Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0007496

Physical Location & Seq

Genomic Coordinates Reverse (-)

7844046 .. 7847115

Gene Structure 3070 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g09340.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGAGTACATTGCGCTCTACATGTGAAATTGTTGAATCAAGAGAAGAGCTCCACTCGGAGTCCAAAATGGACGAGAAAGGTGCAAAACACAGCATGCTAAAATTAGGAAATAAATATTCAATCGAGGATGATATTAATCAGCTTTTTCAGGCAATTGATGGTAGAAAGTCTGCTAGGATATCAGGTTTGTCGCATGAGGCTAGCAAAGACGCTTTGAGGAAGAGTGCTATGAAAAGGCCAATGAGAGTTGGTTCATCAAATACATCAGGTATCGGAATTTCAGAGCCTGTGAGTTTGAAGCAAGCACTTAGAGGATTGTGCATCACTCAGGCATCAGAGTTGGCTGCCATGAAGCGGCTACCGAGGCTAGGTCGTTCATCAGGAGTTTCAGAAGCAGGAACTATCAAAAGGTTGTATGGCACAGTGGTAGCCGAGGCCAATGGGCCTGGCATACCTATGACTGAAGGTAAGGGGAATTATGTAGAGGTGTCCCTTGTGCCTGAAACATCCAAAAATTCTGAAAACAATCCTGGATCCATGCAATCAGAGACACAGGTTGATACTGCCAGAACTTTGGGAGCTGGACTGATGCCCGATGCTAGTAAGACCAGATTACCACCGCATGATCAAATTACTCCTTTTTCATCAGCAGTTAAAAGTGATATATCGAAGGGAGAAGATAGAGAACCGGAATCAGCAGAATCTTCATTCCATTTTCATCATGGTAAGAAAGTCATGCAGAGGGGTGCGGTTGCTTCTATCTCCACTGATGTTCCAATTAATTCTTCAAATTCAAACAAGGGGCTGCACTCTGCTGCTTCTCCATCTGGCTCTAGCACTGGTAGTAAGGTAGGCAAATCATCTGGCAGTAGTTCACATCTAATCAAGCCGGTTCTCAGGAGCAAAAACGTGGTTAAGAAAACTGTCAAGCAGGATTCAAGTTCTGGTTCTAGTAGTTCCAAATCAGATAACCGACAAGTTGATAGTGATTCGTGCTCTAGTACTAGCAAGTTAAAGGACCAGACACACAACTGTACTCCAAAGCATGAAGGGAAAGGAAATGAGAAATTATCTCTGGCATCAAGCAGTACAAGTCTTAGCAAAGAATTGAATTCAGGTATTGTTAACAGAGGTACAAGCACACTGGATTTCGCTTCGAATTACAGTAGTAGGATTAACTCTGCAGTGACAAAAGTTGATGAGAGGTCAAGATCAAAGGAAAACGGGGATTTCTCACAAAGCTCAAAAAGTAGCATTGGTGACGGTAGCAGCACTACATGCACTAGTGAGGAGAGCAGTCTAAGTGGGTCTGGTCGTAGCGGCAAGAGGCCACACATGTCAAGAGACTTGAGATGGGAAGCCATCCACCACGTCCAGAAGCAGCATGGAAGCTTAGGTTTGAAGCACTTTAAGTTGCTTAGGAGAATCGGTTCTGGGGACATTGGGACTGTTTATCTTGCTGAGCTAGCTGGAACAAATTGTGTATTTGCTTTGAAAGTGATGGACAACGAGTTTTTGGCTACCAGGAAGAAAATGATCAGGGCCCAAACAGAAAGAGAGATACTGGAAATGCTGGATCATCCATTTCTTCCCACACTATATTCCCATTGTGTGTCAGATAACCTCTCATGTTTGGTTATGGAGTATTGTCCGGGTGGGGATCTGCACGTGCTGCGGCAAAAGCAACCTGGCAGGAGTTTCTGTGAACAAGCAGCCAGGTTTTATGTTGCTGAAGTCCTCCTTGCCTTGGAGTATTTACACATGCTAGGAGTTGTGTATCGAGACTTGAAACCTGAAAATATTCTGGTCCGAGAAGACGGCCACATCATGCTCACAGATTTTGATTTGTCACTTAGATGTGCTGTCAATCCAACGCTGCTTAAATCATCGTCTCCTGTTTTGGAGAGCACAGGAAAAATGTCAAGCCCATGCATAGAATCTAGCTGCATTGATCCTTTTTGCCTTCAACCATCCTGGCAAGTTCCATGCTTCACTCCCAGACTTTTATCCGCCGCTGCAAAATCTCGAAAAGTGAAATCCGAGCTTGCTGCCCAGGTCAGCCCATTGCCACAGCTTGTAGTGGAGCCTACTAGTGCCCGGTCCAACTCATTTGTTGGAACCCATGAATACCTTGCCCCGGAGATCATTAAAGGAGACGGCCATGGGAATGCTGTTGATTGGTGGACATATGGAATCTTTCTGTTTGAGCTGTTATATGGTAAGACACCCTTCAAGGGGTCAGGAAATGAGGACACATTATCCAATGTTGTGTCGAAAAGTCTCAAGTTCCCAAATACACCTATAGTGAGTTTTTATGCAAGAGATCTGATCAGAGGCCTCTTAATAAAGGACCCTGAAAATCGTCTAGGATCAGTGAAAGGGGCTGCAGAAATCAAGCAGCATCCTTTCTTTGAAGGCCTCAATTGGGCATTGATTCGGTGTGCAGTACCGCCAGAGCTTCCCAAGTGGGGTGATATTGGAATTGGTACACCATCTGCTTCACAGAAACAGGAGAGCACGGGCTGCAAGGAGTTGGAGGGTATAGAAGAGCATATAGACTTTGACCTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

858

Amino Acids

92.97

Weight (kDa)

8.68

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007496)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g24340 FvH4_3g24340 FvH4_3g24340
malus_domestica	MD00G1119900.v1.1 MD11G1159800.v1.1
prunus_persica	Prupe.6G122800_v2.0.a1 Prupe.6G122800_v2.0.a1 Prupe.6G122800_v2.0.a1 Prupe.6G122800_v2.0.a1
pyrus_communis	pycom03g09340 pycom11g13040
rosa_chinensis	RchiOBHm_Chr5g0043841
rosa_laevigata	RLG00000034218
rosa_multiflora	Rmu_sc0004170.1_g000003 Rmu_sc0008441.1_g000017 Rmu_sc0020133.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037210
rosa_rugosa	Rorug05G0208600 Rorug05G0208700 Rorug05G0208800
rosa_samantha	Rh5AG292700 Rh5BG300800 Rh5CG328400 Rh5DG309700
rosa_wichuraiana	Rw5G027130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	8 cut(s)	355, 620, 749, 1320, 1675, 2010, 2013, 2450
AclWI	GGATC	6 cut(s)	528, 541, 1584, 1668, 1946, 2377
AcoI	YGGCCR	2 cut(s)	1819, 2158
AcsI	RAATTY	4 cut(s)	276, 514, 790, 1111
AcuI	CTGAAG	2 cut(s)	483, 1752
AcvI	CACGTG	1 cut(s)	1669
AfaI	GTAC	7 cut(s)	7, 1003, 1036, 1090, 1135, 2448, 2488
AfiI	CCNNNNNNNGG	8 cut(s)	354, 368, 1747, 2137, 2234, 2235, 2425, 2468
AflIII	ACRYGT	2 cut(s)	20, 1335
AhlI	ACTAGT	2 cut(s)	1283, 2090
AjiI	CACGTC	1 cut(s)	1372
AjnI	CCWGG	7 cut(s)	445, 529, 1523, 1687, 1715, 1973, 2052
AjuI	GAANNNNNNNTTGG	2 cut(s)	769, 801
AloI	GAACNNNNNNTCC	2 cut(s)	1414, 1446
Alw21I	GWGCWC	4 cut(s)	51, 998, 1910, 2519
Alw26I	GTCTC	6 cut(s)	542, 1338, 1776, 1896, 2148, 2285
AlwI	GGATC	6 cut(s)	528, 541, 1584, 1668, 1946, 2377
AlwNI	CAGNNNCTG	1 cut(s)	287
AoxI	GGCC	9 cut(s)	236, 435, 443, 1328, 1542, 1819, 2158, 2335, 2416
ApaI	GGGCCC	1 cut(s)	1546
ApoI	RAATTY	4 cut(s)	276, 514, 790, 1111
AseI	ATTAAT	2 cut(s)	135, 780
Asp700I	GAANNNNTTC	2 cut(s)	1429, 1800
AspLEI	GCGC	1 cut(s)	15
AspS9I	GGNCC	7 cut(s)	443, 1018, 1542, 1543, 1807, 2100, 2350
AsuC2I	CCSGG	3 cut(s)	1653, 2098, 2138
AsuHPI	GGTGA	2 cut(s)	1271, 2483
AsuII	TTCGAA	1 cut(s)	1157
AsuNHI	GCTAGC	2 cut(s)	200, 1465
AvaII	GGWCC	4 cut(s)	1018, 1807, 2100, 2350
BaeGI	GKGCMC	2 cut(s)	1546, 2098
BamHI	GGATCC	1 cut(s)	533
BanII	GRGCYC	2 cut(s)	51, 1546
BbrPI	CACGTG	1 cut(s)	1669
BbsI	GAAGAC	1 cut(s)	1821
Bbv12I	GWGCWC	4 cut(s)	51, 998, 1910, 2519
BccI	CCATC	7 cut(s)	152, 832, 1347, 1370, 1495, 1978, 2500
BceAI	ACGGC	2 cut(s)	1834, 2173
BcgI	CGANNNNNNTGC	4 cut(s)	62, 96, 2030, 2064
BciT130I	CCWGG	7 cut(s)	447, 531, 1525, 1689, 1717, 1975, 2054
BclI	TGATCA	3 cut(s)	625, 1536, 2328
BcnI	CCSGG	3 cut(s)	1653, 2098, 2138
BcoDI	GTCTC	6 cut(s)	542, 1338, 1776, 1896, 2148, 2285
BcuI	ACTAGT	2 cut(s)	1283, 2090
BfmI	CTRYAG	3 cut(s)	1182, 2301, 2385
BglII	AGATCT	1 cut(s)	2323
BlpI	GCTNAGC	1 cut(s)	1461
BmcAI	AGTACT	1 cut(s)	1003
Bme18I	GGWCC	4 cut(s)	1018, 1807, 2100, 2350
BmgBI	CACGTC	1 cut(s)	1372
BmgT120I	GGNCC	7 cut(s)	443, 1018, 1542, 1543, 1807, 2100, 2350
BmiI	GGNNCC	5 cut(s)	535, 1544, 2085, 2119, 2352
BmsI	GCATC	6 cut(s)	330, 341, 579, 586, 1088, 2410
BmtI	GCTAGC	2 cut(s)	204, 1469
BpiI	GAAGAC	1 cut(s)	1821
BplI	GAGNNNNNCTC	4 cut(s)	33, 65, 38, 70
Bpu10I	CCTNAGC	2 cut(s)	1393, 1418
Bpu1102I	GCTNAGC	1 cut(s)	1461
Bpu14I	TTCGAA	1 cut(s)	1157
BpuEI	CTTGAG	2 cut(s)	1369, 2267
BpuMI	CCSGG	3 cut(s)	1653, 2098, 2138
BsaAI	YACGTR	1 cut(s)	1669
BsaBI	GATNNNNATC	1 cut(s)	135
BsaJI	CCNNGG	6 cut(s)	362, 432, 1746, 2052, 2136, 2161
BsaWI	WCCGGW	1 cut(s)	688
BsaXI	ACNNNNNCTCC	4 cut(s)	1414, 1444, 1687, 1717
Bsc4I	CCNNNNNNNGG	8 cut(s)	354, 368, 1747, 2137, 2234, 2235, 2425, 2468
Bse118I	RCCGGY	1 cut(s)	889
Bse1I	ACTGG	3 cut(s)	844, 1149, 1569
Bse3DI	GCAATG	2 cut(s)	8, 2063
Bse8I	GATNNNNATC	1 cut(s)	135
BseBI	CCWGG	7 cut(s)	447, 531, 1525, 1689, 1717, 1975, 2054
BseDI	CCNNGG	6 cut(s)	362, 432, 1746, 2052, 2136, 2161
BseGI	GGATG	6 cut(s)	133, 506, 1362, 1579, 1970, 2401
BseJI	GATNNNNATC	1 cut(s)	135
BseLI	CCNNNNNNNGG	8 cut(s)	354, 368, 1747, 2137, 2234, 2235, 2425, 2468
