Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0014042

Physical Location & Seq

Genomic Coordinates Forward (+)

3915797 .. 3921259

Gene Structure 5463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g05040.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3330 bp

ATGACTTTGAAAAAAAAAGAGTTTGATCCTAAATTTTATAGGAATTGTTATTGGCACTCAAAATTTTTCATTTTACACTTCAAACTTTCTATATTTAAAAAAAAATACCCAACGGCCAACAAACTGTTTCACTTTTGTCGTCTTCCCCAATTATTCCGCCCTGTTATCTTCTCCAATCCTCCTCAGTTTTCTTTTCCGTCAAACCCAATAAAAGCCTCCGATCCCAAACCCTACCAAAGCCCTTTAACTCCCTCCACACTCCCCCCCTCCCCAAACGACGCCGTCTCTCCTTATCCTGCCGCAGTGGGACCCATGAATCCCTCCACTCTCACTTCCCAGCGCTCCGCTCTCCGCTTGCCGCTCCTCAACCCCATCTCTCTCCCCGCCGCAGCCTCCGTACAATCCCGAAGACGCCGTTTCAGGGCCTCATTTCCCCGGAACTCTGCCGCCCCCTCGGAACAATCAGCAGACGCCGCCTCACCGCCGCCTCACGATGTCTTCGGCGGTAAGAGAGAGCTCACTGGCGTACAGCCCGTTGTCGAGAAGCTGTCGCCGCCGCTCCGGATAGTGACCTCGGCAATTGTGTTCGCCGGAGCTGTGGCTGCTGGGTACGGGTTGGGTCTCCGGTTGGGGAAATCCCAAAACGCAGCGTATGGTGGTGCAGCGGTGCTCGGAGCCGCCGGTGGAGCAGCAGTCTACGCTTTGAACTCTTGCGCTCCCGAGGTCGCCGCCGTCGATTTGCACAATTACGTTGCTGGGTTGGACGACCCGAAAGCTGTTAAGAAGGAGGACATCGAAGGCATTGCGAGAAAATTTGGTGTGAGCAAGCAAGACGAGGCGTTTAATGCCGAGCTCTGTGATTTGTACTGTCGTTTTGTCACTGCTGTTCTTCCTCCTGGAGCTCAAGAACTCAAAGGCGACGAAGCGGACACCATCGTCAGCTTCAAGAATTCTCTGGGAATCGATGACCCGGAAGCAGCTTCAATGCATATGGAGATTGGTAGGCGAATTTTCAGACAGAGGCTTGAGACCGACCGCGAGGGTGATCTAGAGCAGCGTCGGGCATTTCAGAAGCTGATATATGTTTCGACTCTTGTGTTTGGGGACGCTTCATCTTTCCTCTTACCTTGGAAGCGTGTCTTCAAAGTTACCGATTCCCAGGTTGAGCTGGCTATCCGTGACAATGCCCAGCGTTTATATGCTTCCAAGCTAAAATCTGTTGGCAGAGATATTGGTGCAGAGCAGCTTGTTAAGCTTAAGGAAGCACAACGCATTTATCGGCTCTCTGACGAGCACGCAGAAGACTTGTTCAAAGAACACGCAAGAAAACTAGTTGAGGCAAATATATCAGCAGCACTTCGTATGCTCAAATCCAGAACCAGATCAGCCACTGGAATCACGGAAGTTGTGCAAGAGCTTGATAAAATGCTGGAACTCAATAATTTGCTCATCTCACTAAAGAACCATCCAGATGCAGCTCGCTTTGCACCTGGGCTTGGGCCAGTTTCTTTACTTGGTGGCAACTACGATGCTGATAGAAATATGGACGACTTGAAGCTCCTCTTCAGAGCTTATGTTACGGATTCTTTATCCACAGGTCGCTTGGAAGAGAGTAAGGATTCCGCGTTGAATCAGTTAAGGAATATATTTGGTTTAGGGAAACGAGAGGCAGAATCCATTGTGCTTGATGTTACTTTGAAGGTTTACCGTAAACGTCTTTCACAGTCTGTTACATCGGGTGATTTAGAAGCAGCAGACAGCAAAGCAGCCTTCCTTCAAAATATCTGTGAGGAGCTGCATTTTGATCCACAAAGAGCCAGCCAGATTCATGAAGAAATATACCGACAAAAGCTTCAGCAGTGTGTTGCTGATGGAGAGCTGAATGATGATGATGTTGCTGCATTGTTAAGGCTACGGGTCATGCTTTGTATTCCTCAGCAGACTGTTGAGGCTGCCCATTCAGATATCTGTGGCAGTTTGTTTGAAAAGGTTGTGAAGGATGCAATTGCATCTGGTGTTGATGGTTATGACGCTGATGTAAAACAAGCTGTGAGAAAGGCAGCTCACGGTCTGCGATTGTCTAGGGAGGCTGCCATGTCTATTGCTGGCAAGGCAGTAAGAAAGATTTTTATTAACTATGTAAAACGAGCACGGTCAGTTGGTAGCCGTACTGAGTCTGCAAAAGAACTTAAAAAGATGATAGCCTTCAACACATTGGTTGTGACTGAATTGGTAGCAGACATAAAAGGGGAATCATCTGATTCCGCCACAGAAGAGCCAATAAAGGAGCCAGAGCCAGATGTCCTGGAGGATGAGGAATGGGAATCTATTCAGACACTTAGAAAGATTAGACCTGACAAGGAGCTTGCTGCAAAGTTGGGGAAGCCCGGCCAGACTGAGATTACTCTTAAAGATGACCTGGAAGAAAGAGAGAGGACTGACCTATACAAAACATACTTATTGTTTTGTATAACTGGGGAAGTGAAGAGGATTCCGTTTGGTGCTCAGATCACTACAAAGAAGGATGATTCAGAATATGTGCTACTAAATCAGCTTGGGGCGATATTGGGCTTAAGCACTACGGAGATAGTGGAAGTACACAGGAGCCTGGCCGAGCAAGCTTTCAGGCAACAGGCAGAGGTAATTTTGGCCGATGGACAATTGACAAAAGCAAGGGTAGAGCAACTTAATGAATTGCAGAAGCAAGTTGGCTTGCCTCCACAGTATGCGGAAAAGATAATAAAGAATATAACCACTACAAAAATGGCAGCTGCGATTGAAACGGCTATTGGTCAGGGGAGGCTCAATATTAAGCAGATAAGAGAACTTAAAGAATCAAGTGTTAATTTAGACAGCATGATATCTGAGAGCTTGCGAGAAAGTTTGTTCAAAAAGACCGTGGATGAGATATTCTCATCGGGCACTGGAGAGTTTGATGAGGAAGAAGTCTATGAGAAAATCCCAGCAGATCTCAATATTAATGCTGAGAAGGCCAAGAATGTTGTTCGAGAGCTTGCACAGACAAGATTATCAAACTCATTGATTCAAGCTGTGTCACTTCTGAGGCAGAGAAATCGTCAAGGAGTGGTATCCTCTCTTAATGACTTGCTGGCTTGTGACAAAGCTGTGCCTGCCGAGCCACTTTCATGGGATGTTCCAGAGGAGCTGGCCGATCTCTTCGCTATATACATGAAAAGTGGTGCGGCACCTGAGAAATTATCGCGCTTGCAGTATCTCCTGGGCATTAGTGATAGCATGGCTGCTACTCTCCAGGAGATGGGAGATAGATTACAAACCATCGGTGCGGAGGAGGAAAAGTTTGTATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0031090 GO:0031897 GO:0031967 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tic110

Protein Analysis

1110

Amino Acids

122.74

Weight (kDa)

6.62

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06950
fragaria_vesca	FvH4_3g40080
malus_domestica	MD03G1058800.v1.1 MD11G1060900.v1.1
prunus_persica	Prupe.6G045000_v2.0.a1
pyrus_communis	pycom03g04710 pycom11g05040
rosa_chinensis	RchiOBHm_Chr5g0072271
rosa_laevigata	RLG00000036290
rosa_multiflora	Rmu_sc0000714.1_g000010
rosa_roxburghii	Rroxscaffold_1G00009000
rosa_rugosa	Rorug05G0417400
rosa_samantha	Rh5AG473200 Rh5BG493500 Rh5CG517500 Rh5DG505400
rosa_wichuraiana	Rw5G043970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	935
AccB1I	GGYRCC	1 cut(s)	3205
AccB7I	CCANNNNNTGG	1 cut(s)	3277
