RLG00000030533

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
63105491 .. 63106945
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030533

Sequence Viewer

Length: 1269 bp
ATGGGCTACCTTTCTTGCAGAGCCGAATCTGCTGTCTCCGTCTCCAATTCCCAGACCCCATCAGATTCCCATGAAAAACCCATCAAGATCCAACACTTCGATTACAGTGATCTCGTGGCTGCCACCAATGGCTTCTCTGATCAAAAGCTATTAGGCAAAGGCAGCCACGGCTATGTCTACAAAGCTGTACTTCGTGGCCGTCTTGTTGCCGTCAAGAGACCCTCCAGAGCTCACAGCAAAATTCCCAGACCCACTTCGATTTCTGGGCCTGAAGCCACCAACGAGGTCGACAACGAGATCGAGATCTTGTCGAAGATTCAGAGCCCGAGATTGGTGAACCTTCTTGGCTTCTCCAACGACACGAGAGATAGGCTTTTGGTGGTGGAGTTCATGAGCAACGGTACTCTCTATGATGTTTTACATTCTTCTAATGCTAATAATAAGCCTCCCAGTTGGGGAAGAAGAATTAGATTAGCTTTGCAAACTGCTAAGGCAATTGACATTTTACACTCGTCAAACCCACCTGTAATTCATAGAGATATTAAGTCTGCAAATGTTCTTATTGACCGTAGTTACAATGCCCGTTTGGGCGATTTTGGGTTGGCTCTAAGGTGCCATTTGGATGACTATAAGCTCCGGTCGACCCCGCCGGCCGGGACTATGGGGTACTTGGACCCTTGTTATGTTACTCCGGATAATTTGAGTACTAAAACTGATGTGTTTAGTTTTGGGATTTTGTTGTTGGAGATTATAAGTGGTAGGAAGGCTATTGATGTTGGGTTTTCGCCACCTTCGATTGTGGATTGGGCTATTCCTCTTATAAAGAGAGGGAAGTTGACTACTGTTTATGATCCTAGGATTGTGCCTCCTAAAGAGCCTGTTGTGAGGAAGCAGCTGGCTGTCATTGCAGCCAAGTGTGTGAGGTCCTGTAGGGAACGAAGGCCATCGATGAAGGAGATCGTGGTTTGGCTTACCGGGTTGAGTAAGTTGGTTCCTCTGCATTCATGGAATAATTTTAACAATCCATGTACAATGGTAGAGACCATGGGGCAACCTGTTGAATCAAGGACTTCACAGATGAATTTGAAGCCACATGGATTTGGAGAAGGGAATTTTGAAAGCATGGAAACTAACCGAGGGAGTAATCAGTCTACTCCTAGTAATGGGAGAGAAGTCCCTCATTTGATTCGAAATCAGTCATTTGGACAGAGGTCATTTATTTGTTCAAAAAGAGATGATGCCATTTCACATGCAAGTGGTGGTAGCTGA

Protein Analysis

423

Amino Acids

46.66

Weight (kDa)

