chromodomain-helicase-DNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G13370 AT2G13370 AT2G13370 |
| fragaria_vesca | FvH4_3g28110 FvH4_3g28110 FvH4_3g28110 FvH4_3g28110 |
| malus_domestica | MD03G1168800.v1.1 MD11G1194800.v1.1 |
| prunus_persica | Prupe.4G258700_v2.0.a1 Prupe.4G258700_v2.0.a1 Prupe.4G258700_v2.0.a1 Prupe.4G258700_v2.0.a1 |
| pyrus_communis | pycom03g12510 pycom11g16330 |
| rosa_chinensis | RchiOBHm_Chr5g0050791 |
| rosa_laevigata | RLG00000034733 RLG00000034734 RLG00000034735 |
| rosa_roxburghii | Rroxscaffold_1G00029940 |
| rosa_samantha | Rh5BG345500 Rh5CG373300 Rh5DG358700 |
| rosa_wichuraiana | Rw5G031700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 2348, 2613, 3086 |
| AarI | CACCTGC | 1 cut(s) | 3035 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 477 |
| Acc36I | ACCTGC | 2 cut(s) | 3035, 3129 |
| Acc65I | GGTACC | 1 cut(s) | 5084 |
| AccB1I | GGYRCC | 2 cut(s) | 5084, 5207 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2986, 4882 |
| AccI | GTMKAC | 1 cut(s) | 935 |
| AccII | CGCG | 1 cut(s) | 5225 |
| AccIII | TCCGGA | 1 cut(s) | 1645 |
| AciI | CCGC | 7 cut(s) | 1081, 1612, 2808, 2909, 2944, 5225, 5234 |
| AclWI | GGATC | 8 cut(s) | 400, 740, 1316, 1329, 1794, 1999, 4076, 5093 |
| AcoI | YGGCCR | 3 cut(s) | 1093, 2167, 5192 |
| AcuI | CTGAAG | 6 cut(s) | 417, 1311, 1704, 2582, 3546, 3585 |
| AcvI | CACGTG | 1 cut(s) | 1523 |
| AdeI | CACNNNGTG | 3 cut(s) | 44, 335, 1546 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 260, 261, 776, 1222, 1506, 2986, 4448, 4882, 5053 |
| AflII | CTTAAG | 1 cut(s) | 3409 |
| AjnI | CCWGG | 6 cut(s) | 48, 1499, 3004, 3213, 4053, 4875 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1932, 1964 |
| AleI | CACNNNNGTG | 1 cut(s) | 3731 |
| Alw21I | GWGCWC | 3 cut(s) | 637, 3142, 4300 |
| Alw26I | GTCTC | 5 cut(s) | 1162, 2595, 3792, 4834, 4929 |
| Alw44I | GTGCAC | 1 cut(s) | 633 |
| AlwI | GGATC | 8 cut(s) | 400, 740, 1316, 1329, 1794, 1999, 4076, 5093 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3635 |
| Ama87I | CYCGRG | 2 cut(s) | 1826, 3039 |
| Aor13HI | TCCGGA | 1 cut(s) | 1645 |
| ApaLI | GTGCAC | 1 cut(s) | 633 |
| ApeKI | GCWGC | 8 cut(s) | 212, 707, 1757, 2805, 3887, 3890, 3939, 4346 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 84, 2571 |
| Asp718I | GGTACC | 1 cut(s) | 5084 |
| AspA2I | CCTAGG | 1 cut(s) | 64 |
| AspLEI | GCGC | 5 cut(s) | 327, 561, 1797, 3004, 4797 |
| AsuC2I | CCSGG | 2 cut(s) | 4834, 5089 |
| AsuHPI | GGTGA | 8 cut(s) | 692, 836, 1133, 1256, 3265, 3718, 4031, 4553 |
| AsuII | TTCGAA | 2 cut(s) | 2521, 4705 |
| AvaI | CYCGRG | 2 cut(s) | 1826, 3039 |
| AvaII | GGWCC | 5 cut(s) | 1643, 3970, 4922, 4982, 5129 |
