pycom02g25190

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
23219693 .. 23221310
1618 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g25190.1

Sequence Viewer

Length: 1515 bp
ATGGGGTACCTTTCTTGCAGAGCTGAATCAGCCATCTCCGTCGCCAATTCACAAACTTCATCGTCCAAAACCACCGCCACCGTCACCGCTGAAAAGCCCATCAAGATCGAACACTTCGACTACAGTGATCTTGTGGCCGCCACCAATGGCTTCTCCGAACAGAAGCTTTTGGGCAAAGGCAGCCATGGCTACGTCTACAAAGCTATGCTCCGCGGCCGTCTAGTTGCCATCAAAAGACCCTCCAGAGCTCACAACCAGACTCTCCGACCCAACTCGTGTTCTGGGCCGGAGACCGCCAACGAGAGTCCGAGGCTGGTCAATCTTTTGGGGTTTTCGAATGATTCGAAAGACAGGCTTTTGGTGGTGGAGTTCATGAGCAACGGTACGCTGTACGATGTTTTACATTCGAGTACGAATCGGCCTCCGAATTGGGGTCGTAGGATTAGATTAGCTTTGCAAACTGCTAAGGCAATTGACATTTTACATTCATCGAGCCCGCCTGTAATTCATAGAGATATTAAGTCTGCAAATGTTTTGATTGATCGTAGTTACAATGCCCGGTTGGGGGATTTTGGATTGGCTCTGAGGTACTGCCTGTTCGACGAATATAGGCTCCGGTCGACCCCTCCGGCGGGGACGATGGGGTACTTGGACCCTTGCTATGTGACCCCTGACAATTTGAGTACTAAAACTGATGTTTTTAGTTTCGGGATTTTGTTGTTGGAGATTATAAGTGGTAGGAAGGCTATAGATGTTGGGCATTCTCCGCCTTCGATTGTGGATTGGGCTATCCCGCTTATAAAGCGAGGGAAGCTGATAACGGTTTATGATCCGCAAATTGGACCTCCTAAAGACCCTGTTGTGAGGAAGCAATTAGCTGTCATTGCAGCCAAGTGTGTGAGGTCTTGTAGGGAGCGTAGGCCAACGATGAAGGAGGTTGTGGTTTGGCTTACCGGGTTGAGTAAACTGGTTCCCCTGCATTCGTGGAATGGTTTTAACAATCCGTGTACAATGGTAGAGACCATGGGGCGGCCAGTTGAGTCGAGGATTGTGCATTTGAGTACGAAGCTAGAGCGTGTTGGAGAAGAGAATTTGGAAGCCTTGGAAGCTAAGTTGACCAGGAAAGTATCGAGGAATTCGCAGAGAGTTTATTCAGATTTGGGGTTTAGTAGCAATCTGAAGGAGCTTATGGCAGGTACTGATGGGGAGCCTGACTTTCATGGTAATGCAGATGGAGATGATCGCAGTTCAAAATCAGCGAATCAGGTTTCTAGATTTGGTAGCGGACGATACAATGGCAGGATTAATAAATCAACTCCTGGTAACGGGAAACAAGTCCCTGATTTGATGCAAAATCATTCTTTTGGCAAAAGGTCGTTTACATGTTCAAGGAGAGATGATGCAATGGCTCATGTGAGCGGCAGTTCCCGTGCATCTGCTGGTATACAGCTTGCTGCAGAAGTAGATTTGTTGTTGGTATCTCATTTGTTCCGGGTTTTGTTATCTCGCCTCTAG

Protein Analysis

505

Amino Acids

55.52

Weight (kDa)

9.65

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 52 - 314 8.4e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 54 - 314 2.8e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012915)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 731, 800
Acc36I ACCTGC 1 cut(s) 1184
Acc65I GGTACC 1 cut(s) 6
AccB1I GGYRCC 1 cut(s) 6
AccBSI CCGCTC 1 cut(s) 1419