BseMI	GCAATG	2 cut(s)	8, 2063
BseMII	CTCAG	3 cut(s)	341, 910, 1452
BseNI	ACTGG	3 cut(s)	844, 1149, 1569
BseRI	GAGGAG	1 cut(s)	1304
BseSI	GKGCMC	2 cut(s)	1546, 2098
BsgI	GTGCAG	3 cut(s)	791, 1649, 2463
BshFI	GGCC	9 cut(s)	238, 437, 445, 1330, 1544, 1821, 2160, 2337, 2418
BsiHKAI	GWGCWC	4 cut(s)	51, 998, 1910, 2519
BsiSI	CCGG	5 cut(s)	689, 890, 1652, 2098, 2138
BslFI	GGGAC	3 cut(s)	475, 1451, 1459
BslI	CCNNNNNNNGG	8 cut(s)	354, 368, 1747, 2137, 2234, 2235, 2425, 2468
BsmAI	GTCTC	6 cut(s)	542, 1338, 1776, 1896, 2148, 2285
BsmBI	CGTCTC	2 cut(s)	1896, 2148
BsmFI	GGGAC	3 cut(s)	475, 1451, 1459
BsmI	GAATGC	1 cut(s)	2173
BsnI	GGCC	9 cut(s)	238, 437, 445, 1330, 1544, 1821, 2160, 2337, 2418
Bsp119I	TTCGAA	1 cut(s)	1157
Bsp120I	GGGCCC	1 cut(s)	1542
Bsp1286I	GDGCHC	6 cut(s)	51, 998, 1546, 1910, 2098, 2519
Bsp1720I	GCTNAGC	1 cut(s)	1461
Bsp19I	CCATGG	1 cut(s)	2161
BspACI	CCGC	8 cut(s)	355, 620, 749, 1320, 1675, 2010, 2013, 2450
BspANI	GGCC	9 cut(s)	238, 437, 445, 1330, 1544, 1821, 2160, 2337, 2418
BspCNI	CTCAG	3 cut(s)	340, 909, 1453
BspLI	GGNNCC	5 cut(s)	535, 1544, 2085, 2119, 2352
BspMAI	CTGCAG	2 cut(s)	1186, 2389
BspOI	GCTAGC	2 cut(s)	204, 1469
BspPI	GGATC	6 cut(s)	528, 541, 1584, 1668, 1946, 2377
BspQI	GCTCTTC	2 cut(s)	39, 2541
BspT104I	TTCGAA	1 cut(s)	1157
BsrDI	GCAATG	2 cut(s)	8, 2063
BsrFI	RCCGGY	1 cut(s)	889
BsrI	ACTGG	3 cut(s)	844, 1149, 1569
BssAI	RCCGGY	1 cut(s)	889
BssECI	CCNNGG	6 cut(s)	362, 432, 1746, 2052, 2136, 2161
BssT1I	CCWWGG	2 cut(s)	1746, 2161
Bst2UI	CCWGG	7 cut(s)	447, 531, 1525, 1689, 1717, 1975, 2054
Bst4CI	ACNGT	6 cut(s)	424, 925, 1034, 1166, 1265, 1450
Bst6I	CTCTTC	3 cut(s)	39, 215, 2541
BstAPI	GCANNNNNTGC	3 cut(s)	1278, 1672, 2523
BstBAI	YACGTR	1 cut(s)	1669
BstBI	TTCGAA	1 cut(s)	1157
BstC8I	GCNNGC	5 cut(s)	95, 202, 303, 1467, 2046
BstDEI	CTNAG	9 cut(s)	308, 327, 896, 1097, 1301, 1393, 1418, 1461, 1853
BstDSI	CCRYGG	1 cut(s)	2161
BstF5I	GGATG	6 cut(s)	133, 506, 1362, 1579, 1970, 2401
BstHHI	GCGC	1 cut(s)	15
BstMAI	GTCTC	6 cut(s)	542, 1338, 1776, 1896, 2148, 2285
BstMWI	GCNNNNNNNGC	6 cut(s)	364, 1278, 1466, 1672, 1681, 2523
BstNI	CCWGG	7 cut(s)	447, 531, 1525, 1689, 1717, 1975, 2054
BstNSI	RCATGY	5 cut(s)	24, 97, 1281, 1339, 1765
BstSFI	CTRYAG	3 cut(s)	1182, 2301, 2385
BstSLI	GKGCMC	2 cut(s)	1546, 2098