| AvrII | CCTAGG | 1 cut(s) | 64 |
| AxyI | CCTNAGG | 2 cut(s) | 1278, 3684 |
| BaeGI | GKGCMC | 1 cut(s) | 637 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 225, 258, 1908, 1941 |
| BamHI | GGATCC | 1 cut(s) | 1321 |
| BanI | GGYRCC | 2 cut(s) | 5084, 5207 |
| BanII | GRGCYC | 2 cut(s) | 2392, 3142 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1090, 1122 |
| BauI | CACGAG | 3 cut(s) | 2112, 3600, 3816 |
| BbrPI | CACGTG | 1 cut(s) | 1523 |
| BbsI | GAAGAC | 4 cut(s) | 3021, 3327, 3768, 4637 |
| Bbv12I | GWGCWC | 3 cut(s) | 637, 3142, 4300 |
| BbvCI | CCTCAGC | 2 cut(s) | 1012, 3357 |
| BbvI | GCAGC | 8 cut(s) | 224, 694, 1744, 2817, 3899, 3902, 3926, 4358 |
| BceAI | ACGGC | 1 cut(s) | 5192 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3181, 3215, 4070, 4104 |
| BciT130I | CCWGG | 6 cut(s) | 50, 1501, 3006, 3215, 4055, 4877 |
| BclI | TGATCA | 2 cut(s) | 3637, 4026 |
| BcnI | CCSGG | 2 cut(s) | 4834, 5089 |
| BcoDI | GTCTC | 5 cut(s) | 1162, 2595, 3792, 4834, 4929 |
| BfaI | CTAG | 9 cut(s) | 65, 192, 597, 651, 966, 1140, 1655, 3609, 4467 |
| BfmI | CTRYAG | 6 cut(s) | 376, 495, 562, 640, 3122, 3468 |
| BfrI | CTTAAG | 1 cut(s) | 3409 |
| BfuAI | ACCTGC | 2 cut(s) | 3035, 3129 |
| BglII | AGATCT | 2 cut(s) | 697, 1567 |
| BlnI | CCTAGG | 1 cut(s) | 64 |
| BlpI | GCTNAGC | 2 cut(s) | 5229, 5237 |
| BmcAI | AGTACT | 1 cut(s) | 1022 |
| Bme1390I | CCNGG | 8 cut(s) | 50, 1501, 3006, 3215, 4055, 4834, 4877, 5089 |
| Bme18I | GGWCC | 5 cut(s) | 1643, 3970, 4922, 4982, 5129 |
| BmeT110I | CYCGRG | 2 cut(s) | 1826, 3039 |
| BmrFI | CCNGG | 8 cut(s) | 50, 1501, 3006, 3215, 4055, 4834, 4877, 5089 |
| BmrI | ACTGGG | 1 cut(s) | 2062 |
| BmuI | ACTGGG | 1 cut(s) | 2062 |
| BpiI | GAAGAC | 4 cut(s) | 3021, 3327, 3768, 4637 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3124, 3156 |
| BpmI | CTGGAG | 3 cut(s) | 1775, 3236, 4242 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1012, 3357 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 5229, 5237 |
| Bpu14I | TTCGAA | 2 cut(s) | 2521, 4705 |
| BpuEI | CTTGAG | 3 cut(s) | 1898, 2746, 3744 |
| BpuMI | CCSGG | 2 cut(s) | 4834, 5089 |
| Bsa29I | ATCGAT | 1 cut(s) | 1734 |
| BsaAI | YACGTR | 1 cut(s) | 1523 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1365, 3105 |
| BsaI | GGTCTC | 1 cut(s) | 1162 |
| BsaJI | CCNNGG | 5 cut(s) | 64, 2008, 3052, 4192, 4833 |
| BsaWI | WCCGGW | 1 cut(s) | 1645 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2341, 2371, 2903, 2933, 4754, 4784 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 260, 261, 776, 1222, 1506, 2986, 4448, 4882, 5053 |
| Bse118I | RCCGGY | 1 cut(s) | 2169 |
| Bse1I | ACTGG | 6 cut(s) | 1114, 2057, 2356, 2910, 4259, 4458 |