AccI GTMKAC 3 cut(s) 195, 620, 1444
AccII CGCG 1 cut(s) 213
AclWI GGATC 1 cut(s) 824
AcoI YGGCCR 3 cut(s) 135, 214, 1031
AcsI RAATTY 2 cut(s) 1090, 1135
AcuI CTGAAG 1 cut(s) 1199
AfiI CCNNNNNNNGG 8 cut(s) 431, 564, 565, 631, 632, 839, 1029, 1325
AflIII ACRYGT 1 cut(s) 1382
AgsI TTSAA 2 cut(s) 1251, 1389
AjnI CCWGG 2 cut(s) 1118, 1318
Alw21I GWGCWC 1 cut(s) 250
Alw26I GTCTC 2 cut(s) 284, 1013
AlwI GGATC 1 cut(s) 824
AlwNI CAGNNNCTG 1 cut(s) 1199
AoxI GGCC 6 cut(s) 135, 214, 284, 419, 920, 1031
ApeKI GCWGC 3 cut(s) 180, 887, 1454
ApoI RAATTY 2 cut(s) 1090, 1135
AseI ATTAAT 1 cut(s) 1305
Asp718I GGTACC 1 cut(s) 6
AspS9I GGNCC 3 cut(s) 284, 652, 842
AsuC2I CCSGG 3 cut(s) 559, 955, 1493
AsuHPI GGTGA 1 cut(s) 76
AsuII TTCGAA 2 cut(s) 335, 344
AvaII GGWCC 2 cut(s) 652, 842
BanI GGYRCC 1 cut(s) 6
BanII GRGCYC 2 cut(s) 250, 497
BauI CACGAG 1 cut(s) 274
Bbv12I GWGCWC 1 cut(s) 250
BbvI GCAGC 3 cut(s) 192, 899, 1441
BccI CCATC 6 cut(s) 41, 107, 236, 634, 1196, 1226
BceAI ACGGC 1 cut(s) 201
BcgI CGANNNNNNTGC 2 cut(s) 1033, 1067
BciT130I CCWGG 2 cut(s) 1120, 1320
BcnI CCSGG 3 cut(s) 559, 955, 1493
BcoDI GTCTC 2 cut(s) 284, 1013
BfaI CTAG 4 cut(s) 221, 1070, 1272, 1513
BfmI CTRYAG 3 cut(s) 121, 747, 1455
BfuAI ACCTGC 1 cut(s) 1184
BisI GCNGC 7 cut(s) 138, 181, 214, 888, 1031, 1420, 1455
BlsI GCNGC 7 cut(s) 139, 182, 215, 889, 1032, 1421, 1456
BmcAI AGTACT 1 cut(s) 685
Bme1390I CCNGG 5 cut(s) 559, 955, 1120, 1320, 1493
Bme18I GGWCC 2 cut(s) 652, 842
BmgT120I GGNCC 3 cut(s) 284, 652, 842
BmiI GGNNCC 5 cut(s) 8, 614, 654, 972, 1209
BmrFI CCNGG 5 cut(s) 559, 955, 1120, 1320, 1493
BmsI GCATC 3 cut(s) 1338, 1390, 1442
BpmI CTGGAG 1 cut(s) 226
Bpu10I CCTNAGC 1 cut(s) 465
Bpu14I TTCGAA 2 cut(s) 335, 344
BpuMI CCSGG 3 cut(s) 559, 955, 1493
BsaI GGTCTC 2 cut(s) 284, 1013
BsaJI CCNNGG 5 cut(s) 184, 211, 308, 1023, 1101
BsaWI WCCGGW 1 cut(s) 615
Bsc4I CCNNNNNNNGG 8 cut(s) 431, 564, 565, 631, 632, 839, 1029, 1325
Bse1I ACTGG 2 cut(s) 972, 1034
Bse3DI GCAATG 2 cut(s) 882, 1410
BseBI CCWGG 2 cut(s) 1120, 1320
BseDI CCNNGG 5 cut(s) 184, 211, 308, 1023, 1101
BseLI CCNNNNNNNGG 8 cut(s) 431, 564, 565, 631, 632, 839, 1029, 1325
BseMI GCAATG 2 cut(s) 882, 1410
