Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0015716

Physical Location & Seq

Genomic Coordinates Forward (+)

1241010 .. 1244923

Gene Structure 3914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g01700.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGCAGGCGTGCCAACTCGTTGGCCAAGCTTGGGATACGGTTGAGGAAGGAACACATCTCAGTCTTTGGGTTCTAGAGCCTAAAGACAAGGGCTTTCAGTGTGGTTCAATATCAAATTCAGCTTTCAGTGTACCTGGTAACACCTCACTTCAATCCTCGCTGACTGAGACTTGGATAGGTAACCAGTCGGTCACGAAGCAGTGCTGTTTATCCAAATTGAAGGTGCTCCTCGGTCGGTTGATTCTACGACTTCAGTGCTATTTACCTAAAGATGTTGCCGGTTACCAGTGCTATTTATTTGAAGATGTTGACAGTTATCAACACAATGTTAAAAATCTCAATATGTTTGAGAAGTTTTGCATAGAGCGAGAGTTTGCGCATGACATATTTGTGTGTACTTGTTTGTGCGATGTTGCTGTTTTCCGGTCTGAAACCTGCTGGAAAAAGAAGTTACCTCTTTCGAACGGGAGAGTGGATGTCACTCTTAATTCGCAGACCTTCTATGTTGGAAAATTAATTTTAGTTTTATTGTTATTTCTATTGGGTTTTCTTGATAAAAAAATGAGTGTGATACAAATATATCAAACTCATAGTGAAATCACACTTCTATGGTGGGGCGGAAAATTTGAGTTAGGGTTTGCTTTAATTTTCTCTATAAATAAGGTCTTTGTAACTCATGGAATAACAAGTCACTCGAAATGTAGTCTTGTAGCCGTGCAATCTCTTTCCATTAGCTTGTTCATTTATGCGTACCTTGATTTTCAACCTAATATAACTCTTCAGTTTCCTCCAATGCCAATATCAGATGATAAAGAGAAGAGCCAGACATCCGTCATACGCGTGGAATCGTTACTATTAGGTACCTCTACCTTTGTTAATGTTGTCTTAAGTGCTGCTCTCTGTCTCGGTTTTGGACTCTCTTACATACCGTCAAGGACCCATAAGACTTTTCCTCCAACTAGGAGGCCAATCATAACGCGACACGTGTCGGTATCAGAGGCCAATCATAGCGCAACACGTGTCGATATCAGAGGTCAATCACAACACGACACGTGGGATCATTCTCCCACAATAATCCCTAATGTCATTTGTACTAAACTATTCACTAGAACTCACAAAAAGAGACCAATCTGGGTGAACCACGTACATCTTGTGTTATTTGCTTCCCTGTCTCTATTTATTTACATACTTATCCACACTAATGACCAGAACAACCTAGCGAAGGTCACAAACTTGACACTTTCTGTTGTACCAAAGTCTTCGCCGATTTTGTGCATCAACAAAGAACTACAAGAAGCTACAAATGGATTTACGGAAGAATTAGGAAAGGGTGTATTTGGAGTGGTTTCAAAGGGGGATGCAAATTGGTTTTGGTATGTCGAGGAGTTCAAAACAGAACTGAATGTAATTAGTCAGATGCATCACAAGAATCTGGTTTGTCTTTTCGGATATTGTGACAAGGGGCAACAAAGATCACTAGTTTTTGAGTTCATGAGCAATGGAACATTGGCAAGCTTTATTTTTGCTGATATCAAACCAAGTTGGAGACAGCGAATTGAAATCACTTATGGCGTTGCTAAGGGGCTTTTGTACTTGTCAATAGATCATTTGATTCGTCGAAGATCGATCATAATTCTTCGCCCTCTCTACAAAGAACACAAGGGAGTAGAGAGGGCACTTAAGCAAACGCAAAGTCGCGGGGCTATGGGCAAAATATCCATGAGTTTGGGTAACCACGGTTATCCGTCCAAACAGTTATGGTATAACCGTTTATCCGTGGAATTTAAATTGACGGTCATGAGTATTACCCGCGGTTATAAATGGATATCCAATTTAGGTCGGAAAGATCTTACTAATTTTGAGTTCAAGTTTATTTATCATGCATTGCATGCCGAACATATGTTGGTTGGAAGTTGGAAGGGATGCAGGGCCTCTTGGTCTATTAATTTCAGAGTGACGATCTCAAGTTTAGTGGTAAATCATTGTTCGATCGATCATGTGTATGGATGGTGTTGGATGTTCAGGCGCATGGTTACTAAGAAAAATCTTATCGATTCTATGATAAATTTCTTTTTTAATTTTCAAGTTGTTATAAAAACATGTAAACGGGTAAAAAAACTGGTAAACGGGCATATGTGGTTACGGTTAAATGGGTACGCAGTTATGGATATGATTAAACGATTATGGGTAAATAACCACAATTACCCGCCCACCATAACTATTTCCCATCCCATTACAAGAGTTGCATACATAAATCACTCTTTCTACGTAGTAACTAAAAATAGATTGATTATAAACAGAAAAATGCTACTCCCCATATTGCCAATTAGTTTTATAGTGGAACCTCAACTTTCTTCATGGTATCAGAGCAGGTTGCCTCATAGCCAAACGGCCACACGCACTCCACGTCACCCCGTTGTGCTGAGGGGGCGTGTTAAGAATAAAGAAGTTAGATTACTCCTCATACTATTTTATAATGAAACCTCAACTTCTTCACGTTCAACTTCTCCATTAGATAGTTTTTCTTATATCTTCACTCTGATTTTCTTATATCTTGCTATTATCTATGTGGTGGTGCCGATGAACCTCTTTCCTTTTATTATTTTTTCTTTCACCTTTTCAAATGCACCATCCTTATTTTTAGGAAGTTTTAACAAAAATGCCAATTCAATCCTAATACTATTCATTTTACCCTTTATTTTGTCTTTATCATTAAAACTCAAAGTTTTCAAGCCTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

914

Amino Acids

104.8

Weight (kDa)

9.65

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015716)

Species	Orthologous Gene IDs
pyrus_communis	pycom01g02010 pycom01g05050 pycom01g06360 pycom01g19880 pycom02g18830 pycom02g18850 pycom03g01690 pycom03g01700 pycom1146g00070 pycom11g21810 pycom13g16900 pycom13g21090 pycom13g26460 pycom15g08640 pycom520g00260 pycom520g01180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1818, 2093, 2294, 2475
Acc16I	TGCGCA	1 cut(s)	378
Acc36I	ACCTGC	2 cut(s)	443, 2361
Acc65I	GGTACC	1 cut(s)	860
AccB1I	GGYRCC	2 cut(s)	860, 2575
AccII	CGCG	4 cut(s)	840, 979, 1698, 1812
AciI	CCGC	5 cut(s)	618, 1698, 1810, 1812, 2207
AclWI	GGATC	1 cut(s)	1065
AcoI	YGGCCR	2 cut(s)	22, 2391
AcsI	RAATTY	4 cut(s)	115, 623, 1781, 2065
AcuI	CTGAAG	2 cut(s)	236, 764
AcvI	CACGTG	3 cut(s)	985, 1019, 1053
AfaI	GTAC	9 cut(s)	132, 397, 752, 862, 1093, 1146, 1251, 1592, 2156
AfiI	CCNNNNNNNGG	2 cut(s)	31, 1222
AflII	CTTAAG	2 cut(s)	886, 1679
AflIII	ACRYGT	7 cut(s)	838, 982, 984, 1016, 1018, 1050, 2099