AccBSI	CCGCTC	3 cut(s)	347, 361, 559
AccI	GTMKAC	1 cut(s)	696
AccII	CGCG	3 cut(s)	1038, 1625, 3223
AccIII	TCCGGA	1 cut(s)	561
AclWI	GGATC	3 cut(s)	20, 215, 1799
AcoI	YGGCCR	5 cut(s)	114, 2389, 2610, 2649, 3168
AcsI	RAATTY	5 cut(s)	32, 62, 812, 949, 1008
AcuI	CTGAAG	2 cut(s)	1549, 1838
AcyI	GRCGYC	3 cut(s)	279, 412, 471
AfaI	GTAC	6 cut(s)	399, 528, 611, 866, 2170, 2598
AfeI	AGCGCT	1 cut(s)	341
AfiI	CCNNNNNNNGG	3 cut(s)	421, 1496, 3277
AflII	CTTAAG	2 cut(s)	1256, 2572
AhlI	ACTAGT	1 cut(s)	1330
AjnI	CCWGG	8 cut(s)	895, 1158, 1489, 2304, 2418, 2607, 3237, 3270
AjuI	GAANNNNNNNTTGG	2 cut(s)	2772, 2804
Alw21I	GWGCWC	7 cut(s)	519, 672, 855, 904, 1296, 2152, 2506
Alw26I	GTCTC	3 cut(s)	289, 626, 1022
AlwI	GGATC	3 cut(s)	20, 215, 1799
AlwNI	CAGNNNCTG	2 cut(s)	1075, 1391
Ama87I	CYCGRG	1 cut(s)	719
Aor13HI	TCCGGA	1 cut(s)	561
Aor51HI	AGCGCT	1 cut(s)	341
AoxI	GGCC	8 cut(s)	114, 423, 1499, 2389, 2610, 2649, 2991, 3168
ApoI	RAATTY	5 cut(s)	32, 62, 812, 949, 1008
AseI	ATTAAT	1 cut(s)	2979
Asp700I	GAANNNNTTC	1 cut(s)	2328
AspLEI	GCGC	3 cut(s)	342, 716, 3225
AspS9I	GGNCC	3 cut(s)	308, 423, 1499
AsuC2I	CCSGG	3 cut(s)	436, 971, 2388
AsuHPI	GGTGA	3 cut(s)	471, 1055, 1751
AvaI	CYCGRG	1 cut(s)	719
AvaII	GGWCC	1 cut(s)	308
BaeGI	GKGCMC	1 cut(s)	2924
BanI	GGYRCC	1 cut(s)	3205
BanII	GRGCYC	3 cut(s)	519, 855, 904
BbsI	GAAGAC	5 cut(s)	134, 415, 490, 1132, 1308
Bbv12I	GWGCWC	7 cut(s)	519, 672, 855, 904, 1296, 2152, 2506
BbvCI	CCTCAGC	1 cut(s)	1935
BccI	CCATC	8 cut(s)	380, 941, 1473, 1865, 2015, 2648, 3271, 3305
BceAI	ACGGC	6 cut(s)	129, 266, 399, 716, 2151, 2799
BcgI	CGANNNNNNTGC	4 cut(s)	785, 819, 3056, 3090
BciT130I	CCWGG	8 cut(s)	897, 1160, 1491, 2306, 2420, 2609, 3239, 3272
BciVI	GTATCC	1 cut(s)	3100
BcnI	CCSGG	3 cut(s)	436, 971, 2388
BcoDI	GTCTC	3 cut(s)	289, 626, 1022
BcuI	ACTAGT	1 cut(s)	1330
BfaI	CTAG	3 cut(s)	1049, 1331, 2082
BfoI	RGCGCY	1 cut(s)	343
BfrI	CTTAAG	2 cut(s)	1256, 2572
BfuI	GTATCC	1 cut(s)	3100
BglII	AGATCT	1 cut(s)	2968
Bme18I	GGWCC	1 cut(s)	308
BmeT110I	CYCGRG	1 cut(s)	719
BmgT120I	GGNCC	3 cut(s)	308, 423, 1499
BmiI	GGNNCC	6 cut(s)	309, 310, 676, 2289, 2606, 3207
BmrI	ACTGGG	1 cut(s)	2484
BmsI	GCATC	4 cut(s)	1462, 1519, 1990, 2018
BmuI	ACTGGG	1 cut(s)	2484
BpiI	GAAGAC	5 cut(s)	134, 415, 490, 1132, 1308