BstV2I	GAAGAC	1 cut(s)	1821
BstX2I	RGATCY	3 cut(s)	533, 1660, 2323
BstXI	CCANNNNNNTGG	1 cut(s)	574
BstYI	RGATCY	3 cut(s)	533, 1660, 2323
BsuRI	GGCC	9 cut(s)	238, 437, 445, 1330, 1544, 1821, 2160, 2337, 2418
BtgI	CCRYGG	1 cut(s)	2161
BtrI	CACGTC	1 cut(s)	1372
BtsCI	GGATG	6 cut(s)	133, 506, 1362, 1579, 1970, 2401
BtsI	GCAGTG	1 cut(s)	1191
BtsIMutI	CAGTG	6 cut(s)	429, 765, 837, 1142, 1191, 2379
Cac8I	GCNNGC	5 cut(s)	95, 202, 303, 1467, 2046
CaiI	CAGNNNCTG	1 cut(s)	287
CfoI	GCGC	1 cut(s)	15
Cfr10I	RCCGGY	1 cut(s)	889
Cfr13I	GGNCC	7 cut(s)	443, 1018, 1542, 1543, 1807, 2100, 2350
CseI	GACGC	1 cut(s)	218
Csp6I	GTAC	7 cut(s)	6, 1002, 1035, 1089, 1134, 2447, 2487
CviQI	GTAC	7 cut(s)	6, 1002, 1035, 1089, 1134, 2447, 2487
DdeI	CTNAG	9 cut(s)	308, 327, 896, 1097, 1301, 1393, 1418, 1461, 1853
EaeI	YGGCCR	2 cut(s)	1819, 2158
Eam1104I	CTCTTC	3 cut(s)	39, 215, 2541
EarI	CTCTTC	3 cut(s)	39, 215, 2541
EciI	GGCGGA	1 cut(s)	1999
Ecl136II	GAGCTC	1 cut(s)	49
Eco130I	CCWWGG	2 cut(s)	1746, 2161
Eco147I	AGGCCT	2 cut(s)	2337, 2418
Eco24I	GRGCYC	2 cut(s)	51, 1546
Eco32I	GATATC	1 cut(s)	180
Eco47I	GGWCC	4 cut(s)	1018, 1807, 2100, 2350
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	2 cut(s)	483, 1752
Eco72I	CACGTG	1 cut(s)	1669
EcoICRI	GAGCTC	1 cut(s)	49
EcoO109I	RGGNCCY	2 cut(s)	1542, 2350
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	7 cut(s)	445, 529, 1523, 1687, 1715, 1973, 2052
EcoRV	GATATC	1 cut(s)	180
EcoT14I	CCWWGG	2 cut(s)	1746, 2161
EcoT22I	ATGCAT	1 cut(s)	1934
EcoT38I	GRGCYC	2 cut(s)	51, 1546
ErhI	CCWWGG	2 cut(s)	1746, 2161
Esp3I	CGTCTC	2 cut(s)	1896, 2148
FalI	AAGNNNNNCTT	4 cut(s)	1725, 1757, 2213, 2245
FaqI	GGGAC	3 cut(s)	475, 1451, 1459
FauNDI	CATATG	1 cut(s)	2188
FbaI	TGATCA	3 cut(s)	625, 1536, 2328
FokI	GGATG	6 cut(s)	140, 493, 1349, 1566, 1957, 2388
FriOI	GRGCYC	2 cut(s)	51, 1546
GlaI	GCGC	1 cut(s)	14
HaeIII	GGCC	9 cut(s)	238, 437, 445, 1330, 1544, 1821, 2160, 2337, 2418
HapII	CCGG	5 cut(s)	689, 890, 1652, 2098, 2138
HgaI	GACGC	1 cut(s)	218
HhaI	GCGC	1 cut(s)	15
Hin6I	GCGC	1 cut(s)	13
HinP1I	GCGC	1 cut(s)	13
HincII	GTYRAC	1 cut(s)	1126
HindII	GTYRAC	1 cut(s)	1126
HindIII	AAGCTT	1 cut(s)	1390
HpaI	GTTAAC	1 cut(s)	1126
HpaII	CCGG	5 cut(s)	689, 890, 1652, 2098, 2138
HphI	GGTGA	2 cut(s)	1271, 2483
