	1 cut(s)	1327
FaeI	CATG	4 cut(s)	487, 754, 1438, 1851
FaqI	GGGAC	1 cut(s)	250
FatI	CATG	4 cut(s)	483, 750, 1434, 1847
FauI	CCCGC	1 cut(s)	1357
Fnu4HI	GCNGC	9 cut(s)	115, 200, 215, 1094, 1101, 1371, 1542, 1551, 1751
FokI	GGATG	5 cut(s)	329, 674, 886, 1283, 1841
FriOI	GRGCYC	2 cut(s)	883, 982
Fsp4HI	GCNGC	9 cut(s)	115, 200, 215, 1094, 1101, 1371, 1542, 1551, 1751
FspBI	CTAG	2 cut(s)	524, 1824
GlaI	GCGC	2 cut(s)	767, 1424
GluI	GCNGC	9 cut(s)	115, 200, 215, 1094, 1101, 1371, 1542, 1551, 1751
GsaI	CCCAGC	2 cut(s)	978, 1769
GsuI	CTGGAG	2 cut(s)	164, 519
HaeIII	GGCC	6 cut(s)	29, 117, 202, 450, 958, 1503
HapII	CCGG	3 cut(s)	1056, 1213, 1526
HgaI	GACGC	2 cut(s)	980, 1205
HhaI	GCGC	2 cut(s)	768, 1425
Hin1I	GRCGYC	1 cut(s)	1216
Hin1II	CATG	4 cut(s)	487, 754, 1438, 1851
Hin6I	GCGC	2 cut(s)	766, 1423
HinP1I	GCGC	2 cut(s)	766, 1423
HincII	GTYRAC	2 cut(s)	970, 1416
HindII	GTYRAC	2 cut(s)	970, 1416
HindIII	AAGCTT	2 cut(s)	626, 1112
HinfI	GANTC	7 cut(s)	238, 866, 932, 1345, 1439, 1645, 1838
HpaII	CCGG	3 cut(s)	1056, 1213, 1526
HphI	GGTGA	3 cut(s)	611, 628, 1073
Hpy166II	GTNNAC	9 cut(s)	400, 602, 715, 970, 1279, 1416, 1432, 1558, 1663
Hpy188I	TCNGA	9 cut(s)	303, 562, 832, 937, 1165, 1344, 1570, 1584, 1627
Hpy188III	TCNNGA	7 cut(s)	16, 242, 314, 797, 1288, 1300, 1325
Hpy8I	GTNNAC	9 cut(s)	400, 602, 715, 970, 1279, 1416, 1432, 1558, 1663
Hpy99I	CGWCG	3 cut(s)	110, 113, 1693
HpyAV	CCTTC	4 cut(s)	227, 298, 333, 665
HpyCH4III	ACNGT	6 cut(s)	37, 719, 1338, 1456, 1667, 1791
HpyCH4IV	ACGT	5 cut(s)	393, 608, 775, 1599, 1688
HpyCH4V	TGCA	8 cut(s)	214, 578, 691, 788, 1013, 1141, 1351, 1370
HpyF10VI	GCNNNNNNNGC	7 cut(s)	51, 971, 1361, 1370, 1379, 1547, 1550
HpyF3I	CTNAG	9 cut(s)	240, 374, 981, 1039, 1257, 1323, 1426, 1626, 1634
HpySE526I	ACGT	5 cut(s)	393, 608, 775, 1599, 1688
Hsp92I	GRCGYC	1 cut(s)	1216
Hsp92II	CATG	4 cut(s)	487, 754, 1438, 1851
HspAI	GCGC	2 cut(s)	766, 1423
KspI	CCGCGG	1 cut(s)	297
Kzo9I	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
LmnI	GCTCC	1 cut(s)	222
Lsp1109I	GCAGC	7 cut(s)	226, 1080, 1087, 1382, 1528, 1537, 1737
LweI	GCATC	3 cut(s)	525, 553, 1261
MabI	ACCWGGT	1 cut(s)	421
MaeI	CTAG	2 cut(s)	524, 1824
MaeII	ACGT	5 cut(s)	393, 608, 775, 1599, 1688
MaeIII	GTNAC	6 cut(s)	161, 190, 331, 852, 1208, 1574
MalI	GATC	7 cut(s)	181, 493, 591, 679, 1125, 1231, 1594
MboI	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
MboII	GAAGA	9 cut(s)	66, 126, 161, 251, 288, 482, 687, 1482, 1772
MflI	RGATCY	2 cut(s)	589, 677
MhlI	GDGCHC	5 cut(s)	42, 810, 883, 982, 1038
MluCI	AATT	8 cut(s)	7, 309, 411, 873, 1237, 1328, 1460, 1808
MlyI	GAGTC	3 cut(s)	232, 875, 1339
MmeI	TCCRAC	2 cut(s)	685, 1367
MroXI	GAANNNNTTC	2 cut(s)	826, 1464
MseI	TTAA	4 cut(s)	6, 735, 909, 1029
MslI	CAYNNNNRTG	1 cut(s)	1041
MspA1I	CMGCKG	6 cut(s)	296, 1093, 1256, 1541, 1750, 1857
MspI	CCGG	3 cut(s)	1056, 1213, 1526
MspR9I	CCNGG	6 cut(s)	423, 1056, 1506, 1518, 1526, 1527
MvaI	CCWGG	3 cut(s)	423, 1506, 1518
MvnI	CGCG	1 cut(s)	296
MwoI	GCNNNNNNNGC	7 cut(s)	51, 971, 1361, 1370, 1379, 1547, 1550
NciI	CCSGG	3 cut(s)	1056, 1526, 1527
NdeII	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
