Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0014042

Physical Location & Seq

Genomic Coordinates Forward (+)

77271329 .. 77276926

Gene Structure 5598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G043970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGCACATGGAGATTGGTAGACGCATTTTCAGACAGAGGCTTGAGACTGGGGACCGTGAAGGTGATCTAGAGCAGCGTCGGGCATTTCAGAAGCTGATATATGTCTCAACACTTGTGTTTGGAGATGCTTCATCTTTCCTCTTACCTTGGAAGCGTGTTTTCAAGGTCACGGATTCCCAGGTGGAGATTGCTATCCGTGATAATGCACAGAGGTTGTATGCTTCCAAGCTAAAATCAGCTGGCAGAGATATTGATGCAGAGCCACTTGTTAGGCTAAGAGAAGCACAACTCATGTATCGGCTTTCTGATGAGAATGCTGCAGACTTGTTCAAGGAGCACACAAGAAAACTGGCCGAGGAAAATATTTCATCAGCACTCAATATTCTCAAGTCCAGAACAAGAACAGCGGGGGGTGTCACACGAGTTGTGGAAGAGCTTGATAAGGTTCTAGCACTCAATAGTTTGCTCATCTCACTAAAGAACCAGCCAGATGCTGTTCGCTTTGCACCTGGGGTTGGGCCAATTTCTTTACTTGGGGGTGATTATTATGGTGATAGAAAGATAGATGACTTGAAGCACCTTTATAAAGCATATGTCACGGATTCTTTATCAGGGGGTCGCTTGGAAGAGAATAAGCTTTCTGCATTGAATCAGCTTAAGAATATATTTGGGTTAGGCAACCGAGAGGCAGAAGCCATTGTGCTAGATGTTACTTCAAAGGTATACCGTAAACGTCTTTCACAGGCTGTTAGTGGGGGTGATTTGGAAGCAGCAGATAGCAAAGCAGCTTTCCTTCAAGGTATCTGTGAGGAGCTGCACTTCGATCCACAGAAGGCGAGTGGGATTCATGAAGAAATTTACCGGCAGAAGCTTCAGCTGTGTGTTGCTGATGGAGAGCTTGATGAGGAGGATGTTGCTGCCTTGTTAAGGCTGCGGGTCTTGCTATGTATACCAAGGGAAACTGTTGAAGCTGCCCATACAGAGATCTGTGGCAGTTTGTTTGAAAAGGTTGTGAAGGATGCAATTGCATCTGGTGTTGATGGATACGACGCTGATGTGAAATTAGCTGTCAGAAAGGCAGCCCATGGCTTGCGATTGACTAGGGAGGCAGCCATGTCTATTGCAAGCAAGGCAGTCAGAAGGATTTTTGTTAACTACGTAAAACGAGCACGGGCAGCCGGGAACCGTACTGAGGCTGCAAAAGAACTTAAAAAGCTGATAGCCTTCAACACATTGGTTGTGACTGAATTAGTGGCAGACATAAAAGGGGAATCATCTGATACATCGACAGATGAGCCAACAAAGGAGAAAGAAGTAAAAGAGGAAGAAGAAACAGTCCCCGAGGATGAGGAATGGGAATCTATTCAGACACTTAGAAAAATAAGACCTGACAAGGAACTTGCAGCGAAGTTGGGGAAGCCTGGTCAGACTGAGATAACTCTGAAAGATGACCTGCAAGAAAGAGAGAGGACCGACCTGTACAAAACATACTTGCTTTTTTGTATAACTGGAGAAGTGAAGAAGATTCCATTTGGTGCTCAGATCACTACAAAGAAGGATGATTCAGAGTATCTGCTACTAAATCAGCTTGGAGCAATATTGGGTTTGAGCACTACAGAGGTCGTGGAAGTACACAGGAGCCTGGCCGAGCAAGCTTTCAGGCAACAAGCAGAGGTGATTTTAGCTGATGGGCAATTGACAAAAGCCAGGGTAGAGCAACTTGATGAGTTGCAGAAGCAAGTCGGGTTGCCTCCACAATATGTTCAAAAGATAATAAAGAGTATAACAACTACAAAAATGGCGTCTGCCATTGAAACAGCTATTGGCCAGGGGAGGCTCAATATTAAGCAGATAAGAGAACTGAAACAATCAAGTGTTGATTTAGAAAGCATGATATCTGAGAGCTTGCGAGAGAACCTATTCAAAAAAACGGTTGATGAGATATTCTCATCAGGCACTGGAGAGTTTGATGAGGAGGAAGTCTATGAGAAAATCCCAGCGGATCTCAACATTAATGTCAAGAAGGCAAGAGGTGTAGTTCTGGAGCTTGCAAAGAGCAGATTATCTAATTCACTGATTCAAGCTGTGTCACTTTTGCGGCAGAGAAATCGTCAAGGAGTGGTTTCTTCTCTTAATGACATACTGGCTTGTGATAAAGCTGTGCCTGCCCAGCCACTTTCATGGGATGTTCCAGAGGAGCTGGCCGATCTGTTTGCCATATACCTTAAAAGTGACCCAGCACCTGAGAAACTGTCACGCTTGCAGTATCTGCTGGGCATTAATGATTCCATGGCAGCTTCCCTCGGGGAGATGGGAGACAGATTATCCCCTGCTGGTGCAGAGGAAAAGTTTGTATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0031090 GO:0031897 GO:0031967 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tic110

Protein Analysis

786

Amino Acids

87.57

Weight (kDa)

5.6

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tic110	PF16940	1 - 418	6.4e-216	Chloroplast envelope transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06950
fragaria_vesca	FvH4_3g40080
malus_domestica	MD03G1058800.v1.1 MD11G1060900.v1.1
prunus_persica	Prupe.6G045000_v2.0.a1
pyrus_communis	pycom03g04710 pycom11g05040
rosa_chinensis	RchiOBHm_Chr5g0072271
rosa_laevigata	RLG00000036290
rosa_multiflora	Rmu_sc0000714.1_g000010
rosa_roxburghii	Rroxscaffold_1G00009000
rosa_rugosa	Rorug05G0417400
rosa_samantha	Rh5AG473200 Rh5BG493500 Rh5CG517500 Rh5DG505400
rosa_wichuraiana	Rw5G043970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	585
Acc36I	ACCTGC	1 cut(s)	1461
AccI	GTMKAC	3 cut(s)	19, 723, 949
AciI	CCGC	4 cut(s)	407, 934, 2000, 2098
AclWI	GGATC	2 cut(s)	818, 2010
AcoI	YGGCCR	4 cut(s)	351, 1644, 1825, 2202
AcsI	RAATTY	1 cut(s)	855
AcuI	CTGAAG	1 cut(s)	857
AcyI	GRCGYC	1 cut(s)	1802
AfaI	GTAC	3 cut(s)	1189, 1481, 1632
AfiI	CCNNNNNNNGG	3 cut(s)	515, 927, 1192
AflII	CTTAAG	1 cut(s)	656
AjnI	CCWGG	6 cut(s)	177, 508, 1420, 1641, 1706, 1827
AjuI	GAANNNNNNNTTGG	2 cut(s)	1806, 1838
Alw21I	GWGCWC	4 cut(s)	339, 1171, 1540, 1613
Alw26I	GTCTC	3 cut(s)	38, 109, 2310
AlwI	GGATC	2 cut(s)	818, 2010
AlwNI	CAGNNNCTG	5 cut(s)	94, 494, 1958, 2243, 2269
Ama87I	CYCGRG	2 cut(s)	1340, 2303
AoxI	GGCC	5 cut(s)	351, 518, 1644, 1825, 2202
ApoI	RAATTY	1 cut(s)	855
ArsI	GACNNNNNNTTYG	2 cut(s)	1787, 1819
AseI	ATTAAT	2 cut(s)	2013, 2280
Asp700I	GAANNNNTTC	2 cut(s)	1362, 1919
AspS9I	GGNCC	3 cut(s)	52, 518, 1470
AsuC2I	CCSGG	1 cut(s)	1180
