Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005573

Physical Location & Seq

Genomic Coordinates Forward (+)

34054826 .. 34060982

Gene Structure 6157 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G015280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGCCGAGTTTCTTCATCTCTCCAAGAGAAGATTTACTGATTTCTCCGCGGTTCGGAAGGAAAATTCAGGATGAAACTGATAGAGTAACAGGAAGGTCAAAAATGATATCTCCTGTTCCTATCCATCTCAGTATCTACTCCCCCAACGTTGTGAACTTGACCCTAATTGATTTACCTGGTTTGACGAAAGTTGCTGTTGAGGGCCAGCCTGAAAGTATCGTTGAAGATATTGAAAACATGGTTCGATCTTATGTTGAGAAGCCTAATAGCATCATACTAGCGATATCTCCAGCCAACCAAGATATCGCTACATCTGATGCTATCAAACTTGCACGGGAAGTGGATCCAGCAGGTGAACGAACGTTTGGGGTGATGACAAAGCTTGATTTGATGGACAAAGGAACTAACGCTTTGGATGTTATTGAAGGAAGATCTTATCGCCTGCAACATCCTTGGGTTGGAGTTGTGAACCGTTCCCAAGCAGATATTAATAAAAATACGGACATGATTGTCGCAAGGCGCAAGGAACATGAGTACTTTGCAACCAGTCCTGACTATGGGCACTTGGCTAATAGAATGGGTTCAGAGTACCTTGCTAAACTTCTGTCACAGCACTTGGAGTCTGTTATTAGGGCTCGTATCCCAAGTATCACATCCTTGATTAACAAAACCATTGATGAACTTGAATCCGAGATGGACCATCTTGGTAGGCCTATAGCTGTTGACGCTGGGGCTCAGTTATACACTATACTGGAACTTTGCCGTGCATTTGACCGAATATTTAAAGAGCACTTAGATGGAGGGCGACCCGGAGGTGATAGGATTTATGGTGTCTTTGACAACCAGCTGCCTGCTGCTTTGAGGAAGCTTCCATTTGATCGACATCTGTCTATGCAGAATGTAAAGAAAGTGGTTTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGTCTTATTGAGGGATCACTGAATTACTTTAGAGGTCCAGCTGAGGCTTCTGTGGATGCTGTCCACTTTGTCTTGAAAGAACTCGTGAGGAAGTCATTAGCAGAAACTCAGGAATTGAGACGGTTTCCGACTCTGCAAGCTGAAATAGCGGGTGCAGCTAATGAAGCATTGGAAAGGTTCCGTGATGAGAGTAAGAAGTCAACTCTGCGCTTAGTGGACATGGAATCCTCATACTTGACTGTGGAATTCTTTCGAAGACTTCCACAGGAAGTGGAGAAACCAGTTGGCCCAGGAGGAAAACCAGGACACCCGGGAGGAAATCCAGCTGCCAATGCTGCTGTGGACCGCTATTCAGAGGGTCACTTTCGGAGGATAGGATCGAACGTGTCCTCTTATGTGGGAATGGTGTCTGAGACACTGAGGAATACAATTCCCAAGGCTGTCGTTCACTGTCAAGTCAGGGAGGCAAAAACGTCGTTGCTAAATCACTTCTATATACAAATAGGAAAGAGAGAGGGTAAGCAGTTAGGTCAGCTGCTTGACGAAGACCCAGCATTGATGGAGAGGAGGCTACAGTGTGCTAAAAGGCTTGAATTATACAAGTCAGCTAGGGATGAGGTTGATTCTGTATCATGGGTCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

537

Amino Acids

60.26

Weight (kDa)

6.95

Isoelectric Point (pI)

42.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	20 - 128	1.4e-27	Dynamin family
Dynamin_M	PF01031	136 - 403	2.6e-62	Dynamin central region