BplI	GAGNNNNNCTC	2 cut(s)	2897, 2929
BpmI	CTGGAG	4 cut(s)	918, 2327, 2946, 3254
Bpu10I	CCTNAGC	1 cut(s)	1935
BpuEI	CTTGAG	2 cut(s)	888, 1046
BpuMI	CCSGG	3 cut(s)	436, 971, 2388
Bsa29I	ATCGAT	1 cut(s)	963
BsaHI	GRCGYC	3 cut(s)	279, 412, 471
BsaI	GGTCTC	2 cut(s)	626, 1022
BsaJI	CCNNGG	9 cut(s)	434, 453, 573, 720, 1127, 1158, 1490, 2898, 3238
BsaWI	WCCGGW	2 cut(s)	561, 624
BsaXI	ACNNNNNCTCC	3 cut(s)	678, 708, 3302
Bsc4I	CCNNNNNNNGG	3 cut(s)	421, 1496, 3277
Bse118I	RCCGGY	1 cut(s)	680
Bse1I	ACTGG	5 cut(s)	526, 1396, 1502, 2479, 2929
Bse3DI	GCAATG	1 cut(s)	801
BseAI	TCCGGA	1 cut(s)	561
BseBI	CCWGG	8 cut(s)	897, 1160, 1491, 2306, 2420, 2609, 3239, 3272
BseCI	ATCGAT	1 cut(s)	963
BseDI	CCNNGG	9 cut(s)	434, 453, 573, 720, 1127, 1158, 1490, 2898, 3238
BseGI	GGATG	6 cut(s)	1465, 2005, 2317, 2530, 2908, 3157
BseLI	CCNNNNNNNGG	3 cut(s)	421, 1496, 3277
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	9 cut(s)	197, 1949, 2163, 2388, 2519, 2856, 2976, 3053, 3201
BseNI	ACTGG	5 cut(s)	526, 1396, 1502, 2479, 2929
BseRI	GAGGAG	6 cut(s)	171, 353, 1550, 1805, 3176, 3323
BseSI	GKGCMC	1 cut(s)	2924
BseYI	CCCAGC	5 cut(s)	336, 605, 755, 1188, 2962
BsgI	GTGCAG	2 cut(s)	681, 1257
Bsh1236I	CGCG	3 cut(s)	1038, 1625, 3223
Bsh1285I	CGRYCG	1 cut(s)	1036
BshFI	GGCC	8 cut(s)	116, 425, 1501, 2391, 2612, 2651, 2993, 3170
BshNI	GGYRCC	1 cut(s)	3205
BshVI	ATCGAT	1 cut(s)	963
BsiEI	CGRYCG	1 cut(s)	1036
BsiHKAI	GWGCWC	7 cut(s)	519, 672, 855, 904, 1296, 2152, 2506
BsiHKCI	CYCGRG	1 cut(s)	719
BsiSI	CCGG	7 cut(s)	436, 562, 591, 625, 681, 971, 2388
BslFI	GGGAC	2 cut(s)	321, 1118
BslI	CCNNNNNNNGG	3 cut(s)	421, 1496, 3277
BsmAI	GTCTC	3 cut(s)	289, 626, 1022
BsmBI	CGTCTC	1 cut(s)	289
BsmFI	GGGAC	2 cut(s)	321, 1118
BsnI	GGCC	8 cut(s)	116, 425, 1501, 2391, 2612, 2651, 2993, 3170
Bso31I	GGTCTC	2 cut(s)	626, 1022
BsoBI	CYCGRG	1 cut(s)	719
Bsp1286I	GDGCHC	8 cut(s)	519, 672, 855, 904, 1296, 2152, 2506, 2924
Bsp13I	TCCGGA	1 cut(s)	561
Bsp143I	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
BspANI	GGCC	8 cut(s)	116, 425, 1501, 2391, 2612, 2651, 2993, 3170
BspCNI	CTCAG	9 cut(s)	196, 1948, 2164, 2389, 2518, 2857, 2977, 3054, 3202
BspDI	ATCGAT	1 cut(s)	963
BspEI	TCCGGA	1 cut(s)	561