BseMII CTCAG 1 cut(s) 575
BseNI ACTGG 2 cut(s) 972, 1034
BseX3I CGGCCG 1 cut(s) 214
BseXI GCAGC 3 cut(s) 192, 899, 1441
Bsh1236I CGCG 1 cut(s) 213
Bsh1285I CGRYCG 2 cut(s) 217, 620
BshFI GGCC 6 cut(s) 137, 216, 286, 421, 922, 1033
BshNI GGYRCC 1 cut(s) 6
BsiEI CGRYCG 2 cut(s) 217, 620
BsiHKAI GWGCWC 1 cut(s) 250
BsiSI CCGG 6 cut(s) 287, 559, 616, 629, 954, 1492
BslFI GGGAC 2 cut(s) 649, 1322
BslI CCNNNNNNNGG 8 cut(s) 431, 564, 565, 631, 632, 839, 1029, 1325
BsmAI GTCTC 2 cut(s) 284, 1013
BsmFI GGGAC 2 cut(s) 649, 1322
BsmI GAATGC 2 cut(s) 760, 979
BsnI GGCC 6 cut(s) 137, 216, 286, 421, 922, 1033
Bso31I GGTCTC 2 cut(s) 284, 1013
Bsp119I TTCGAA 2 cut(s) 335, 344
Bsp1286I GDGCHC 2 cut(s) 250, 497
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 5 cut(s) 105, 127, 541, 829, 1240
Bsp19I CCATGG 2 cut(s) 184, 1023
BspANI GGCC 6 cut(s) 137, 216, 286, 421, 922, 1033
BspCNI CTCAG 1 cut(s) 576
BspFNI CGCG 1 cut(s) 213
BspHI TCATGA 1 cut(s) 372
BspLI GGNNCC 5 cut(s) 8, 614, 654, 972, 1209
BspMAI CTGCAG 1 cut(s) 1459
BspMI ACCTGC 1 cut(s) 1184
BspPI GGATC 1 cut(s) 824
BspT104I TTCGAA 2 cut(s) 335, 344
BspT107I GGYRCC 1 cut(s) 6
BspTNI GGTCTC 2 cut(s) 284, 1013
BsrBI CCGCTC 1 cut(s) 1419
BsrDI GCAATG 2 cut(s) 882, 1410
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 2 cut(s) 972, 1034
BssECI CCNNGG 5 cut(s) 184, 211, 308, 1023, 1101
BssMI GATC 5 cut(s) 105, 127, 541, 829, 1240
BssNAI GTATAC 1 cut(s) 1445
BssSI CACGAG 1 cut(s) 274
BssT1I CCWWGG 3 cut(s) 184, 1023, 1101
Bst1107I GTATAC 1 cut(s) 1445
Bst2BI CACGAG 1 cut(s) 274
Bst2UI CCWGG 2 cut(s) 1120, 1320
Bst4CI ACNGT 4 cut(s) 82, 125, 383, 823
Bst6I CTCTTC 1 cut(s) 1080
BstAUI TGTACA 1 cut(s) 1007
BstBI TTCGAA 2 cut(s) 335, 344
BstC8I GCNNGC 2 cut(s) 497, 1452
BstDEI CTNAG 3 cut(s) 465, 584, 1110
BstDSI CCRYGG 3 cut(s) 184, 211, 1023
BstFNI CGCG 1 cut(s) 213
BstKTI GATC 5 cut(s) 108, 130, 544, 832, 1243
BstMAI GTCTC 2 cut(s) 284, 1013
BstMBI GATC 5 cut(s) 105, 127, 541, 829, 1240
BstMCI CGRYCG 2 cut(s) 217, 620
BstMWI GCNNNNNNNGC 8 cut(s) 29, 180, 186, 766, 802, 811, 884, 1106
BstNI CCWGG 2 cut(s) 1120, 1320
BstNSI RCATGY 1 cut(s) 1386
