pycom03g04710

Protein TIC110, chloroplastic-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
3658262 .. 3663624
5363 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g04710.2

Sequence Viewer

Length: 3174 bp
ATGTCCATATCTTTTAGCTTCTCCAATCCTCAGTTTTCCTTTCCGTCAAACCTTATAAAAGTGTCCGATTCCAAACCCTGCAAAATCCCTTTTACTCCCTCCACCCTTCCCCCCTCCCATAACGACGTCGTCTCCCCTTTTCCCGCCACAGTGGGACCCATGAATCCCTCCACTCTCACTCCCCACCGCTCCGCTTTCCGCTCGCCCTTCCTCAACCCCATTTCTCTCCCCGCCGCAACCTCCGTACACTCCCGACGACGCCGTTTCATGGTCTCATTTCCCCGGAACTCTGCCGCCTCCTCGGAACAATCAGCAGATGCTTCACCGCCGCCTCCCGATGTCTTCGGCGGCAAGAGAGAGCTCACCGGTATCCAGCCCGTTGTGGAGAAGCTTTCGCCGCCCCTCCGGATAGTGACGTCGGCAATTGTGTTCGCTGGAGCTGTGGCTGCGGGTTATGGGTTGGGTCTCCGGTTGGGGAAGTCCCAAAACGCAGCTTATGGCGGTGCAGCGGTGCTTGGAGCCGCCGGTGGGGCCGCCTTATACGCTATGAACTCTTGTGCTCCCGAGGTCGCCGCGGTTGACTTGCACAATTACGTTGCCGGGTTCGACGACCCGAAAGCTGTTAAGAAGGAGGACATTGAAGGCATTGCGAGAAAATATGGTGTGAGCAAGCAAGACGAGGCGTTTAATGCCGAGCTCTGTGATTTGTACTGTCGTTTTGTCACTTCTGTTCTTCCTCCTGGAGCTCAAGAACTCAAAGGGGACGAAGTCGACACAATCGTCAGCTTCAAGAATTCTCTGGGAATCGATGACCCCGAAGCAGCTTCAATGCATATGGAGATTGGAAGGCGAATTTTCAGACAGAGGCTCGAGACTGACCGTGAGGGTGATCTAGAGCAGCGTCGGGCGTTTCAGAAGCTGATATATGTTTCGACTCTTGTGTTTGGGGATGCTTCATCTTTCCTCTTACCTTGGAAGCGTGTTTTCAAAGTTACTGATTCCCAGGTTGAGCTGGCTATCCGTGATAATGCCCAGCGTTTATACGCTTCCAAGTTAAAATCCGTTGGCAGAGATATTGGAGTAGAGCAGCTTGTTAAGCTTAAAGAAGCACAACTCATGTATCGGCTCTCTGACGAGCACGCAGAGGACTTGTTCAAGGAACATGCAAGAAAACTAGTTGAGGCAAATATTTCAGCAGCACTTCGTATACTCAAGTCCAGAACCAGATCAGCTGCTGGAATCATGGAAGTTGTGGAAGAGCTCGATAAAATGTTAGAACTCAATAGTTTGCTCATCTCACTAAAGAACCAGCCAGATGCAGCTCGCTTTGCACCTGGGGTTGGGCCGGTTTCTTTACTTGGTGGCGACTACGATGCTGATAGAAAGATGGATGACTTGAAGCTCCTCTTCAGAGCATATGTTACGGATTCTTTATCCACAGGTTGCTTGGAAGAGAGTAAGCTTTCGGCCTTGAATCAGTTAAGGAATATATTTGGTTTGGGCAAACGAGAGGCAGAATCCATTGTGCTTGATGTTACTTTGAAGGTATACCGTAAACGTCTTTCACAATCTGTTACATCGGGTGAGTTAGAAGCCGCAGACAGCAAAGCAGCCTTCCTTCAAAATATCTGTGAGGAGCTGCATTTTGATCCACAAAGAGCCAGCCAGATTCATGAAGAAATTTACCGGCAAAAGCTTCAGCAGTGTGTTGCTGATGGAGAGCTGAATGAGGATGATGTTGCTGTATTGTTAAGGCTACGGGTCATGCTTTGTATACCTCAGCAGACAGTTGAGGCTGCCCATTCAGATATCTGTGGCAGTTTGTTTGAAAAGGTTGTGAAGGACGCAATTGCATCTGGTGTTGATGGTTACGACGCTGATGTAAAACAAGCCGTGAGAAAGGCAGCTCATGGTCTGCGATTGTCTAGGGAGGCTGCCATGTCTATTGCTGGCAAGGCAGTAAGAAAGATTTTTATTAACTATGTAAAACGAGCGCGGTCAGTTGGTAGCCGTACTGAGTCTGCAAAAGAACTTAAAAAAATGATAGCCTTCAACACATTGGTTGTGACTGAATTGGTGGCAGACATAAAAGGGGAATCATCTGATTCCGCCACAGAAGAGCCAATAAAGGAGCCAGAGACAGAAGTCCTGGAGGATGAGGAATGGGAATCTATTCAGACACTTCGGAAGATTAGACCTGACAAGGAGCTTACTGCAAAGTTGGGGAAGCCCGGCCAGACTGAGATAACTCTTAAAGATGACCTGGAAGAAAGAGAGAGGACTGACCTATACAAAACATACTTGCTGTTTTGTATAACTGGGGAAGTGAAGAGGATTCCCTTTGGTGCTCAAATCACTACAAAGAAGGATGATTCAGAATATGTGCTACTAAATCAGCTTGGGGCGATATTGGGTTTAAGCATTACGGAGATAGTGGAAGTACACAGGAGCCTGGCCGAGCAAGCTTTCAGGCAACAGGCAGAGGTGATTTTAGCTGATGGACAATTGACAAAAGCCAGGGTAGAGCAACTTAATGAATTGCAGAAGCAAGTTGGCTTGCCTCCGCAGTACGTGGAAAAGATAATAAAGAATATAACTACTACAAAAATGGCAGCTGCGATTGAAACCGCTATTGGTCAGGGGAGGCTCAATATTAAGCAGATAAGAGAACTTAAAGAATCAAGTGTTAATTTAGACAGCATGATATCTAAGAGCTTGCGAGAAAGTCTGTTCAAAAAGACCGTGGATGAGATATTCTCATCAGGCACTGGAGAGTTTGATGAGGAAGAAGTCTATGAGAAAATCCCAGCAGATCTCAATATTAATGCTGAGAAGGCCAAGAATGTTGTTCGAGAGCTTGCACGGACCAGATTATCAAACTCACTGATTCAAGCTGTGTCACTTCTGAGGCAGAGAAATCGTCAAGGAGTGGTTTCCTCTCTTAATGACTTGCTAGCTTGCGACAAAGCTGTGCCTGCCAAGCCACTTTCATGGGAAGTTCCAGAGGAGCTGGCCGATCTCTTTGGCATATACATGAAAAGTGATGCGGCACCAGAGAAATTATCGCGCTTGCAGTATCTCTTGGGCATTAGTGACAGCATGGCCACTGCTCTCCTGGAGATGGGAGATAGATTACAAACCATCGGTGCGGAGGAGGAAAAGTTTGTATTCTGA

Protein Analysis

1058

Amino Acids

116.59

Weight (kDa)

5.8

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014042)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06950
fragaria_vesca FvH4_3g40080
malus_domestica MD03G1058800.v1.1 MD11G1060900.v1.1
prunus_persica Prupe.6G045000_v2.0.a1
pyrus_communis pycom03g04710 pycom11g05040
rosa_chinensis RchiOBHm_Chr5g0072271
rosa_laevigata RLG00000036290
rosa_multiflora Rmu_sc0000714.1_g000010
rosa_roxburghii Rroxscaffold_1G00009000
rosa_rugosa Rorug05G0417400
rosa_samantha Rh5AG473200 Rh5BG493500 Rh5CG517500 Rh5DG505400
rosa_wichuraiana Rw5G043970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 56
AasI GACNNNNNNGTC 1 cut(s) 779
AatII GACGTC 2 cut(s) 129, 419
AccB1I GGYRCC 1 cut(s) 3049
AccBSI CCGCTC 2 cut(s) 189, 201
AccI GTMKAC 4 cut(s) 771, 1207, 1548, 1774
AccII CGCG 3 cut(s) 575, 1996, 3067
AccIII TCCGGA 1 cut(s) 405
AclWI GGATC 1 cut(s) 1643
AcoI YGGCCR 4 cut(s) 2233, 2454, 3012, 3102
AcsI RAATTY 3 cut(s) 793, 852, 1680
AcuI CTGAAG 2 cut(s) 1393, 1682
AcyI GRCGYC 3 cut(s) 126, 259, 416
