pycom11g13040

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
12131248 .. 12132855
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g13040.1

Sequence Viewer

Length: 1608 bp
ATGAGTACATTGCGCTCGACGTGTGAAATTGTTGAATCAAGAGAAGAGGTCCATTCGGAGTCCAAAATGGATGAGGAAGGTGGAAAACACTGTATGCTGAAATCAGAAAACAAATATTCCATCGAGGATGATATTAATCAGCTTTTTCAGGCAATTGGTGGTAGAAAGTCAGCTAGGATATCAGGTATGTCGCATGAGGCTAGTAAAGAAGCTTTGAGGAAGAGTGCTATGAAAAGGCCAATGAGAGTTAGTTCATCAAATGCATCAGGTATCGGAATTTCAGAGCCTGTGAGTTTGAAACAAGCACTAAGAGGATTGTGCATCACTCAGGCATCAGAGTTGGCTGCCATGAAGCGGTTTTCGAGGCCAGGTCGTTCGTCAGGGGTCTCAGAATCAGGAACTATCAAAAGGTTGTACGGCACAGTGGTAGCCGAGGCCAACGGGACTGGCCTGCCTATGACTGAAGGTAAAGGGAATTATGTAGAGGTGTCCCTTGTGCCTGAAGCATCCAAAAATTCTGAAAACAATCCTGGGTCCATGCAATCAGAGACACAGGTTGATACGGCCACAACTTTGGGCGCTGCACTGATGCCAGATGCTAGTAAGATCAGATTAGCACCACATGATCAAATTGCTCCTTCTTCAACATCAATGAAAAGTGAGATATCAAGGGGAGGAGATAGAGAACTGGAATCAGCAGAATCTTCATCTTGCTTTCATGATAGCAAGAAAATCATGCAGAGGGGTGCAGTTGCTTCTATCTCAACCGAAGTTCCAATTAATACTTCAAATTCAAACAAGGGGCTGCACTCTGCTTCTTCTCCATCTGGCTCTAGCACTGGTAGTAAGGTAAGCAAATCCTCTGGCAGTAGTTCACATTTAATCAAGCCGGTACCAAGGAGCAAAAATATTGTTAAGAAAAAAGTGCACGATTCAAGTTCTGGCTCTAGTAGTTCGAAATCAGATAACCGACAGGTTGATAATGATGCATGCTCTAGTACTAGTAAGTTAAAGGACCAGACACTCAACTGTATTCCGAAGCATGAAGGGAAAGGAAATGAGAAAGAGTCTCTAGCATCAAGCACTACGAGTCTTAGCAAAGAAATGAATTCAGGTACAAGCAAACCAGATTTCTCCTCAAATAGCAGCAGTAGGATTAACTCTGTAGTGACAAAAGTTGATGAGAGGTCAAGATCAAGGGAAAACGGGGATTTTTCACAAAGCTCAAAAAGTAGCATTGGTGACTATAGCAGCACTACATGCACTAGTGAGGAAAGCAGTCTAAGTGGTTCTGGTCGTAGCGGCAAGAGGCCTCACATGTCAAGAGACTTGAGATGGGAAGCCATCCATCATGTACAGAAGCAGCATGGAAGCTTAGGTTTGAAGCACTTTAAGTTGCTTAGAAGGATTGGTTCCGGGGACATTGGGACTGTTTATCTTGCTGAGCTAACTGGAACAAATTGCATATTTGCTTTGAAAGTGATGGACAACGAGTTTTTGGCTACCAGGAAGAAAATGATCGATCAGAACCCAAACAGAAAGAGAGATACTAGAAATACTGGATCATCCGTTTCTTCCTACACTATATTCCCATTGTGTGTCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

536

Amino Acids

57.43

Weight (kDa)

9.43

Isoelectric Point (pI)