AhlI	ACTAGT	1 cut(s)	1477
AjiI	CACGTC	1 cut(s)	2408
AjnI	CCWGG	1 cut(s)	133
AluBI	AGCT	5 cut(s)	29, 122, 735, 1298, 1515
AluI	AGCT	5 cut(s)	29, 122, 735, 1298, 1515
Alw21I	GWGCWC	1 cut(s)	228
Alw26I	GTCTC	5 cut(s)	161, 908, 1117, 1176, 1540
AlwI	GGATC	1 cut(s)	1065
AoxI	GGCC	5 cut(s)	22, 965, 999, 1929, 2391
ApeKI	GCWGC	1 cut(s)	893
ApoI	RAATTY	4 cut(s)	115, 623, 1781, 2065
ArsI	GACNNNNNNTTYG	2 cut(s)	1678, 1710
AseI	ATTAAT	2 cut(s)	515, 1944
Asp718I	GGTACC	1 cut(s)	860
AspLEI	GCGC	3 cut(s)	379, 1013, 2028
AspS9I	GGNCC	2 cut(s)	936, 1929
AsuHPI	GGTGA	3 cut(s)	1147, 2402, 2605
AsuII	TTCGAA	1 cut(s)	461
AvaII	GGWCC	1 cut(s)	936
BaeGI	GKGCMC	1 cut(s)	1678
BalI	TGGCCA	1 cut(s)	24
BanI	GGYRCC	2 cut(s)	860, 2575
BarI	GAAGNNNNNNTAC	2 cut(s)	2439, 2471
BbrPI	CACGTG	3 cut(s)	985, 1019, 1053
BbsI	GAAGAC	1 cut(s)	1251
Bbv12I	GWGCWC	1 cut(s)	228
BbvCI	CCTCAGC	1 cut(s)	2423
BbvI	GCAGC	1 cut(s)	880
BccI	CCATC	3 cut(s)	2001, 2235, 2638
BceAI	ACGGC	2 cut(s)	698, 2406
BcgI	CGANNNNNNTGC	2 cut(s)	237, 271
BciT130I	CCWGG	1 cut(s)	135
BciVI	GTATCC	1 cut(s)	28
BcoDI	GTCTC	5 cut(s)	161, 908, 1117, 1176, 1540
BcuI	ACTAGT	1 cut(s)	1477
BfaI	CTAG	5 cut(s)	74, 960, 1107, 1217, 1478
BfrI	CTTAAG	2 cut(s)	886, 1679
BfuAI	ACCTGC	2 cut(s)	443, 2361
BfuI	GTATCC	1 cut(s)	28
BglII	AGATCT	1 cut(s)	1846
BisI	GCNGC	1 cut(s)	894
BlsI	GCNGC	1 cut(s)	895
Bme1390I	CCNGG	1 cut(s)	135
Bme18I	GGWCC	1 cut(s)	936
BmgBI	CACGTC	1 cut(s)	2408
BmgT120I	GGNCC	2 cut(s)	936, 1929
BmiI	GGNNCC	4 cut(s)	862, 938, 2343, 2577
BmrFI	CCNGG	1 cut(s)	135
BmsI	GCATC	5 cut(s)	1284, 1348, 1407, 1429, 1913
BoxI	GACNNNNGTC	2 cut(s)	830, 985
BpiI	GAAGAC	1 cut(s)	1251
Bpu10I	CCTNAGC	2 cut(s)	1578, 2423
Bpu14I	TTCGAA	1 cut(s)	461
BpuEI	CTTGAG	1 cut(s)	1948
Bsa29I	ATCGAT	3 cut(s)	1625, 1992, 2052
BsaAI	YACGTR	5 cut(s)	985, 1019, 1053, 1144, 2269
BsaI	GGTCTC	1 cut(s)	1117
BsaJI	CCNNGG	4 cut(s)	229, 1735, 1776, 1810
BsaWI	WCCGGW	1 cut(s)	423
BsaXI	ACNNNNNCTCC	4 cut(s)	937, 967, 2386, 2416
Bsc4I	CCNNNNNNNGG	2 cut(s)	31, 1222
Bse118I	RCCGGY	1 cut(s)	278