AfaI GTAC 5 cut(s) 246, 710, 2014, 2442, 2570
AfiI CCNNNNNNNGG 4 cut(s) 268, 528, 1340, 3121
AgeI ACCGGT 1 cut(s) 365
AhlI ACTAGT 1 cut(s) 1174
AjnI CCWGG 8 cut(s) 739, 1002, 1333, 2148, 2262, 2451, 2516, 3114
AjuI GAANNNNNNNTTGG 2 cut(s) 2616, 2648
Alw21I GWGCWC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
Alw26I GTCTC 5 cut(s) 136, 277, 470, 866, 2132
AlwI GGATC 1 cut(s) 1643
AlwNI CAGNNNCTG 3 cut(s) 919, 1235, 2768
Ama87I CYCGRG 2 cut(s) 563, 869
Aor13HI TCCGGA 1 cut(s) 405
AoxI GGCC 8 cut(s) 531, 1343, 1467, 2233, 2454, 2835, 3012, 3102
ApoI RAATTY 3 cut(s) 793, 852, 1680
AseI ATTAAT 1 cut(s) 2823
AsiGI ACCGGT 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 2172
AspLEI GCGC 2 cut(s) 1996, 3069
AspS9I GGNCC 4 cut(s) 155, 531, 1343, 2865
AsuC2I CCSGG 3 cut(s) 283, 601, 2232
AsuHPI GGTGA 5 cut(s) 315, 355, 899, 1595, 2497
AsuNHI GCTAGC 1 cut(s) 2953
AvaI CYCGRG 2 cut(s) 563, 869
AvaII GGWCC 2 cut(s) 155, 2865
BaeI ACNNNNGTAYC 2 cut(s) 1103, 1136
BalI TGGCCA 1 cut(s) 3104
BanI GGYRCC 1 cut(s) 3049
BanII GRGCYC 4 cut(s) 363, 699, 748, 1263
BbsI GAAGAC 1 cut(s) 334
Bbv12I GWGCWC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
BbvCI CCTCAGC 1 cut(s) 1779
BccI CCATC 6 cut(s) 1381, 1709, 1859, 2492, 3115, 3149
BceAI ACGGC 3 cut(s) 246, 1877, 1995
BcgI CGANNNNNNTGC 4 cut(s) 1355, 1389, 2900, 2934
BciT130I CCWGG 8 cut(s) 741, 1004, 1335, 2150, 2264, 2453, 2518, 3116
BciVI GTATCC 1 cut(s) 380
BcnI CCSGG 3 cut(s) 283, 601, 2232
BcoDI GTCTC 5 cut(s) 136, 277, 470, 866, 2132
BcuI ACTAGT 1 cut(s) 1174
BfaI CTAG 4 cut(s) 893, 1175, 1926, 2954
BfuI GTATCC 1 cut(s) 380
BglI GCCNNNNNGGC 1 cut(s) 530
BglII AGATCT 1 cut(s) 2812
Bme18I GGWCC 2 cut(s) 155, 2865
BmeT110I CYCGRG 2 cut(s) 563, 869
BmgT120I GGNCC 4 cut(s) 155, 531, 1343, 2865
BmiI GGNNCC 7 cut(s) 156, 157, 520, 532, 2133, 2450, 3051
BmrI ACTGGG 1 cut(s) 2328
BmsI GCATC 6 cut(s) 307, 940, 1306, 1363, 1862, 3034
BmtI GCTAGC 1 cut(s) 2957
BmuI ACTGGG 1 cut(s) 2328
BoxI GACNNNNGTC 1 cut(s) 2144
BpiI GAAGAC 1 cut(s) 334
BplI GAGNNNNNCTC 2 cut(s) 2741, 2773
BpmI CTGGAG 5 cut(s) 456, 762, 2171, 2790, 3137
Bpu10I CCTNAGC 1 cut(s) 1779
BpuEI CTTGAG 2 cut(s) 732, 1196
BpuMI CCSGG 3 cut(s) 283, 601, 2232
Bsa29I ATCGAT 1 cut(s) 807