GED	PF02212	441 - 533	7.9e-24	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44590 AT2G44590 AT2G44590 AT3G60190
fragaria_vesca	FvH4_7g08650 FvH4_7g08650 FvH4_7g08650
malus_domestica	MD02G1226500.v1.1 MD07G1087500.v1.1
prunus_persica	Prupe.2G114300_v2.0.a1
pyrus_communis	pycom02g19540 pycom07g07000
rosa_chinensis	RchiOBHm_Chr1g0343681 RchiOBHm_Chr1g0343771
rosa_laevigata	RLG00000028954
rosa_multiflora	Rmu_sc0000021.1_g000003
rosa_roxburghii	Rroxscaffold_4G00310360
rosa_rugosa	Rorug01G0168300
rosa_samantha	Rh1AG184200 Rh1AG185200 Rh1BG152000 Rh1CG171100 Rh1DG183900 Rh3AG232400 Rh4CG303300 Rh6AG164500
rosa_wichuraiana	Rw0G012950 Rw1G015280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	341
AasI	GACNNNNNNGTC	1 cut(s)	509
Acc36I	ACCTGC	1 cut(s)	341
AccII	CGCG	1 cut(s)	49
AciI	CCGC	5 cut(s)	47, 49, 1118, 1315, 1609
AclI	AACGTT	2 cut(s)	147, 362
AclWI	GGATC	4 cut(s)	338, 351, 991, 1354
AcsI	RAATTY	2 cut(s)	63, 1214
AcyI	GRCGYC	1 cut(s)	970
AfaI	GTAC	2 cut(s)	536, 590
AfiI	CCNNNNNNNGG	4 cut(s)	53, 458, 557, 959
AflIII	ACRYGT	1 cut(s)	1353
AgsI	TTSAA	6 cut(s)	224, 233, 425, 686, 1045, 1562
AjnI	CCWGG	3 cut(s)	175, 1258, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	348, 380
Alw21I	GWGCWC	1 cut(s)	792
Alw26I	GTCTC	2 cut(s)	1081, 1376
AlwI	GGATC	4 cut(s)	338, 351, 991, 1354
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	1 cut(s)	1279
AoxI	GGCC	3 cut(s)	202, 710, 1255
ApeKI	GCWGC	6 cut(s)	847, 854, 1124, 1295, 1304, 1504
ApoI	RAATTY	2 cut(s)	63, 1214
AseI	ATTAAT	1 cut(s)	489
Asp700I	GAANNNNTTC	2 cut(s)	580, 1218
AspLEI	GCGC	2 cut(s)	522, 1179
AspS9I	GGNCC	6 cut(s)	202, 697, 1004, 1256, 1312, 1606
AsuC2I	CCSGG	3 cut(s)	810, 1280, 1281
AsuHPI	GGTGA	3 cut(s)	365, 382, 827
AsuII	TTCGAA	1 cut(s)	1222
AvaI	CYCGRG	1 cut(s)	1279
AvaII	GGWCC	4 cut(s)	697, 1004, 1312, 1606
BaeGI	GKGCMC	1 cut(s)	564
BamHI	GGATCC	1 cut(s)	343
BanII	GRGCYC	2 cut(s)	637, 736
BauI	CACGAG	1 cut(s)	1052
BbsI	GAAGAC	2 cut(s)	1231, 1521
Bbv12I	GWGCWC	1 cut(s)	792
BbvCI	CCTCAGC	1 cut(s)	1011
BbvI	GCAGC	6 cut(s)	834, 841, 1136, 1282, 1291, 1491
BccI	CCATC	7 cut(s)	132, 385, 688, 708, 791, 920, 1522
BceAI	ACGGC	1 cut(s)	747
BcgI	CGANNNNNNTGC	2 cut(s)	1425, 1459