AsuHPI	GGTGA	5 cut(s)	74, 551, 563, 770, 1687
AvaI	CYCGRG	2 cut(s)	1340, 2303
AvaII	GGWCC	2 cut(s)	52, 1470
BaeI	ACNNNNGTAYC	2 cut(s)	278, 311
BalI	TGGCCA	1 cut(s)	1827
BauI	CACGAG	1 cut(s)	420
Bbv12I	GWGCWC	4 cut(s)	339, 1171, 1540, 1613
BccI	CCATC	4 cut(s)	884, 1034, 1682, 2305
BcgI	CGANNNNNNTGC	4 cut(s)	2090, 2124, 2195, 2229
BciT130I	CCWGG	6 cut(s)	179, 510, 1422, 1643, 1708, 1829
BciVI	GTATCC	1 cut(s)	1037
BcnI	CCSGG	1 cut(s)	1180
BcoDI	GTCTC	3 cut(s)	38, 109, 2310
BfaI	CTAG	4 cut(s)	68, 449, 704, 1101
BfmI	CTRYAG	2 cut(s)	318, 1614
BfrI	CTTAAG	1 cut(s)	656
BfuAI	ACCTGC	1 cut(s)	1461
BfuI	GTATCC	1 cut(s)	1037
BglII	AGATCT	1 cut(s)	984
Bme1390I	CCNGG	7 cut(s)	179, 510, 1180, 1422, 1643, 1708, 1829
Bme18I	GGWCC	2 cut(s)	52, 1470
BmeT110I	CYCGRG	2 cut(s)	1340, 2303
BmgT120I	GGNCC	3 cut(s)	52, 518, 1470
BmiI	GGNNCC	3 cut(s)	53, 1184, 1640
BmrFI	CCNGG	7 cut(s)	179, 510, 1180, 1422, 1643, 1708, 1829
BmrI	ACTGGG	1 cut(s)	57
BmsI	GCATC	5 cut(s)	115, 244, 481, 1009, 1037
BmuI	ACTGGG	1 cut(s)	57
BplI	GAGNNNNNCTC	2 cut(s)	1931, 1963
BpmI	CTGGAG	3 cut(s)	1530, 1980, 2063
BpuEI	CTTGAG	2 cut(s)	62, 371
BpuMI	CCSGG	1 cut(s)	1180
BsaAI	YACGTR	1 cut(s)	1159
BsaBI	GATNNNNATC	1 cut(s)	191
BsaHI	GRCGYC	1 cut(s)	1802
Bsc4I	CCNNNNNNNGG	3 cut(s)	515, 927, 1192
Bse118I	RCCGGY	1 cut(s)	861
Bse1I	ACTGG	5 cut(s)	52, 354, 1513, 1963, 2148
Bse8I	GATNNNNATC	1 cut(s)	191
BseBI	CCWGG	6 cut(s)	179, 510, 1422, 1643, 1708, 1829
BseGI	GGATG	5 cut(s)	916, 1024, 1351, 1564, 2191
BseJI	GATNNNNATC	1 cut(s)	191
BseLI	CCNNNNNNNGG	3 cut(s)	515, 927, 1192
BseMII	CTCAG	5 cut(s)	1182, 1422, 1553, 1890, 2235
BseNI	ACTGG	5 cut(s)	52, 354, 1513, 1963, 2148
BseRI	GAGGAG	4 cut(s)	824, 920, 1988, 2210
BseYI	CCCAGC	4 cut(s)	1996, 2169, 2236, 2272
BsgI	GTGCAG	2 cut(s)	800, 2358
BshFI	GGCC	5 cut(s)	353, 520, 1646, 1827, 2204
BsiHKAI	GWGCWC	4 cut(s)	339, 1171, 1540, 1613
BsiHKCI	CYCGRG	2 cut(s)	1340, 2303
BsiSI	CCGG	2 cut(s)	862, 1179
BslFI	GGGAC	2 cut(s)	65, 1322
BslI	CCNNNNNNNGG	3 cut(s)	515, 927, 1192
BsmAI	GTCTC	3 cut(s)	38, 109, 2310
BsmFI	GGGAC	2 cut(s)	65, 1322
BsmI	GAATGC	1 cut(s)	319
BsnI	GGCC	5 cut(s)	353, 520, 1646, 1827, 2204
BsoBI	CYCGRG	2 cut(s)	1340, 2303