51.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 892
AccB1I GGYRCC 1 cut(s) 892
AciI CCGC 2 cut(s) 355, 1302
AclWI GGATC 1 cut(s) 1570
AcoI YGGCCR 1 cut(s) 564
AcsI RAATTY 4 cut(s) 276, 514, 790, 1108
AcuI CTGAAG 2 cut(s) 483, 522
AfaI GTAC 6 cut(s) 7, 416, 894, 1000, 1117, 1356
AfiI CCNNNNNNNGG 1 cut(s) 354
AflIII ACRYGT 2 cut(s) 20, 1317
AgsI TTSAA 8 cut(s) 35, 298, 645, 789, 795, 936, 1384, 1477
AhlI ACTAGT 2 cut(s) 1001, 1265
AjiI CACGTC 1 cut(s) 21
AjnI CCWGG 3 cut(s) 367, 529, 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AluBI AGCT 6 cut(s) 142, 173, 212, 1224, 1374, 1447
AluI AGCT 6 cut(s) 142, 173, 212, 1224, 1374, 1447
Alw21I GWGCWC 1 cut(s) 930
Alw26I GTCTC 4 cut(s) 391, 542, 1074, 1320
Alw44I GTGCAC 1 cut(s) 926
AlwI GGATC 1 cut(s) 1570
AlwNI CAGNNNCTG 1 cut(s) 287
AoxI GGCC 6 cut(s) 236, 365, 435, 448, 564, 1310
ApaLI GTGCAC 1 cut(s) 926
ApeKI GCWGC 6 cut(s) 344, 581, 805, 1146, 1251, 1363
ApoI RAATTY 4 cut(s) 276, 514, 790, 1108
AseI ATTAAT 2 cut(s) 135, 780
Asp718I GGTACC 1 cut(s) 892
AspLEI GCGC 2 cut(s) 15, 581
AspS9I GGNCC 3 cut(s) 49, 534, 1015
AsuC2I CCSGG 1 cut(s) 1417
AsuHPI GGTGA 1 cut(s) 1253
AsuII TTCGAA 1 cut(s) 956
AvaII GGWCC 3 cut(s) 49, 534, 1015
BaeGI GKGCMC 1 cut(s) 930
BanI GGYRCC 1 cut(s) 892
Bbv12I GWGCWC 1 cut(s) 930
BbvI GCAGC 6 cut(s) 331, 568, 792, 1158, 1263, 1375
BccI CCATC 6 cut(s) 128, 832, 1329, 1352, 1356, 1477
BceAI ACGGC 2 cut(s) 433, 579
BciT130I CCWGG 3 cut(s) 369, 531, 1507
BclI TGATCA 1 cut(s) 625
BcnI CCSGG 1 cut(s) 1417
BcoDI GTCTC 4 cut(s) 391, 542, 1074, 1320
BcuI ACTAGT 2 cut(s) 1001, 1265
BfmI CTRYAG 2 cut(s) 1164, 1246
BfoI RGCGCY 1 cut(s) 582
BisI GCNGC 7 cut(s) 345, 582, 806, 1147, 1252, 1303, 1364
BlpI GCTNAGC 1 cut(s) 1443
BlsI GCNGC 7 cut(s) 346, 583, 807, 1148, 1253, 1304, 1365
BmcAI AGTACT 1 cut(s) 1000
Bme1390I CCNGG 4 cut(s) 369, 531, 1417, 1507
Bme18I GGWCC 3 cut(s) 49, 534, 1015
BmgBI CACGTC 1 cut(s) 21
BmgT120I GGNCC 3 cut(s) 49, 534, 1015
BmiI GGNNCC 3 cut(s) 535, 894, 1414
BmrFI CCNGG 4 cut(s) 369, 531, 1417, 1507
BmsI GCATC 8 cut(s) 272, 330, 341, 515, 579, 586, 976, 1085
Bpu10I CCTNAGC 1 cut(s) 1375
Bpu1102I GCTNAGC 1 cut(s) 1443
Bpu14I TTCGAA 1 cut(s) 956
BpuEI CTTGAG 1 cut(s) 1351
BpuMI CCSGG 1 cut(s) 1417
Bsa29I ATCGAT 1 cut(s) 1521
BsaBI GATNNNNATC 1 cut(s) 135
BsaI GGTCTC 1 cut(s) 391
BsaJI CCNNGG 4 cut(s) 432, 530, 896, 1416
Bsc4I CCNNNNNNNGG 1 cut(s) 354
Bse118I RCCGGY 1 cut(s) 889
Bse1I ACTGG 5 cut(s) 451, 693, 844, 1456, 1564
Bse3DI GCAATG 1 cut(s) 8
Bse8I GATNNNNATC 1 cut(s) 135
BseBI CCWGG 3 cut(s) 369, 531, 1507
BseCI ATCGAT 1 cut(s) 1521
BseDI CCNNGG 4 cut(s) 432, 530, 896, 1416
BseGI GGATG 5 cut(s) 76, 133, 506, 1344, 1565