BciT130I	CCWGG	3 cut(s)	177, 1260, 1272
BciVI	GTATCC	1 cut(s)	650
BcnI	CCSGG	3 cut(s)	810, 1280, 1281
BcoDI	GTCTC	2 cut(s)	1081, 1376
BfaI	CTAG	2 cut(s)	278, 1578
BfmI	CTRYAG	2 cut(s)	714, 1541
BfuAI	ACCTGC	1 cut(s)	341
BfuI	GTATCC	1 cut(s)	650
BglII	AGATCT	1 cut(s)	431
BisI	GCNGC	6 cut(s)	848, 855, 1125, 1296, 1305, 1505
BlsI	GCNGC	6 cut(s)	849, 856, 1126, 1297, 1306, 1506
BmcAI	AGTACT	1 cut(s)	536
Bme1390I	CCNGG	6 cut(s)	177, 810, 1260, 1272, 1280, 1281
Bme18I	GGWCC	4 cut(s)	697, 1004, 1312, 1606
BmeT110I	CYCGRG	1 cut(s)	1279
BmgT120I	GGNCC	6 cut(s)	202, 697, 1004, 1256, 1312, 1606
BmiI	GGNNCC	3 cut(s)	345, 1148, 1607
BmrFI	CCNGG	6 cut(s)	177, 810, 1260, 1272, 1280, 1281
BmsI	GCATC	3 cut(s)	279, 307, 1015
BoxI	GACNNNNGTC	1 cut(s)	886
BpiI	GAAGAC	2 cut(s)	1231, 1521
BpmI	CTGGAG	1 cut(s)	273
Bpu10I	CCTNAGC	1 cut(s)	1011
Bpu14I	TTCGAA	1 cut(s)	1222
BpuMI	CCSGG	3 cut(s)	810, 1280, 1281
BsaBI	GATNNNNATC	2 cut(s)	882, 930
BsaHI	GRCGYC	1 cut(s)	970
BsaJI	CCNNGG	5 cut(s)	47, 452, 1258, 1279, 1404
Bsc4I	CCNNNNNNNGG	4 cut(s)	53, 458, 557, 959
Bse118I	RCCGGY	1 cut(s)	966
Bse1I	ACTGG	3 cut(s)	546, 756, 1250
Bse8I	GATNNNNATC	2 cut(s)	882, 930
BseBI	CCWGG	3 cut(s)	177, 1260, 1272
BseDI	CCNNGG	5 cut(s)	47, 452, 1258, 1279, 1404
BseGI	GGATG	6 cut(s)	76, 421, 448, 653, 1030, 1588
BseJI	GATNNNNATC	2 cut(s)	882, 930
BseLI	CCNNNNNNNGG	4 cut(s)	53, 458, 557, 959
BseMII	CTCAG	6 cut(s)	142, 749, 1002, 1091, 1371, 1379
BseNI	ACTGG	3 cut(s)	546, 756, 1250
BseRI	GAGGAG	1 cut(s)	1549
BseSI	GKGCMC	1 cut(s)	564
BseXI	GCAGC	6 cut(s)	834, 841, 1136, 1282, 1291, 1491
BseYI	CCCAGC	2 cut(s)	728, 1519
BsgI	GTGCAG	1 cut(s)	1143
Bsh1236I	CGCG	1 cut(s)	49
BshFI	GGCC	3 cut(s)	204, 712, 1257
BsiHKAI	GWGCWC	1 cut(s)	792
BsiHKCI	CYCGRG	1 cut(s)	1279
BsiSI	CCGG	3 cut(s)	810, 967, 1280
BslI	CCNNNNNNNGG	4 cut(s)	53, 458, 557, 959
BsmAI	GTCTC	2 cut(s)	1081, 1376
BsmBI	CGTCTC	1 cut(s)	1081
BsnI	GGCC	3 cut(s)	204, 712, 1257
BsoBI	CYCGRG	1 cut(s)	1279
Bsp119I	TTCGAA	1 cut(s)	1222
Bsp1286I	GDGCHC	4 cut(s)	564, 637, 736, 792
Bsp143I	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
BspACI	CCGC	5 cut(s)	47, 49, 1118, 1315, 1609