Bse1I	ACTGG	3 cut(s)	184, 286, 2124
Bse3DI	GCAATG	2 cut(s)	1504, 1883
BseBI	CCWGG	1 cut(s)	135
BseCI	ATCGAT	3 cut(s)	1625, 1992, 2052
BseDI	CCNNGG	4 cut(s)	229, 1735, 1776, 1810
BseGI	GGATG	8 cut(s)	481, 827, 1363, 1928, 2012, 2022, 2227, 2630
BseLI	CCNNNNNNNGG	2 cut(s)	31, 1222
BseMI	GCAATG	2 cut(s)	1504, 1883
BseMII	CTCAG	3 cut(s)	73, 156, 2414
BseNI	ACTGG	3 cut(s)	184, 286, 2124
BseRI	GAGGAG	3 cut(s)	218, 1397, 2450
BseSI	GKGCMC	1 cut(s)	1678
BseXI	GCAGC	1 cut(s)	880
Bsh1236I	CGCG	4 cut(s)	840, 979, 1698, 1812
Bsh1285I	CGRYCG	2 cut(s)	235, 1992
BshFI	GGCC	5 cut(s)	24, 967, 1001, 1931, 2393
BshNI	GGYRCC	2 cut(s)	860, 2575
BshVI	ATCGAT	3 cut(s)	1625, 1992, 2052
BsiEI	CGRYCG	2 cut(s)	235, 1992
BsiHKAI	GWGCWC	1 cut(s)	228
BsiSI	CCGG	2 cut(s)	279, 424
BslI	CCNNNNNNNGG	2 cut(s)	31, 1222
BsmAI	GTCTC	5 cut(s)	161, 908, 1117, 1176, 1540
BsnI	GGCC	5 cut(s)	24, 967, 1001, 1931, 2393
Bso31I	GGTCTC	1 cut(s)	1117
Bsp119I	TTCGAA	1 cut(s)	461
Bsp1286I	GDGCHC	2 cut(s)	228, 1678
Bsp143I	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
BspACI	CCGC	5 cut(s)	618, 1698, 1810, 1812, 2207
BspANI	GGCC	5 cut(s)	24, 967, 1001, 1931, 2393
BspCNI	CTCAG	3 cut(s)	72, 157, 2415
BspDI	ATCGAT	3 cut(s)	1625, 1992, 2052
BspFNI	CGCG	4 cut(s)	840, 979, 1698, 1812
BspHI	TCATGA	2 cut(s)	1491, 1797
BspLI	GGNNCC	4 cut(s)	862, 938, 2343, 2577
BspMI	ACCTGC	2 cut(s)	443, 2361
BspPI	GGATC	1 cut(s)	1065
BspQI	GCTCTTC	1 cut(s)	812
BspT104I	TTCGAA	1 cut(s)	461
BspT107I	GGYRCC	2 cut(s)	860, 2575
BspTI	CTTAAG	2 cut(s)	886, 1679
BspTNI	GGTCTC	1 cut(s)	1117
BsrDI	GCAATG	2 cut(s)	1504, 1883
BsrFI	RCCGGY	1 cut(s)	278
BsrI	ACTGG	3 cut(s)	184, 286, 2124
BssAI	RCCGGY	1 cut(s)	278
BssECI	CCNNGG	4 cut(s)	229, 1735, 1776, 1810
BssMI	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
Bst2UI	CCWGG	1 cut(s)	135
Bst4CI	ACNGT	8 cut(s)	40, 314, 930, 1739, 1755, 1769, 1795, 2145
Bst6I	CTCTTC	2 cut(s)	783, 812
BstAFI	CTTAAG	2 cut(s)	886, 1679
BstAPI	GCANNNNNTGC	1 cut(s)	1889
BstBAI	YACGTR	5 cut(s)	985, 1019, 1053, 1144, 2269
BstBI	TTCGAA	1 cut(s)	461