BsaAI YACGTR 1 cut(s) 2572
BsaHI GRCGYC 3 cut(s) 126, 259, 416
BsaI GGTCTC 2 cut(s) 277, 470
BsaJI CCNNGG 9 cut(s) 281, 300, 564, 573, 971, 1002, 1334, 2517, 2742
BsaWI WCCGGW 3 cut(s) 365, 405, 468
BsaXI ACNNNNNCTCC 5 cut(s) 116, 146, 163, 193, 3146
Bsc4I CCNNNNNNNGG 4 cut(s) 268, 528, 1340, 3121
Bse118I RCCGGY 4 cut(s) 365, 524, 1345, 1686
Bse1I ACTGG 2 cut(s) 2323, 2773
Bse3DI GCAATG 1 cut(s) 645
BseAI TCCGGA 1 cut(s) 405
BseBI CCWGG 8 cut(s) 741, 1004, 1335, 2150, 2264, 2453, 2518, 3116
BseCI ATCGAT 1 cut(s) 807
BseDI CCNNGG 9 cut(s) 281, 300, 564, 573, 971, 1002, 1334, 2517, 2742
BseGI GGATG 6 cut(s) 955, 1396, 1738, 2161, 2374, 2752
BseLI CCNNNNNNNGG 4 cut(s) 268, 528, 1340, 3121
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 6 cut(s) 44, 1793, 2007, 2232, 2820, 2897
BseNI ACTGG 2 cut(s) 2323, 2773
BseRI GAGGAG 5 cut(s) 289, 1394, 1649, 3020, 3167
BseYI CCCAGC 2 cut(s) 1032, 2806
BsgI GTGCAG 1 cut(s) 525
Bsh1236I CGCG 3 cut(s) 575, 1996, 3067
BshFI GGCC 8 cut(s) 533, 1345, 1469, 2235, 2456, 2837, 3014, 3104
BshNI GGYRCC 1 cut(s) 3049
BshTI ACCGGT 1 cut(s) 365
BshVI ATCGAT 1 cut(s) 807
BsiHKAI GWGCWC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
BsiHKCI CYCGRG 2 cut(s) 563, 869
BsiSI CCGG 9 cut(s) 283, 366, 406, 469, 525, 600, 1346, 1687, 2232
BslFI GGGAC 3 cut(s) 168, 466, 776
BslI CCNNNNNNNGG 4 cut(s) 268, 528, 1340, 3121
BsmAI GTCTC 5 cut(s) 136, 277, 470, 866, 2132
BsmBI CGTCTC 1 cut(s) 136
BsmFI GGGAC 3 cut(s) 168, 466, 776
BsnI GGCC 8 cut(s) 533, 1345, 1469, 2235, 2456, 2837, 3014, 3104
Bso31I GGTCTC 2 cut(s) 277, 470
BsoBI CYCGRG 2 cut(s) 563, 869
Bsp1286I GDGCHC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
Bsp13I TCCGGA 1 cut(s) 405
Bsp143I GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
BspANI GGCC 8 cut(s) 533, 1345, 1469, 2235, 2456, 2837, 3014, 3104
BspCNI CTCAG 6 cut(s) 43, 1792, 2008, 2233, 2821, 2898
BspDI ATCGAT 1 cut(s) 807
BspEI TCCGGA 1 cut(s) 405
BspFNI CGCG 3 cut(s) 575, 1996, 3067
BspHI TCATGA 1 cut(s) 1672
BspLI GGNNCC 7 cut(s) 156, 157, 520, 532, 2133, 2450, 3051
BspOI GCTAGC 1 cut(s) 2957
BspPI GGATC 1 cut(s) 1643
BspQI GCTCTTC 2 cut(s) 1251, 2112
BspT107I GGYRCC 1 cut(s) 3049
BspTNI GGTCTC 2 cut(s) 277, 470
BsrBI CCGCTC 2 cut(s) 189, 201