| Bse21I | CCTNAGG | 2 cut(s) | 1278, 3684 |
| Bse3DI | GCAATG | 6 cut(s) | 1767, 2991, 3135, 3803, 3983, 4423 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1365, 3105 |
| BseAI | TCCGGA | 1 cut(s) | 1645 |
| BseBI | CCWGG | 6 cut(s) | 50, 1501, 3006, 3215, 4055, 4877 |
| BseCI | ATCGAT | 1 cut(s) | 1734 |
| BseDI | CCNNGG | 5 cut(s) | 64, 2008, 3052, 4192, 4833 |
| BseJI | GATNNNNATC | 2 cut(s) | 1365, 3105 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 260, 261, 776, 1222, 1506, 2986, 4448, 4882, 5053 |
| BseMI | GCAATG | 6 cut(s) | 1767, 2991, 3135, 3803, 3983, 4423 |
| BseNI | ACTGG | 6 cut(s) | 1114, 2057, 2356, 2910, 4259, 4458 |
| BseSI | GKGCMC | 1 cut(s) | 637 |
| BseXI | GCAGC | 8 cut(s) | 224, 694, 1744, 2817, 3899, 3902, 3926, 4358 |
| BsgI | GTGCAG | 4 cut(s) | 783, 3900, 3925, 5145 |
| Bsh1236I | CGCG | 1 cut(s) | 5225 |
| Bsh1285I | CGRYCG | 1 cut(s) | 631 |
| BshNI | GGYRCC | 2 cut(s) | 5084, 5207 |
| BshVI | ATCGAT | 1 cut(s) | 1734 |
| BsiEI | CGRYCG | 1 cut(s) | 631 |
| BsiHKAI | GWGCWC | 3 cut(s) | 637, 3142, 4300 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1826, 3039 |
| BsiSI | CCGG | 4 cut(s) | 1646, 2170, 4833, 5089 |
| BslFI | GGGAC | 7 cut(s) | 483, 1198, 1387, 2771, 3322, 3989, 4908 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 260, 261, 776, 1222, 1506, 2986, 4448, 4882, 5053 |
| BsmAI | GTCTC | 5 cut(s) | 1162, 2595, 3792, 4834, 4929 |
| BsmBI | CGTCTC | 1 cut(s) | 3792 |
| BsmFI | GGGAC | 7 cut(s) | 483, 1198, 1387, 2771, 3322, 3989, 4908 |
| BsmI | GAATGC | 2 cut(s) | 1999, 4369 |
| Bso31I | GGTCTC | 1 cut(s) | 1162 |
| BsoBI | CYCGRG | 2 cut(s) | 1826, 3039 |
| Bsp119I | TTCGAA | 2 cut(s) | 2521, 4705 |
| Bsp1286I | GDGCHC | 4 cut(s) | 637, 2392, 3142, 4300 |
| Bsp13I | TCCGGA | 1 cut(s) | 1645 |
| Bsp1407I | TGTACA | 3 cut(s) | 1072, 1768, 2304 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 5229, 5237 |
| Bsp19I | CCATGG | 1 cut(s) | 4192 |
| BspACI | CCGC | 7 cut(s) | 1081, 1612, 2808, 2909, 2944, 5225, 5234 |
| BspDI | ATCGAT | 1 cut(s) | 1734 |
| BspEI | TCCGGA | 1 cut(s) | 1645 |
| BspFNI | CGCG | 1 cut(s) | 5225 |
| BspMAI | CTGCAG | 3 cut(s) | 499, 3126, 3472 |
| BspMI | ACCTGC | 2 cut(s) | 3035, 3129 |
| BspPI | GGATC | 8 cut(s) | 400, 740, 1316, 1329, 1794, 1999, 4076, 5093 |
| BspT104I | TTCGAA | 2 cut(s) | 2521, 4705 |
| BspT107I | GGYRCC | 2 cut(s) | 5084, 5207 |
| BspTI | CTTAAG | 1 cut(s) | 3409 |
| BspTNI | GGTCTC | 1 cut(s) | 1162 |
| BsrDI | GCAATG | 6 cut(s) | 1767, 2991, 3135, 3803, 3983, 4423 |
| BsrFI | RCCGGY | 1 cut(s) | 2169 |
| BsrGI | TGTACA | 3 cut(s) | 1072, 1768, 2304 |
| BsrI | ACTGG | 6 cut(s) | 1114, 2057, 2356, 2910, 4259, 4458 |
| BssAI | RCCGGY | 1 cut(s) | 2169 |