BstC8I	GCNNGC	4 cut(s)	6, 10, 1513, 1890
BstDEI	CTNAG	5 cut(s)	59, 165, 1578, 2037, 2423
BstDSI	CCRYGG	3 cut(s)	1735, 1776, 1810
BstEII	GGTNACC	3 cut(s)	179, 281, 1730
BstENI	CCTNNNNNAGG	1 cut(s)	1220
BstF5I	GGATG	8 cut(s)	481, 827, 1363, 1928, 2012, 2022, 2227, 2630
BstFNI	CGCG	4 cut(s)	840, 979, 1698, 1812
BstHHI	GCGC	3 cut(s)	379, 1013, 2028
BstKTI	GATC	9 cut(s)	1060, 1475, 1606, 1625, 1629, 1849, 1962, 1992, 1996
BstMAI	GTCTC	5 cut(s)	161, 908, 1117, 1176, 1540
BstMBI	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
BstMCI	CGRYCG	2 cut(s)	235, 1992
BstMWI	GCNNNNNNNGC	2 cut(s)	1889, 2428
BstNI	CCWGG	1 cut(s)	135
BstNSI	RCATGY	2 cut(s)	1892, 2103
BstPAI	GACNNNNGTC	2 cut(s)	830, 985
BstPI	GGTNACC	3 cut(s)	179, 281, 1730
BstSCI	CCNGG	1 cut(s)	133
BstSLI	GKGCMC	1 cut(s)	1678
BstSNI	TACGTA	1 cut(s)	2269
BstUI	CGCG	4 cut(s)	840, 979, 1698, 1812
BstV1I	GCAGC	1 cut(s)	880
BstV2I	GAAGAC	1 cut(s)	1251
BstX2I	RGATCY	1 cut(s)	1846
BstXI	CCANNNNNNTGG	2 cut(s)	20, 1726
BstYI	RGATCY	1 cut(s)	1846
Bsu15I	ATCGAT	3 cut(s)	1625, 1992, 2052
BsuI	GTATCC	1 cut(s)	28
BsuRI	GGCC	5 cut(s)	24, 967, 1001, 1931, 2393
BsuTUI	ATCGAT	3 cut(s)	1625, 1992, 2052
BtgI	CCRYGG	3 cut(s)	1735, 1776, 1810
BtgZI	GCGATG	1 cut(s)	423
BtrI	CACGTC	1 cut(s)	2408
BtsCI	GGATG	8 cut(s)	481, 827, 1363, 1928, 2012, 2022, 2227, 2630
BtsI	GCAGTG	1 cut(s)	206
BtsIMutI	CAGTG	5 cut(s)	104, 133, 206, 260, 293
BveI	ACCTGC	2 cut(s)	443, 2361
Cac8I	GCNNGC	4 cut(s)	6, 10, 1513, 1890
CciI	TCATGA	2 cut(s)	1491, 1797
CfoI	GCGC	3 cut(s)	379, 1013, 2028
Cfr10I	RCCGGY	1 cut(s)	278
Cfr13I	GGNCC	2 cut(s)	936, 1929
Cfr42I	CCGCGG	1 cut(s)	1813
ClaI	ATCGAT	3 cut(s)	1625, 1992, 2052
CsiI	ACCWGGT	1 cut(s)	133
Csp6I	GTAC	9 cut(s)	131, 396, 751, 861, 1092, 1145, 1250, 1591, 2155
CspCI	CAANNNNNGTGG	2 cut(s)	1953, 1988
CviQI	GTAC	9 cut(s)	131, 396, 751, 861, 1092, 1145, 1250, 1591, 2155
DdeI	CTNAG	5 cut(s)	59, 165, 1578, 2037, 2423
DpnI	GATC	9 cut(s)	1059, 1474, 1605, 1624, 1628, 1848, 1961, 1991, 1995
DpnII	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
DraI	TTTAAA	1 cut(s)	1786