Bsp1286I	GDGCHC	4 cut(s)	339, 1171, 1540, 1613
Bsp1407I	TGTACA	1 cut(s)	1479
Bsp143I	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
Bsp19I	CCATGG	2 cut(s)	1084, 2289
BspACI	CCGC	4 cut(s)	407, 934, 2000, 2098
BspANI	GGCC	5 cut(s)	353, 520, 1646, 1827, 2204
BspCNI	CTCAG	5 cut(s)	1183, 1423, 1552, 1891, 2236
BspHI	TCATGA	1 cut(s)	847
BspLI	GGNNCC	3 cut(s)	53, 1184, 1640
BspMAI	CTGCAG	1 cut(s)	322
BspMI	ACCTGC	1 cut(s)	1461
BspPI	GGATC	2 cut(s)	818, 2010
BspQI	GCTCTTC	1 cut(s)	426
BspTI	CTTAAG	1 cut(s)	656
BsrFI	RCCGGY	1 cut(s)	861
BsrGI	TGTACA	1 cut(s)	1479
BsrI	ACTGG	5 cut(s)	52, 354, 1513, 1963, 2148
BssAI	RCCGGY	1 cut(s)	861
BssMI	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
BssNAI	GTATAC	2 cut(s)	724, 950
BssNI	GRCGYC	1 cut(s)	1802
BssSI	CACGAG	1 cut(s)	420
BssT1I	CCWWGG	4 cut(s)	146, 953, 1084, 2289
Bst1107I	GTATAC	2 cut(s)	724, 950
Bst2BI	CACGAG	1 cut(s)	420
Bst2UI	CCWGG	6 cut(s)	179, 510, 1422, 1643, 1708, 1829
Bst4CI	ACNGT	7 cut(s)	56, 728, 964, 1187, 1336, 1933, 2253
Bst6I	CTCTTC	2 cut(s)	426, 621
BstACI	GRCGYC	1 cut(s)	1802
BstAFI	CTTAAG	1 cut(s)	656
BstAPI	GCANNNNNTGC	1 cut(s)	2269
BstAUI	TGTACA	1 cut(s)	1479
BstBAI	YACGTR	1 cut(s)	1159
BstC8I	GCNNGC	9 cut(s)	241, 1091, 1126, 1653, 1907, 2049, 2166, 2202, 2261
BstDEI	CTNAG	7 cut(s)	275, 1191, 1373, 1431, 1539, 1899, 2244
BstDSI	CCRYGG	2 cut(s)	1084, 2289
BstENI	CCTNNNNNAGG	1 cut(s)	925
BstF5I	GGATG	5 cut(s)	916, 1024, 1351, 1564, 2191
BstKTI	GATC	6 cut(s)	67, 826, 987, 1545, 2005, 2209
BstMAI	GTCTC	3 cut(s)	38, 109, 2310
BstMBI	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
BstMWI	GCNNNNNNNGC	7 cut(s)	940, 1130, 1175, 1652, 2165, 2170, 2269
BstNI	CCWGG	6 cut(s)	179, 510, 1422, 1643, 1708, 1829
BstSCI	CCNGG	7 cut(s)	177, 508, 1178, 1420, 1641, 1706, 1827
BstSFI	CTRYAG	2 cut(s)	318, 1614
BstSNI	TACGTA	1 cut(s)	1159
BstX2I	RGATCY	2 cut(s)	984, 2002
BstXI	CCANNNNNNTGG	1 cut(s)	2181
BstYI	RGATCY	2 cut(s)	984, 2002
BstZ17I	GTATAC	2 cut(s)	724, 950
BsuI	GTATCC	1 cut(s)	1037
BsuRI	GGCC	5 cut(s)	353, 520, 1646, 1827, 2204
BtgI	CCRYGG	2 cut(s)	1084, 2289
BtsCI	GGATG	5 cut(s)	916, 1024, 1351, 1564, 2191
BtsIMutI	CAGTG	2 cut(s)	1956, 2072
BveI	ACCTGC	1 cut(s)	1461