BspFNI	CGCG	3 cut(s)	1038, 1625, 3223
BspHI	TCATGA	1 cut(s)	1828
BspLI	GGNNCC	6 cut(s)	309, 310, 676, 2289, 2606, 3207
BspPI	GGATC	3 cut(s)	20, 215, 1799
BspQI	GCTCTTC	1 cut(s)	2268
BspT107I	GGYRCC	1 cut(s)	3205
BspTI	CTTAAG	2 cut(s)	1256, 2572
BspTNI	GGTCTC	2 cut(s)	626, 1022
BsrBI	CCGCTC	3 cut(s)	347, 361, 559
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	1 cut(s)	680
BsrI	ACTGG	5 cut(s)	526, 1396, 1502, 2479, 2929
BssAI	RCCGGY	1 cut(s)	680
BssECI	CCNNGG	9 cut(s)	434, 453, 573, 720, 1127, 1158, 1490, 2898, 3238
BssMI	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
BssNI	GRCGYC	3 cut(s)	279, 412, 471
BssT1I	CCWWGG	1 cut(s)	1127
Bst2UI	CCWGG	8 cut(s)	897, 1160, 1491, 2306, 2420, 2609, 3239, 3272
Bst4CI	ACNGT	9 cut(s)	126, 869, 1709, 1725, 1945, 2069, 2154, 2724, 2899
Bst6I	CTCTTC	5 cut(s)	1568, 1602, 2268, 2480, 3182
BstACI	GRCGYC	3 cut(s)	279, 412, 471
BstAFI	CTTAAG	2 cut(s)	1256, 2572
BstDSI	CCRYGG	1 cut(s)	2898
BstF5I	GGATG	6 cut(s)	1465, 2005, 2317, 2530, 2908, 3157
BstFNI	CGCG	3 cut(s)	1038, 1625, 3223
BstH2I	RGCGCY	1 cut(s)	343
BstHHI	GCGC	3 cut(s)	342, 716, 3225
BstKTI	GATC	8 cut(s)	28, 223, 1048, 1385, 1807, 2511, 2971, 3175
BstMAI	GTCTC	3 cut(s)	289, 626, 1022
BstMBI	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
BstMCI	CGRYCG	1 cut(s)	1036
BstNI	CCWGG	8 cut(s)	897, 1160, 1491, 2306, 2420, 2609, 3239, 3272
BstSLI	GKGCMC	1 cut(s)	2924
BstUI	CGCG	3 cut(s)	1038, 1625, 3223
BstV2I	GAAGAC	5 cut(s)	134, 415, 490, 1132, 1308
BstX2I	RGATCY	1 cut(s)	2968
BstXI	CCANNNNNNTGG	1 cut(s)	3147
BstYI	RGATCY	1 cut(s)	2968
Bsu15I	ATCGAT	1 cut(s)	963
BsuI	GTATCC	1 cut(s)	3100
BsuRI	GGCC	8 cut(s)	116, 425, 1501, 2391, 2612, 2651, 2993, 3170
BsuTUI	ATCGAT	1 cut(s)	963
BtgI	CCRYGG	1 cut(s)	2898
BtsCI	GGATG	6 cut(s)	1465, 2005, 2317, 2530, 2908, 3157
BtsI	GCAGTG	3 cut(s)	309, 879, 1865
BtsIMutI	CAGTG	6 cut(s)	309, 519, 879, 1389, 1865, 2922
CaiI	CAGNNNCTG	2 cut(s)	1075, 1391
CciI	TCATGA	1 cut(s)	1828
CfoI	GCGC	3 cut(s)	342, 716, 3225
Cfr10I	RCCGGY	1 cut(s)	680
Cfr13I	GGNCC	3 cut(s)	308, 423, 1499
ClaI	ATCGAT	1 cut(s)	963
CseI	GACGC	6 cut(s)	287, 420, 479, 1046, 1115, 2039
Csp6I	GTAC	6 cut(s)	398, 527, 610, 865, 2169, 2597
CviAII	CATG	8 cut(s)	313, 1829, 1921, 2095, 2857, 3147, 3190, 3256