Hpy166II	GTNNAC	5 cut(s)	875, 1126, 1706, 2184, 2489
Hpy188III	TCNNGA	9 cut(s)	39, 381, 898, 1209, 1341, 1375, 1781, 2025, 2241
Hpy8I	GTNNAC	5 cut(s)	875, 1126, 1706, 2184, 2489
HpyAV	CCTTC	6 cut(s)	458, 664, 1043, 1973, 2239, 2408
HpyCH4III	ACNGT	6 cut(s)	424, 925, 1034, 1166, 1265, 1450
HpyCH4IV	ACGT	3 cut(s)	909, 1371, 1668
HpyF10VI	GCNNNNNNNGC	6 cut(s)	364, 1278, 1466, 1672, 1681, 2523
HpyF3I	CTNAG	9 cut(s)	308, 327, 896, 1097, 1301, 1393, 1418, 1461, 1853
HpySE526I	ACGT	3 cut(s)	909, 1371, 1668
HspAI	GCGC	1 cut(s)	13
Ksp22I	TGATCA	3 cut(s)	625, 1536, 2328
KspAI	GTTAAC	1 cut(s)	1126
LguI	GCTCTTC	2 cut(s)	39, 2541
LmnI	GCTCC	4 cut(s)	54, 578, 900, 2083
LweI	GCATC	6 cut(s)	330, 341, 579, 586, 1088, 2410
MaeII	ACGT	3 cut(s)	909, 1371, 1668
MaeIII	GTNAC	3 cut(s)	1186, 1259, 1848
MboII	GAAGA	9 cut(s)	56, 232, 689, 696, 777, 1540, 1580, 1826, 2558
MfeI	CAATTG	2 cut(s)	153, 2422
MflI	RGATCY	3 cut(s)	533, 1660, 2323
MhlI	GDGCHC	6 cut(s)	51, 998, 1546, 1910, 2098, 2519
MlyI	GAGTC	1 cut(s)	68
MmeI	TCCRAC	4 cut(s)	1895, 2095, 2127, 2514
Mph1103I	ATGCAT	1 cut(s)	1934
MroXI	GAANNNNTTC	2 cut(s)	1429, 1800
MslI	CAYNNNNRTG	3 cut(s)	455, 1855, 2166
MspA1I	CMGCKG	1 cut(s)	2015
MspI	CCGG	5 cut(s)	689, 890, 1652, 2098, 2138
MunI	CAATTG	2 cut(s)	153, 2422
Mva1269I	GAATGC	1 cut(s)	2173
MvaI	CCWGG	7 cut(s)	447, 531, 1525, 1689, 1717, 1975, 2054
MwoI	GCNNNNNNNGC	6 cut(s)	364, 1278, 1466, 1672, 1681, 2523
NciI	CCSGG	3 cut(s)	1653, 2098, 2138
NcoI	CCATGG	1 cut(s)	2161
NdeI	CATATG	1 cut(s)	2188
NheI	GCTAGC	2 cut(s)	200, 1465
NlaIV	GGNNCC	5 cut(s)	535, 1544, 2085, 2119, 2352
NmeAIII	GCCGAG	1 cut(s)	457
NmuCI	GTSAC	3 cut(s)	1186, 1259, 1848
NsiI	ATGCAT	1 cut(s)	1934
NspI	RCATGY	5 cut(s)	24, 97, 1281, 1339, 1765
NspV	TTCGAA	1 cut(s)	1157
PaeI	GCATGC	1 cut(s)	97
PceI	AGGCCT	2 cut(s)	2337, 2418
PciI	ACATGT	2 cut(s)	20, 1335
PciSI	GCTCTTC	2 cut(s)	39, 2541
PctI	GAATGC	1 cut(s)	2173
PdmI	GAANNNNTTC	2 cut(s)	1429, 1800
PfeI	GAWTC	9 cut(s)	35, 692, 701, 935, 989, 1425, 1937, 2193, 2434
PfoI	TCCNGGA	1 cut(s)	529
PleI	GAGTC	1 cut(s)	67
PmaCI	CACGTG	1 cut(s)	1669
PmlI	CACGTG	1 cut(s)	1669
PpsI	GAGTC	1 cut(s)	67
Ppu21I	YACGTR	1 cut(s)	1669
PpuMI	RGGWCCY	1 cut(s)	2350
PscI	ACATGT	2 cut(s)	20, 1335
PshBI	ATTAAT	2 cut(s)	135, 780
Psp124BI	GAGCTC	1 cut(s)	51