| BssECI | CCNNGG | 5 cut(s) | 64, 2008, 3052, 4192, 4833 |
| BssSI | CACGAG | 3 cut(s) | 2112, 3600, 3816 |
| BssT1I | CCWWGG | 3 cut(s) | 64, 3052, 4192 |
| Bst2BI | CACGAG | 3 cut(s) | 2112, 3600, 3816 |
| Bst2UI | CCWGG | 6 cut(s) | 50, 1501, 3006, 3215, 4055, 4877 |
| Bst6I | CTCTTC | 6 cut(s) | 973, 1230, 2518, 2601, 3450, 4602 |
| BstAFI | CTTAAG | 1 cut(s) | 3409 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1727 |
| BstAUI | TGTACA | 3 cut(s) | 1072, 1768, 2304 |
| BstBAI | YACGTR | 1 cut(s) | 1523 |
| BstBI | TTCGAA | 2 cut(s) | 2521, 4705 |
| BstC8I | GCNNGC | 8 cut(s) | 452, 2119, 2171, 2484, 3126, 4432, 4793, 4891 |
| BstDSI | CCRYGG | 2 cut(s) | 2008, 4192 |
| BstFNI | CGCG | 1 cut(s) | 5225 |
| BstHHI | GCGC | 5 cut(s) | 327, 561, 1797, 3004, 4797 |
| BstMAI | GTCTC | 5 cut(s) | 1162, 2595, 3792, 4834, 4929 |
| BstMCI | CGRYCG | 1 cut(s) | 631 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 713, 1295, 1727, 1763, 1803, 3587, 3602, 3887 |
| BstNI | CCWGG | 6 cut(s) | 50, 1501, 3006, 3215, 4055, 4877 |
| BstNSI | RCATGY | 1 cut(s) | 4795 |
| BstSCI | CCNGG | 8 cut(s) | 48, 1499, 3004, 3213, 4053, 4832, 4875, 5087 |
| BstSFI | CTRYAG | 6 cut(s) | 376, 495, 562, 640, 3122, 3468 |
| BstSLI | GKGCMC | 1 cut(s) | 637 |
| BstUI | CGCG | 1 cut(s) | 5225 |
| BstV1I | GCAGC | 8 cut(s) | 224, 694, 1744, 2817, 3899, 3902, 3926, 4358 |
| BstV2I | GAAGAC | 4 cut(s) | 3021, 3327, 3768, 4637 |
| BstX2I | RGATCY | 6 cut(s) | 392, 697, 1321, 1567, 1786, 2004 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 4199, 4907 |
| BstYI | RGATCY | 6 cut(s) | 392, 697, 1321, 1567, 1786, 2004 |
| Bsu15I | ATCGAT | 1 cut(s) | 1734 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1278, 3684 |
| BsuTUI | ATCGAT | 1 cut(s) | 1734 |
| BtgI | CCRYGG | 2 cut(s) | 2008, 4192 |
| BtgZI | GCGATG | 1 cut(s) | 1650 |
| BtsI | GCAGTG | 3 cut(s) | 795, 3957, 4441 |
| BveI | ACCTGC | 2 cut(s) | 3035, 3129 |
| Cac8I | GCNNGC | 8 cut(s) | 452, 2119, 2171, 2484, 3126, 4432, 4793, 4891 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3635 |
| CfoI | GCGC | 5 cut(s) | 327, 561, 1797, 3004, 4797 |
| Cfr10I | RCCGGY | 1 cut(s) | 2169 |
| ClaI | ATCGAT | 1 cut(s) | 1734 |
| CseI | GACGC | 2 cut(s) | 3809, 5231 |
| DraI | TTTAAA | 3 cut(s) | 1051, 1470, 2217 |
| DraIII | CACNNNGTG | 3 cut(s) | 44, 335, 1546 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 477 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 477 |
| EaeI | YGGCCR | 3 cut(s) | 1093, 2167, 5192 |
| Eam1104I | CTCTTC | 6 cut(s) | 973, 1230, 2518, 2601, 3450, 4602 |
| EarI | CTCTTC | 6 cut(s) | 973, 1230, 2518, 2601, 3450, 4602 |
| EciI | GGCGGA | 1 cut(s) | 2924 |