CviQI	GTAC	6 cut(s)	398, 527, 610, 865, 2169, 2597
DpnI	GATC	8 cut(s)	27, 222, 1047, 1384, 1806, 2510, 2970, 3174
DpnII	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
DraI	TTTAAA	1 cut(s)	97
DrdI	GACNNNNNNGTC	1 cut(s)	935
DseDI	GACNNNNNNGTC	1 cut(s)	935
EaeI	YGGCCR	5 cut(s)	114, 2389, 2610, 2649, 3168
Eam1104I	CTCTTC	5 cut(s)	1568, 1602, 2268, 2480, 3182
EarI	CTCTTC	5 cut(s)	1568, 1602, 2268, 2480, 3182
EciI	GGCGGA	2 cut(s)	146, 2254
Ecl136II	GAGCTC	3 cut(s)	517, 853, 902
Eco130I	CCWWGG	1 cut(s)	1127
Eco24I	GRGCYC	3 cut(s)	519, 855, 904
Eco31I	GGTCTC	2 cut(s)	626, 1022
Eco32I	GATATC	2 cut(s)	1966, 2862
Eco47I	GGWCC	1 cut(s)	308
Eco47III	AGCGCT	1 cut(s)	341
Eco53kI	GAGCTC	3 cut(s)	517, 853, 902
Eco57I	CTGAAG	2 cut(s)	1549, 1838
Eco88I	CYCGRG	1 cut(s)	719
EcoICRI	GAGCTC	3 cut(s)	517, 853, 902
EcoO109I	RGGNCCY	2 cut(s)	308, 423
EcoRI	GAATTC	1 cut(s)	949
EcoRII	CCWGG	8 cut(s)	895, 1158, 1489, 2304, 2418, 2607, 3237, 3270
EcoRV	GATATC	2 cut(s)	1966, 2862
EcoT14I	CCWWGG	1 cut(s)	1127
EcoT22I	ATGCAT	1 cut(s)	990
EcoT38I	GRGCYC	3 cut(s)	519, 855, 904
ErhI	CCWWGG	1 cut(s)	1127
Esp3I	CGTCTC	1 cut(s)	289
FaeI	CATG	8 cut(s)	316, 1832, 1924, 2098, 2860, 3150, 3193, 3259
FalI	AAGNNNNNCTT	4 cut(s)	1124, 1156, 1547, 1579
FaqI	GGGAC	2 cut(s)	321, 1118
FatI	CATG	8 cut(s)	312, 1828, 1920, 2094, 2856, 3146, 3189, 3255
FauI	CCCGC	1 cut(s)	391
FauNDI	CATATG	1 cut(s)	990
FblI	GTMKAC	1 cut(s)	696
FokI	GGATG	6 cut(s)	1452, 2012, 2324, 2537, 2915, 3164
FriOI	GRGCYC	3 cut(s)	519, 855, 904
FspBI	CTAG	3 cut(s)	1049, 1331, 2082
GlaI	GCGC	3 cut(s)	341, 715, 3224
GsaI	CCCAGC	5 cut(s)	340, 609, 759, 1192, 2966
GsuI	CTGGAG	4 cut(s)	918, 2327, 2946, 3254
HaeII	RGCGCY	1 cut(s)	343
HaeIII	GGCC	8 cut(s)	116, 425, 1501, 2391, 2612, 2651, 2993, 3170
HapII	CCGG	7 cut(s)	436, 562, 591, 625, 681, 971, 2388
HgaI	GACGC	6 cut(s)	287, 420, 479, 1046, 1115, 2039
HhaI	GCGC	3 cut(s)	342, 716, 3225
Hin1I	GRCGYC	3 cut(s)	279, 412, 471
Hin1II	CATG	8 cut(s)	316, 1832, 1924, 2098, 2860, 3150, 3193, 3259
Hin6I	GCGC	3 cut(s)	340, 714, 3223
HinP1I	GCGC	3 cut(s)	340, 714, 3223
HindIII	AAGCTT	3 cut(s)	1253, 1850, 2619
HpaII	CCGG	7 cut(s)	436, 562, 591, 625, 681, 971, 2388
HphI	GGTGA	3 cut(s)	471, 1055, 1751