EaeI	YGGCCR	2 cut(s)	22, 2391
Eam1104I	CTCTTC	2 cut(s)	783, 812
EarI	CTCTTC	2 cut(s)	783, 812
EciI	GGCGGA	1 cut(s)	633
Eco105I	TACGTA	1 cut(s)	2269
Eco31I	GGTCTC	1 cut(s)	1117
Eco32I	GATATC	3 cut(s)	1027, 1531, 1827
Eco47I	GGWCC	1 cut(s)	936
Eco57I	CTGAAG	2 cut(s)	236, 764
Eco72I	CACGTG	3 cut(s)	985, 1019, 1053
Eco91I	GGTNACC	3 cut(s)	179, 281, 1730
EcoNI	CCTNNNNNAGG	1 cut(s)	1220
EcoO109I	RGGNCCY	2 cut(s)	936, 1929
EcoO65I	GGTNACC	3 cut(s)	179, 281, 1730
EcoRII	CCWGG	1 cut(s)	133
EcoRV	GATATC	3 cut(s)	1027, 1531, 1827
EcoT22I	ATGCAT	2 cut(s)	1422, 1885
FauI	CCCGC	3 cut(s)	1691, 1817, 2214
FauNDI	CATATG	2 cut(s)	1899, 2133
Fnu4HI	GCNGC	1 cut(s)	894
FokI	GGATG	8 cut(s)	488, 814, 1370, 1935, 2019, 2029, 2214, 2617
Fsp4HI	GCNGC	1 cut(s)	894
FspBI	CTAG	5 cut(s)	74, 960, 1107, 1217, 1478
FspI	TGCGCA	1 cut(s)	378
GlaI	GCGC	3 cut(s)	378, 1012, 2027
GluI	GCNGC	1 cut(s)	894
HaeIII	GGCC	5 cut(s)	24, 967, 1001, 1931, 2393
HapII	CCGG	2 cut(s)	279, 424
HhaI	GCGC	3 cut(s)	379, 1013, 2028
Hin6I	GCGC	3 cut(s)	377, 1011, 2026
HinP1I	GCGC	3 cut(s)	377, 1011, 2026
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	2 cut(s)	27, 1513
HinfI	GANTC	6 cut(s)	241, 845, 915, 1429, 1612, 2054
HpaII	CCGG	2 cut(s)	279, 424
HphI	GGTGA	3 cut(s)	1147, 2402, 2605
Hpy166II	GTNNAC	6 cut(s)	131, 310, 396, 1138, 2105, 2125
Hpy188III	TCNNGA	5 cut(s)	74, 193, 551, 1492, 1798
Hpy8I	GTNNAC	6 cut(s)	131, 310, 396, 1138, 2105, 2125
Hpy99I	CGWCG	1 cut(s)	1620
HpyAV	CCTTC	5 cut(s)	41, 214, 508, 1216, 1912
HpyCH4III	ACNGT	8 cut(s)	40, 314, 930, 1739, 1755, 1769, 1795, 2145
HpyCH4IV	ACGT	7 cut(s)	984, 1018, 1052, 1143, 2268, 2407, 2497
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1889, 2428
HpyF3I	CTNAG	5 cut(s)	59, 165, 1578, 2037, 2423
HpySE526I	ACGT	7 cut(s)	984, 1018, 1052, 1143, 2268, 2407, 2497
HspAI	GCGC	3 cut(s)	377, 1011, 2026
KpnI	GGTACC	1 cut(s)	864
KspI	CCGCGG	1 cut(s)	1813
Kzo9I	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	1 cut(s)	231
Lsp1109I	GCAGC	1 cut(s)	880
LweI	GCATC	5 cut(s)	1284, 1348, 1407, 1429, 1913