BstSCI CCNGG 5 cut(s) 557, 953, 1118, 1318, 1491
BstSFI CTRYAG 3 cut(s) 121, 747, 1455
BstUI CGCG 1 cut(s) 213
BstV1I GCAGC 3 cut(s) 192, 899, 1441
BstZ17I GTATAC 1 cut(s) 1445
BstZI CGGCCG 1 cut(s) 214
BsuRI GGCC 6 cut(s) 137, 216, 286, 421, 922, 1033
BtgI CCRYGG 3 cut(s) 184, 211, 1023
BtsIMutI CAGTG 1 cut(s) 130
BveI ACCTGC 1 cut(s) 1184
Cac8I GCNNGC 2 cut(s) 497, 1452
CaiI CAGNNNCTG 1 cut(s) 1199
CciI TCATGA 1 cut(s) 372
Cfr13I GGNCC 3 cut(s) 284, 652, 842
Cfr42I CCGCGG 1 cut(s) 214
CviAII CATG 6 cut(s) 185, 373, 1024, 1220, 1383, 1412
DdeI CTNAG 3 cut(s) 465, 584, 1110
DpnI GATC 5 cut(s) 107, 129, 543, 831, 1242
DpnII GATC 5 cut(s) 105, 127, 541, 829, 1240
EaeI YGGCCR 3 cut(s) 135, 214, 1031
EagI CGGCCG 1 cut(s) 214
Eam1104I CTCTTC 1 cut(s) 1080
EarI CTCTTC 1 cut(s) 1080
EciI GGCGGA 1 cut(s) 756
Ecl136II GAGCTC 1 cut(s) 248
EclXI CGGCCG 1 cut(s) 214
Eco130I CCWWGG 3 cut(s) 184, 1023, 1101
Eco24I GRGCYC 2 cut(s) 250, 497
Eco31I GGTCTC 2 cut(s) 284, 1013
Eco47I GGWCC 2 cut(s) 652, 842
Eco52I CGGCCG 1 cut(s) 214
Eco53kI GAGCTC 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 1199
EcoICRI GAGCTC 1 cut(s) 248
EcoRI GAATTC 1 cut(s) 1135
EcoRII CCWGG 2 cut(s) 1118, 1318
EcoT14I CCWWGG 3 cut(s) 184, 1023, 1101
EcoT38I GRGCYC 2 cut(s) 250, 497
ErhI CCWWGG 3 cut(s) 184, 1023, 1101
FaeI CATG 6 cut(s) 188, 376, 1027, 1223, 1386, 1415
FalI AAGNNNNNCTT 2 cut(s) 339, 371
FaqI GGGAC 2 cut(s) 649, 1322
FatI CATG 6 cut(s) 184, 372, 1023, 1219, 1382, 1411
FauI CCCGC 3 cut(s) 504, 625, 801
FblI GTMKAC 3 cut(s) 195, 620, 1444
Fnu4HI GCNGC 7 cut(s) 138, 181, 214, 888, 1031, 1420, 1455
FriOI GRGCYC 2 cut(s) 250, 497
Fsp4HI GCNGC 7 cut(s) 138, 181, 214, 888, 1031, 1420, 1455
FspBI CTAG 4 cut(s) 221, 1070, 1272, 1513
GluI GCNGC 7 cut(s) 138, 181, 214, 888, 1031, 1420, 1455
GsuI CTGGAG 1 cut(s) 226
HaeIII GGCC 6 cut(s) 137, 216, 286, 421, 922, 1033
HapII CCGG 6 cut(s) 287, 559, 616, 629, 954, 1492
Hin1II CATG 6 cut(s) 188, 376, 1027, 1223, 1386, 1415
HincII GTYRAC 2 cut(s) 621, 1116
HindII GTYRAC 2 cut(s) 621, 1116
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 7 cut(s) 26, 259, 304, 341, 415, 1040, 1261