BseJI GATNNNNATC 1 cut(s) 135
BseLI CCNNNNNNNGG 1 cut(s) 354
BseMI GCAATG 1 cut(s) 8
BseMII CTCAG 3 cut(s) 341, 402, 1434
BseNI ACTGG 5 cut(s) 451, 693, 844, 1456, 1564
BseRI GAGGAG 2 cut(s) 690, 1126
BseSI GKGCMC 1 cut(s) 930
BseXI GCAGC 6 cut(s) 331, 568, 792, 1158, 1263, 1375
BsgI GTGCAG 3 cut(s) 567, 768, 791
BshFI GGCC 6 cut(s) 238, 367, 437, 450, 566, 1312
BshNI GGYRCC 1 cut(s) 892
BshVI ATCGAT 1 cut(s) 1521
BsiHKAI GWGCWC 1 cut(s) 930
BsiSI CCGG 2 cut(s) 890, 1416
BslFI GGGAC 4 cut(s) 457, 475, 1433, 1441
BslI CCNNNNNNNGG 1 cut(s) 354
BsmAI GTCTC 4 cut(s) 391, 542, 1074, 1320
BsmFI GGGAC 4 cut(s) 457, 475, 1433, 1441
BsnI GGCC 6 cut(s) 238, 367, 437, 450, 566, 1312
Bso31I GGTCTC 1 cut(s) 391
Bsp119I TTCGAA 1 cut(s) 956
Bsp1286I GDGCHC 1 cut(s) 930
Bsp1407I TGTACA 1 cut(s) 1354
Bsp143I GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
Bsp1720I GCTNAGC 1 cut(s) 1443
BspACI CCGC 2 cut(s) 355, 1302
BspANI GGCC 6 cut(s) 238, 367, 437, 450, 566, 1312
BspCNI CTCAG 3 cut(s) 340, 401, 1435
BspDI ATCGAT 1 cut(s) 1521
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 3 cut(s) 535, 894, 1414
BspPI GGATC 1 cut(s) 1570
BspT104I TTCGAA 1 cut(s) 956
BspT107I GGYRCC 1 cut(s) 892
BspTNI GGTCTC 1 cut(s) 391
BsrDI GCAATG 1 cut(s) 8
BsrFI RCCGGY 1 cut(s) 889
BsrGI TGTACA 1 cut(s) 1354
BsrI ACTGG 5 cut(s) 451, 693, 844, 1456, 1564
BssAI RCCGGY 1 cut(s) 889
BssECI CCNNGG 4 cut(s) 432, 530, 896, 1416
BssMI GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
BssT1I CCWWGG 1 cut(s) 896
Bst2UI CCWGG 3 cut(s) 369, 531, 1507
Bst4CI ACNGT 4 cut(s) 92, 424, 1031, 1432
Bst6I CTCTTC 2 cut(s) 39, 215
BstAPI GCANNNNNTGC 1 cut(s) 1260
BstAUI TGTACA 1 cut(s) 1354
BstBI TTCGAA 1 cut(s) 956
BstC8I GCNNGC 2 cut(s) 452, 991
BstDEI CTNAG 8 cut(s) 308, 327, 388, 1094, 1283, 1375, 1400, 1443
BstF5I GGATG 5 cut(s) 76, 133, 506, 1344, 1565
BstH2I RGCGCY 1 cut(s) 582
BstHHI GCGC 2 cut(s) 15, 581
BstKTI GATC 6 cut(s) 609, 628, 1196, 1521, 1525, 1565
BstMAI GTCTC 4 cut(s) 391, 542, 1074, 1320
BstMBI GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
BstMWI GCNNNNNNNGC 1 cut(s) 1260
BstNI CCWGG 3 cut(s) 369, 531, 1507
BstNSI RCATGY 3 cut(s) 993, 1263, 1321
BstSCI CCNGG 4 cut(s) 367, 529, 1415, 1505
BstSFI CTRYAG 2 cut(s) 1164, 1246
BstSLI GKGCMC 1 cut(s) 930
BstV1I GCAGC 6 cut(s) 331, 568, 792, 1158, 1263, 1375
BstXI CCANNNNNNTGG 1 cut(s) 574
Bsu15I ATCGAT 1 cut(s) 1521
BsuRI GGCC 6 cut(s) 238, 367, 437, 450, 566, 1312
BsuTUI ATCGAT 1 cut(s) 1521
BtrI CACGTC 1 cut(s) 21
BtsCI GGATG 5 cut(s) 76, 133, 506, 1344, 1565
BtsIMutI CAGTG 4 cut(s) 88, 429, 584, 837
Cac8I GCNNGC 2 cut(s) 452, 991
CaiI CAGNNNCTG 1 cut(s) 287
CciI TCATGA 1 cut(s) 718