9.54

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 46 - 321 6.2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 48 - 321 4.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012915)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 752, 821
AccB1I GGYRCC 1 cut(s) 612
AccI GTMKAC 4 cut(s) 177, 288, 641, 1151
AccIII TCCGGA 1 cut(s) 691
AciI CCGC 1 cut(s) 647
AclWI GGATC 2 cut(s) 82, 845
AcoI YGGCCR 2 cut(s) 196, 651
AcsI RAATTY 3 cut(s) 240, 1081, 1111
AcuI CTGAAG 1 cut(s) 291
AfaI GTAC 5 cut(s) 189, 403, 668, 706, 1030
AfiI CCNNNNNNNGG 4 cut(s) 331, 455, 653, 1163
AgsI TTSAA 4 cut(s) 1061, 1087, 1118, 1227
AluBI AGCT 7 cut(s) 148, 185, 230, 476, 634, 895, 1266
AluI AGCT 7 cut(s) 148, 185, 230, 476, 634, 895, 1266
Alw21I GWGCWC 1 cut(s) 232
Alw26I GTCTC 4 cut(s) 40, 46, 211, 1034
AlwI GGATC 2 cut(s) 82, 845
Ama87I CYCGRG 1 cut(s) 325
Aor13HI TCCGGA 1 cut(s) 691
AoxI GGCC 4 cut(s) 196, 266, 651, 941
ApeKI GCWGC 4 cut(s) 119, 162, 892, 908
ApoI RAATTY 3 cut(s) 240, 1081, 1111
ArsI GACNNNNNNTTYG 2 cut(s) 18, 50
AspA2I CCTAGG 1 cut(s) 854
AspS9I GGNCC 3 cut(s) 266, 673, 924
AsuC2I CCSGG 2 cut(s) 655, 976
AsuHPI GGTGA 1 cut(s) 346
AsuII TTCGAA 1 cut(s) 1189
AvaI CYCGRG 1 cut(s) 325
AvaII GGWCC 2 cut(s) 673, 924
AvrII CCTAGG 1 cut(s) 854
BanI GGYRCC 1 cut(s) 612
BanII GRGCYC 2 cut(s) 232, 326
BauI CACGAG 2 cut(s) 113, 361
Bbv12I GWGCWC 1 cut(s) 232
BbvI GCAGC 4 cut(s) 106, 174, 904, 920
BccI CCATC 3 cut(s) 67, 89, 952
BceAI ACGGC 3 cut(s) 183, 184, 194
BclI TGATCA 1 cut(s) 139
BcnI CCSGG 2 cut(s) 655, 976
BcoDI GTCTC 4 cut(s) 40, 46, 211, 1034
BfaI CTAG 2 cut(s) 855, 1158
BfmI CTRYAG 1 cut(s) 928
BglII AGATCT 1 cut(s) 303
BisI GCNGC 4 cut(s) 120, 163, 893, 909
BlnI CCTAGG 1 cut(s) 854
BlsI GCNGC 4 cut(s) 121, 164, 894, 910
BmcAI AGTACT 1 cut(s) 706
Bme1390I CCNGG 2 cut(s) 655, 976
Bme18I GGWCC 2 cut(s) 673, 924
BmeT110I CYCGRG 1 cut(s) 325
BmgT120I GGNCC 3 cut(s) 266, 673, 924
BmiI GGNNCC 3 cut(s) 614, 675, 993
BmrFI CCNGG 2 cut(s) 655, 976
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 1 cut(s) 1228
BmuI ACTGGG 1 cut(s) 444
BoxI GACNNNNGTC 1 cut(s) 1210
BpmI CTGGAG 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 489
Bpu14I TTCGAA 1 cut(s) 1189
BpuMI CCSGG 2 cut(s) 655, 976
Bsa29I ATCGAT 1 cut(s) 947
BsaBI GATNNNNATC 1 cut(s) 302
BsaI GGTCTC 2 cut(s) 211, 1034
BsaJI CCNNGG 4 cut(s) 166, 854, 1044, 1135
BsaWI WCCGGW 2 cut(s) 636, 691
Bsc4I CCNNNNNNNGG 4 cut(s) 331, 455, 653, 1163
Bse118I RCCGGY 1 cut(s) 649
Bse1I ACTGG 1 cut(s) 450
Bse3DI GCAATG 1 cut(s) 903
Bse8I GATNNNNATC 1 cut(s) 302
BseAI TCCGGA 1 cut(s) 691
BseCI ATCGAT 1 cut(s) 947
BseDI CCNNGG 4 cut(s) 166, 854, 1044, 1135
BseGI GGATG 1 cut(s) 628
BseJI GATNNNNATC 1 cut(s) 302