BspANI	GGCC	3 cut(s)	204, 712, 1257
BspCNI	CTCAG	6 cut(s)	141, 748, 1003, 1090, 1372, 1380
BspFNI	CGCG	1 cut(s)	49
BspLI	GGNNCC	3 cut(s)	345, 1148, 1607
BspMI	ACCTGC	1 cut(s)	341
BspPI	GGATC	4 cut(s)	338, 351, 991, 1354
BspT104I	TTCGAA	1 cut(s)	1222
BsrFI	RCCGGY	1 cut(s)	966
BsrI	ACTGG	3 cut(s)	546, 756, 1250
BssAI	RCCGGY	1 cut(s)	966
BssECI	CCNNGG	5 cut(s)	47, 452, 1258, 1279, 1404
BssMI	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
BssNI	GRCGYC	1 cut(s)	970
BssSI	CACGAG	1 cut(s)	1052
BssT1I	CCWWGG	2 cut(s)	452, 1404
Bst2BI	CACGAG	1 cut(s)	1052
Bst2UI	CCWGG	3 cut(s)	177, 1260, 1272
Bst4CI	ACNGT	5 cut(s)	473, 1092, 1210, 1421, 1545
BstACI	GRCGYC	1 cut(s)	970
BstBI	TTCGAA	1 cut(s)	1222
BstC8I	GCNNGC	4 cut(s)	206, 443, 852, 1107
BstDEI	CTNAG	8 cut(s)	128, 735, 793, 1011, 1077, 1180, 1380, 1388
BstDSI	CCRYGG	1 cut(s)	47
BstEII	GGTNACC	1 cut(s)	962
BstF5I	GGATG	6 cut(s)	76, 421, 448, 653, 1030, 1588
BstFNI	CGCG	1 cut(s)	49
BstHHI	GCGC	2 cut(s)	522, 1179
BstKTI	GATC	6 cut(s)	248, 346, 434, 880, 986, 1349
BstMAI	GTCTC	2 cut(s)	1081, 1376
BstMBI	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
BstMWI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1124, 1133, 1301, 1304
BstNI	CCWGG	3 cut(s)	177, 1260, 1272
BstPAI	GACNNNNGTC	1 cut(s)	886
BstPI	GGTNACC	1 cut(s)	962
BstSCI	CCNGG	6 cut(s)	175, 808, 1258, 1270, 1278, 1279
BstSFI	CTRYAG	2 cut(s)	714, 1541
BstSLI	GKGCMC	1 cut(s)	564
BstUI	CGCG	1 cut(s)	49
BstV1I	GCAGC	6 cut(s)	834, 841, 1136, 1282, 1291, 1491
BstV2I	GAAGAC	2 cut(s)	1231, 1521
BstX2I	RGATCY	2 cut(s)	343, 431
BstYI	RGATCY	2 cut(s)	343, 431
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	3 cut(s)	204, 712, 1257
BtgI	CCRYGG	1 cut(s)	47
BtsCI	GGATG	6 cut(s)	76, 421, 448, 653, 1030, 1588
BtsIMutI	CAGTG	4 cut(s)	986, 1385, 1417, 1550
BveI	ACCTGC	1 cut(s)	341
Cac8I	GCNNGC	4 cut(s)	206, 443, 852, 1107
CaiI	CAGNNNCTG	1 cut(s)	923
CfoI	GCGC	2 cut(s)	522, 1179
Cfr10I	RCCGGY	1 cut(s)	966
Cfr13I	GGNCC	6 cut(s)	202, 697, 1004, 1256, 1312, 1606
Cfr42I	CCGCGG	1 cut(s)	50
Cfr9I	CCCGGG	1 cut(s)	1279
CseI	GACGC	2 cut(s)	734, 959
CsiI	ACCWGGT	1 cut(s)	175
Csp6I	GTAC	2 cut(s)	535, 589
CviAII	CATG	5 cut(s)	238, 505, 530, 1189, 1602