Cac8I	GCNNGC	9 cut(s)	241, 1091, 1126, 1653, 1907, 2049, 2166, 2202, 2261
CaiI	CAGNNNCTG	5 cut(s)	94, 494, 1958, 2243, 2269
CciI	TCATGA	1 cut(s)	847
Cfr10I	RCCGGY	1 cut(s)	861
Cfr13I	GGNCC	3 cut(s)	52, 518, 1470
CseI	GACGC	4 cut(s)	30, 65, 1058, 1791
Csp6I	GTAC	3 cut(s)	1188, 1480, 1631
CviAII	CATG	8 cut(s)	7, 292, 848, 1085, 1114, 1891, 2181, 2290
CviQI	GTAC	3 cut(s)	1188, 1480, 1631
DdeI	CTNAG	7 cut(s)	275, 1191, 1373, 1431, 1539, 1899, 2244
DpnI	GATC	6 cut(s)	66, 825, 986, 1544, 2004, 2208
DpnII	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
EaeI	YGGCCR	4 cut(s)	351, 1644, 1825, 2202
Eam1104I	CTCTTC	2 cut(s)	426, 621
EarI	CTCTTC	2 cut(s)	426, 621
Eco105I	TACGTA	1 cut(s)	1159
Eco130I	CCWWGG	4 cut(s)	146, 953, 1084, 2289
Eco32I	GATATC	1 cut(s)	1896
Eco47I	GGWCC	2 cut(s)	52, 1470
Eco57I	CTGAAG	1 cut(s)	857
Eco88I	CYCGRG	2 cut(s)	1340, 2303
EcoNI	CCTNNNNNAGG	1 cut(s)	925
EcoRII	CCWGG	6 cut(s)	177, 508, 1420, 1641, 1706, 1827
EcoRV	GATATC	1 cut(s)	1896
EcoT14I	CCWWGG	4 cut(s)	146, 953, 1084, 2289
ErhI	CCWWGG	4 cut(s)	146, 953, 1084, 2289
FaeI	CATG	8 cut(s)	10, 295, 851, 1088, 1117, 1894, 2184, 2293
FaqI	GGGAC	2 cut(s)	65, 1322
FatI	CATG	8 cut(s)	6, 291, 847, 1084, 1113, 1890, 2180, 2289
FauI	CCCGC	2 cut(s)	400, 927
FauNDI	CATATG	1 cut(s)	592
FblI	GTMKAC	3 cut(s)	19, 723, 949
FokI	GGATG	5 cut(s)	923, 1031, 1358, 1571, 2198
FspBI	CTAG	4 cut(s)	68, 449, 704, 1101
GsaI	CCCAGC	4 cut(s)	2000, 2173, 2240, 2276
GsuI	CTGGAG	3 cut(s)	1530, 1980, 2063
HaeIII	GGCC	5 cut(s)	353, 520, 1646, 1827, 2204
HapII	CCGG	2 cut(s)	862, 1179
HgaI	GACGC	4 cut(s)	30, 65, 1058, 1791
Hin1I	GRCGYC	1 cut(s)	1802
Hin1II	CATG	8 cut(s)	10, 295, 851, 1088, 1117, 1894, 2184, 2293
HincII	GTYRAC	1 cut(s)	1153
HindII	GTYRAC	1 cut(s)	1153
HindIII	AAGCTT	3 cut(s)	635, 869, 1653
HpaI	GTTAAC	1 cut(s)	1153
HpaII	CCGG	2 cut(s)	862, 1179
HphI	GGTGA	5 cut(s)	74, 551, 563, 770, 1687
Hpy166II	GTNNAC	6 cut(s)	20, 724, 731, 950, 1153, 1633
Hpy188III	TCNNGA	6 cut(s)	68, 393, 848, 2020, 2042, 2192
Hpy8I	GTNNAC	6 cut(s)	20, 724, 731, 950, 1153, 1633
Hpy99I	CGWCG	2 cut(s)	81, 1052
HpyAV	CCTTC	8 cut(s)	53, 803, 826, 1009, 1134, 1234, 1549, 2017
HpyCH4III	ACNGT	7 cut(s)	56, 728, 964, 1187, 1336, 1933, 2253
HpyCH4IV	ACGT	2 cut(s)	733, 1158