HpaII CCGG 6 cut(s) 287, 559, 616, 629, 954, 1492
HphI GGTGA 1 cut(s) 76
Hpy166II GTNNAC 7 cut(s) 196, 621, 965, 1008, 1116, 1380, 1445
Hpy188I TCNGA 7 cut(s) 157, 266, 309, 426, 585, 1156, 1179
Hpy188III TCNNGA 5 cut(s) 103, 243, 373, 709, 1272
Hpy8I GTNNAC 7 cut(s) 196, 621, 965, 1008, 1116, 1380, 1445
Hpy99I CGWCG 2 cut(s) 44, 605
HpyAV CCTTC 4 cut(s) 736, 780, 925, 1174
HpyCH4III ACNGT 4 cut(s) 82, 125, 383, 823
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 180, 186, 766, 802, 811, 884, 1106
HpyF3I CTNAG 3 cut(s) 465, 584, 1110
HpySE526I ACGT 1 cut(s) 192
Hsp92II CATG 6 cut(s) 188, 376, 1027, 1223, 1386, 1415
KpnI GGTACC 1 cut(s) 10
KspI CCGCGG 1 cut(s) 214
Kzo9I GATC 5 cut(s) 105, 127, 541, 829, 1240
LmnI GCTCC 5 cut(s) 213, 618, 913, 1183, 1207
Lsp1109I GCAGC 3 cut(s) 192, 899, 1441
LweI GCATC 3 cut(s) 1338, 1390, 1442
MaeI CTAG 4 cut(s) 221, 1070, 1272, 1513
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 4 cut(s) 82, 548, 664, 1322
MalI GATC 5 cut(s) 107, 129, 543, 831, 1242
MbiI CCGCTC 1 cut(s) 1419
MboI GATC 5 cut(s) 105, 127, 541, 829, 1240
MboII GAAGA 1 cut(s) 1097
MfeI CAATTG 1 cut(s) 471
MhlI GDGCHC 2 cut(s) 250, 497
MluCI AATT 9 cut(s) 46, 427, 471, 504, 676, 837, 872, 1090, 1135
MlyI GAGTC 3 cut(s) 253, 313, 1049
MmeI TCCRAC 3 cut(s) 289, 702, 1060
MseI TTAA 3 cut(s) 519, 996, 1305
MslI CAYNNNNRTG 1 cut(s) 1224
MspA1I CMGCKG 2 cut(s) 89, 213
MspI CCGG 6 cut(s) 287, 559, 616, 629, 954, 1492
MspR9I CCNGG 5 cut(s) 559, 955, 1120, 1320, 1493
MunI CAATTG 1 cut(s) 471
Mva1269I GAATGC 2 cut(s) 760, 979
MvaI CCWGG 2 cut(s) 1120, 1320
MvnI CGCG 1 cut(s) 213
MwoI GCNNNNNNNGC 8 cut(s) 29, 180, 186, 766, 802, 811, 884, 1106
NciI CCSGG 3 cut(s) 559, 955, 1493
NcoI CCATGG 2 cut(s) 184, 1023
NdeII GATC 5 cut(s) 105, 127, 541, 829, 1240
NlaIII CATG 6 cut(s) 188, 376, 1027, 1223, 1386, 1415
NlaIV GGNNCC 5 cut(s) 8, 614, 654, 972, 1209
NmuCI GTSAC 2 cut(s) 82, 664
NspI RCATGY 1 cut(s) 1386
NspV TTCGAA 2 cut(s) 335, 344
PagI TCATGA 1 cut(s) 372
PciI ACATGT 1 cut(s) 1382
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 341
PctI GAATGC 2 cut(s) 760, 979
PfeI GAWTC 4 cut(s) 26, 341, 415, 1261