CviQI	GTAC	2 cut(s)	535, 589
DdeI	CTNAG	8 cut(s)	128, 735, 793, 1011, 1077, 1180, 1380, 1388
DpnI	GATC	6 cut(s)	247, 345, 433, 879, 985, 1348
DpnII	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
DraI	TTTAAA	1 cut(s)	784
DrdI	GACNNNNNNGTC	1 cut(s)	509
DseDI	GACNNNNNNGTC	1 cut(s)	509
Eco130I	CCWWGG	2 cut(s)	452, 1404
Eco147I	AGGCCT	1 cut(s)	712
Eco24I	GRGCYC	2 cut(s)	637, 736
Eco32I	GATATC	3 cut(s)	108, 285, 304
Eco47I	GGWCC	4 cut(s)	697, 1004, 1312, 1606
Eco88I	CYCGRG	1 cut(s)	1279
Eco91I	GGTNACC	1 cut(s)	962
EcoO65I	GGTNACC	1 cut(s)	962
EcoRI	GAATTC	1 cut(s)	1214
EcoRII	CCWGG	3 cut(s)	175, 1258, 1270
EcoRV	GATATC	3 cut(s)	108, 285, 304
EcoT14I	CCWWGG	2 cut(s)	452, 1404
EcoT38I	GRGCYC	2 cut(s)	637, 736
ErhI	CCWWGG	2 cut(s)	452, 1404
Esp3I	CGTCTC	1 cut(s)	1081
FaeI	CATG	5 cut(s)	241, 508, 533, 1192, 1605
FatI	CATG	5 cut(s)	237, 504, 529, 1188, 1601
FauI	CCCGC	1 cut(s)	1111
Fnu4HI	GCNGC	6 cut(s)	848, 855, 1125, 1296, 1305, 1505
FokI	GGATG	6 cut(s)	83, 428, 435, 640, 1037, 1595
FriOI	GRGCYC	2 cut(s)	637, 736
Fsp4HI	GCNGC	6 cut(s)	848, 855, 1125, 1296, 1305, 1505
FspBI	CTAG	2 cut(s)	278, 1578
GlaI	GCGC	2 cut(s)	521, 1178
GluI	GCNGC	6 cut(s)	848, 855, 1125, 1296, 1305, 1505
GsaI	CCCAGC	2 cut(s)	732, 1523
GsuI	CTGGAG	1 cut(s)	273
HaeIII	GGCC	3 cut(s)	204, 712, 1257
HapII	CCGG	3 cut(s)	810, 967, 1280
HgaI	GACGC	2 cut(s)	734, 959
HhaI	GCGC	2 cut(s)	522, 1179
Hin1I	GRCGYC	1 cut(s)	970
Hin1II	CATG	5 cut(s)	241, 508, 533, 1192, 1605
Hin6I	GCGC	2 cut(s)	520, 1177
HinP1I	GCGC	2 cut(s)	520, 1177
HincII	GTYRAC	2 cut(s)	724, 1170
HindII	GTYRAC	2 cut(s)	724, 1170
HindIII	AAGCTT	2 cut(s)	380, 866
HinfI	GANTC	5 cut(s)	620, 686, 1099, 1193, 1592
HpaII	CCGG	3 cut(s)	810, 967, 1280
HphI	GGTGA	3 cut(s)	365, 382, 827
Hpy166II	GTNNAC	9 cut(s)	154, 356, 469, 724, 1033, 1170, 1186, 1312, 1417
Hpy188I	TCNGA	9 cut(s)	56, 316, 586, 691, 919, 1098, 1324, 1338, 1381
Hpy188III	TCNNGA	5 cut(s)	68, 551, 1042, 1054, 1079
Hpy8I	GTNNAC	9 cut(s)	154, 356, 469, 724, 1033, 1170, 1186, 1312, 1417
Hpy99I	CGWCG	1 cut(s)	1447
HpyAV	CCTTC	3 cut(s)	51, 87, 419
HpyCH4III	ACNGT	5 cut(s)	473, 1092, 1210, 1421, 1545
HpyCH4IV	ACGT	4 cut(s)	147, 362, 1353, 1442