Hpy166II	GTNNAC	4 cut(s)	697, 1705, 1712, 2599
Hpy8I	GTNNAC	4 cut(s)	697, 1705, 1712, 2599
Hpy99I	CGWCG	4 cut(s)	281, 737, 923, 1062
HpyAV	CCTTC	9 cut(s)	778, 791, 1693, 1780, 1784, 1990, 2215, 2515, 2983
HpyCH4III	ACNGT	9 cut(s)	126, 869, 1709, 1725, 1945, 2069, 2154, 2724, 2899
HpyCH4IV	ACGT	2 cut(s)	750, 1714
HpySE526I	ACGT	2 cut(s)	750, 1714
Hsp92I	GRCGYC	3 cut(s)	279, 412, 471
Hsp92II	CATG	8 cut(s)	316, 1832, 1924, 2098, 2860, 3150, 3193, 3259
HspAI	GCGC	3 cut(s)	340, 714, 3223
KflI	GGGWCCC	1 cut(s)	308
Kpn2I	TCCGGA	1 cut(s)	561
Kzo9I	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
LguI	GCTCTTC	1 cut(s)	2268
LweI	GCATC	4 cut(s)	1462, 1519, 1990, 2018
MaeI	CTAG	3 cut(s)	1049, 1331, 2082
MaeII	ACGT	2 cut(s)	750, 1714
MalI	GATC	8 cut(s)	27, 222, 1047, 1384, 1806, 2510, 2970, 3174
MbiI	CCGCTC	3 cut(s)	347, 361, 559
MboI	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
MfeI	CAATTG	3 cut(s)	579, 2004, 2660
MflI	RGATCY	1 cut(s)	2968
MhlI	GDGCHC	8 cut(s)	519, 672, 855, 904, 1296, 2152, 2506, 2924
MlyI	GAGTC	2 cut(s)	1084, 2183
MmeI	TCCRAC	1 cut(s)	741
Mph1103I	ATGCAT	1 cut(s)	990
MroI	TCCGGA	1 cut(s)	561
MroXI	GAANNNNTTC	1 cut(s)	2328
MslI	CAYNNNNRTG	2 cut(s)	1470, 3145
MspA1I	CMGCKG	2 cut(s)	665, 2771
MspCI	CTTAAG	2 cut(s)	1256, 2572
MspI	CCGG	7 cut(s)	436, 562, 591, 625, 681, 971, 2388
MunI	CAATTG	3 cut(s)	579, 2004, 2660
MvaI	CCWGG	8 cut(s)	897, 1160, 1491, 2306, 2420, 2609, 3239, 3272
MvnI	CGCG	3 cut(s)	1038, 1625, 3223
NciI	CCSGG	3 cut(s)	436, 971, 2388
NdeI	CATATG	1 cut(s)	990
NdeII	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
NlaIII	CATG	8 cut(s)	316, 1832, 1924, 2098, 2860, 3150, 3193, 3259
NlaIV	GGNNCC	6 cut(s)	309, 310, 676, 2289, 2606, 3207
NmeAIII	GCCGAG	4 cut(s)	554, 874, 2638, 3160
NmuCI	GTSAC	6 cut(s)	568, 877, 1178, 2221, 3054, 3116
NsiI	ATGCAT	1 cut(s)	990
PagI	TCATGA	1 cut(s)	1828
PciSI	GCTCTTC	1 cut(s)	2268
PcsI	WCGNNNNNNNCGW	1 cut(s)	732
PdmI	GAANNNNTTC	1 cut(s)	2328
PflFI	GACNNNGTC	1 cut(s)	281
PflMI	CCANNNNNTGG	1 cut(s)	3277
PfoI	TCCNGGA	3 cut(s)	895, 2304, 3270
PleI	GAGTC	2 cut(s)	1084, 2182
PpsI	GAGTC	2 cut(s)	1084, 2182
PpuMI	RGGWCCY	1 cut(s)	308
PshBI	ATTAAT	1 cut(s)	2979
Psp124BI	GAGCTC	3 cut(s)	519, 855, 904
Psp5II	RGGWCCY	1 cut(s)	308