Psp5II	RGGWCCY	1 cut(s)	2350
Psp6I	CCWGG	7 cut(s)	445, 529, 1523, 1687, 1715, 1973, 2052
PspCI	CACGTG	1 cut(s)	1669
PspGI	CCWGG	7 cut(s)	445, 529, 1523, 1687, 1715, 1973, 2052
PspN4I	GGNNCC	5 cut(s)	535, 1544, 2085, 2119, 2352
PspOMI	GGGCCC	1 cut(s)	1542
PspPI	GGNCC	7 cut(s)	443, 1018, 1542, 1543, 1807, 2100, 2350
PspPPI	RGGWCCY	1 cut(s)	2350
PstI	CTGCAG	2 cut(s)	1186, 2389
PstNI	CAGNNNCTG	1 cut(s)	287
PsuI	RGATCY	3 cut(s)	533, 1660, 2323
RsaI	GTAC	7 cut(s)	7, 1003, 1036, 1090, 1135, 2448, 2488
RsaNI	GTAC	7 cut(s)	6, 1002, 1035, 1089, 1134, 2447, 2487
RseI	CAYNNNNRTG	3 cut(s)	455, 1855, 2166
SacI	GAGCTC	1 cut(s)	51
SapI	GCTCTTC	2 cut(s)	39, 2541
Sau96I	GGNCC	7 cut(s)	443, 1018, 1542, 1543, 1807, 2100, 2350
ScaI	AGTACT	1 cut(s)	1003
SchI	GAGTC	1 cut(s)	68
SduI	GDGCHC	6 cut(s)	51, 998, 1546, 1910, 2098, 2519
SfaNI	GCATC	6 cut(s)	330, 341, 579, 586, 1088, 2410
SfcI	CTRYAG	3 cut(s)	1182, 2301, 2385
SfuI	TTCGAA	1 cut(s)	1157
SinI	GGWCC	4 cut(s)	1018, 1807, 2100, 2350
SmiMI	CAYNNNNRTG	3 cut(s)	455, 1855, 2166
SmlI	CTYRAG	2 cut(s)	1348, 2282
SmoI	CTYRAG	2 cut(s)	1348, 2282
SpeI	ACTAGT	2 cut(s)	1283, 2090
SphI	GCATGC	1 cut(s)	97
SseBI	AGGCCT	2 cut(s)	2337, 2418
SsiI	CCGC	8 cut(s)	355, 620, 749, 1320, 1675, 2010, 2013, 2450
SspI	AATATT	2 cut(s)	116, 1801
SstI	GAGCTC	1 cut(s)	51
StuI	AGGCCT	2 cut(s)	2337, 2418
StyI	CCWWGG	2 cut(s)	1746, 2161
TaaI	ACNGT	6 cut(s)	424, 925, 1034, 1166, 1265, 1450
TaiI	ACGT	3 cut(s)	912, 1374, 1671
TaqI	TCGA	6 cut(s)	123, 668, 1157, 1780, 2026, 2273
TatI	WGTACW	4 cut(s)	5, 1001, 1034, 1088
TauI	GCSGC	4 cut(s)	358, 1323, 1678, 2015
TfiI	GAWTC	9 cut(s)	35, 692, 701, 935, 989, 1425, 1937, 2193, 2434
TscAI	CASTG	6 cut(s)	429, 772, 844, 1149, 1191, 2379
TseFI	GTSAC	3 cut(s)	1186, 1259, 1848
Tsp45I	GTSAC	3 cut(s)	1186, 1259, 1848
TspDTI	ATGAA	9 cut(s)	243, 245, 365, 366, 633, 696, 707, 1062, 2139
TspRI	CASTG	6 cut(s)	429, 772, 844, 1149, 1191, 2379
VpaK11BI	GGWCC	4 cut(s)	1018, 1807, 2100, 2350
VspI	ATTAAT	2 cut(s)	135, 780
XapI	RAATTY	4 cut(s)	276, 514, 790, 1111
XceI	RCATGY	5 cut(s)	24, 97, 1281, 1339, 1765
XcmI	CCANNNNNNNNNTGG	2 cut(s)	719, 1382
XmnI	GAANNNNTTC	2 cut(s)	1429, 1800
ZrmI	AGTACT	1 cut(s)	1003
Zsp2I	ATGCAT	1 cut(s)	1934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.