HpyCH4V	TGCA	7 cut(s)	332, 445, 542, 767, 895, 1105, 1124
HpyF10VI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1124, 1133, 1301, 1304
HpyF3I	CTNAG	8 cut(s)	128, 735, 793, 1011, 1077, 1180, 1380, 1388
HpySE526I	ACGT	4 cut(s)	147, 362, 1353, 1442
Hsp92I	GRCGYC	1 cut(s)	970
Hsp92II	CATG	5 cut(s)	241, 508, 533, 1192, 1605
HspAI	GCGC	2 cut(s)	520, 1177
KspI	CCGCGG	1 cut(s)	50
Kzo9I	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
Lsp1109I	GCAGC	6 cut(s)	834, 841, 1136, 1282, 1291, 1491
LweI	GCATC	3 cut(s)	279, 307, 1015
MabI	ACCWGGT	1 cut(s)	175
MaeI	CTAG	2 cut(s)	278, 1578
MaeII	ACGT	4 cut(s)	147, 362, 1353, 1442
MaeIII	GTNAC	4 cut(s)	85, 606, 962, 1328
MalI	GATC	6 cut(s)	247, 345, 433, 879, 985, 1348
MboI	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
MboII	GAAGA	6 cut(s)	4, 41, 236, 441, 1236, 1526
MflI	RGATCY	2 cut(s)	343, 431
MhlI	GDGCHC	4 cut(s)	564, 637, 736, 792
MluCI	AATT	7 cut(s)	63, 165, 991, 1082, 1214, 1398, 1562
MlyI	GAGTC	2 cut(s)	629, 1093
MmeI	TCCRAC	2 cut(s)	439, 1121
MroXI	GAANNNNTTC	2 cut(s)	580, 1218
MseI	TTAA	3 cut(s)	489, 663, 783
MslI	CAYNNNNRTG	1 cut(s)	795
MspA1I	CMGCKG	6 cut(s)	49, 847, 1010, 1295, 1504, 1611
MspI	CCGG	3 cut(s)	810, 967, 1280
MspR9I	CCNGG	6 cut(s)	177, 810, 1260, 1272, 1280, 1281
MvaI	CCWGG	3 cut(s)	177, 1260, 1272
MvnI	CGCG	1 cut(s)	49
MwoI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1124, 1133, 1301, 1304
NciI	CCSGG	3 cut(s)	810, 1280, 1281
NdeII	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
NlaIII	CATG	5 cut(s)	241, 508, 533, 1192, 1605
NlaIV	GGNNCC	3 cut(s)	345, 1148, 1607
NmeAIII	GCCGAG	1 cut(s)	30
NmuCI	GTSAC	2 cut(s)	606, 1328
NspV	TTCGAA	1 cut(s)	1222
PaqCI	CACCTGC	1 cut(s)	341
PceI	AGGCCT	1 cut(s)	712
PdmI	GAANNNNTTC	2 cut(s)	580, 1218
PfeI	GAWTC	3 cut(s)	686, 1193, 1592
PkrI	GCNGC	6 cut(s)	849, 856, 1126, 1297, 1306, 1506
PleI	GAGTC	2 cut(s)	628, 1093
PpsI	GAGTC	2 cut(s)	628, 1093
PshAI	GACNNNNGTC	1 cut(s)	886
PshBI	ATTAAT	1 cut(s)	489
Psp1406I	AACGTT	2 cut(s)	147, 362
Psp6I	CCWGG	3 cut(s)	175, 1258, 1270
PspEI	GGTNACC	1 cut(s)	962
PspFI	CCCAGC	2 cut(s)	728, 1519
PspGI	CCWGG	3 cut(s)	175, 1258, 1270
PspN4I	GGNNCC	3 cut(s)	345, 1148, 1607