BseLI CCNNNNNNNGG 4 cut(s) 331, 455, 653, 1163
BseMI GCAATG 1 cut(s) 903
BseNI ACTGG 1 cut(s) 450
BseX3I CGGCCG 1 cut(s) 651
BseXI GCAGC 4 cut(s) 106, 174, 904, 920
Bsh1285I CGRYCG 2 cut(s) 641, 654
BshFI GGCC 4 cut(s) 198, 268, 653, 943
BshNI GGYRCC 1 cut(s) 612
BshVI ATCGAT 1 cut(s) 947
BsiEI CGRYCG 2 cut(s) 641, 654
BsiHKAI GWGCWC 1 cut(s) 232
BsiHKCI CYCGRG 1 cut(s) 325
BsiSI CCGG 5 cut(s) 637, 650, 654, 692, 975
BslFI GGGAC 2 cut(s) 670, 1160
BslI CCNNNNNNNGG 4 cut(s) 331, 455, 653, 1163
BsmAI GTCTC 4 cut(s) 40, 46, 211, 1034
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 2 cut(s) 670, 1160
BsmI GAATGC 1 cut(s) 1000
BsnI GGCC 4 cut(s) 198, 268, 653, 943
Bso31I GGTCTC 2 cut(s) 211, 1034
BsoBI CYCGRG 1 cut(s) 325
Bsp119I TTCGAA 1 cut(s) 1189
Bsp1286I GDGCHC 2 cut(s) 232, 326
Bsp13I TCCGGA 1 cut(s) 691
Bsp1407I TGTACA 1 cut(s) 1028
Bsp143I GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
Bsp19I CCATGG 1 cut(s) 1044
BspACI CCGC 1 cut(s) 647
BspANI GGCC 4 cut(s) 198, 268, 653, 943
BspDI ATCGAT 1 cut(s) 947
BspEI TCCGGA 1 cut(s) 691
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 3 cut(s) 614, 675, 993
BspPI GGATC 2 cut(s) 82, 845
BspT104I TTCGAA 1 cut(s) 1189
BspT107I GGYRCC 1 cut(s) 612
BspTNI GGTCTC 2 cut(s) 211, 1034
BsrDI GCAATG 1 cut(s) 903
BsrFI RCCGGY 1 cut(s) 649
BsrGI TGTACA 1 cut(s) 1028
BsrI ACTGG 1 cut(s) 450
BssAI RCCGGY 1 cut(s) 649
BssECI CCNNGG 4 cut(s) 166, 854, 1044, 1135
BssMI GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
BssSI CACGAG 2 cut(s) 113, 361
BssT1I CCWWGG 2 cut(s) 854, 1044
Bst2BI CACGAG 2 cut(s) 113, 361
Bst4CI ACNGT 4 cut(s) 107, 401, 569, 844
BstAUI TGTACA 1 cut(s) 1028
BstBI TTCGAA 1 cut(s) 1189
BstC8I GCNNGC 2 cut(s) 651, 897
BstDEI CTNAG 2 cut(s) 489, 608
BstDSI CCRYGG 2 cut(s) 166, 1044
BstF5I GGATG 1 cut(s) 628
BstKTI GATC 7 cut(s) 90, 112, 142, 300, 306, 853, 960
BstMAI GTCTC 4 cut(s) 40, 46, 211, 1034
BstMBI GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
BstMCI CGRYCG 2 cut(s) 641, 654
BstMWI GCNNNNNNNGC 4 cut(s) 29, 162, 168, 905
BstNSI RCATGY 1 cut(s) 1253
BstPAI GACNNNNGTC 1 cut(s) 1210
BstSCI CCNGG 2 cut(s) 653, 974
BstSFI CTRYAG 1 cut(s) 928
BstV1I GCAGC 4 cut(s) 106, 174, 904, 920
BstX2I RGATCY 2 cut(s) 87, 303
BstYI RGATCY 2 cut(s) 87, 303
BstZI CGGCCG 1 cut(s) 651
Bsu15I ATCGAT 1 cut(s) 947
BsuRI GGCC 4 cut(s) 198, 268, 653, 943
BsuTUI ATCGAT 1 cut(s) 947
BtgI CCRYGG 2 cut(s) 166, 1044
BtsCI GGATG 1 cut(s) 628
BtsIMutI CAGTG 1 cut(s) 112
Cac8I GCNNGC 2 cut(s) 651, 897
CciI TCATGA 1 cut(s) 390
Cfr10I RCCGGY 1 cut(s) 649
Cfr13I GGNCC 3 cut(s) 266, 673, 924
ClaI ATCGAT 1 cut(s) 947
Csp6I GTAC 5 cut(s) 188, 402, 667, 705, 1029
CviAII CATG 8 cut(s) 71, 391, 1005, 1026, 1045, 1094, 1123, 1250