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 4 cut(s) 365, 524, 1345, 1686
BsrI ACTGG 2 cut(s) 2323, 2773
BssAI RCCGGY 4 cut(s) 365, 524, 1345, 1686
BssECI CCNNGG 9 cut(s) 281, 300, 564, 573, 971, 1002, 1334, 2517, 2742
BssMI GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
BssNAI GTATAC 3 cut(s) 1208, 1549, 1775
BssNI GRCGYC 3 cut(s) 126, 259, 416
BssT1I CCWWGG 1 cut(s) 971
Bst1107I GTATAC 3 cut(s) 1208, 1549, 1775
Bst2UI CCWGG 8 cut(s) 741, 1004, 1335, 2150, 2264, 2453, 2518, 3116
Bst4CI ACNGT 6 cut(s) 151, 713, 881, 1553, 1789, 2743
Bst6I CTCTTC 5 cut(s) 1251, 1412, 1446, 2112, 2324
BstACI GRCGYC 3 cut(s) 126, 259, 416
BstBAI YACGTR 1 cut(s) 2572
BstDEI CTNAG 7 cut(s) 30, 1779, 2016, 2241, 2709, 2829, 2906
BstDSI CCRYGG 2 cut(s) 573, 2742
BstF5I GGATG 6 cut(s) 955, 1396, 1738, 2161, 2374, 2752
BstFNI CGCG 3 cut(s) 575, 1996, 3067
BstHHI GCGC 2 cut(s) 1996, 3069
BstKTI GATC 5 cut(s) 892, 1229, 1651, 2815, 3019
BstMAI GTCTC 5 cut(s) 136, 277, 470, 866, 2132
BstMBI GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
BstNI CCWGG 8 cut(s) 741, 1004, 1335, 2150, 2264, 2453, 2518, 3116
BstNSI RCATGY 1 cut(s) 1166
BstPAI GACNNNNGTC 1 cut(s) 2144
BstUI CGCG 3 cut(s) 575, 1996, 3067
BstV2I GAAGAC 1 cut(s) 334
BstX2I RGATCY 1 cut(s) 2812
BstXI CCANNNNNNTGG 1 cut(s) 2991
BstYI RGATCY 1 cut(s) 2812
BstZ17I GTATAC 3 cut(s) 1208, 1549, 1775
Bsu15I ATCGAT 1 cut(s) 807
BsuI GTATCC 1 cut(s) 380
BsuRI GGCC 8 cut(s) 533, 1345, 1469, 2235, 2456, 2837, 3014, 3104
BsuTUI ATCGAT 1 cut(s) 807
BtgI CCRYGG 2 cut(s) 573, 2742
BtsCI GGATG 6 cut(s) 955, 1396, 1738, 2161, 2374, 2752
BtsI GCAGTG 2 cut(s) 1709, 3105
BtsIMutI CAGTG 5 cut(s) 156, 1709, 2766, 2882, 3105
CaiI CAGNNNCTG 3 cut(s) 919, 1235, 2768
CciI TCATGA 1 cut(s) 1672
CfoI GCGC 2 cut(s) 1996, 3069
Cfr10I RCCGGY 4 cut(s) 365, 524, 1345, 1686
Cfr13I GGNCC 4 cut(s) 155, 531, 1343, 2865
Cfr42I CCGCGG 1 cut(s) 576
ClaI ATCGAT 1 cut(s) 807
CseI GACGC 4 cut(s) 267, 890, 1853, 1883
Csp6I GTAC 5 cut(s) 245, 709, 2013, 2441, 2569
CspAI ACCGGT 1 cut(s) 365
CviQI GTAC 5 cut(s) 245, 709, 2013, 2441, 2569
DdeI CTNAG 7 cut(s) 30, 1779, 2016, 2241, 2709, 2829, 2906
DpnI GATC 5 cut(s) 891, 1228, 1650, 2814, 3018
DpnII GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