HpyF10VI	GCNNNNNNNGC	7 cut(s)	940, 1130, 1175, 1652, 2165, 2170, 2269
HpyF3I	CTNAG	7 cut(s)	275, 1191, 1373, 1431, 1539, 1899, 2244
HpySE526I	ACGT	2 cut(s)	733, 1158
Hsp92I	GRCGYC	1 cut(s)	1802
Hsp92II	CATG	8 cut(s)	10, 295, 851, 1088, 1117, 1894, 2184, 2293
KspAI	GTTAAC	1 cut(s)	1153
Kzo9I	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
LguI	GCTCTTC	1 cut(s)	426
LmnI	GCTCC	6 cut(s)	334, 811, 1592, 1638, 2044, 2197
LweI	GCATC	5 cut(s)	115, 244, 481, 1009, 1037
MaeI	CTAG	4 cut(s)	68, 449, 704, 1101
MaeII	ACGT	2 cut(s)	733, 1158
MaeIII	GTNAC	8 cut(s)	166, 415, 595, 709, 1240, 2088, 2231, 2253
MalI	GATC	6 cut(s)	66, 825, 986, 1544, 2004, 2208
MboI	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
MboII	GAAGA	8 cut(s)	443, 638, 863, 1337, 1340, 1531, 1534, 2118
MfeI	CAATTG	2 cut(s)	1023, 1694
MflI	RGATCY	2 cut(s)	984, 2002
MhlI	GDGCHC	4 cut(s)	339, 1171, 1540, 1613
MlsI	TGGCCA	1 cut(s)	1827
MluCI	AATT	7 cut(s)	522, 855, 1023, 1061, 1247, 1694, 2068
MluNI	TGGCCA	1 cut(s)	1827
Mox20I	TGGCCA	1 cut(s)	1827
MroXI	GAANNNNTTC	2 cut(s)	1362, 1919
MscI	TGGCCA	1 cut(s)	1827
MseI	TTAA	9 cut(s)	657, 926, 1152, 1209, 1845, 2013, 2133, 2226, 2280
MslI	CAYNNNNRTG	1 cut(s)	2179
Msp20I	TGGCCA	1 cut(s)	1827
MspA1I	CMGCKG	4 cut(s)	239, 407, 877, 2000
MspCI	CTTAAG	1 cut(s)	656
MspI	CCGG	2 cut(s)	862, 1179
MspR9I	CCNGG	7 cut(s)	179, 510, 1180, 1422, 1643, 1708, 1829
MunI	CAATTG	2 cut(s)	1023, 1694
Mva1269I	GAATGC	1 cut(s)	319
MvaI	CCWGG	6 cut(s)	179, 510, 1422, 1643, 1708, 1829
MwoI	GCNNNNNNNGC	7 cut(s)	940, 1130, 1175, 1652, 2165, 2170, 2269
NciI	CCSGG	1 cut(s)	1180
NcoI	CCATGG	2 cut(s)	1084, 2289
NdeI	CATATG	1 cut(s)	592
NdeII	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
NlaIII	CATG	8 cut(s)	10, 295, 851, 1088, 1117, 1894, 2184, 2293
NlaIV	GGNNCC	3 cut(s)	53, 1184, 1640
NmeAIII	GCCGAG	2 cut(s)	379, 1672
NmuCI	GTSAC	7 cut(s)	166, 415, 595, 1240, 2088, 2231, 2253
PagI	TCATGA	1 cut(s)	847
PciSI	GCTCTTC	1 cut(s)	426
PctI	GAATGC	1 cut(s)	319
PdmI	GAANNNNTTC	2 cut(s)	1362, 1919
Ppu21I	YACGTR	1 cut(s)	1159
PshBI	ATTAAT	2 cut(s)	2013, 2280
PsiI	TTATAA	1 cut(s)	585
Psp6I	CCWGG	6 cut(s)	177, 508, 1420, 1641, 1706, 1827
PspFI	CCCAGC	4 cut(s)	1996, 2169, 2236, 2272