CfoI GCGC 2 cut(s) 15, 581
Cfr10I RCCGGY 1 cut(s) 889
Cfr13I GGNCC 3 cut(s) 49, 534, 1015
ClaI ATCGAT 1 cut(s) 1521
Csp6I GTAC 6 cut(s) 6, 415, 893, 999, 1116, 1355
CviQI GTAC 6 cut(s) 6, 415, 893, 999, 1116, 1355
DdeI CTNAG 8 cut(s) 308, 327, 388, 1094, 1283, 1375, 1400, 1443
DpnI GATC 6 cut(s) 608, 627, 1195, 1520, 1524, 1564
DpnII GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
EaeI YGGCCR 1 cut(s) 564
Eam1104I CTCTTC 2 cut(s) 39, 215
EarI CTCTTC 2 cut(s) 39, 215
Eco130I CCWWGG 1 cut(s) 896
Eco147I AGGCCT 1 cut(s) 1312
Eco31I GGTCTC 1 cut(s) 391
Eco32I GATATC 2 cut(s) 180, 666
Eco47I GGWCC 3 cut(s) 49, 534, 1015
Eco57I CTGAAG 2 cut(s) 483, 522
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 3 cut(s) 367, 529, 1505
EcoRV GATATC 2 cut(s) 180, 666
EcoT14I CCWWGG 1 cut(s) 896
EcoT22I ATGCAT 2 cut(s) 265, 991
ErhI CCWWGG 1 cut(s) 896
FaqI GGGAC 4 cut(s) 457, 475, 1433, 1441
FbaI TGATCA 1 cut(s) 625
Fnu4HI GCNGC 7 cut(s) 345, 582, 806, 1147, 1252, 1303, 1364
FokI GGATG 5 cut(s) 83, 140, 493, 1331, 1552
Fsp4HI GCNGC 7 cut(s) 345, 582, 806, 1147, 1252, 1303, 1364
GlaI GCGC 2 cut(s) 14, 580
GluI GCNGC 7 cut(s) 345, 582, 806, 1147, 1252, 1303, 1364
HaeII RGCGCY 1 cut(s) 582
HaeIII GGCC 6 cut(s) 238, 367, 437, 450, 566, 1312
HapII CCGG 2 cut(s) 890, 1416
HhaI GCGC 2 cut(s) 15, 581
Hin6I GCGC 2 cut(s) 13, 579
HinP1I GCGC 2 cut(s) 13, 579
HindIII AAGCTT 2 cut(s) 210, 1372
HinfI GANTC 8 cut(s) 35, 59, 392, 692, 701, 932, 1067, 1090
HpaII CCGG 2 cut(s) 890, 1416
HphI GGTGA 1 cut(s) 1253
Hpy166II GTNNAC 2 cut(s) 875, 928
Hpy188III TCNNGA 5 cut(s) 39, 396, 719, 1191, 1323
Hpy8I GTNNAC 2 cut(s) 875, 928
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 5 cut(s) 71, 458, 648, 1040, 1398
HpyCH4III ACNGT 4 cut(s) 92, 424, 1031, 1432
HpyCH4IV ACGT 1 cut(s) 20
HpyF10VI GCNNNNNNNGC 1 cut(s) 1260
HpyF3I CTNAG 8 cut(s) 308, 327, 388, 1094, 1283, 1375, 1400, 1443
HpySE526I ACGT 1 cut(s) 20
HspAI GCGC 2 cut(s) 13, 579
KpnI GGTACC 1 cut(s) 896
Ksp22I TGATCA 1 cut(s) 625
Kzo9I GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
LmnI GCTCC 2 cut(s) 640, 900
Lsp1109I GCAGC 6 cut(s) 331, 568, 792, 1158, 1263, 1375
LweI GCATC 8 cut(s) 272, 330, 341, 515, 579, 586, 976, 1085
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 1168, 1241
MalI GATC 6 cut(s) 608, 627, 1195, 1520, 1524, 1564
MboI GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
MboII GAAGA 7 cut(s) 56, 232, 633, 696, 810, 1522, 1566
MfeI CAATTG 1 cut(s) 153
MhlI GDGCHC 1 cut(s) 930
MlyI GAGTC 3 cut(s) 68, 1076, 1099
Mph1103I ATGCAT 2 cut(s) 265, 991
MseI TTAA 7 cut(s) 135, 780, 881, 915, 1010, 1158, 1392
MspI CCGG 2 cut(s) 890, 1416