DrdI GACNNNNNNGTC 1 cut(s) 779
DseDI GACNNNNNNGTC 1 cut(s) 779
EaeI YGGCCR 4 cut(s) 2233, 2454, 3012, 3102
Eam1104I CTCTTC 5 cut(s) 1251, 1412, 1446, 2112, 2324
EarI CTCTTC 5 cut(s) 1251, 1412, 1446, 2112, 2324
EciI GGCGGA 1 cut(s) 2098
Ecl136II GAGCTC 4 cut(s) 361, 697, 746, 1261
Eco130I CCWWGG 1 cut(s) 971
Eco24I GRGCYC 4 cut(s) 363, 699, 748, 1263
Eco31I GGTCTC 2 cut(s) 277, 470
Eco32I GATATC 2 cut(s) 1810, 2706
Eco47I GGWCC 2 cut(s) 155, 2865
Eco53kI GAGCTC 4 cut(s) 361, 697, 746, 1261
Eco57I CTGAAG 2 cut(s) 1393, 1682
Eco88I CYCGRG 2 cut(s) 563, 869
EcoICRI GAGCTC 4 cut(s) 361, 697, 746, 1261
EcoO109I RGGNCCY 1 cut(s) 155
EcoRI GAATTC 1 cut(s) 793
EcoRII CCWGG 8 cut(s) 739, 1002, 1333, 2148, 2262, 2451, 2516, 3114
EcoRV GATATC 2 cut(s) 1810, 2706
EcoT14I CCWWGG 1 cut(s) 971
EcoT22I ATGCAT 1 cut(s) 834
EcoT38I GRGCYC 4 cut(s) 363, 699, 748, 1263
ErhI CCWWGG 1 cut(s) 971
Esp3I CGTCTC 1 cut(s) 136
FalI AAGNNNNNCTT 2 cut(s) 1391, 1423
FaqI GGGAC 3 cut(s) 168, 466, 776
FauI CCCGC 3 cut(s) 151, 238, 442
FauNDI CATATG 2 cut(s) 834, 1417
FblI GTMKAC 4 cut(s) 771, 1207, 1548, 1774
FokI GGATG 6 cut(s) 962, 1403, 1745, 2168, 2381, 2759
FriOI GRGCYC 4 cut(s) 363, 699, 748, 1263
FspBI CTAG 4 cut(s) 893, 1175, 1926, 2954
GlaI GCGC 2 cut(s) 1995, 3068
GsaI CCCAGC 2 cut(s) 1036, 2810
GsuI CTGGAG 5 cut(s) 456, 762, 2171, 2790, 3137
HaeIII GGCC 8 cut(s) 533, 1345, 1469, 2235, 2456, 2837, 3014, 3104
HapII CCGG 9 cut(s) 283, 366, 406, 469, 525, 600, 1346, 1687, 2232
HgaI GACGC 4 cut(s) 267, 890, 1853, 1883
HhaI GCGC 2 cut(s) 1996, 3069
Hin1I GRCGYC 3 cut(s) 126, 259, 416
Hin6I GCGC 2 cut(s) 1994, 3067
HinP1I GCGC 2 cut(s) 1994, 3067
HincII GTYRAC 2 cut(s) 580, 772
HindII GTYRAC 2 cut(s) 580, 772
HindIII AAGCTT 5 cut(s) 389, 1097, 1460, 1694, 2463
HpaII CCGG 9 cut(s) 283, 366, 406, 469, 525, 600, 1346, 1687, 2232
HphI GGTGA 5 cut(s) 315, 355, 899, 1595, 2497
Hpy166II GTNNAC 8 cut(s) 247, 580, 772, 1208, 1549, 1556, 1775, 2443
Hpy8I GTNNAC 8 cut(s) 247, 580, 772, 1208, 1549, 1556, 1775, 2443
Hpy99I CGWCG 8 cut(s) 128, 131, 258, 261, 421, 611, 906, 1877
HpyCH4III ACNGT 6 cut(s) 151, 713, 881, 1553, 1789, 2743
HpyCH4IV ACGT 5 cut(s) 126, 416, 594, 1558, 2571
HpyF3I CTNAG 7 cut(s) 30, 1779, 2016, 2241, 2709, 2829, 2906