PspPI	GGNCC	6 cut(s)	202, 697, 1004, 1256, 1312, 1606
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	2 cut(s)	343, 431
PvuII	CAGCTG	4 cut(s)	847, 1010, 1295, 1504
RsaI	GTAC	2 cut(s)	536, 590
RsaNI	GTAC	2 cut(s)	535, 589
RseI	CAYNNNNRTG	1 cut(s)	795
SacII	CCGCGG	1 cut(s)	50
SaqAI	TTAA	3 cut(s)	489, 663, 783
SatI	GCNGC	6 cut(s)	848, 855, 1125, 1296, 1305, 1505
Sau3AI	GATC	6 cut(s)	245, 343, 431, 877, 983, 1346
Sau96I	GGNCC	6 cut(s)	202, 697, 1004, 1256, 1312, 1606
ScaI	AGTACT	1 cut(s)	536
SchI	GAGTC	2 cut(s)	629, 1093
ScrFI	CCNGG	6 cut(s)	177, 810, 1260, 1272, 1280, 1281
SduI	GDGCHC	4 cut(s)	564, 637, 736, 792
SexAI	ACCWGGT	1 cut(s)	175
SfaNI	GCATC	3 cut(s)	279, 307, 1015
SfcI	CTRYAG	2 cut(s)	714, 1541
Sfr303I	CCGCGG	1 cut(s)	50
SfuI	TTCGAA	1 cut(s)	1222
SgrBI	CCGCGG	1 cut(s)	50
SinI	GGWCC	4 cut(s)	697, 1004, 1312, 1606
SmaI	CCCGGG	1 cut(s)	1281
SmiMI	CAYNNNNRTG	1 cut(s)	795
Sse9I	AATT	7 cut(s)	63, 165, 991, 1082, 1214, 1398, 1562
SseBI	AGGCCT	1 cut(s)	712
SsiI	CCGC	5 cut(s)	47, 49, 1118, 1315, 1609
SspI	AATATT	1 cut(s)	780
SspMI	CTAG	2 cut(s)	278, 1578
StuI	AGGCCT	1 cut(s)	712
StyD4I	CCNGG	6 cut(s)	175, 808, 1258, 1270, 1278, 1279
StyI	CCWWGG	2 cut(s)	452, 1404
TaaI	ACNGT	5 cut(s)	473, 1092, 1210, 1421, 1545
TaiI	ACGT	4 cut(s)	150, 365, 1356, 1445
TaqI	TCGA	4 cut(s)	244, 880, 1222, 1349
TaqII	GACCGA	1 cut(s)	789
TasI	AATT	7 cut(s)	63, 165, 991, 1082, 1214, 1398, 1562
TatI	WGTACW	1 cut(s)	534
TfiI	GAWTC	3 cut(s)	686, 1193, 1592
Tru1I	TTAA	3 cut(s)	489, 663, 783
Tru9I	TTAA	3 cut(s)	489, 663, 783
TscAI	CASTG	4 cut(s)	993, 1392, 1424, 1550
TseFI	GTSAC	2 cut(s)	606, 1328
TseI	GCWGC	6 cut(s)	847, 854, 1124, 1295, 1304, 1504
Tsp45I	GTSAC	2 cut(s)	606, 1328
TspDTI	ATGAA	4 cut(s)	4, 87, 693, 1146
TspGWI	ACGGA	2 cut(s)	515, 1139
TspMI	CCCGGG	1 cut(s)	1279
TspRI	CASTG	4 cut(s)	993, 1392, 1424, 1550
VpaK11BI	GGWCC	4 cut(s)	697, 1004, 1312, 1606
VspI	ATTAAT	1 cut(s)	489
XapI	RAATTY	2 cut(s)	63, 1214
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1306
XmaI	CCCGGG	1 cut(s)	1279
XmnI	GAANNNNTTC	2 cut(s)	580, 1218
XspI	CTAG	2 cut(s)	278, 1578
ZrmI	AGTACT	1 cut(s)	536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.