PspGI	CCWGG	6 cut(s)	177, 508, 1420, 1641, 1706, 1827
PspN4I	GGNNCC	3 cut(s)	53, 1184, 1640
PspPI	GGNCC	3 cut(s)	52, 518, 1470
PstI	CTGCAG	1 cut(s)	322
PstNI	CAGNNNCTG	5 cut(s)	94, 494, 1958, 2243, 2269
PsuI	RGATCY	2 cut(s)	984, 2002
PvuII	CAGCTG	2 cut(s)	239, 877
RsaI	GTAC	3 cut(s)	1189, 1481, 1632
RsaNI	GTAC	3 cut(s)	1188, 1480, 1631
RseI	CAYNNNNRTG	1 cut(s)	2179
SapI	GCTCTTC	1 cut(s)	426
SaqAI	TTAA	9 cut(s)	657, 926, 1152, 1209, 1845, 2013, 2133, 2226, 2280
Sau3AI	GATC	6 cut(s)	64, 823, 984, 1542, 2002, 2206
Sau96I	GGNCC	3 cut(s)	52, 518, 1470
ScrFI	CCNGG	7 cut(s)	179, 510, 1180, 1422, 1643, 1708, 1829
SduI	GDGCHC	4 cut(s)	339, 1171, 1540, 1613
SfaNI	GCATC	5 cut(s)	115, 244, 481, 1009, 1037
SfcI	CTRYAG	2 cut(s)	318, 1614
SinI	GGWCC	2 cut(s)	52, 1470
SmiMI	CAYNNNNRTG	1 cut(s)	2179
SmlI	CTYRAG	3 cut(s)	41, 386, 656
SmoI	CTYRAG	3 cut(s)	41, 386, 656
SnaBI	TACGTA	1 cut(s)	1159
Sse9I	AATT	7 cut(s)	522, 855, 1023, 1061, 1247, 1694, 2068
SsiI	CCGC	4 cut(s)	407, 934, 2000, 2098
SspI	AATATT	4 cut(s)	364, 382, 1599, 1843
SspMI	CTAG	4 cut(s)	68, 449, 704, 1101
StyD4I	CCNGG	7 cut(s)	177, 508, 1178, 1420, 1641, 1706, 1827
StyI	CCWWGG	4 cut(s)	146, 953, 1084, 2289
TaaI	ACNGT	7 cut(s)	56, 728, 964, 1187, 1336, 1933, 2253
TaiI	ACGT	2 cut(s)	736, 1161
TaqI	TCGA	2 cut(s)	822, 1286
TaqII	GACCGA	1 cut(s)	1487
TasI	AATT	7 cut(s)	522, 855, 1023, 1061, 1247, 1694, 2068
TatI	WGTACW	2 cut(s)	1479, 1630
TauI	GCSGC	1 cut(s)	2101
Tru1I	TTAA	9 cut(s)	657, 926, 1152, 1209, 1845, 2013, 2133, 2226, 2280
Tru9I	TTAA	9 cut(s)	657, 926, 1152, 1209, 1845, 2013, 2133, 2226, 2280
TscAI	CASTG	2 cut(s)	1963, 2079
TseFI	GTSAC	7 cut(s)	166, 415, 595, 1240, 2088, 2231, 2253
Tsp45I	GTSAC	7 cut(s)	166, 415, 595, 1240, 2088, 2231, 2253
TspDTI	ATGAA	5 cut(s)	120, 357, 836, 864, 2169
TspGWI	ACGGA	3 cut(s)	185, 185, 614
TspRI	CASTG	2 cut(s)	1963, 2079
Vha464I	CTTAAG	1 cut(s)	656
VpaK11BI	GGWCC	2 cut(s)	52, 1470
VspI	ATTAAT	2 cut(s)	2013, 2280
XagI	CCTNNNNNAGG	1 cut(s)	925
XapI	RAATTY	1 cut(s)	855
XbaI	TCTAGA	1 cut(s)	67
XmiI	GTMKAC	3 cut(s)	19, 723, 949
XmnI	GAANNNNTTC	2 cut(s)	1362, 1919
XspI	CTAG	4 cut(s)	68, 449, 704, 1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.