| Ecl136II | GAGCTC | 1 cut(s) | 3140 |
| Eco130I | CCWWGG | 3 cut(s) | 64, 3052, 4192 |
| Eco147I | AGGCCT | 2 cut(s) | 2509, 5164 |
| Eco24I | GRGCYC | 2 cut(s) | 2392, 3142 |
| Eco31I | GGTCTC | 1 cut(s) | 1162 |
| Eco32I | GATATC | 2 cut(s) | 145, 3211 |
| Eco47I | GGWCC | 5 cut(s) | 1643, 3970, 4922, 4982, 5129 |
| Eco53kI | GAGCTC | 1 cut(s) | 3140 |
| Eco57I | CTGAAG | 6 cut(s) | 417, 1311, 1704, 2582, 3546, 3585 |
| Eco72I | CACGTG | 1 cut(s) | 1523 |
| Eco81I | CCTNAGG | 2 cut(s) | 1278, 3684 |
| Eco88I | CYCGRG | 2 cut(s) | 1826, 3039 |
| EcoICRI | GAGCTC | 1 cut(s) | 3140 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4982, 5056 |
| EcoRI | GAATTC | 1 cut(s) | 84 |
| EcoRII | CCWGG | 6 cut(s) | 48, 1499, 3004, 3213, 4053, 4875 |
| EcoRV | GATATC | 2 cut(s) | 145, 3211 |
| EcoT14I | CCWWGG | 3 cut(s) | 64, 3052, 4192 |
| EcoT38I | GRGCYC | 2 cut(s) | 2392, 3142 |
| ErhI | CCWWGG | 3 cut(s) | 64, 3052, 4192 |
| Esp3I | CGTCTC | 1 cut(s) | 3792 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3576, 3608 |
| FaqI | GGGAC | 7 cut(s) | 483, 1198, 1387, 2771, 3322, 3989, 4908 |
| FauI | CCCGC | 1 cut(s) | 1088 |
| FauNDI | CATATG | 2 cut(s) | 1371, 2496 |
| FbaI | TGATCA | 2 cut(s) | 3637, 4026 |
| FblI | GTMKAC | 1 cut(s) | 935 |
| FriOI | GRGCYC | 2 cut(s) | 2392, 3142 |
| FseI | GGCCGGCC | 1 cut(s) | 2173 |
| FspBI | CTAG | 9 cut(s) | 65, 192, 597, 651, 966, 1140, 1655, 3609, 4467 |
| GlaI | GCGC | 5 cut(s) | 326, 560, 1796, 3003, 4796 |
| GsuI | CTGGAG | 3 cut(s) | 1775, 3236, 4242 |
| HapII | CCGG | 4 cut(s) | 1646, 2170, 4833, 5089 |
| HgaI | GACGC | 2 cut(s) | 3809, 5231 |
| HhaI | GCGC | 5 cut(s) | 327, 561, 1797, 3004, 4797 |
| Hin6I | GCGC | 5 cut(s) | 325, 559, 1795, 3002, 4795 |
| HinP1I | GCGC | 5 cut(s) | 325, 559, 1795, 3002, 4795 |
| HincII | GTYRAC | 4 cut(s) | 317, 3155, 3169, 5094 |
| HindII | GTYRAC | 4 cut(s) | 317, 3155, 3169, 5094 |
| HindIII | AAGCTT | 2 cut(s) | 1859, 2831 |
| HpaI | GTTAAC | 2 cut(s) | 3169, 5094 |
| HpaII | CCGG | 4 cut(s) | 1646, 2170, 4833, 5089 |
| HphI | GGTGA | 8 cut(s) | 692, 836, 1133, 1256, 3265, 3718, 4031, 4553 |
| Hpy99I | CGWCG | 1 cut(s) | 2203 |
| HpyCH4IV | ACGT | 4 cut(s) | 1522, 2042, 2201, 4219 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 713, 1295, 1727, 1763, 1803, 3587, 3602, 3887 |
| HpySE526I | ACGT | 4 cut(s) | 1522, 2042, 2201, 4219 |
| HspAI | GCGC | 5 cut(s) | 325, 559, 1795, 3002, 4795 |
| Kpn2I | TCCGGA | 1 cut(s) | 1645 |
| KpnI | GGTACC | 1 cut(s) | 5088 |
| KroI | GCCGGC | 1 cut(s) | 2169 |
| KroNI | GCCGGC | 1 cut(s) | 2171 |
| Ksp22I | TGATCA | 2 cut(s) | 3637, 4026 |
| KspAI | GTTAAC | 2 cut(s) | 3169, 5094 |
| LmnI | GCTCC | 7 cut(s) | 98, 1803, 2082, 3601, 3749, 4261, 4303 |