CviQI GTAC 5 cut(s) 188, 402, 667, 705, 1029
DdeI CTNAG 2 cut(s) 489, 608
DpnI GATC 7 cut(s) 89, 111, 141, 299, 305, 852, 959
DpnII GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
EaeI YGGCCR 2 cut(s) 196, 651
EagI CGGCCG 1 cut(s) 651
Ecl136II GAGCTC 1 cut(s) 230
EclXI CGGCCG 1 cut(s) 651
Eco130I CCWWGG 2 cut(s) 854, 1044
Eco24I GRGCYC 2 cut(s) 232, 326
Eco31I GGTCTC 2 cut(s) 211, 1034
Eco47I GGWCC 2 cut(s) 673, 924
Eco52I CGGCCG 1 cut(s) 651
Eco53kI GAGCTC 1 cut(s) 230
Eco57I CTGAAG 1 cut(s) 291
Eco88I CYCGRG 1 cut(s) 325
EcoICRI GAGCTC 1 cut(s) 230
EcoO109I RGGNCCY 1 cut(s) 924
EcoT14I CCWWGG 2 cut(s) 854, 1044
EcoT38I GRGCYC 2 cut(s) 232, 326
ErhI CCWWGG 2 cut(s) 854, 1044
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 8 cut(s) 74, 394, 1008, 1029, 1048, 1097, 1126, 1253
FalI AAGNNNNNCTT 2 cut(s) 174, 206
FaqI GGGAC 2 cut(s) 670, 1160
FatI CATG 8 cut(s) 70, 390, 1004, 1025, 1044, 1093, 1122, 1249
FauI CCCGC 1 cut(s) 654
FbaI TGATCA 1 cut(s) 139
FblI GTMKAC 4 cut(s) 177, 288, 641, 1151
Fnu4HI GCNGC 4 cut(s) 120, 163, 893, 909
FokI GGATG 1 cut(s) 635
FriOI GRGCYC 2 cut(s) 232, 326
Fsp4HI GCNGC 4 cut(s) 120, 163, 893, 909
FspBI CTAG 2 cut(s) 855, 1158
GluI GCNGC 4 cut(s) 120, 163, 893, 909
GsuI CTGGAG 1 cut(s) 208
HaeIII GGCC 4 cut(s) 198, 268, 653, 943
HapII CCGG 5 cut(s) 637, 650, 654, 692, 975
Hin1II CATG 8 cut(s) 74, 394, 1008, 1029, 1048, 1097, 1126, 1253
HincII GTYRAC 3 cut(s) 289, 642, 837
HindII GTYRAC 3 cut(s) 289, 642, 837
HinfI GANTC 5 cut(s) 26, 65, 316, 1061, 1186
HpaII CCGG 5 cut(s) 637, 650, 654, 692, 975
HphI GGTGA 1 cut(s) 346
Hpy166II GTNNAC 6 cut(s) 178, 289, 337, 642, 837, 1152
Hpy188I TCNGA 3 cut(s) 64, 139, 321
Hpy188III TCNNGA 6 cut(s) 85, 214, 225, 301, 391, 692
Hpy8I GTNNAC 6 cut(s) 178, 289, 337, 642, 837, 1152
HpyAV CCTTC 6 cut(s) 350, 757, 801, 933, 946, 1100
HpyCH4III ACNGT 4 cut(s) 107, 401, 569, 844
HpyCH4V TGCA 6 cut(s) 18, 481, 551, 908, 1000, 1253
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 162, 168, 905
HpyF3I CTNAG 2 cut(s) 489, 608
Hsp92II CATG 8 cut(s) 74, 394, 1008, 1029, 1048, 1097, 1126, 1253
Kpn2I TCCGGA 1 cut(s) 691
KroI GCCGGC 1 cut(s) 649
KroNI GCCGGC 1 cut(s) 651
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
LmnI GCTCC 1 cut(s) 639
Lsp1109I GCAGC 4 cut(s) 106, 174, 904, 920
LweI GCATC 1 cut(s) 1228
MaeI CTAG 2 cut(s) 855, 1158
MaeIII GTNAC 2 cut(s) 572, 685
MalI GATC 7 cut(s) 89, 111, 141, 299, 305, 852, 959
MboI GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
MboII GAAGA 4 cut(s) 325, 417, 471, 474
MfeI CAATTG 1 cut(s) 495
MflI RGATCY 2 cut(s) 87, 303
MhlI GDGCHC 2 cut(s) 232, 326
MluCI AATT 9 cut(s) 46, 240, 465, 495, 528, 697, 1012, 1081, 1111