Psp6I	CCWGG	8 cut(s)	895, 1158, 1489, 2304, 2418, 2607, 3237, 3270
PspFI	CCCAGC	5 cut(s)	336, 605, 755, 1188, 2962
PspGI	CCWGG	8 cut(s)	895, 1158, 1489, 2304, 2418, 2607, 3237, 3270
PspN4I	GGNNCC	6 cut(s)	309, 310, 676, 2289, 2606, 3207
PspPI	GGNCC	3 cut(s)	308, 423, 1499
PspPPI	RGGWCCY	1 cut(s)	308
PstNI	CAGNNNCTG	2 cut(s)	1075, 1391
PsuI	RGATCY	1 cut(s)	2968
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	1 cut(s)	2771
RsaI	GTAC	6 cut(s)	399, 528, 611, 866, 2170, 2598
RsaNI	GTAC	6 cut(s)	398, 527, 610, 865, 2169, 2597
RseI	CAYNNNNRTG	2 cut(s)	1470, 3145
SacI	GAGCTC	3 cut(s)	519, 855, 904
SapI	GCTCTTC	1 cut(s)	2268
Sau3AI	GATC	8 cut(s)	25, 220, 1045, 1382, 1804, 2508, 2968, 3172
Sau96I	GGNCC	3 cut(s)	308, 423, 1499
SchI	GAGTC	2 cut(s)	1084, 2183
SduI	GDGCHC	8 cut(s)	519, 672, 855, 904, 1296, 2152, 2506, 2924
SfaNI	GCATC	4 cut(s)	1462, 1519, 1990, 2018
SgrAI	CRCCGGYG	1 cut(s)	680
SinI	GGWCC	1 cut(s)	308
SmiMI	CAYNNNNRTG	2 cut(s)	1470, 3145
SmlI	CTYRAG	4 cut(s)	903, 1025, 1256, 2572
SmoI	CTYRAG	4 cut(s)	903, 1025, 1256, 2572
SpeI	ACTAGT	1 cut(s)	1330
SspI	AATATT	2 cut(s)	2809, 2977
SspMI	CTAG	3 cut(s)	1049, 1331, 2082
SstI	GAGCTC	3 cut(s)	519, 855, 904
StyI	CCWWGG	1 cut(s)	1127
TaaI	ACNGT	9 cut(s)	126, 869, 1709, 1725, 1945, 2069, 2154, 2724, 2899
TaiI	ACGT	2 cut(s)	753, 1717
TaqI	TCGA	6 cut(s)	540, 735, 795, 963, 1088, 3007
TaqII	GACCGA	1 cut(s)	1046
TatI	WGTACW	2 cut(s)	864, 2596
TscAI	CASTG	6 cut(s)	309, 526, 886, 1396, 1865, 2929
TseFI	GTSAC	6 cut(s)	568, 877, 1178, 2221, 3054, 3116
Tsp45I	GTSAC	6 cut(s)	568, 877, 1178, 2221, 3054, 3116
TspDTI	ATGAA	8 cut(s)	58, 329, 1101, 1817, 1845, 2706, 3135, 3206
TspGWI	ACGGA	7 cut(s)	186, 385, 1166, 1415, 1595, 2484, 2597
TspRI	CASTG	6 cut(s)	309, 526, 886, 1396, 1865, 2929
Tth111I	GACNNNGTC	1 cut(s)	281
Van91I	CCANNNNNTGG	1 cut(s)	3277
Vha464I	CTTAAG	2 cut(s)	1256, 2572
VpaK11BI	GGWCC	1 cut(s)	308
VspI	ATTAAT	1 cut(s)	2979
XapI	RAATTY	5 cut(s)	32, 62, 812, 949, 1008
XbaI	TCTAGA	1 cut(s)	1048
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1600, 2761
XmiI	GTMKAC	1 cut(s)	696
XmnI	GAANNNNTTC	1 cut(s)	2328
XspI	CTAG	3 cut(s)	1049, 1331, 2082
Zsp2I	ATGCAT	1 cut(s)	990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.