PkrI GCNGC 7 cut(s) 139, 182, 215, 889, 1032, 1421, 1456
PleI GAGTC 3 cut(s) 253, 312, 1048
PpsI GAGTC 3 cut(s) 253, 312, 1048
PscI ACATGT 1 cut(s) 1382
PshBI ATTAAT 1 cut(s) 1305
PsiI TTATAA 2 cut(s) 731, 800
Psp124BI GAGCTC 1 cut(s) 250
Psp6I CCWGG 2 cut(s) 1118, 1318
PspGI CCWGG 2 cut(s) 1118, 1318
PspN4I GGNNCC 5 cut(s) 8, 614, 654, 972, 1209
PspPI GGNCC 3 cut(s) 284, 652, 842
PsrI GAACNNNNNNTAC 2 cut(s) 581, 613
PstI CTGCAG 1 cut(s) 1459
PstNI CAGNNNCTG 1 cut(s) 1199
RseI CAYNNNNRTG 1 cut(s) 1224
SacI GAGCTC 1 cut(s) 250
SacII CCGCGG 1 cut(s) 214
SalI GTCGAC 1 cut(s) 619
SaqAI TTAA 3 cut(s) 519, 996, 1305
SatI GCNGC 7 cut(s) 138, 181, 214, 888, 1031, 1420, 1455
Sau3AI GATC 5 cut(s) 105, 127, 541, 829, 1240
Sau96I GGNCC 3 cut(s) 284, 652, 842
ScaI AGTACT 1 cut(s) 685
SchI GAGTC 3 cut(s) 253, 313, 1049
ScrFI CCNGG 5 cut(s) 559, 955, 1120, 1320, 1493
SduI GDGCHC 2 cut(s) 250, 497
SfaNI GCATC 3 cut(s) 1338, 1390, 1442
SfcI CTRYAG 3 cut(s) 121, 747, 1455
Sfr303I CCGCGG 1 cut(s) 214
SfuI TTCGAA 2 cut(s) 335, 344
SgrBI CCGCGG 1 cut(s) 214
SinI GGWCC 2 cut(s) 652, 842
SmiMI CAYNNNNRTG 1 cut(s) 1224
Sse9I AATT 9 cut(s) 46, 427, 471, 504, 676, 837, 872, 1090, 1135
SspMI CTAG 4 cut(s) 221, 1070, 1272, 1513
SstI GAGCTC 1 cut(s) 250
StyD4I CCNGG 5 cut(s) 557, 953, 1118, 1318, 1491
StyI CCWWGG 3 cut(s) 184, 1023, 1101
TaaI ACNGT 4 cut(s) 82, 125, 383, 823
TaiI ACGT 1 cut(s) 195
TasI AATT 9 cut(s) 46, 427, 471, 504, 676, 837, 872, 1090, 1135
TatI WGTACW 2 cut(s) 683, 1007
TauI GCSGC 4 cut(s) 140, 216, 1033, 1422
TfiI GAWTC 4 cut(s) 26, 341, 415, 1261
Tru1I TTAA 3 cut(s) 519, 996, 1305
Tru9I TTAA 3 cut(s) 519, 996, 1305
TscAI CASTG 1 cut(s) 130
TseFI GTSAC 2 cut(s) 82, 664
TseI GCWGC 3 cut(s) 180, 887, 1454
Tsp45I GTSAC 2 cut(s) 82, 664
TspDTI ATGAA 6 cut(s) 48, 361, 477, 497, 944, 1208
TspGWI ACGGA 2 cut(s) 28, 993
TspRI CASTG 1 cut(s) 130
VpaK11BI GGWCC 2 cut(s) 652, 842
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 2 cut(s) 1090, 1135
XbaI TCTAGA 1 cut(s) 1271
XceI RCATGY 1 cut(s) 1386
XmiI GTMKAC 3 cut(s) 195, 620, 1444
XspI CTAG 4 cut(s) 221, 1070, 1272, 1513
ZrmI AGTACT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.