MspR9I CCNGG 4 cut(s) 369, 531, 1417, 1507
MunI CAATTG 1 cut(s) 153
MvaI CCWGG 3 cut(s) 369, 531, 1507
MwoI GCNNNNNNNGC 1 cut(s) 1260
NciI CCSGG 1 cut(s) 1417
NdeII GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
NlaIV GGNNCC 3 cut(s) 535, 894, 1414
NmeAIII GCCGAG 1 cut(s) 457
NmuCI GTSAC 2 cut(s) 1168, 1241
NsiI ATGCAT 2 cut(s) 265, 991
NspI RCATGY 3 cut(s) 993, 1263, 1321
NspV TTCGAA 1 cut(s) 956
PaeI GCATGC 1 cut(s) 993
PagI TCATGA 1 cut(s) 718
PceI AGGCCT 1 cut(s) 1312
PciI ACATGT 1 cut(s) 1317
PfeI GAWTC 5 cut(s) 35, 392, 692, 701, 932
PkrI GCNGC 7 cut(s) 346, 583, 807, 1148, 1253, 1304, 1365
PleI GAGTC 3 cut(s) 67, 1075, 1098
PpsI GAGTC 3 cut(s) 67, 1075, 1098
PscI ACATGT 1 cut(s) 1317
PshBI ATTAAT 2 cut(s) 135, 780
Psp6I CCWGG 3 cut(s) 367, 529, 1505
PspGI CCWGG 3 cut(s) 367, 529, 1505
PspN4I GGNNCC 3 cut(s) 535, 894, 1414
PspPI GGNCC 3 cut(s) 49, 534, 1015
PstNI CAGNNNCTG 1 cut(s) 287
RsaI GTAC 6 cut(s) 7, 416, 894, 1000, 1117, 1356
RsaNI GTAC 6 cut(s) 6, 415, 893, 999, 1116, 1355
SaqAI TTAA 7 cut(s) 135, 780, 881, 915, 1010, 1158, 1392
SatI GCNGC 7 cut(s) 345, 582, 806, 1147, 1252, 1303, 1364
Sau3AI GATC 6 cut(s) 606, 625, 1193, 1518, 1522, 1562
Sau96I GGNCC 3 cut(s) 49, 534, 1015
ScaI AGTACT 1 cut(s) 1000
SchI GAGTC 3 cut(s) 68, 1076, 1099
ScrFI CCNGG 4 cut(s) 369, 531, 1417, 1507
SduI GDGCHC 1 cut(s) 930
SfaNI GCATC 8 cut(s) 272, 330, 341, 515, 579, 586, 976, 1085
SfcI CTRYAG 2 cut(s) 1164, 1246
SfuI TTCGAA 1 cut(s) 956
SinI GGWCC 3 cut(s) 49, 534, 1015
SmlI CTYRAG 1 cut(s) 1330
SmoI CTYRAG 1 cut(s) 1330
SpeI ACTAGT 2 cut(s) 1001, 1265
SphI GCATGC 1 cut(s) 993
SseBI AGGCCT 1 cut(s) 1312
SsiI CCGC 2 cut(s) 355, 1302
SspI AATATT 2 cut(s) 116, 910
StuI AGGCCT 1 cut(s) 1312
StyD4I CCNGG 4 cut(s) 367, 529, 1415, 1505
StyI CCWWGG 1 cut(s) 896
TaaI ACNGT 4 cut(s) 92, 424, 1031, 1432
TaiI ACGT 1 cut(s) 23
TaqI TCGA 5 cut(s) 17, 123, 362, 956, 1521
TatI WGTACW 3 cut(s) 5, 998, 1354
TauI GCSGC 1 cut(s) 1305
TfiI GAWTC 5 cut(s) 35, 392, 692, 701, 932
Tru1I TTAA 7 cut(s) 135, 780, 881, 915, 1010, 1158, 1392
Tru9I TTAA 7 cut(s) 135, 780, 881, 915, 1010, 1158, 1392
TscAI CASTG 4 cut(s) 95, 429, 591, 844
TseFI GTSAC 2 cut(s) 1168, 1241
TseI GCWGC 6 cut(s) 344, 581, 805, 1146, 1251, 1363
Tsp45I GTSAC 2 cut(s) 1168, 1241
TspDTI ATGAA 8 cut(s) 243, 245, 365, 668, 696, 707, 1059, 1121
TspGWI ACGGA 1 cut(s) 1558
TspRI CASTG 4 cut(s) 95, 429, 591, 844
VneI GTGCAC 1 cut(s) 926
VpaK11BI GGWCC 3 cut(s) 49, 534, 1015
VspI ATTAAT 2 cut(s) 135, 780
XapI RAATTY 4 cut(s) 276, 514, 790, 1108
XceI RCATGY 3 cut(s) 993, 1263, 1321
ZrmI AGTACT 1 cut(s) 1000
Zsp2I ATGCAT 2 cut(s) 265, 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.