MmeI TCCRAC 3 cut(s) 115, 378, 723
MroI TCCGGA 1 cut(s) 691
MroNI GCCGGC 1 cut(s) 649
MseI TTAA 2 cut(s) 543, 1017
MslI CAYNNNNRTG 3 cut(s) 171, 621, 1254
MspA1I CMGCKG 1 cut(s) 895
MspI CCGG 5 cut(s) 637, 650, 654, 692, 975
MspR9I CCNGG 2 cut(s) 655, 976
MunI CAATTG 1 cut(s) 495
Mva1269I GAATGC 1 cut(s) 1000
MwoI GCNNNNNNNGC 4 cut(s) 29, 162, 168, 905
NaeI GCCGGC 1 cut(s) 651
NciI CCSGG 2 cut(s) 655, 976
NcoI CCATGG 1 cut(s) 1044
NdeII GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
NgoMIV GCCGGC 1 cut(s) 649
NlaIII CATG 8 cut(s) 74, 394, 1008, 1029, 1048, 1097, 1126, 1253
NlaIV GGNNCC 3 cut(s) 614, 675, 993
NspI RCATGY 1 cut(s) 1253
NspV TTCGAA 1 cut(s) 1189
PagI TCATGA 1 cut(s) 390
PcsI WCGNNNNNNNCGW 1 cut(s) 791
PctI GAATGC 1 cut(s) 1000
PdiI GCCGGC 1 cut(s) 651
PfeI GAWTC 5 cut(s) 26, 65, 316, 1061, 1186
PkrI GCNGC 4 cut(s) 121, 164, 894, 910
PpuMI RGGWCCY 1 cut(s) 924
PshAI GACNNNNGTC 1 cut(s) 1210
PsiI TTATAA 2 cut(s) 752, 821
Psp124BI GAGCTC 1 cut(s) 232
Psp5II RGGWCCY 1 cut(s) 924
PspN4I GGNNCC 3 cut(s) 614, 675, 993
PspPI GGNCC 3 cut(s) 266, 673, 924
PspPPI RGGWCCY 1 cut(s) 924
PsuI RGATCY 2 cut(s) 87, 303
PvuII CAGCTG 1 cut(s) 895
RsaI GTAC 5 cut(s) 189, 403, 668, 706, 1030
RsaNI GTAC 5 cut(s) 188, 402, 667, 705, 1029
RseI CAYNNNNRTG 3 cut(s) 171, 621, 1254
SacI GAGCTC 1 cut(s) 232
SalI GTCGAC 2 cut(s) 287, 640
SaqAI TTAA 2 cut(s) 543, 1017
SatI GCNGC 4 cut(s) 120, 163, 893, 909
Sau3AI GATC 7 cut(s) 87, 109, 139, 297, 303, 850, 957
Sau96I GGNCC 3 cut(s) 266, 673, 924
ScaI AGTACT 1 cut(s) 706
ScrFI CCNGG 2 cut(s) 655, 976
SduI GDGCHC 2 cut(s) 232, 326
SfaNI GCATC 1 cut(s) 1228
SfcI CTRYAG 1 cut(s) 928
SfuI TTCGAA 1 cut(s) 1189
SinI GGWCC 2 cut(s) 673, 924
SmiMI CAYNNNNRTG 3 cut(s) 171, 621, 1254
Sse9I AATT 9 cut(s) 46, 240, 465, 495, 528, 697, 1012, 1081, 1111
SsiI CCGC 1 cut(s) 647
SspMI CTAG 2 cut(s) 855, 1158
SstI GAGCTC 1 cut(s) 232
StyD4I CCNGG 2 cut(s) 653, 974
StyI CCWWGG 2 cut(s) 854, 1044
TaaI ACNGT 4 cut(s) 107, 401, 569, 844
TaqI TCGA 9 cut(s) 99, 257, 288, 300, 311, 641, 794, 947, 1189
TasI AATT 9 cut(s) 46, 240, 465, 495, 528, 697, 1012, 1081, 1111
TatI WGTACW 3 cut(s) 187, 704, 1028
TfiI GAWTC 5 cut(s) 26, 65, 316, 1061, 1186
Tru1I TTAA 2 cut(s) 543, 1017
Tru9I TTAA 2 cut(s) 543, 1017
TscAI CASTG 1 cut(s) 112
TseI GCWGC 4 cut(s) 119, 162, 892, 908
TspDTI ATGAA 6 cut(s) 87, 379, 521, 965, 993, 1094
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 1 cut(s) 112
VpaK11BI GGWCC 2 cut(s) 673, 924
XapI RAATTY 3 cut(s) 240, 1081, 1111
XceI RCATGY 1 cut(s) 1253
XmaJI CCTAGG 1 cut(s) 854
XmiI GTMKAC 4 cut(s) 177, 288, 641, 1151
XspI CTAG 2 cut(s) 855, 1158
ZrmI AGTACT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.