| Lsp1109I | GCAGC | 8 cut(s) | 224, 694, 1744, 2817, 3899, 3902, 3926, 4358 |
| MaeI | CTAG | 9 cut(s) | 65, 192, 597, 651, 966, 1140, 1655, 3609, 4467 |
| MaeII | ACGT | 4 cut(s) | 1522, 2042, 2201, 4219 |
| MaeIII | GTNAC | 7 cut(s) | 1031, 1037, 1105, 1244, 1337, 3184, 3724 |
| MflI | RGATCY | 6 cut(s) | 392, 697, 1321, 1567, 1786, 2004 |
| MhlI | GDGCHC | 4 cut(s) | 637, 2392, 3142, 4300 |
| MlyI | GAGTC | 7 cut(s) | 1016, 2753, 3089, 3399, 3556, 3702, 3973 |
| MmeI | TCCRAC | 8 cut(s) | 351, 370, 1470, 1886, 2877, 3264, 3533, 4505 |
| MroI | TCCGGA | 1 cut(s) | 1645 |
| MroNI | GCCGGC | 1 cut(s) | 2169 |
| MroXI | GAANNNNTTC | 2 cut(s) | 84, 2571 |
| MslI | CAYNNNNRTG | 5 cut(s) | 186, 2997, 3731, 4878, 4905 |
| MspA1I | CMGCKG | 4 cut(s) | 275, 2808, 2944, 5236 |
| MspCI | CTTAAG | 1 cut(s) | 3409 |
| MspI | CCGG | 4 cut(s) | 1646, 2170, 4833, 5089 |
| MspR9I | CCNGG | 8 cut(s) | 50, 1501, 3006, 3215, 4055, 4834, 4877, 5089 |
| Mva1269I | GAATGC | 2 cut(s) | 1999, 4369 |
| MvaI | CCWGG | 6 cut(s) | 50, 1501, 3006, 3215, 4055, 4877 |
| MvnI | CGCG | 1 cut(s) | 5225 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 713, 1295, 1727, 1763, 1803, 3587, 3602, 3887 |
| NaeI | GCCGGC | 1 cut(s) | 2171 |
| NciI | CCSGG | 2 cut(s) | 4834, 5089 |
| NcoI | CCATGG | 1 cut(s) | 4192 |
| NdeI | CATATG | 2 cut(s) | 1371, 2496 |
| NgoMIV | GCCGGC | 1 cut(s) | 2169 |
| NmeAIII | GCCGAG | 1 cut(s) | 2147 |
| NmuCI | GTSAC | 6 cut(s) | 1031, 1037, 1244, 1337, 3184, 3724 |
| NspI | RCATGY | 1 cut(s) | 4795 |
| NspV | TTCGAA | 2 cut(s) | 2521, 4705 |
| OliI | CACNNNNGTG | 1 cut(s) | 3731 |
| PaeI | GCATGC | 1 cut(s) | 4795 |
| PaeR7I | CTCGAG | 2 cut(s) | 1826, 3039 |
| PaqCI | CACCTGC | 1 cut(s) | 3035 |
| PceI | AGGCCT | 2 cut(s) | 2509, 5164 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2119, 4069 |
| PctI | GAATGC | 2 cut(s) | 1999, 4369 |
| PdiI | GCCGGC | 1 cut(s) | 2171 |
| PdmI | GAANNNNTTC | 2 cut(s) | 84, 2571 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2986, 4882 |
| PfoI | TCCNGGA | 2 cut(s) | 48, 3213 |
| PleI | GAGTC | 7 cut(s) | 1015, 2753, 3089, 3399, 3555, 3701, 3972 |
| PmaCI | CACGTG | 1 cut(s) | 1523 |
| PmlI | CACGTG | 1 cut(s) | 1523 |
| PpsI | GAGTC | 7 cut(s) | 1015, 2753, 3089, 3399, 3555, 3701, 3972 |
| Ppu21I | YACGTR | 1 cut(s) | 1523 |
| PpuMI | RGGWCCY | 1 cut(s) | 4982 |
| PsiI | TTATAA | 3 cut(s) | 2348, 2613, 3086 |
| Psp124BI | GAGCTC | 1 cut(s) | 3142 |
| Psp5II | RGGWCCY | 1 cut(s) | 4982 |
| Psp6I | CCWGG | 6 cut(s) | 48, 1499, 3004, 3213, 4053, 4875 |
| PspCI | CACGTG | 1 cut(s) | 1523 |
| PspGI | CCWGG | 6 cut(s) | 48, 1499, 3004, 3213, 4053, 4875 |
| PspPPI | RGGWCCY | 1 cut(s) | 4982 |