HpySE526I ACGT 5 cut(s) 126, 416, 594, 1558, 2571
Hsp92I GRCGYC 3 cut(s) 126, 259, 416
HspAI GCGC 2 cut(s) 1994, 3067
KflI GGGWCCC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 405
KspI CCGCGG 1 cut(s) 576
Kzo9I GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
LguI GCTCTTC 2 cut(s) 1251, 2112
LweI GCATC 6 cut(s) 307, 940, 1306, 1363, 1862, 3034
MaeI CTAG 4 cut(s) 893, 1175, 1926, 2954
MaeII ACGT 5 cut(s) 126, 416, 594, 1558, 2571
MalI GATC 5 cut(s) 891, 1228, 1650, 2814, 3018
MbiI CCGCTC 2 cut(s) 189, 201
MboI GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
MfeI CAATTG 3 cut(s) 423, 1848, 2504
MflI RGATCY 1 cut(s) 2812
MhlI GDGCHC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
MlsI TGGCCA 1 cut(s) 3104
MluNI TGGCCA 1 cut(s) 3104
MlyI GAGTC 2 cut(s) 928, 2027
Mox20I TGGCCA 1 cut(s) 3104
Mph1103I ATGCAT 1 cut(s) 834
MroI TCCGGA 1 cut(s) 405
MroXI GAANNNNTTC 1 cut(s) 2172
MscI TGGCCA 1 cut(s) 3104
MslI CAYNNNNRTG 2 cut(s) 2989, 3032
Msp20I TGGCCA 1 cut(s) 3104
MspA1I CMGCKG 4 cut(s) 509, 575, 1232, 2615
MspI CCGG 9 cut(s) 283, 366, 406, 469, 525, 600, 1346, 1687, 2232
MunI CAATTG 3 cut(s) 423, 1848, 2504
MvaI CCWGG 8 cut(s) 741, 1004, 1335, 2150, 2264, 2453, 2518, 3116
MvnI CGCG 3 cut(s) 575, 1996, 3067
NciI CCSGG 3 cut(s) 283, 601, 2232
NdeI CATATG 2 cut(s) 834, 1417
NdeII GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
NheI GCTAGC 1 cut(s) 2953
NlaIV GGNNCC 7 cut(s) 156, 157, 520, 532, 2133, 2450, 3051
NmeAIII GCCGAG 2 cut(s) 718, 2482
NmuCI GTSAC 5 cut(s) 412, 721, 2065, 2898, 3092
NsiI ATGCAT 1 cut(s) 834
NspI RCATGY 1 cut(s) 1166
PaeR7I CTCGAG 1 cut(s) 869
PagI TCATGA 1 cut(s) 1672
PciSI GCTCTTC 2 cut(s) 1251, 2112
PcsI WCGNNNNNNNCGW 2 cut(s) 777, 813
PdmI GAANNNNTTC 1 cut(s) 2172
PflFI GACNNNGTC 2 cut(s) 128, 767
PfoI TCCNGGA 3 cut(s) 739, 2148, 3114
PinAI ACCGGT 1 cut(s) 365
PleI GAGTC 2 cut(s) 928, 2026
PpsI GAGTC 2 cut(s) 928, 2026
Ppu21I YACGTR 1 cut(s) 2572
PpuMI RGGWCCY 1 cut(s) 155
PshAI GACNNNNGTC 1 cut(s) 2144
PshBI ATTAAT 1 cut(s) 2823
PsiI TTATAA 1 cut(s) 56
Psp124BI GAGCTC 4 cut(s) 363, 699, 748, 1263
Psp5II RGGWCCY 1 cut(s) 155
Psp6I CCWGG 8 cut(s) 739, 1002, 1333, 2148, 2262, 2451, 2516, 3114
PspFI CCCAGC 2 cut(s) 1032, 2806