NlaIII	CATG	4 cut(s)	487, 754, 1438, 1851
NlaIV	GGNNCC	3 cut(s)	591, 1394, 1853
NmeAIII	GCCGAG	2 cut(s)	21, 277
NmuCI	GTSAC	4 cut(s)	161, 190, 852, 1574
NspV	TTCGAA	1 cut(s)	1468
PaqCI	CACCTGC	1 cut(s)	587
PceI	AGGCCT	1 cut(s)	958
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PdmI	GAANNNNTTC	2 cut(s)	826, 1464
PfeI	GAWTC	4 cut(s)	932, 1439, 1645, 1838
PkrI	GCNGC	9 cut(s)	116, 201, 216, 1095, 1102, 1372, 1543, 1552, 1752
PleI	GAGTC	3 cut(s)	232, 874, 1339
PpsI	GAGTC	3 cut(s)	232, 874, 1339
PshAI	GACNNNNGTC	1 cut(s)	1132
PshBI	ATTAAT	1 cut(s)	735
Psp1406I	AACGTT	2 cut(s)	393, 608
Psp6I	CCWGG	3 cut(s)	421, 1504, 1516
PspEI	GGTNACC	1 cut(s)	1208
PspFI	CCCAGC	2 cut(s)	974, 1765
PspGI	CCWGG	3 cut(s)	421, 1504, 1516
PspN4I	GGNNCC	3 cut(s)	591, 1394, 1853
PspPI	GGNCC	7 cut(s)	27, 448, 943, 1250, 1502, 1558, 1852
PstNI	CAGNNNCTG	1 cut(s)	1169
PsuI	RGATCY	2 cut(s)	589, 677
PvuII	CAGCTG	4 cut(s)	1093, 1256, 1541, 1750
RsaI	GTAC	3 cut(s)	34, 782, 836
RsaNI	GTAC	3 cut(s)	33, 781, 835
RseI	CAYNNNNRTG	1 cut(s)	1041
SacII	CCGCGG	1 cut(s)	297
SaqAI	TTAA	4 cut(s)	6, 735, 909, 1029
SatI	GCNGC	9 cut(s)	115, 200, 215, 1094, 1101, 1371, 1542, 1551, 1751
Sau3AI	GATC	7 cut(s)	179, 491, 589, 677, 1123, 1229, 1592
Sau96I	GGNCC	7 cut(s)	27, 448, 943, 1250, 1502, 1558, 1852
ScaI	AGTACT	1 cut(s)	782
SchI	GAGTC	3 cut(s)	232, 875, 1339
ScrFI	CCNGG	6 cut(s)	423, 1056, 1506, 1518, 1526, 1527
SduI	GDGCHC	5 cut(s)	42, 810, 883, 982, 1038
SexAI	ACCWGGT	1 cut(s)	421
SfaNI	GCATC	3 cut(s)	525, 553, 1261
SfcI	CTRYAG	2 cut(s)	960, 1787
Sfr303I	CCGCGG	1 cut(s)	297
SfuI	TTCGAA	1 cut(s)	1468
SgrBI	CCGCGG	1 cut(s)	297
SinI	GGWCC	4 cut(s)	943, 1250, 1558, 1852
SmaI	CCCGGG	1 cut(s)	1527
SmiMI	CAYNNNNRTG	1 cut(s)	1041
Sse9I	AATT	8 cut(s)	7, 309, 411, 873, 1237, 1328, 1460, 1808
SseBI	AGGCCT	1 cut(s)	958
SsiI	CCGC	8 cut(s)	54, 114, 199, 294, 296, 1364, 1561, 1855
SspI	AATATT	1 cut(s)	1026
SspMI	CTAG	2 cut(s)	524, 1824
StuI	AGGCCT	1 cut(s)	958
StyD4I	CCNGG	6 cut(s)	421, 1054, 1504, 1516, 1524, 1525
StyI	CCWWGG	2 cut(s)	698, 1650
TaaI	ACNGT	6 cut(s)	37, 719, 1338, 1456, 1667, 1791
TaiI	ACGT	5 cut(s)	396, 611, 778, 1602, 1691
TaqI	TCGA	5 cut(s)	490, 669, 1126, 1468, 1595
TaqII	GACCGA	1 cut(s)	1035
TasI	AATT	8 cut(s)	7, 309, 411, 873, 1237, 1328, 1460, 1808
TatI	WGTACW	2 cut(s)	32, 780
TauI	GCSGC	2 cut(s)	117, 202
TfiI	GAWTC	4 cut(s)	932, 1439, 1645, 1838
Tru1I	TTAA	4 cut(s)	6, 735, 909, 1029
Tru9I	TTAA	4 cut(s)	6, 735, 909, 1029
TscAI	CASTG	4 cut(s)	1239, 1638, 1670, 1796
TseFI	GTSAC	4 cut(s)	161, 190, 852, 1574
TseI	GCWGC	7 cut(s)	214, 1093, 1100, 1370, 1541, 1550, 1750
Tsp45I	GTSAC	4 cut(s)	161, 190, 852, 1574
TspDTI	ATGAA	4 cut(s)	251, 333, 939, 1392
TspGWI	ACGGA	3 cut(s)	242, 761, 1385
TspMI	CCCGGG	1 cut(s)	1525
TspRI	CASTG	4 cut(s)	1239, 1638, 1670, 1796
VpaK11BI	GGWCC	4 cut(s)	943, 1250, 1558, 1852
VspI	ATTAAT	1 cut(s)	735
XapI	RAATTY	2 cut(s)	309, 1460
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1552
XmaI	CCCGGG	1 cut(s)	1525
XmnI	GAANNNNTTC	2 cut(s)	826, 1464
XspI	CTAG	2 cut(s)	524, 1824
ZrmI	AGTACT	1 cut(s)	782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.