MabI	ACCWGGT	1 cut(s)	133
MaeI	CTAG	5 cut(s)	74, 960, 1107, 1217, 1478
MaeII	ACGT	7 cut(s)	984, 1018, 1052, 1143, 2268, 2407, 2497
MalI	GATC	9 cut(s)	1059, 1474, 1605, 1624, 1628, 1848, 1961, 1991, 1995
MboI	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
MflI	RGATCY	1 cut(s)	1846
MhlI	GDGCHC	2 cut(s)	228, 1678
MlsI	TGGCCA	1 cut(s)	24
MluI	ACGCGT	1 cut(s)	838
MluNI	TGGCCA	1 cut(s)	24
MlyI	GAGTC	1 cut(s)	909
MmeI	TCCRAC	7 cut(s)	487, 980, 1523, 1820, 1888, 1895, 1994
Mox20I	TGGCCA	1 cut(s)	24
Mph1103I	ATGCAT	2 cut(s)	1422, 1885
MscI	TGGCCA	1 cut(s)	24
MslI	CAYNNNNRTG	5 cut(s)	389, 607, 839, 1200, 2001
Msp20I	TGGCCA	1 cut(s)	24
MspA1I	CMGCKG	1 cut(s)	1812
MspCI	CTTAAG	2 cut(s)	886, 1679
MspI	CCGG	2 cut(s)	279, 424
MspR9I	CCNGG	1 cut(s)	135
MvaI	CCWGG	1 cut(s)	135
MvnI	CGCG	4 cut(s)	840, 979, 1698, 1812
MwoI	GCNNNNNNNGC	2 cut(s)	1889, 2428
NdeI	CATATG	2 cut(s)	1899, 2133
NdeII	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
NlaIV	GGNNCC	4 cut(s)	862, 938, 2343, 2577
NmuCI	GTSAC	7 cut(s)	190, 478, 689, 1225, 1454, 1954, 2408
NsbI	TGCGCA	1 cut(s)	378
NsiI	ATGCAT	2 cut(s)	1422, 1885
NspI	RCATGY	2 cut(s)	1892, 2103
NspV	TTCGAA	1 cut(s)	461
PaeI	GCATGC	1 cut(s)	1892
PagI	TCATGA	2 cut(s)	1491, 1797
PciI	ACATGT	1 cut(s)	2099
PciSI	GCTCTTC	1 cut(s)	812
PcsI	WCGNNNNNNNCGW	1 cut(s)	2404
PfeI	GAWTC	5 cut(s)	241, 845, 1429, 1612, 2054
PkrI	GCNGC	1 cut(s)	895
Ple19I	CGATCG	1 cut(s)	1992
PleI	GAGTC	1 cut(s)	909
PmaCI	CACGTG	3 cut(s)	985, 1019, 1053
PmlI	CACGTG	3 cut(s)	985, 1019, 1053
PpsI	GAGTC	1 cut(s)	909
Ppu21I	YACGTR	5 cut(s)	985, 1019, 1053, 1144, 2269
PpuMI	RGGWCCY	1 cut(s)	936
PscI	ACATGT	1 cut(s)	2099
PshAI	GACNNNNGTC	2 cut(s)	830, 985
PshBI	ATTAAT	2 cut(s)	515, 1944
PsiI	TTATAA	4 cut(s)	1818, 2093, 2294, 2475
Psp5II	RGGWCCY	1 cut(s)	936
Psp6I	CCWGG	1 cut(s)	133
PspCI	CACGTG	3 cut(s)	985, 1019, 1053
PspEI	GGTNACC	3 cut(s)	179, 281, 1730
PspGI	CCWGG	1 cut(s)	133
PspN4I	GGNNCC	4 cut(s)	862, 938, 2343, 2577
PspPI	GGNCC	2 cut(s)	936, 1929
PspPPI	RGGWCCY	1 cut(s)	936
PsuI	RGATCY	1 cut(s)	1846