PspGI CCWGG 8 cut(s) 739, 1002, 1333, 2148, 2262, 2451, 2516, 3114
PspN4I GGNNCC 7 cut(s) 156, 157, 520, 532, 2133, 2450, 3051
PspPI GGNCC 4 cut(s) 155, 531, 1343, 2865
PspPPI RGGWCCY 1 cut(s) 155
PstNI CAGNNNCTG 3 cut(s) 919, 1235, 2768
PsuI RGATCY 1 cut(s) 2812
PsyI GACNNNGTC 2 cut(s) 128, 767
PvuII CAGCTG 2 cut(s) 1232, 2615
RsaI GTAC 5 cut(s) 246, 710, 2014, 2442, 2570
RsaNI GTAC 5 cut(s) 245, 709, 2013, 2441, 2569
RseI CAYNNNNRTG 2 cut(s) 2989, 3032
SacI GAGCTC 4 cut(s) 363, 699, 748, 1263
SacII CCGCGG 1 cut(s) 576
SalI GTCGAC 1 cut(s) 770
SapI GCTCTTC 2 cut(s) 1251, 2112
Sau3AI GATC 5 cut(s) 889, 1226, 1648, 2812, 3016
Sau96I GGNCC 4 cut(s) 155, 531, 1343, 2865
SchI GAGTC 2 cut(s) 928, 2027
SduI GDGCHC 7 cut(s) 363, 562, 699, 748, 1140, 1263, 2350
SfaNI GCATC 6 cut(s) 307, 940, 1306, 1363, 1862, 3034
Sfr274I CTCGAG 1 cut(s) 869
Sfr303I CCGCGG 1 cut(s) 576
SgrAI CRCCGGYG 1 cut(s) 524
SgrBI CCGCGG 1 cut(s) 576
SinI GGWCC 2 cut(s) 155, 2865
SlaI CTCGAG 1 cut(s) 869
SmiMI CAYNNNNRTG 2 cut(s) 2989, 3032
SmlI CTYRAG 3 cut(s) 747, 869, 1211
SmoI CTYRAG 3 cut(s) 747, 869, 1211
SpeI ACTAGT 1 cut(s) 1174
SspI AATATT 3 cut(s) 1189, 2653, 2821
SspMI CTAG 4 cut(s) 893, 1175, 1926, 2954
SstI GAGCTC 4 cut(s) 363, 699, 748, 1263
StyI CCWWGG 1 cut(s) 971
TaaI ACNGT 6 cut(s) 151, 713, 881, 1553, 1789, 2743
TaiI ACGT 5 cut(s) 129, 419, 597, 1561, 2574
TaqI TCGA 7 cut(s) 606, 771, 807, 870, 932, 1263, 2851
TatI WGTACW 2 cut(s) 708, 2440
TscAI CASTG 5 cut(s) 156, 1709, 2773, 2889, 3112
TseFI GTSAC 5 cut(s) 412, 721, 2065, 2898, 3092
Tsp45I GTSAC 5 cut(s) 412, 721, 2065, 2898, 3092
TspDTI ATGAA 9 cut(s) 176, 256, 563, 945, 1661, 1689, 2550, 2979, 3050
TspGWI ACGGA 7 cut(s) 33, 232, 1010, 1051, 1439, 2441, 2878
TspRI CASTG 5 cut(s) 156, 1709, 2773, 2889, 3112
Tth111I GACNNNGTC 2 cut(s) 128, 767
VpaK11BI GGWCC 2 cut(s) 155, 2865
VspI ATTAAT 1 cut(s) 2823
XapI RAATTY 3 cut(s) 793, 852, 1680
XbaI TCTAGA 1 cut(s) 892
XceI RCATGY 1 cut(s) 1166
XcmI CCANNNNNNNNNTGG 2 cut(s) 1444, 3112
XhoI CTCGAG 1 cut(s) 869
XmiI GTMKAC 4 cut(s) 771, 1207, 1548, 1774
XmnI GAANNNNTTC 1 cut(s) 2172
XspI CTAG 4 cut(s) 893, 1175, 1926, 2954
ZraI GACGTC 2 cut(s) 127, 417
Zsp2I ATGCAT 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.