| PspXI | VCTCGAGB | 2 cut(s) | 1826, 3039 |
| PstI | CTGCAG | 3 cut(s) | 499, 3126, 3472 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3635 |
| PsuI | RGATCY | 6 cut(s) | 392, 697, 1321, 1567, 1786, 2004 |
| PvuII | CAGCTG | 1 cut(s) | 275 |
| RigI | GGCCGGCC | 1 cut(s) | 2173 |
| RseI | CAYNNNNRTG | 5 cut(s) | 186, 2997, 3731, 4878, 4905 |
| SacI | GAGCTC | 1 cut(s) | 3142 |
| SbfI | CCTGCAGG | 1 cut(s) | 3126 |
| ScaI | AGTACT | 1 cut(s) | 1022 |
| SchI | GAGTC | 7 cut(s) | 1016, 2753, 3089, 3399, 3556, 3702, 3973 |
| ScrFI | CCNGG | 8 cut(s) | 50, 1501, 3006, 3215, 4055, 4834, 4877, 5089 |
| SdaI | CCTGCAGG | 1 cut(s) | 3126 |
| SduI | GDGCHC | 4 cut(s) | 637, 2392, 3142, 4300 |
| SfcI | CTRYAG | 6 cut(s) | 376, 495, 562, 640, 3122, 3468 |
| Sfr274I | CTCGAG | 2 cut(s) | 1826, 3039 |
| SfuI | TTCGAA | 2 cut(s) | 2521, 4705 |
| SinI | GGWCC | 5 cut(s) | 1643, 3970, 4922, 4982, 5129 |
| SlaI | CTCGAG | 2 cut(s) | 1826, 3039 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 186, 2997, 3731, 4878, 4905 |
| SmlI | CTYRAG | 6 cut(s) | 1826, 1877, 2761, 3039, 3409, 3759 |
| SmoI | CTYRAG | 6 cut(s) | 1826, 1877, 2761, 3039, 3409, 3759 |
| SphI | GCATGC | 1 cut(s) | 4795 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3126 |
| SseBI | AGGCCT | 2 cut(s) | 2509, 5164 |
| SsiI | CCGC | 7 cut(s) | 1081, 1612, 2808, 2909, 2944, 5225, 5234 |
| SspI | AATATT | 4 cut(s) | 521, 2092, 2686, 3090 |
| SspMI | CTAG | 9 cut(s) | 65, 192, 597, 651, 966, 1140, 1655, 3609, 4467 |
| SstI | GAGCTC | 1 cut(s) | 3142 |
| StuI | AGGCCT | 2 cut(s) | 2509, 5164 |
| StyD4I | CCNGG | 8 cut(s) | 48, 1499, 3004, 3213, 4053, 4832, 4875, 5087 |
| StyI | CCWWGG | 3 cut(s) | 64, 3052, 4192 |
| TaiI | ACGT | 4 cut(s) | 1525, 2045, 2204, 4222 |
| TatI | WGTACW | 4 cut(s) | 1020, 1072, 1768, 2304 |
| TauI | GCSGC | 3 cut(s) | 2947, 5228, 5236 |
| TseFI | GTSAC | 6 cut(s) | 1031, 1037, 1244, 1337, 3184, 3724 |
| TseI | GCWGC | 8 cut(s) | 212, 707, 1757, 2805, 3887, 3890, 3939, 4346 |
| Tsp45I | GTSAC | 6 cut(s) | 1031, 1037, 1244, 1337, 3184, 3724 |
| TspGWI | ACGGA | 4 cut(s) | 1334, 2584, 3721, 3762 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2986, 4882 |
| Vha464I | CTTAAG | 1 cut(s) | 3409 |
| VneI | GTGCAC | 1 cut(s) | 633 |
| VpaK11BI | GGWCC | 5 cut(s) | 1643, 3970, 4922, 4982, 5129 |
| XbaI | TCTAGA | 2 cut(s) | 650, 4466 |
| XceI | RCATGY | 1 cut(s) | 4795 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4327 |
| XhoI | CTCGAG | 2 cut(s) | 1826, 3039 |
| XmaJI | CCTAGG | 1 cut(s) | 64 |
| XmiI | GTMKAC | 1 cut(s) | 935 |
| XmnI | GAANNNNTTC | 2 cut(s) | 84, 2571 |
| XspI | CTAG | 9 cut(s) | 65, 192, 597, 651, 966, 1140, 1655, 3609, 4467 |
| ZrmI | AGTACT | 1 cut(s) | 1022 |