PvuI	CGATCG	1 cut(s)	1992
RsaI	GTAC	9 cut(s)	132, 397, 752, 862, 1093, 1146, 1251, 1592, 2156
RsaNI	GTAC	9 cut(s)	131, 396, 751, 861, 1092, 1145, 1250, 1591, 2155
RseI	CAYNNNNRTG	5 cut(s)	389, 607, 839, 1200, 2001
SacII	CCGCGG	1 cut(s)	1813
SapI	GCTCTTC	1 cut(s)	812
SatI	GCNGC	1 cut(s)	894
Sau3AI	GATC	9 cut(s)	1057, 1472, 1603, 1622, 1626, 1846, 1959, 1989, 1993
Sau96I	GGNCC	2 cut(s)	936, 1929
SchI	GAGTC	1 cut(s)	909
ScrFI	CCNGG	1 cut(s)	135
SduI	GDGCHC	2 cut(s)	228, 1678
SexAI	ACCWGGT	1 cut(s)	133
SfaNI	GCATC	5 cut(s)	1284, 1348, 1407, 1429, 1913
Sfr303I	CCGCGG	1 cut(s)	1813
SfuI	TTCGAA	1 cut(s)	461
SgrBI	CCGCGG	1 cut(s)	1813
SinI	GGWCC	1 cut(s)	936
SmiI	ATTTAAAT	1 cut(s)	1786
SmiMI	CAYNNNNRTG	5 cut(s)	389, 607, 839, 1200, 2001
SmlI	CTYRAG	3 cut(s)	886, 1679, 1963
SmoI	CTYRAG	3 cut(s)	886, 1679, 1963
SnaBI	TACGTA	1 cut(s)	2269
SpeI	ACTAGT	1 cut(s)	1477
SphI	GCATGC	1 cut(s)	1892
SsiI	CCGC	5 cut(s)	618, 1698, 1810, 1812, 2207
SspMI	CTAG	5 cut(s)	74, 960, 1107, 1217, 1478
StyD4I	CCNGG	1 cut(s)	133
SwaI	ATTTAAAT	1 cut(s)	1786
TaaI	ACNGT	8 cut(s)	40, 314, 930, 1739, 1755, 1769, 1795, 2145
TaiI	ACGT	7 cut(s)	987, 1021, 1055, 1146, 2271, 2410, 2500
TaqI	TCGA	9 cut(s)	461, 695, 1023, 1380, 1618, 1625, 1988, 1992, 2052
TaqII	GACCGA	2 cut(s)	178, 221
TatI	WGTACW	3 cut(s)	395, 1091, 1590
TfiI	GAWTC	5 cut(s)	241, 845, 1429, 1612, 2054
TscAI	CASTG	5 cut(s)	104, 133, 206, 260, 293
TseFI	GTSAC	7 cut(s)	190, 478, 689, 1225, 1454, 1954, 2408
TseI	GCWGC	1 cut(s)	893
Tsp45I	GTSAC	7 cut(s)	190, 478, 689, 1225, 1454, 1954, 2408
TspDTI	ATGAA	6 cut(s)	730, 1480, 2346, 2493, 2597, 2674
TspGWI	ACGGA	4 cut(s)	820, 1328, 1734, 1765
TspRI	CASTG	5 cut(s)	104, 133, 206, 260, 293
Vha464I	CTTAAG	2 cut(s)	886, 1679
VpaK11BI	GGWCC	1 cut(s)	936
VspI	ATTAAT	2 cut(s)	515, 1944
XagI	CCTNNNNNAGG	1 cut(s)	1220
XapI	RAATTY	4 cut(s)	115, 623, 1781, 2065
XbaI	TCTAGA	1 cut(s)	73
XceI	RCATGY	2 cut(s)	1892, 2103
XspI	CTAG	5 cut(s)	74, 960, 1107, 1217, 1478
Zsp2I	ATGCAT	2 cut(s)	1422, 1885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.